>input_sequence_75562
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--------------------------------------------------------------------ATGCAGGGATCC
GTTTCGAGAATGGGGCCATGCGGCGGCGGCGGCGGCCACGACAGGGACATGGACATGCGCGGCGTGAACCGTGTGGTCAA
GCTGGTCGTCCGCCACGGCGACACCGTCGACGCCATCTCCGTCCTGTACGAGCGGAACGGCCGGGAGGAGTGGACCGACC
TGTGGGGAGGACAAGGGGGGACGCTCTCCGAGGTACGTACGTTAGACACACATTGCTCCCTGACGA---AGACGACTCCA
TTTTTCATCCATCATCGGTGATGGAGCTCCTTATA-------CTCCATTTCGTTGTGGATGGCTCAGATCTGCCTGCGGC
CGGACGAGCACTTCACCGGCGTCGTGGGCCACTACGGCGAGTTTGATGGCAGCTTCGCCGTGAGGTCGCTCACTTTCGTC
AGCAACGCCCGCAGCTTCGGGCCGTACGGGCAGGAGGATGGCGTGCCGTTCGCGCTTCCTGCGGCCGGCGGCAAGATCCT
CGGCTTCCACGCGCGCTCCGGCCGCCGCCTGGACGCGCTCGGCACCTACGTCAAGATGGCAGATCTGTCCACGCAGGCCC
CACGGAACTGA---------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G254500
CCGACCCGGCCTGGCCCGACGCTGCCCCCGGGCCAGGCTCGGGCCTAGATCTTGAGCCCGAAGGCCGGGCCGGGCCGGGC
CTGGGCCCGTCATTTTTGCATTTTTCTAACGGCCGGGCCGGGCCGGCCTAGAGCCCGACGAACTTTTACGTGTTCGGGCC
GGGCTCGGGCCAGAAAACAGGCCCGATGGCCGGGCCGGGCCAGGCTCGAGCCTGGGTTTTTTTCGTCGGGCTTGGCTAGG
CCCGGCCCGAGGTATGGCCAGGTATACTCCTGCCAGACTAATGATCATGGATTGCTCCAGGCCAGGCTTATTGAGGACAC
CAAGCAAGCAACCTCCAGGCAGATCCCAGGGAAGGTCCAGGCCAGGCAATTTTTTGTGAAGCCTCCAACCAAACTAGCCC
ATCATCTTTACACTTATGAAGTTATTATAGGCACGTCATAGTTGAGGAGAACGTCTCCTCCAACCAAACGCGCATCGCCA
TAAATCCTGAAATACCTGATGGGTGGCGGGTACAATTGTTCTTCTGAGCATTCAACCATATTTTGGTTCGCTTTGAGATT
TAATAGATGATGGATGGTGTCGTGGATGTACTCTCTCTGGATGAAAACC--TGATCTAGCCTGGTATGCACTCTCGTTCC
CTGTAGGCTGGCTACGGCCCGGATCTCACGCAAGTGTGCTGAACATTGGAGGCCTTTTGTA-----AAAACCAAACCAGG
CTAGCGAATAGTGGACGTACGCCAACTGCCAAAGCCAAACAAGCCTGAACTGAACTCAAGTTGAAATCCAAGACAAATCT
TATGCACAGCCTGTTCACAAGGCGGCATTACCTGTTGCCAGAACACACTATGAGTAC-ATTATGTAACCCAAT-GTAGTG
CCAAGCACGTACGAACTGT-ATTAGTTGACTTTGTGCTGTGCCACAGACCCATAGTTGCTCGTCCTCGTTCCCATACGTG
CCAAAGCCAAACCA-TACCGTCGTCGGGAAAGA-----------------CCAGGGACGAAAAACAAAATGCAGGGATCC
GTTTCGAGAATGGGGCCATGCGGCGGCGGCGGCGGCCACGACAGGGACATGGACATGCGCGGCGTGAACCGTGTGGTCAA
GCTGGTCGTCCGCCACGGCGACACCGTCGACGCCATCTCCGTCCTGTACGAGCGGAACGGCCGGGAGGAGTGGACCGACC
TGTGGGGAGGACAAGGGGGGACGCTCTCCGAGGTACGTACGTTAGACACACATTGCTCCCTGACGA---AGACGACTCCA
TTTTTCATCCATCATCGGTGATGGAGCTCCTTATA-------CTCCATTTCGTTGTGGATGGCTCAGATCTGCCTGCGGC
CGGACGAGCACTTCACCGGCGTCGTGGGCCACTACGGCGAGTTTGATGGCAGCTTCGCCGTGAGGTCGCTCACTTTCGTC
AGCAACGCCCGCAGCTTCGGGCCGTACGGGCAGGAGGATGGCGTGCCGTTCGCGCTTCCTGCGGCCGGCGGCAAGATCCT
CGGCTTCCACGCGCGCTCCGGCCGCCGCCTGGACGCGCTCGGCACCTACGTCAAGATGGCAGATCTGTCCACGCAGGCCC
CACGGAACTGATCATGACCTTGCCCATAG------GAGTTCCTTATTGTACGTGCGGTAGTA-----TATCTCACTAGTT
ACGGCTACTCCATGC-----------------------------------------------------------------
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---------------------------------GATTTATTATTTCATAATA----------------------------
