>input_sequence_75579
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-----CAACC--------CGAG--CAAG----CAAGCAAAGCCAATTGATTGAGTTGAAGCAAAGTTACAGA--------
----GCGTGCCCGCAAGAAAGCATCGGCCACCGGAGCAGCTGCAG-------------------GAA--------TCATC
CCCGTCTCCAACCAATCAAGCATGGAGAAGGTGTTAGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACATCGCCGCCGG
CGCCGGCGCCGGGGCCA------------GC------TGGG---------CTCGGTTCTCCT------GGCAGGGGAGGA
AGCTGCAG------------GAC---GACGGCCAGGCCAG---AGCAGGGCAAGAGGGGAAGCAGGGCGGTCCACCGTCG
GAGGCGGAGCAGCAGCCGGACAAGGGGAGAT---------CGCCGACGTTGCGGCCGCGGTTCGCGCCGGAGTTCGACGG
GATCGACTGCTTCGAGACCATCGTGTGCCACTGATC----AG---CG------AGTGAATCACGAGCTGCTCTGCTCGTG
GTCCAGCCGCGCGTGT--GTGCGAGACTA----ATTATTTCTTCGTCTGAT--CACCGTATGATCGGCGTGTTCATTT--
GTTGTTCAC--TTG---TGCTTCTGACTGAAGCCGCGTGTTGTACAGAATACAGAGCTA-----TAAAGAAACCCATTTC
GC------------------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G403900
CCTCCCCGCGCGCAGCCGCCGGATTCGAGCCGCACACCCGCCGCCGCTGCTTTCTGTCGCCCGACTCAACCTTCTCTCTC
CGCACGACCGTTGCACCACCGCGACCAATCTGCCACTCAATTCACAGCCGTGCCCCCGGCCATTAGAGCTCCTGCGGCCG
CTTGCTGCCGCCCGACTCAACCTTCTCTCGCCGCATGACCGTCGCACCGCCGCGACCAATCCGCCACTCAATTCACAGCC
GTGCCGCCGGCCATTCGAGCTCCCGCCGCCGCATTCGACCTCGCGGCTCTTGTCGCTCGGCCTTCATAAGTCGATCAATG
CAGCCCCGACACATG-----------------------------------------------------------------
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------------------------------------------------------AATGGTTCTTCGTAAGGCGTTTCATC
CCGGTTGAGTCGACTCCACCTTCTCAATAGTGACAAGACGTATTGTCCGAATATCGGTGGTCTCACCTTCTTCGAACAAC
CAATAGAGGCAAGCATCTCCTCCTCCCATGATGTCCCCGCCGCTTACTCTGCTCCAGAGCGAGCATTCGATGTCCATCCT
CTTTTCATGTGGTG--TTTTTTAGAAAACTCTCTTCAT------------------------------------------
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-----------------------------GTAGTAATAATATTGGTTAATATACTAGTGCTA------------------
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------------------------------------------------TACTAAAG------------------------
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-------------------------GGGTCAGGTTAAAATTTCGCACCGGCACCTCAAAATCTCAGGAACGGCTCTGTAT
CTAGCATGGCTCTCGAAGCCTGGGCGTCATGCGATTTGATCGTTTTGTGAGAAAAAAATAGATTGGGATTTTTTCGCGCT
AAAGTGTTACC---------------------------------------------------------------------
---------AAGTGCCAGGTTTGTCAGTTTTCGCGGGCAGACAAAGCAGCACAGGAGGAAAAGAAGATAAACACGCGCGA
AAGCCCGAAACA---------GCGAGACGGTTG----CAACCTCCACGACGCCACCGCGTGCGTCACGA-----------
G---------------GCTCTCCCTCGCAGCCGCGTCCACGAATATT----CTGGACTCCTCCAGCGC----TACAAACC
GCCATGACCAAATCTT------CG-ACCATGACC---ATACTCCGCCGTATATAAGCCGGGTCGCGTTCCC-TCTC--CT
TTCACCAACC--------CGAG--CAAG----CAAGCAAAGCCAATTGATTGAGTTGAAGCAAAGTTACAGA--------
----GCGTGCCCGCAAGAAAGCATCGGCCACCGGAGCAGCTGCAG-------------------GAA--------TCATC
CCCGTCTCCAACCAATCAAGCATGGAGAAGGTGTTAGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACATCGCCGCCGG
CGCCGGCGCCGGGGCCA------------GC------TGGG---------CTCGGTTCTCCT------GGCAGGGGAGGA
AGCTGCAG------------GAC---GACGGCCAGGCCAG---AGCAGGGCAAGAGGGGAAGCAGGGCGGTCCACCGTCG
GAGGCGGAGCAGCAGCCGGACAAGGGGAGAT---------CGCCGACGTTGCGGCCGCGGTTCGCGCCGGAGTTCGACGG
GATCGACTGCTTCGAGACCATCGTGTGCCACTGATC----AG---CG------AGTGAATCACGAGCTGCTCTGCTCGTG
GTCCAGCCGCGCGTGT--GTGCGAGACTA----ATTATTTCTTCGTCTGAT--CACCGTATGATCGGCGTGTTCATTT--
