>input_sequence_75625
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---------------------------------------------------------------ATGGCGGAGGAGCGGGA
GGAGGCGGGCGTGGCGCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGTTCAGGG
GCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATG
GCCGCCGCCGCGTACGACGTCGCCGCATTGGCGCTGCGGGGCGCCCAGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGA
GGCGCTGACGCGGCCCGCGCCGGTCTCGGGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCGGCTGCGGCAATGGTTG
TCGACGCCGGCGGCAGC---------------------------------TCCGGGAGCTGCGGTGCGGGTGAACAGGGC
CGCGTCGTGGACGAGGATGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCC
GAGGCTGGGCGCGGCGACGGCGGTGGACGACGACCAGGATGGCAGCATGAGCTTGTGGGAGCACTCCTGAGATTCTCTTC
TCCT--------GTGTAGCCGGTGTGTTGCACAT----------------------------------------------
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>chr5A_1_TraesCS5A01G523700
ATTCTCTTCTTTCTATGATTGCCATTAGTGATCATGTGAAAGAATTGAGTATTTGCGTCCCCCTGAACGACTTTGCGAAC
CTTAGCCCGCAAAGCCCACTTCAATTCCTCTTCACGGAGAAGCTCTTTCAATATCATCTCCGCCTCAAGCTTTGCATGAA
GCTCCGTGGCAGGAAGAATCGTGGACTCGGCTTTGAGGTCCAGGGATTGAATAAGTGTAAGGAGCCTCTTCTTTTCAACC
TTATACATCCCACTAAGATTCTTAGCCCACCCACGCAAAAAACTTCTCAAGTGTCTCAACTTATTCTGCCAACGCTCGAC
CGCAGTCCTACCTCCTGCACCCTTAGCCCATTCCCTGGCTACCAGATCCAAGAAGCCTAAACTTTCTCACATGCCTAAAC
TTTGTCTTTTTTTGTCACGAGCTTCTTGAATGTCCGAACTTCATCAAATTTTGCAAGGACATCACGCACATGACCATTTT
GCACCACAAGAAAATTAGATTTTTTTTGAATTTTTTGCTATTTTAATAACCTCTGCCCCTTCATCCCTTCC-ATCTTCCC
TGTGGTGGATTATGATCATGCATGGTACTGTCGTCGGTCGGGGCTCCGGTAGAACGAGTCAACCTGACAGTGATCCTCTG
ACCCACT-AAACTATCCCCAGTCAACCGGAGTGACACTGACAGATCAACACGTGTGCTCACCGGATATTCTTAACAGACC
TGTAAAGGCGACGCACTAATGACATTCTTAACAACCTAGGACGGTCCCGACGTGGCGGCTCGCCATTCGACCACCCGCCA
AGAAAGATCATCTGAACTTTATGCTCTCTTGTGCTCCCC-----AGCTAATCCCTAGCAAAGGAAGCAACCAGGAGAGA-
---CGCGTCCCTGAAATTCTTTCCTGTTTCTCACCGCCATTGG-------CACCACCGGCCACTCTGTTTTTAAACCCTC
GCCGTGATCCGGGTATCATCACACAATCACGGCCTGCAACTGCCATTGTCGTGT-----GCGGATGGCGGAGGAGCGGGA
GGAGGCGGGCGTGGCGCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGTTCAGGG
GCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATG
GCCGCCGCCGCGTACGACGTCGCCGCATTGGCGCTGCGGGGCGCCCAGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGA
GGCGCTGACGCGGCCCGCGCCGGTCTCGGGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCGGCTGCGGCAATGGTTG
TCGACGCCGGCGGCAGC---------------------------------TCCGGGAGCTGCGGTGCGGGTGAACAGGGC
CGCGTCGTGGACGAGGATGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCC
GAGGCTGGGCGCGGCGACGGCGGTGGACGACGACCAGGATGGCAGCATGAGCTTGTGGGAGCACTCCTGAGATTCTCTTC
TCCT--------GTGTAGCCGGTGTGTTGCACATGCACTAGTACGAAACTTGAACGGGAAGACATAGCACACAAGTACAG
AGAGCTGTGCGAATTTTGCGGTTCCCCTTATCGATACGTGGCATGATGATCTCGTCGCATTGGTCATCCGTCCAGTCCAG