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-----------------------------------------------------------CTTGTTTGTGTTCTTCTTACC
ACCCTAGAATTTCCTTGCTGTACGTGC-----------------------------------------------------
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----------GTAGTACATCTCCTCACTAGTTACGGCTTGCTCCTCCATGCCATTTATCATGCCCGACCTGGTTGTGTTC
TTAATAAAATGTACTACATACTAGTATATAATTAAGGGTTTTGATTAGTTTTGTCATTCGATTATGTGATATTACTCCAT
TTGTCACTAGAATTTTCAACTGCCAAAAAATGCTACCCCTTTGTTAAATGTGTGCTAAAAAATGGCACTAGACACCTTTA
TTGTTCGGTTAAAGGCCATTGACCGGGATGAAGTAACCAAAGTACACCT-GACCCCACTTGTCAGCGTCTCCTCAACAAC
TCATCTCATCTTGTGCCTTGATCTGATGGCTATAAGGCCAAAGCTAAAGCAAGTGGTGGAGAGGCTTCTGGGTATGCAAC
TTAGATTGGCCTCTCTGTTGTATACACTGCTACCTAGCTTTTCATACTGGGCACAGAAGGTAATTGCCAGCTACCTTTGT
GCTATACATCGCCGTATGCACAAGTCTAGTGCTCACTCCTGTTGGAAATATGAGCAATTTACCATATGATTTTATTAACA
GAAATACTAGATAAAGCATGACCAAAATAGCAGAGATAAAGCAAGTCATGCAATCTAACAGAGAGAAGGTAAATAATATC
TGCAAATATGAACTAGGACCGAACATATCTAGAGCAGACATTAGTGCAAGTTGCATATATGAAGTAGAACTTAACATATG
TAGAGCAAACGCTACAACAAGGAACTGTGGCAGGACCTCTAACAGAAAGAGCAAGAACACGTACGGGACAGCAGCAGCAG
TGGACTTGGGGTCGGTGACCTCGCCAGCCATGTCGTCCAGGAGGTTGTCGACGTCGGGGAAGAAGTCGTCG
>chr7A_552
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-----------------------------------------------------------------------TTTGAGGTT
TAATAGAGGATG-ATGGCTTTGTGGATGTACTCTCTCCGGATGAAAAGCCATGATCTAGCCTGGTGTGCAATCCCGTTC-
-----GGCTGGCTATGGCCCAGATCTCACTCAATTCTGCTGAACATTGCAGGCCTTTTTTTTTGTGAAAACCAAACCAGG
CTAGCGAATGACGGACGTACGCCAACT------GCCAAACAAGCCCGAACTGAACTCAAGTGGAAATCCAAGACAAATCT
TATGCACAGCCTGTTCACAAGAAGGCATTACCTGTTGCCAGAACACACTATGAGTAC-ATTATGTAACCCAAT-GTAGTG
CCAAGCACGTACGAACTGCAATTAGTTGACTTTGTGTTGTGCCACACACCCATAGTTGCTCGTCCTCATTCCCATACGTG
CCAGAGCCAAAGCTAGACCACCGTCGGCAAAGACGCTCCCCGCGTTGTTTCCAGAGACGAAAAACCAAATGCAGGGGTCC
GTTCTGAGGATGGGGCCATGCGGCGGCGGCGGCGGCCACGACAGGGACATGGACATGCGCGGCGTCAACCGTGTGGTCAA
GCTGGTCATCCGCCACGGCGACACCGTCGACGCCATCTCCGTCCTGTACGAGCGGAACGGCCGGGAGGAGTGGACCGACC
TGTGGGGAGGACAAGGGGGAACGCTCTCTGAGGTACA-----CACACATGCATTGCTTCCTGATGAAGACGACTCCGTTT
TGCAT-ATCGATCATCGGTGATGCAGCTCCTT--A-------CTCCATTTCGTTGTGGATGGCTCAGATCTGCCTGCGGC
CAGACGAGCACTTCACCGGCGTCGTGGGCCACTACGGCGAGTTCGACGGCAGCTTCGTCGTGAGGTCGCTCACTTTCGTC
AGCAACGCCCGCAGCTTCGGGCCGTACGGGCAGGAGGACGGCGTGCCGTTCGCGCTTCCCGCGGCCGGCGGCAAGATCCT
CGGCTTCCACGCGCGCTCCGGCCGCCGCCTGGACGCGCTCGGCACCTACGTCAAGATGGCAGATCAGTCGCGAAAGACCC
CACGGAACTGATCATCACCTTGCCCATAGAAGTTCAAGTTCCTTATTGTACGTGC-GTAGTGCATCTTATCTCAATAGTT
ACGGCTACTCCATGAGTGCGGCGAATCTGCACCCGGGCTCAGCTGCACCCGCGCTCACGGAAAAAATCAAAAAAAATACT
AGAAAAATTCAAAAAAATCCAAAAAAAAATTGTATGGTAGATAATTTGATGCATAAGGTTCGCTCCAAATTCAACTCATT
TGAACATTTGAGTAGCTTTGGGCAAAAAAGACAAAATCGAGGTATGTAAAACAGTTTACTGTTCAGGAACTGTTTTGACT
CGATTTGTCTTTTTTGCCCAGAATTGCTCAGATGTCCAAATGAGATGAAATTTGGAGCGGACCTCATGCATCAAATGATC