GTTGTTCAC--TTG---TGCTTCTGACTGAAGCCGCGTGTTGTACAGAATACAGAGCTA-----TAAAGAAACCCATTTC
GCCGTGATTATTTGGA--TAAGCTTTGGTTTCTAAGGCTTGA-----CGTCGTGACGGAGCAGAGATGTTCAGTCAGACG
TACTAATCCAGAACTGGAACCGCCCAACCCGAAAAGTGGCGGACACGTGCGAGCTACAGCTCGC-TAGATGTCCAAACTA
CCCTCACACTGAAACCGCAGCTTGCTACACCACCCAAGAACCAGCACACG--CGTCACGTAGAGGAGGGCTTGCCGTGGT
ACACCTGCAGCTCGGCCCCACATGGCAGTGAGTTGGAAGC-------GGCCTCACGAGACTCGCAGCTATCCCCTCATAA
AAAGGGATTGAGGACCATGTTTTTTTATTGCCTGAATTATTTAGCATATGTGTCGCGTGGTAAGGGATCGAAGGCCCATT
TAACGGCAATTTAAGCATAGTCTTTTTTAACCCTGTATAGATCCAAGTGCTCGTATACACGCGCATACACTCACCCTTAT
AAACGCACACATATACCCTACCTCTATGAGCATCTTCGCGCATACACTCATCCCTATATACGCACACATATACCCTACCT
CTATGAGCATCTTCGAAAGACTGAGCCGACAGATCATCTTGAAATTTACAAAGTCACAGTATGCACCTTGTCATCGACGG
GAACGTCTCCTCTCACTGAATGGACATAACACGAAATCCTGAAATAAATCCAGTAATAAATGCGAACACCAGGACTTGAA
TCCTACTGGACCGGGGATACCATAGTCCCTTTAACCATCCAACCACAAGTTGGTTCACATAGTCTAATACGTACTCGCTC
TATATTACAAAAACGTCATATATTATGAAACGGAGGGAGTAATAATTTTTCAGTCATACATACAATAAATAGGACATGAG
CATATAAGTATACTTGATGATCAATAGTCTCTTTAATTTAGGTGTCGCAGTCCGTCCGCTTCATCTCCGGTTGCCTTAGG
GCCATGGGACAGGAGTGGATCTCGGCCATTGCCGGTGGAAGGGCTTCATTTTTATATCT
>chr1A_309
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--------------------------------------------------------------------AGTCGATCAATG
CAGCTTCAACATATGGAATGGTTCTTGCTAAGGCGTTTCATCCCGGTTGAGTCGACTCTTCTTCGTCAATTCTCCGACTA
AGGTATGTGCCTTGTGAAAGTCCAATTAAGCGTCTTGATCTATCTCTATAGATCTTGATGCCCAATATATAAACAGCTTC
ACCGAGGTCTTTCATTGAAAAATTCTTATTCAAGTATCCTTTTATGCTATCCAGAAATCTATCTAGTTACTAAGCTCCCA
TGATTTCCTGGTCTCTGGTGGCTTGGGGTCGCGGAGGGCATTTTTTGGCCCATTTATGCTTTTTTTCTCGCTTGACACTA
ACAGCACGACGTGCAGCAGCCTTGTAACGTTCCTTGCCACTACACCACAAGCTGCATAGTCAATAATTAACCGCTCAATT
TACCGCCCTCGCAAAAAAAACCCCGCTTAATTTACTGCATGCAACGCTTAATGTTTTTATTAATGCTTAATTAATTAAAT
AAACAACAGATTATCTTATACTTATGAGCCAATTTATAAATCGGTCAGGACGGATGCCTCAGCAAACAAAAGTGCTCTGG
TTACGTGCATACTATACCAGTAAGATCATGCCTTGTGTCTTTAGAGGATCTCCAATAGAAGATGTAGGTGAAAAACTAAC
TAACTAACTTTTGCATCTTCATGGTCCAAAAAGCCACCTCCAATAAATGATGTAGATATAAAAAAAATACATCACCTGGC
CAAGTGATGTAAAATACAACACCTGAAGATGCAAATTTGCATCTCCACCTCCAGGTGATGTAAAACAGCTGGTCGCACGC
CAACCGTTTTTTATTTCTTTTCTCTCCATCGTGCGTCTTTTTCCTCCGACCACCGCGCGCCCACCCACTGCACCATGCCA
CCATCGCCCCGTGCTAGATTCGGCCACCAACCACCCCTGCTGCCGTTTTCGTGACTCCGCCGTTGCAGCCCGCCTCGAAT
CAGGCTCGATTCGCCACCTCCGTCATCGCTCGATTCTCCAGCACCGACATCCGATTCACCACCGCCAAGCCCCCGCCCCG
AGCCCACACCCTATCGCCGCCCGCCACCAAGCCCCCGCCCCGACCCCCACCCCACCACCTCCGTCGATTCGCCACCGTGA
AGACCCCGCCCCACCGTCGCCTGACACCAAGCCGCCACCCCGAGCCGCCACCCCACCGCCGTCGCCTGATTTTCCATCGC
AAAGCCCCAGCCTAGAGCCCCCACCTCACCACCGCCCGCCAGCAAGCCCCCGCCCCACGCCTCCCGTCACCAAGCCCCTG
CCCCGAGCCAACCAATTGTCACTGCTATAATTTAGCAATGATGCAATCCTTTTCACTGGATACTTTTATAAAATGCTTAA
ACATGATTGTCACTTCTATACTGCAATCCTTTTTTCCTGAAAAAAGGCACAACTAAATGACAATTACACACAACGAGCCA
ACCAATTGAAATAGACCACATACGAAATAAGCATAGGAAATTAACCCACGACCGAAGAATAGGCGCGGCAAAGCGCTATG
CTCTAGTTCTGTATTATTTCCAATCAACAATATGTCATCCACATATAATATTAGAAATGCTACAGAGCTCCCACTCACTT
TCTTGTAAATACAGCCTTCTCCAAAAGTCTGTATAAAACCATATGCTTTGATCACACTATCAAAGCGTATATTCCAACTC
CGAGAGGCTTGCACCAGTCCATAAATGGATCACTGGAGCTTGCACACTTTGTTAGCACCTTTAGGATCGACAAAACCTTC
TGGTTGCATCATGTGAGTATTTTCTCCCTCTTCTTCGTCGTGGCGTCGTCGAGCTTCGCATTGGCGGCATAGAGGACAGG
TCCAGGTGTGCTTATGGAGGTGGATCTGTGGATGTTGGAGAAGATTCATCGGAGATGGTGTTCTGTCCAATGTGCTATCC
TTCGTGGCCGAGGTTGGTAGACTTCCCGATCGTCTTGGCTGTCTTTGAAAGGATGTTTGCTCTGGCGACGGAGTGACAAC