GATATGCCATCGGTTACAAATACACAAACTAAGGGAAGCGACCCGCAAATTTCTTCCATGTCCGTTCACGGGGACACGGA
TGAAGAAGACCGCCATCCAACGTTAACATGTATATGTTCATCAGTAAAGTACAATTTTAAATTCAAATTAGTCCAATCCA
CACGGCACATTGGATCACATCAGTGCCAGATCACATGCCGGATCACAACCAAAAAAGGGCAAGTATGGCGATGTCCGCCA
CGACCACCGCGGCCACCACCCAACCGCCTCTTGAGTTTCTCCTATTTTGCGGCCTTTGCTTTGACGCAGCGAGTTTACGC
GCGTAGCCGAGCTGATTTTCTGGGCGAGCCTGATGTTTGGATCCTCCGGCACCTTCATCGTCTTCATCTTCGATGGTTCT
ATGCGTCAGCGGCGGAAGAAAGGAGAGGTTGGGAGAAAAGAGCGAGAATTGGATGGAGAGCGGCAGGGGATGGACAAAAA
AAGTGAGGGATTTTGACGCGAATATGCAGGTTGCTACAAAAGTGTGGACTCTACCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCGCGTGTCCGGACTCCCGCGACACCTCCCCCCTGTTG
GGTTCTACGCTAGGTGCATTGACTACAAAATAAATTTTTTTACGCGTAAAACAATTGGGAACATACTACAGGAA
>chr4B_532
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---------------------------------------------------TCTCCCCCTTGACCCCTTTCAATCTTCCC
CGTGGTGGATTATGATCATGCATGGTACTGTCGTCGGTCGGGGCCCCGGTAGAACGAGTCAACCTGACAGCGATCCTCCG
ACCCAGTAAAACTATCCCGAGTCAACCAGAGTGACACTGACGGATCAACACGTGTGCTCACCGGCTATTCTCAACAGACC
TGTAAAGGCGACGCACTAATGGCGTTCTTAACAACCTAGGACGGCCCCGACGTGGCGGCTCGCCGTTCGACCACCGGCGA
ACAAAGATCATCTGAACTTTTGGCTCTCTCGTGCTCCCCAGCTAAGCTAATCCCTAGCCAAGGAAGCAACCCGGAGAGAG
AGACGCGTCCCAGAAATTCTTTCCAGTTTCTCGCCGCCATTGGCATGCACCACCGGCCTCCCCTGTGCTTTTAAACCCTC
GCCGTGATCCGACTAGCATCATCACACGACACAATTAC---GCCATTGTTGTGTGCGGAGCGGATGGAGGAGGAGCGGGA
GGAGGCGGGCGTGGCGCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGCTCAGGG
GCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATG
GCCGCCGCCGCGTACGACGCCGCCGCATTGGCGCTGCGGGGGGCCCGGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGA
GGCGCTGTCGCGGCCCGCGCCGGCGTCGTGCGCGCCGGACGACATACGGGCGGCCGCGGCCGCAGCCGCGGCGATGGTTG
TCGATGCCGGCAGCTCTCCTCGGACGGAGGCTGATGGCGGCCGCTCCGGGTCCGGGAGCTGCGGCGCGGGTGAACAGGGC
CCCGTCGTGGACGAGGACGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCC
GAGGCTGGGCGCGGCGACGGCGGTGGACGACGACCACGATGGCGGCATGAGCTTGTGGGAACACTCTTGAGTTTCTCTTC
TTTCTCCTGTGGGTGTAGCTGGTCTGTTGCACTTGCACTAGTACGAAACTTGAACGAGCAGACACAGCACACAAGTACAG
A--GCTGCGCGAACTTTGCGGCTCCCCTTATCGATACGTGGCAAGTTGATCTCGTCATATTGGTTATCCGTCCAGTCAAA
GATA----------------------------------------------------------------------------
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>chr4D_543
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--------------------------------------------------------------ATCCCTTTC-ATCTTCCC
TGTGGTGGATTATGGTCATGCATGATACTGTCGTCGGTCGGGGATCCGGTAGAACGAGTCAACCTGACAGTGATCCTCTG
ACCCAGT-AAACTATCCCCAGTCAACCGGAGTGACACTGACAGATCAACACGTGTGCTCACCGGCTATTCTCAACAGACC
TGTAAAGGCGACGCACTAATGACATTCTTAACAACCTAGGACGGCCCCGACGTGGCGGCTCGCCATTCGACCACCCGCCA