TACCACATAATTTTTTTGGAATCTTTTGAATTTTTCTAGTATTTTTTTTTAATTTTTTTCTGAGCGGGTGCAGCTGAGCC
CGTGCTCAGATGCAGATTTTCGCTATTCCATGAGATTTATTATTTCAAAATAATAAGTACTCCCTCCGTTTCTAAATATA
AGTCTTTGTAGAGATTTCGCTATGAAGCACATACGGATATATGCTGATCCATTTTAGAATGCAGATTCATTCATTTTGCT
CTATACATAGTCCGCAGTGGAATCTCTACAAAAACTTATATTTAGAAACGGAGGAAGTACTTGTTTGTGTTCTTCTCACT
ATCCTAGAATTTTCTTGCTGCACGTGCCTAGTACGTCTTTTACGAAAAAAGGGTTTCCACCGCTTTATATATAAGCACCA
ACACTTAGATCCAAGTAACCGATACAAAGGCACGTCACACAACCCAAGGCAAGATACAAGAATGCCAGACACCAACACAC
AACCTCAACAACTACCAAGTATCAAGAAATTGAGCAAAAAAAACCGCTTGTATCCGACGAAGACCACCATCAAGATGAGA
GATCGTCCGGGAAAAAGTGCAACGGACAACGCCGGACCGAGGGCTCCAAGATGATGCCTCCAAGAAGGGCACGACCACGG
ACCATCGCCATCGTCCGATCCAAAGATCAGGTTTTCACCCGGAACAAGACGAGAGGAGTAAGAGCACCACAACGGAGCCT
GCAAGGAGGAACATGACGTCCGCGGACATCGCCACCGTCGGCCCGTGTACGGACAAGTAAGTGATGAACCCCGGTGCTCC
ACCCTTCCGCTGCATCCCCGCTCCGCCAACCACCTGCAACCATGCCACCCAAGCGGCCATGGTTGCTCGCCCGCATCCGA
GTCGCGCAATCCGGCTACGACCAACGCGACTCCCACCGCCAGGGCCGCCGCCTCGCCGCCGGACCACCCCGGAAGCCCCA
AAGGTCACGTCTTGGACAAGATCCATGAGCCCAACCACCTCAGAACCGCCGGCGACCACTGCCTCAAGAGGAACCATGCC
CAGTCGGCCGGGGAAAGGGGGAGGAGGAGGAACGGCCTATGGCCACGACCGGCACCTCTGCGCCGGTGATGGGGTACGCA
ACGGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCTGGCTGGACGGGGCCGCCCACCTCCACCGCTGCCGTG
TAGCCCCTCCACTAGAGATCCACGGCGAGAGGGCCCACCCACGACCCGCAGCGCCAGACGTGGCGCCGAGGCACTCCTGC
GAGGCAGCCGCCACCAGCCGACCTGCACCACCACCATGACGCCCGTCGCCCGACGCCACGCCGCCGTCGTTGGCCCACTC
CGGAGCGCCGTCGCACCGCTACGCCCGGCATCGAGCGCAACATCCCCACCGTCGAGATCCGGCCCGCGCCGCACCTCCCG
CGCAAGGAGACGAAATGGCCCCGCCGCTGCCGGCGACGATCGGGCTTCGCCAGCTCGTGCCCCTTGGCGGCGGCGAGGGA
GGAGAGAGAGAAGCAGGGGGGTGGTGGTGGCGCCAGGGTTGCCTCTCGGACGCCTGCGGGAGCGTCGCGGGAGGGGAGGG
GGAAAATAATGTAGTACATCTTCTCACTAGTTACGGCTTGCTCCTCCATGCCATTTATCATGCCCGACCTGGTTGTGTTC
TTGCTAAAATGGGTG------TACTATATAATTAAGGGTTTCGATCAGTTTTTCATTAG--TTATGTGACATTCCTCCAT
TTGTCATTAGAATTTTCAACTACCCAAAAATGTTATCCCTTTGTTAAGTGTGTGCTAAAAAATGCCACTAGACATCATTA
TTGCCCGGTCAAAAGTCATTGACCGGGGTGAAGTAACCAAAGTATTCCTAGACCCCACTTGTCAGTGTCCCCTCAACAAC
TCACCCCAACTTGTGCCCTGATGTGATGGCTATAAGTCCAAAGCTAAAGCAAACTGTGGATAGGCTTCTCAGTATGCAAC
TTAGGTTGGCCTCTCTGT--------------------------------------------------------------
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>chr7B_792
CTA-----------------------------------------------------------------------------
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-ATGCACAGCCTGTTCACAAGAAGGCATTACCTGTTGCCAGAACACACCAGTATTAGTATTACATAACCCAATGGTAGTG
CGAAGCACGTACGGACTGC-ATTAGTTGACTTTGTGTTGTGCCACAGACCAATAGTTGCTCGTCCTCATTCCCATTCGTG
CCAAAGCCAAAGCTGTACCACCGCCGGCAAAGACGCTCCCCGTGTTGTTTCCGGTGACGAAAAACCAAATGCAGGGGTCC
GTTTTGAGAATGGGGCCATGCGGCGGCGGCGGCGGCCACGACAGGGACATGGACATGCGCGGCGTCAACCGTGTTGTCAA
GCTGGTCGTCCGCCACGGCGACACCGTCGACGCCATCTCCGTCCTGTACGAGCGGAACGGCCGGGAGGAGTGGACCGACC