GATGACAGCGCCTGCACCCCGCTCCGGCGAGAGTGTTCTTCGTTGTGTGGTCTGAGGACGTACTTGTAATTTTATTTACT
ATTGGGGTCCTTTGTACTATGGATGAATCTTCAGTATAATCCCGAGGTCTTTTCACAATTTTCTTATAAAATTATGGGTT
TGCTTTAGGATTTTTTGGGCAAAAACCCTTGACTTTACACAAATTCACACTAGCCAAGCTCCAAGTGCCCCAACTCATTC
ATGGGTAAGCTACCCCTTTCCCTACCATTCCTCCAATTCCCGAGTCTTTCTTCGAACATGGCAAAATTTTGATGTGACCT
CTATTATAATCCGGCTATGTCACCCTATTGAACTTGCTTTTAGAGCCTGATGCAAAGATTTAAAGGCTTTTCCCATCATT
ACAATGCATCATGGTGCATGGATTCCATTTAGTTTGTTTCTTCGGGCTTGTTTAGTTAGATGGGATCAACCAGGACTTTG
GTTTCATCCATTTGGATGAGTGGATCAGACCTCTCGCACCATTCTCATAGAAAAGATTTTTCACATTTGGAGGAGGCTGG
GGTGGGGAAGCTTTCGACCTAACTATAGTCGATCAATGCAGCTTCAACATATGGAATGGTTCTTGCTAAGGCGTTTCATC
CCGGTTGAGTCGACTCTTCTTCGTCA---------------ATTCTCCGACTAATGGTGGTCTCACGTCCTTC-AACGAC
CAGTTGAGGCAGGCATCTCCTTTTCCCGTGATGTTCCCGTCGCTTACTCTGCTCCAGAGCGAGCATCCGATGCCCATCCT
CTCTTCATGCAGTTTTTTCTTGAGAAAACTCTCTCCATGTCTCTCCCTAATAATAAAGTACGGATTGAGTCTCCGGGTTC
ACCGTTGCGGGGTTCACCGTCGCGGCGTTTTTATAAAAAAAAAGTCCCTTTGCTTTTCAAAAATAGAACCCGCAGTCCAA
AAATAAGTGAGAAAAATGATTCGATTGTGCCTTCTGGTTGCCCGGCTGTTTCAGTCCCCTATCGACTAAGTAGAACGAAA
AGGAAAAAAAAGTCTGATCCGACCTGATCGGACCAGCAGCGCTGGTGACGGCCATGGGCGCCGGTGGCCGGATCGGACCA
GCAGCGCTGGTGATGGCCATGGGCGCCGGTGGCCGGAGGGGAGGTACAAGGAGAAATGGCGCAAGAGGGAGATATGGAAT
GAAGGGAAGGGCTGCCCTGGCGGCGGCGGGTGCGCGCGTGTGGGATCGAGGCAGCAGCCCTCACCGGTGAGACCGCGGCC
ATGGCGCCAGTGGCCCAGCGGTTGGCGGCGGCGGGGTGCGCGCGCGCGTGGGAAGTGGGGTTCGAGCAGGTGCTCATCCC
CTCTCGCTAGGTTAGCGGTTAGCGGGGAGAACTGGGCCTGTCCTTGGGACCGGCTACTGTTGCTGCTGCGCTCATTGGGC
CGACCCACTGCGACTTTTTTTAGAGAATACCTTAGATGCAAAACGCTTGTGTTTGGACCAAGTCAAAATAATGCCAAAAA
ATACATTTCAATATTTAAAATTTTTATATAAATGTTCAATAAATCATAAAATGCTTATGGATTCAAAAATGTTTGTAATT
TTTTAAATTGTTAGAGTATTCAAAAAATGTTCGCATATTTTGAAAACAAATGTTTGGGAAAAATATTCATTATTTTAAAA
AAATCATGTATTAAAAAATATTAATGAAATTGAACAAAATGTTCGGCAAAATGTTATCGGTGATGCAAAAAAGAAGAAGT
TGTCATGGTCATTGGAGATTATGAATTTTTTTCTCCCGTTGCAACGTTAGATATATTGCTTACCTAATCTAGGGAATGGT
TGTATTTAATTATTCATGATTCAAAATGTTATATATTTTGTTCATGTAAATGCTTATTTTGCATTCTGCTCTAAAGCTTA
GGAAATGGTTGGCAATAGTTTTTGTGTCTAGGGTTCTTCTCCTTAGATTTTGATTGATATGTAAGGGCATACAGATGCAT
CAACTATTTAGATGTTTTTTTTTGAGATTCTGAACTTCAGGGGTGGGGTGTCTTTAGCCATGCTTATTGGATAAGGTTAG
GACCATGGGCTATTTTTTAAAACTCCCGCTGCAACGCACGCGCATGTTTGCTATGCTATAAAAAACACTAATCTGCTTAA
CCTTATTATCGATGTTTATTAAAATTGGATATATAAAATGGTGCATAATGGAAAATGAAGCCGGTTGTGTCCCTTTTTTG
CCCGGTGCAACGCACGGGCATTTGTGCTAGTAGTAATAATATTGATCAGTATTCTAGTGTTA------------------
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------------------------------------------------TATTAACAGAAATCCTATCTAGCAATCGTTCG
CTGGGAGAGGGGTGACAAACGAACTTTTTTTATGGCAGTTTTAGTTCTGAGAAGAGATCAAATGGTGGCAGTTTAAAAAA
ATTTGTCTTCTCTAACAAAAACTGCCACGTCGCTCTAAAGACTGTCACCCCTCACAAACTAAAAATGACAGTGAAATCAT
TCGCAAGTGAACATTCGCTAGCTAAGGGCCAGATTAAAATTTCGCCTTTGGCCTCCAAAATCTCCGGACCGGTT-TGTAT
CTCGTATGGCGCCCCAGGCCCGGACGTCATGGAAATTGGCCATTTTGTGATGAAATTTTGAATTAGATTCATTTTATGCC
AAAGTTT-------------------------------------------------------------------------
----TAGAAAAGTGCCAGGTTTATCAATTTTCGCGGGTAGGGAAAGCAGCCCAGGAGGAAAAGAAGATAAACACGCGCGA
AAGCCCGAAACC---------GCGAGACGGTTG----CAACCTCCACGACGCCACCGCGTGCGTCACGA-----------
G---------------GCTCTCCCTCGCGGCCGCGTCCACGAATATT----CTGGACTCCTCCAGCGC----TTGAAACC
GCCATGACCAAAACTT------TCCTCCATGTCG---ATGCTCCGCAGTATATAAGCCGGGTCGCGTCCCC-TCTCTCCT
TTCACCAACCCAAGCAAGCAAG--CAAG----CAAGCAAAGGCAATCGATTGA-TTGAAGCAAACTCAATAC--------