AGAAAGATCATCTGAACTTTTGGCTCTCTCGTGCTCCCCAGCTAAGCTAATCCCTAGCCAAGGAAGCAACCCGGAGAGA-
---CGCGTCCCAGAAATTCTTTCCAGTTTCTCACCGCCATTGG-------CACCGGCCTCCCCTGTGCTTTTAAACCCTC
GCCGTGATCCCAGTAGCATCATGACAA-------------------------GT-----GCGGATGGAGGAGGAGCGGGA
GGAGGCGGGCGTGGCGCTGACGGGGAGGCGGGCGCGGGCGGACACGAGGCACCCGGTGTACCGGGGCATCCGGTTCAGGG
GCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGGGCAAGGCCAGCAGGATCTGGCTGGGCACGTACCGGACGCCCGAGATG
GCCGCCGCCGCCTACGACGTCGCCGCATTGGCGCTGCGGGGCGCCCGGGCCGCCGGCCCCGCGCTCAACTTCCCCGGCGA
GGCGCTGTCGCGGCCCGCGCCGGCGTCGTGCGCGCCTGACGACATACGGGCGGCCGCGGCCGCGGCCGCGGCGATGGTTG
TCGATGCCGGCGGCC------------------------------CCGGGTCCGGGAGCTGCGGCGCGGGTGAACAGGGC
CGCGTCGTGGACGAGGACGACGTCTTCGAGATGCCGCGGCTGCTGGCGAGCATGGCGGAGGGGCTGATGATGAGCCCGCC
GAGGCTGGGCGCGGCGACGGCGGTGGACGACGACCACGATGGCGGCATGAGCCTGTGGGAACACTCTTGAGATTCTCTTC
TCCT--------GTGTAGCTGGTGTGTTGCACTTGCACTAGTACGAAACTTGAACGGGCAGACATACACACGAGTGC---
AGAGCTGTGCGAACTTTGCGGTTCCCCTTATGGATACGTGGCATGTTGATCTCGTCATATTGGTCATTCGTCCAGTCCAA
GATA----------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------S-------S----------
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-----S----------------------------------------------------------S------S--------
--------------------------------------------S-----------------------------------
--------------------SS-------S----------------------------S------------S--------
-----------S------------S-----------------------------SS-SS--S--S--S------------
-----------S---S-----SSSS-SS--SSSS-SSSSSS--------S-----------------S------------
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----------------------------------------------S---------------------------------
-------S---------------SS---S-------------------------------------S-----S-------
----S---------SSS-----------------------------------------------S---------------
-----------------S--------------------------------------------------------------
------------------------------------S------S----------------S-----S-------------
-------------------S------------S-------------------------S---------------------
-------------S-------------------------------S----------SS---------------------S
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_185
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-----GTGGCAGGAAGAATCGTGGA-------------------------------------------------------
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>reverse_1916
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---------------------------------------------------------------------------ATCCA
CACGGCACATTGGAT-----------------------------------------------------------------
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