TGTGGGGAGGACAAGGGGGGACGCTCTCCGAGGTACGTACGTCACACACGCATTGCTCCCTGATGATGAAGACGACTCGA
TTTTTCATCGATCATCGGTGATGGGGCTCCTT--AGTACTTACTCCATTCCGTTTGGGATGGCTCAGATCTGCCTGCGGC
CGGACGAGCACTTCACCGGCGTCGTGGGCCACTACGGCGAGTTTGATGGCAGCTTCGCCGTGAGGTCGCTCACTTTCGTC
AGCAACGCCCGAAGCTTCGGGCCGTACGGGCAGGAGGATGGCGTGCCGTTCGCGCTTCCTGCGGCCGGCGGCAAGATCCT
CGGCTTCCACGCGCGCTCTGCCCGCCGCCTGGACGCGCTCGGCACCTACGTCAAGATGGCTGATCAGTCGACACATACCC
CACAGAAGTGATCATGACCTTGCTCATAG------AAGTTCCTTATTGTACGCGC-GTAGTG-----TATCTCACTAGTT
ACGGCTACTCCGTGC-----------------------------------------------------------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--
-------S----S----SS-S----------------S---------S-----------------S----S--S-----S
SSSSS---------S-----S--------S---S-S------------S---------S-S-------------------
---------SSS---------------SSSSSS------------S---------------S------------------
---------------------SS---------------------------------------------------------
------------------S-----------------S------------------------------S------------
-----------S-S-----SS------S--------------------------S----------S----------S---
----S------------------------------------------------------------S--------------
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------------------------------------------S-S----S-------------S--------------S-
---------S----------------------SS----------------------------------------------
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-----------------------------------------------------------------S---S--S---S---
-----------------------------------S-------------------S-----S------------------
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----------------------------------------------------------------------------S--S
-S----------S-------S-----------------------------------------------------------
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---------------------S----------------------------------------------------------
--SS-------SSSSSSSSSS--S-----------------S---S------SSSS-SSSS--------S---S------
------S--------------S--S-------S--S-----------S----------------S---------S-S---
---SS----S---S-S-----------S----------------SS-------------------S---S----------
---S-S--S--------S----S-------------S---------------SSS-----S--------SS---------
----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_151
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---------------------------------------------------AGCCCGACGAACTTTTACGT---------
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>reverse_2333
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------------CCTTGCTGTACGTGCGTAGT------------------------------------------------
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