---AGCGTGCGTGCAAGAAAGCATCGGCCACCGGAGCAGCTGCAG-------------------GAA--------TCATC
CCCGTCTCCAACCGATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACATCGCCCCCGA
C------------GCCG------------GC------TGGG---------CTCGGTTCTCCT------GGCAGGGGAGGA
AGCTGCGG------------GAC---GACGGCCAGGCCAG---AGCAGGGCAAGAGGGGAAGCAGGGCGGTCCGCCGGCG
GGGGCGGAGCAGCAGCCGGACAAGGGGAAAT---------CGCCGGCGTTGCGGCCGCGGTTTGCGCCGGAGTTCGACGG
GATCGACTGCTTCGAGACCATCGTGTGCCACTGATGAGCGAG---CG------A---ATCA------CGAGCTGCTCGTG
GTCTGGCCGCGCGCGT--GTGTGAGACCA----ATTCTTTCTTGGTCTGAT--CACCGTATGATCGGCGTGTTCATTTTG
GTTGTTAAC--TCC---TGCTTCTGACTGAAGCCGCGTGTTGCACAGAGTACAGAGAAA-----GAAAGAAACCCATTTC
GCCGTGATTATTTGGA--TAAGCTT-------------------------------------------------------
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>chr1D_450
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--------GCAAGCATCTCCTCTTCCCACGATGTCCCCGCCACTTTCTCTGCTCCAGAGTGAGCATTCGATGTCCATCCT
CTTTTCATCTAGTATTTTTTTTAGAAAACTCTATTCAT------------------------------------------
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-----------------------------GTAGTAATAATATTGGTTAGTATACTAGTGCTACTAGTGAGTTGTACGTGC
TTTGCACGTGAGTTGTTAGATATCGTTACAATACAATGTTGACAGACAACTAACAGTTACATATTACGTGTATGAAGTTC
AAGATACAAATTGGTTACTAATGATAGCCAAAACCATCGAAAAAGGAAACCTTAGCTGCATGGTGCTCCAATATGTGTAT
ATAACACATTATATGTATGGACCTTAAGTGTTGCAGCATTTGGTGAAAACTCTCTGAAAAGATATATGGACTGTAAGAAA
TTGTTGATCAGAAGTCTTTCATCTTGACTAAAAATTCGCAAGTAATCTCATAAATAGATACACTTTTATTCAAGCGAGAA
ACTCTACTGGAGCAATAGCACAACAAGAACTCTAATGGAGCAAGAGCATGCGCGAAAGATTCTAGAATAAATGAGAAGTT
TGTAAAGATAGTATATGTAATAAGTACAAGGGTGTACTATGTTTTTAATTATTGGAAACTTCTAGATATTACACATGGCA
GAATCTGATGTAATTGATAGGAAATCGAATGGTCAGCAATGCTTGGATTTGCCACCTCTTGACCGTCAGATTGAGTTCAT
CCAATGATCCATATTCAAACTTATTCTAACACTATATAGTGGTATGGATATTAAAG------------------------
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-------------------------GGATGAGGTTAAAATTTCGCACCGGTCCCTCAAAATCTCAGGTCCGGCTCTGTAT
CTAGCATGGCTCTCCAGGCCTGGGCATCATGCAATTTGACCATTTTGTAAAAAAAGCAGATTGG-----TTTTTTTAGCT
AAAGTATTCTACTCCGTTCCATAATGTAAGGCGTTTTTTAACACTACACTAGTATTAAAAGACGTTTTATATTATGGGAC
GGAGTAGAAAAATGTCAGATTTGTCGTTTTTCGCGGGCAGAGAAAGCACCACAGGAGAAAAAGAAGATAAACACGCGCGA
AACCACGAAACC---------GGGAGACGGTTG----CAACCTCCACGACGCCACCGCGTGCGTCACGA-----------
G---------------GTTCTGCCTCGCGGCCGCGTCCACGAATATT----CTGGACTCCTCCAGCGC----TAGAAACC
GCCTTGCCCAAAACTT------TC-TCCAAGACC---ATGCTCCGCCGTATATAAGCCGGGTCGCGTCCCCCTCCCTCCC
TTCACCAAGCCA----AGCGAG--CAAG----CAAGCAAAGCCAACTGATTGA-TTGAAGCAAAGCCATA----GAGCGT
----GCGTGCAAGAAAGAAAGCATCGGCCACCGGAGCCGCTGCAG-------------------GAA--------TCATC
CCCGCCTCCAACCAATCCAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACGTCGCACCCGG
C------------GCCGGCGC------CAGC------TGGG---------CTCGGTTCTCCT------GGCAGGGGAGGA
AGCTGCGG------------GAC---GACGAACAGGCCAG---AGCAGGGCAAGAGGGGAAGCAGGGCGGTCCGCCGGCG
GAGGCGGAGCAGGAGCCGGACAAGGGGAAA---------CCGCCGACGTTGCGGCCGCGGTTAGCGCCGGAGTTCGATGG
GATCGACTGCTTCGAGACCATCGTGTGCCACTGATGAG------------------------------------CTCGTG
GTCTAAGC---CGCGC--GTGTGAGACTT----GTTCTTTCTTCGTTCGAT--CACCGTACGATCAGCGTGTCCATTT--
GTTGTGAAC--TTG---TGCTTCTAACTGAAGCCGTGTGTTGTACAGAATACAGAGGTA-----GAATGAAACCCATTTC
GCTGTGATTATTTGGA--TGAGCTTTGGTTTTTAAGGCTTGA-----CGTCATGACGTAGCATAGATGTTCAGTCAA---
-ACTAATCCAGAAT---AACCGCCCAATCCGATAAGTGGTGGACACGTGTGAACTACAACTTTGATAGATGTCCAAACTA
CCCTCACACCG-AACCACAGCTTGCTACACCACCCAAGAACCAGCACACG--CGTCACGTAGAGGAGGGCTTGGTGTGGT
ACAACTGCAGCTCGGCCCCGCATGGCAGT---------------------------------------------------
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>chr3D_749
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-------------GCCAGAATTGTCAAGTTTCACGGGTAGAGAAGACAGCGCAGGAGGGAAAGAATATGGACACGGGCGA
AAC--------C---------GCGAGACGGTTGCAACCAACCTCCACCACGCCACCTCGTGCGTCACGAGCTCGCTCGCT
G---------------TTTCTTCCCCGCGGCCGCGTCCACGAATATT----CTGGGCTTCTCCAGCGC----TTGAAACC
GCCATGCCCAAAACTTAAACTTCC-TCCATGACC---ATGCTCCGCCGTATATAAGCCGGGTCGCGTCCCC-GCTCTCCC
TTCACCAAC---------------CAAG----CAAGCAAAACCAATTGATTGA-CTGAAGCAAAGTCACA----GAGCGA
GCGAGCGAGCGTGCAAGAAAGCATCGGCCACCGGAGCTGCTGCAG-------------------GAAGCCAGGAATCACC
CCCGTCT----CCAGTCGAGCATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACGTCGTCCCCGG
C------------GC------------------------------------TCGGTTCTCCTGGCAGCGGCAGGGGAGGA
AGCTGCGG------------GAC---GACGGCCAGGCTAG---AGCAGGGCAAGACGGGAAGCAGGGCGGTCTGCCGGCG
GAGGCGGAGCAGCAGCCGGACAAGGGGAAAT---------CGCCGATGTTGCGGCCGCGGTTCGCGCCGGAGTTCGACGG
GATCGACTGCTTCGGGACCATCGTGTGCCACTGAGC----AG---TG------A---ATCA------CTGGCTGCTCGTG
GTCTGCCCGCGCGCGT--GTGA--GACTC----ATTCTTTCATCGTTCGAT--CACCGTACGATCGGCGTGTTCATTT--
GCTGTTAAC--TTG---GGCTTCTAACTGAAGCCGCGTGTTGTACAGAATACAGAG-----GTATAAAGAAACCAATTTC
GCCATGATTATTTGGAGATGAGCTTTGGTTTTTTAGGATTGT-----CGTCATGACGGCGCAGAGATGTTCAGT------
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>chr3B_749
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-------------GCCAGAATTGTCAATTTTCACTGGTAGGGAAGACAGCACACGAGGGAAAGAATATAGACACGGGCGA
AAC--------C---------GCGAGACGGTTG----CAACCTCCGCCACGCCACCGCGTGCGTCACGAGCTCGCTCGCT
G---------------GTTCTCCCTCGCGGCCGCGTCCACGAATATC----CTGGACTCCTCCA----GCGCAAGAAACC
GCCATGCCCAAAACTT------CC-TCCATGACCGCCATGCCCCGCCCTACATAAGCCGGTTCGCGTCCCC-TCTCTCCC
TTCACCAACA-G----AGCAGG--CAAG----CAAGCAAAGCCAGTTGATTGA-TTGAAGCAAAGTCACA----GAGCGT
----GCGTGCGTGCAAGAAAGC-------------GCTGCTGCAG-------------------GAAGCCAGGAATCACC
CCCGTCT----CCAATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACGTCGCCCCCGG
C------------GCCGGCTC------CGGC---------G---------CTCGGTTCTCCTGGCAGCGGCAGGGGAGGA
AGCTGCAG------------GACGACGACGGCCAGGCCAG---AGCAGGGCAAGACGGGAAGCAGGGCGGTCTGCCGGCG
GAGGCGGAGCAGCAGCCGGACAAGGGGAAGTCGCAGTCGCCGCCGACGTTGCAGCCGCGGTTCGCGCCGGAGTTCGATGG
GATCGACTGCTTCGGGACCATCGTGTGCCACTGAGC----AC---TG------A---ATGA------CGGGCTGCTCGTG
GTCTGGCCGCGCGCGT--GTGAGAC---------TTATTTCTTCGTTCGATCACACCGTACTATGGGCGTGTTCATTT--
GCTGTTAAC--TTG---GGCTTCTAGCTGAAGCCGCGTGTTGTACAGAATACAGTGCTG-----GAAAGAAACCAATTTC
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>chr1D_755
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-------------------TTTGTCAAATTTCACGGGCAGAGAAAGCAGCACAGGAGG----GAAAAAAAACACGCGCGA
AACCCCGAAACC---------ACGAGACGGTTG----CAACCTCCACGACGCCACCGCGTGCGTCACGA-----------
G---------------GCTCTCCCTCGCGGCCGCGTCCACGAATATT----CTGGACTCCTCCAGCGT----TACAAACC
GCCATGACCAGAACTT------CC-TCCATGACC---ATGCT-CGCCGTATATAACCAGGGTCGCGTCCCC-TCCCTCTC
TTCACCAACCCG----AGTAAG--CAAG----CAAGCAAAGCCACA----------------------------------
--GAGCGTGCGTGCAAGAAAGCATCGGCCACCGGAGCTGCTGCAG-------------------GAA--------TCATC
CCCGTCTACAACCAATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACGTCGCCCCCGG
C------------GCCGGCGC------CAGC------TGGG---------CTCGGTTCTCTT------GGCAGGGGAGGA
AGCTGCGG------------GAC---GACGAACAGGCCAG---AGCAGGGCAAGAGGGGAAGCAGGGCGGTCCGCCGGCG
GAGGCGGAGCAGCAGCCGGACAAGGGGAGATCGCAGTCGCCGCCGACGTTGCGGCCGCGGTTCGCGCCGGAGTTCGACGG
GATCGACTGCTTCGAGACCATCGTGTGCCGCTGATGAGTGAG---TG------A---ATCA------CGAGCTGCTCGTG
GTCTGGCCGCGCGTGT--GAGACTCACA---TGATTCTTTCCTCGTTCGAT--CACCGTACGGTCGGCGTGTTCATTT--
GTGGTTAAC--TCGTGCAGCTTCTGACTGAAGCCGCGTGTTGTACAGAATACAGAGCTACTGTATAAAGAAACCCATTTC
GCCGTGATTATTTGGA--TAAGCTTTGGTTTTTAAGGCTTGATGAGACGTCATGACGGAGCAGAGATGTTCGGTCGA---
-ACTAATCCAGAATTGGAACCGCCCAATCCGAAAAGCGGTGGACACGTGTGACCTACAGCTCGC-TAGATGTCCAAACTA
C-----------AACCACACGCTGCTACACCACCCAAGAACCAGCACACACACGTCACGTCGAGGAGGGATTGGTGTGGT
ACACCTGCAGCTCGGCCCCGCATGGCAGTGAGTTGGACGCGATAAATGGCCTCACGAGACTCGCAGCTAGCCCCGAATAA
GAAGGAATCGAAGACC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr3A_778
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------AAGACAGCACAGGAGGGAAAGAATATAGACACGGGCGA
AA---------C---------GCGAGACGGTTG----GAACCTCCGCCACGCCACCGCGTGCGTCACGAGCTGGCTCGCC
G---------------GTTCTCCCTCGCGGCCGCGTCCACGAATATT----CTGGGCTCCTCCAGCGCGCGCAAGAAACC
GCCATGCCCAAAACTT------CC-TCCATGACC---ATGCCCCGCCGTATATAAGCCGGGTCGCGTCCCC-TCTCTCCC
TTCACCAAGCCG----AGCAAG--CAAG----CAAGCAAAGCCAATTGATTGA-TTGAAGCAAAGTCACAGAACGAGCGT
----GCGTGCGTGCAAGAAAGCATCGGCCACCGGAGCTGCTGCAG-------------------GAAGCCAGGAATCACC
CCCGTCT----CCAGTCGAGCATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCCGACGTCGCCCCCGG
C------------GCCGGCGC------CGGC---------G---------CTCGGTTCTCCTGGCAGCGGCAGGGGAGGA
AGCTGCGG------------GAC---GACGGCCAGGCTAG---AGCAGGGCGAGAGGGGAAGCGGGGCGGTCTGCCGGCG
GAGGCGGAGCAGCAGCCGGAGGAGGGGAAGTCGCGGTCGCCGCCGACGTTGCCGCCGCGGTTCGCGCCGGAGTTCGACGG
GATCGACTGCTTCGGGACCATCGTGTGCCACTGAGC----AG---TGAATCAGA---ATCA------CGGGCTGCTCGTG
GTCTGGCCGCGCGCCTGGGTGG--GACTA----ATTATTTCTTCGTTCGAT--CACCGTGCGATCGGCGTGTTCATTT--
GCTGTCAAC--TTG---AGCTTCCAACTGATGCCGCGTGTTGTACAGAATACAGAG-----GTATAAAGAAACCAATTTC
ACCGTGATTATTTGGAGATGAGCTTTGGTTTTTAAGGCTCGA-----TGTCATGACGGAGCAGAGATGTTCAGT------
--------------------------------------------------------------------------------
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>chr7D_780
AGCAGCA-------------------------------------------------------------------------
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--------------------------------------------------GCAGGAGGAAAAGAAGATAAAAACGCGCGA
AA---------C--------AGCGAGACGGTTG----CAACGTCCACCACGCCACCGCGTGCGTCACGA-----------
GCTCCCTCGCTCCTTCCTTCCCCCTCGCAGCCGCGTCCACCAATATTAATTCTGGTCTCCTCCAGCGC----AGG-----
-------------CTT------CC-TCCATGCC------ACCAAGCCGTATATAAGCCGGGGCGCGTGGCC-TTTCTCCC
TTCACCAACCCC----ATCAAG--AAACAACCCAAGCAAAGCCACCA-ATTGA-TTGAAGCAAAGTCACA----GAGCC-
-------TGCGTGCAAGAAAGCCTCGGCCACCGGAGCTGCTGCAG-------------------G---------------
----TCT----CCTATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCCTCGCCGGCCGACATCGCCCCCGG
C------------GCCGGCAAAGGCGGCAGC------TGGG---------CCCGGCTCTCCT------GGCGGGGGAGGA
AGCTGCAG------------GAG---GGCGACCGGGCAGG---AGCAGAGCACCAAGGGAAGCAGGGAGGCCTGCCGCGG
GAGGCAGAGCAACAGCCGGGCAAAGGGAAATCGCAGTCGCCGTCAACGTTGCCGCCGCGGTTTGCGCCGGAGTTTGATGG
GATCGACTGCTTCGAGACCATCGTGTGCCATTGATC----GCTGATG------A---ATCG------CGATCTGCTCGTG
GTCCAGCCGGGCGTGT--GGCT---ACGTACTGATTCTTTCTCCGTTTGTC--GGCCGTACGATCGGCGTGTTCATACGT
TTC-TTAAC--TTG---TGCTTCTAACTGAAGCCGGATGCTGTACAGAATACAGAG------------------------
--------------------------------------------------------------------------------
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>chr7D_783
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-----------------------------------------------AGCACAGGACAAAAAGAAGATAAACGCGCGCCA
AG---------CTCCGAAACAGCGAGATGGTTG----CAGCCCAAACCGCCATGCCCAA---------A-----------
G---------------CTTCTCCCTCGCGGCCGCGTCCACCAATATT----CTCGACTGCTCCAGCGC----AACAAACT
GCCCAGGCCGGGGGGTCTTGCTTCC------TCG---AGGCTTCGCCGTATATAAGCCGGGTCGCGTCCCC-TCTCTCCC
TTCACCAACCCG----AGCAAGGCCAAG----CAAGCAAAACCAATTGATTGA-TTGAAGAAAAGTCCGGGC--------
----GCGTGCGTGCAGGAAAGCATCGGCCACTTGAGCTGCTGCAGGA---------------------------------
------------CGATCGACTATGGACAAGGTGCTGTCCTTCTCCATCCTGAGCGCGTCGCCGGCAGACATCGCCCCCGG
C------------GCCAGCAA------CGGC---------GGCAGCTGGGCTCGGCTCTCCT------GGCGGGGAAGGA
AGCTGCAG------------GAG---GACGACCGGGCTGGAGCAGCAGGGAAACAGGGGAAGTAGGGCGTTCTGCCGGCG
GATGCAGAGCAGCAGCCATGCAAAGGGAAATCGCAGTCACCGCT---------GCCGCGGTTCGCGCCGGAGTTTGATGG
GATCGACTGCTTCGAGACCATAGTGTGGCATTGATC----GG---TG------A---ATCA------CGAGCTGCTCCTG
GTCCAGCCGGGCATGT--GACT---ACTA----ACTCTTTCTT-------------CGTTTGATCGGCGTGTTCATTC--
ATTGTTGAC--GTG---TGCTTCTAAATGAAGTCGCATGCTGTACAGAATACCGAGCTA---------------------
--------------------------------------------------------------------------------
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>chr3B_804
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--------------------------------------------------------------------AAACACGCG---
--------------CGAAACCACAGAACGGTTG----CAACCTCCACCACGCCACCGCGTTT-TCACGAGCTCGCTCGCT
G---------------GTTCTCCCTCACGGCCGCGTCCACGAATATT----CTGGACTCCTCCAGCGCGCGCTAGAAACC
GCCATGCCCAAAACTT------CC-TCCATGACC---ATGCCCCGCCGTATATAAGCCGGGTCGCGTCGCC-GCTCTCCC
TTCACCAAGT-----------------------AAGCAAAGCCAGTTGATTAA-TTGAAGCAAAGTCACA----GAGCGT
----GCGTGCGTGCAAGAAAGCGTCGGCCGCCGGAGCTGCTGCAGGAAGCCAGGAATCATCCCCG---------------
----TCT----CCAATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCTGACGTCGCCCCCGG
C------------GCCGGCTC------CGGCAACAGCTGGG---------CTCGGCTCTCCTGGCAGCGGCAGGGGAGGA
GGCTGCAGGAGCAGCAGGACGAC---GACGACCAGGCTAG---AGCAGGGCAAGACGGAAAGCAGCGCGGTCTGCCGGCT
GAGGCGGAGCAGCAGCCGGACAAGGGGAAATCGCAGTCACCGCCGACGTTGAGGGCGCGGTTCGCGCCGGAGTTCGATGG
GATCGACTGCTTCGGGACCATCGTGTGCCACTGATC----AG---TG------A---ATCA------CGAGCTGCTCGTG
GTC-----------GT--GTGTGAGACTA----ATTCTTTCTT-------------CGTGCGATCGGCGCGTTCATTT--
GCTGTTAAC--TTG---TGCTTCCAACTGAAGCCGCGTGTTGTACAGAATGCAGAGCTA-----GAAAGAAACCAATTTC
GCCATGATTATTTGGAGATTAGCTTTGGTTTTTAATGCTTGA-----CGTCGTGACGGAGCAGAGATTTTCAGT------
--------------------------------------------------------------------------------
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>chr4A_878
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---------------------CCCTCGCTGCCGCGTCCATCAATATT----CTGGTCTCCTCCAGCGC----AGGAAACC
GCCATGCCTAAAGCTT------CC-TCCATGCC------ACTAAGCCGTATATAAACCGGGTGGCGTGGCC-TTTCTCCC
TTCACCAACCCC----AGCAAG--AAACGACCCAAGCAAAGCCACCA-ATTGA-TTGAAGCAAAGTCACA----GAGCC-
-------TGCGTGCAAGAAAGCCTCGGCCACCGGAGCTGCTGCAGGAATT--------ATCCCCG---------------
----TCT----CCTATCGAGTATGGACAAGGTGCTGGCCTTCTCCATCCTGAGCGCGTCGCCGGCAGACATCGCCCCCGG
C------------GCCGGCGG------AAGC------TGGG---------CTCGGCTGTCTT------GGTGGGGGAGGA
AGCTGCAG------------GAG---GACGACCGGACTGGATCAG---AGCACCAAGGGAAGCAGGGCGGTCTGCCGCGG
GAGGCAGAGCAGCGGCCGGACAAAGGGAAATCGCAGTCACCGTCGACGTTGCCGCCACGGTTTGCGCCGGAGTTTGATGG
GATCGACTGCTTCGAGACCATCGTGTGCCATTGATC----GC---TG------ATGAATCG------TGATCTGCTCGTG
GTCCAGCCGGGCGTGT--GACT---ACTA----ATTCTTTCTCCGTTTGAC--GGCCGTACGATCGGCGTGTTCATTC--
GTTGTTAACTTGTG---TGCTTCTAACTGAAGCCGGATGTTGTACAGAATACAGAGTTA---------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
----SS-S---S--------------------------------------------------------------------
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----------------------------------------------------------------SS--------------
----------------SS-S-SS---SSSSSSSSSSSSSSS---S-----S--SS-----------S-S----S---S--
--S-S-----------------S---------------------------------------------------------
----------S--S------------------------------------------------------------------
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------------------------------------------------S-------------------------------
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--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SS----------------S-----------
--------------S-S---------------S------S-S--------S----SS---S---S-SS------SSS---
-----S--SSS---------------------------------------------------------------------
--------------------------S--------------S--------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S----------S-S-----------------------------------------S------------
-----------------------------------------------------S------------S-------------
----------SS--------------------------------------------------------------------
-----------------S--------S------S-S---------------------------------------S----
-SSSSSSSSSSSS-------------------------------------------------------------------
-------------------------------------------------------------------------S---S--
--------------------------------------------------------------------------------
------------------------------------------------------SSS-SSSSSSSSS--S----------
---------------------S----------------------------------------------------------
------S-------------------------------------------------------------------------
-------------------------------S--------------------------------------------SSSS
S------------S-------------S-----------S---------S--S---------------------------
---------S-S----S--------------------------------------------------------SS-----
-------------------S-----------------S-------------------------------S----SS----
S----S--S--S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_78
----------------------------------------------------------GCCCGACTCAACCTTCTCTC--
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>reverse_7345
--------------------------------------------------------------------------------
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----------------------------------------------------------------ACCTTGTCATCGACGG
GAAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
