>input_sequence_75499
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----------------------------------------------------------------------------ACAC
CGCACGCATAGCCCTCATATATCGATATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGGGAAGACGTCG
TGGCCAGAGTTGGTGGGCATGCCGGCGACACCAGCAGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGT
GCTCCAGATTGGGATAAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
TTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATACATAGCAGAGTTTTTCTGAGGAGGCTACATGGCATGGTGATA
T--TAT-CCCCTTAGAAACGGGGCGGTTGGCGATATA----ACCTGCGGGCGATC-------------------------
------------ATATATGTAGCTGTTTGTGTCGTCTTTTGTGCTTATGGCTTGGTG----AATGGTTTCAT--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATATTAAG
CG-TATGGTCCAGTATACAATTTATTTAGGAAACAGCATGTTCTCAATACAATTGTTGATTGATAATGGTGTTTTATTGA
---------------------TATCTTTTCCTTTACCCCTTGTTAAAGGAAAATCATCATACGAAAGCATTTCCTCAATA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1B_1_TraesCS1B01G026800
CATAGAGAAGACACGAAAAATAATTATGTATCTTTTTCCCTGTACCGCGTACGTGACTCACTCATAAAGAAAGGCTCGTG
-TTTTTTTTTTGCAACCAAGAAAAGCTGGTACTTGGTTTCCACGTGTAGAAAACAATCTTGCTAAATGACTTCCTTAAGT
TTGAT--TACGTGTTCGCCTACAATGCTTCAGTCTCCCATTAAGCAAGTGGATAAAATATACGTAGATCAGAGCACATAA
GT---------------------ATGATTCTTGACACGTTGAAGGGATCTAATGCGCACGTACAGGACTACAGGGATGCA
ATGCAACATAAATGATGGAATTTAAAATACACTTACATGCATGCAACCGTCAGTTTCTGCATGCTTGCATGGATCTTAGT
GTAGGGCTTTCAACGTCCACATCGGGTGGCTATTATAGACTGATCTAGTATATCGAACGGCTATATTTATTTTGATGATG
TGGCTCAAGGAGAGAGTAGAGAATTCCTATTAGTGGAGGCTAGCTATTTAGATATAGTAGATTACCTAATAAAGAAATGG
GAACAACTCTTTTTTTTTATAATGGCCAAATTAATATGTGGTGGAATGCGTTTGGGCAGTCGAGAGTACAGTTTAAACCC
GATGCAGCCGGGTTTCCATGCTCTTCATATATAACTCATAAGGAAAGTTTCTCTATCATATCATGAGAAAGAAACGAGAA
GG--AAATAATCTAACTTTGCTCACTAGCAGAATGTGCCAACTTTCTCTGAAAGACAAAAACAACATGCCAATTAACCAA
ACAT-GTGCATTATACATATA-TTTTTTATTCACAAAAGTATTTATTTTTTAGCATAAGGTCCTCCCGAATAATTTAATG
ATTCATGCCTCGAGTAATCAGCCTCGTTGTTTTGTGAGCAAACGATCTGTCCAGAAGTGA------AACATTGGAGCATC
ACCCGGTCATGCCGGCCTTTT---TTCGGTATGCATGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCCTATAAATCCACTGCAATAT-GAGAGACTTG--CAACCACAC
CGCACGCATAGCCCTCATATATCGATATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGGGAAGACGTCG
TGGCCAGAGTTGGTGGGCATGCCGGCGACACCAGCAGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGT
GCTCCAGATTGGGATAAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
TTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATACATAGCAGAGTTTTTCTGAGGAGGCTACATGGCATGGTGATA
T--TAT-CCCCTTAGAAACGGGGCGGTTGGCGATATA----ACCTGCGGGCGATC-------------------------
------------ATATATGTAGCTGTTTGTGTCGTCTTTTGTGCTTATGGCTTGGTG----AATGGTTTCAT--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATATTAAG
CG-TATGGTCCAGTATACAATTTATTTAGGAAACAGCATGTTCTCAATACAATTGTTGATTGATAATGGTGTTTTATTGA
---------------------TATCTTTTCCTTTACCCCTTGTTAAAGGAAAATCATCATACGAAAGCATTTCCTCAATA
AAAATAACAATGTTTTGGATCTATGAAAATCCTATGGAACACACGTACAG--TATAGAGCACCTTCCTGGTGCTATGGAG
CGCTGGCCATCTGATTCGGAGTGTTGCTGCGTGTACTGGTTGTAATATATTTCAGTGAGAATTGGTTGAATAAAATGTTG
ATATT-GTCTTAATAAAACGAGAACTTGAAGTAAAAACAGATGTGATTTATTTATATGTTTATTAAGTTAGTCATTTTTT
CAAGCACGTTAAGACAAGCATTTTCCTGCATATTTGCATGTTGAGGTGTCATGTGTGAAGTTGAGAAAAACAAATTAGTA
AGGATCTACCATTTAGTCATATAGAATGTGGTCGAAGTGCCAATTGCAACAAAATTTATGCCCAATTGTGGTCAACCCGA
CCTACATCCCATAACAACTCAGCTTCCTGTTCATTTCACTTAAATAAAAGGAATCG---------------GGAGGGAGA
GTGGCGATGGGTGCATGGGACAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGGAGCTGTCAACCCAACCAGGGCCGCGAGATATTGGTG
GCAGCGGGCCAAGGATG-CAAAGACCTTGCTCAAACGTGCAATCCCCGCTGCCATGTCACC
>chr6A_1
CATAGAGAAGACACGAAAAATAATTATTTATGTTTTTCCAT-------GTACGTGACTCACTCATAAAGAAAGGCTCGTG
GTTTTTTTTTTGCAACCAAGAAAAGCTGGTACTTGGTTTCCACGTGTAGAAAACAATCTTGCTAAATGAGTTCCTTAGAG
TCTGAAGTACGTGTTCGCCTACAATGCTTCAGGCTCCCATTAAGCAAGTGGATAAAATATA----GATCAGAGCACACAT
AAGGAAAGAAGATCAGGCACACCATGATTCTTGACACGTTGATGGGATGCAACTGTGAGTTTCTGCATGCTTGCACATAC
ATAT--------TGATGGGATTTAAAACACACTTGCATGCATGCAACCGCGAGTTTCTGCATGCTTGCATGGATCTTAGC
GTAGGGCTTTCGACGTCCACATCGGGTGGCTATTATAGATTGATCTAGTATATCCAACGGCTATATTTATTTTGATGATG
TGGCTCAAGAAGAGAGTAGAGAACTCCTGGTAGTAGGGGCTAGCTATTTAGATATAGTAGAT------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr1B_511
TAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TATATTACCTAATAAAGAAATGG
GAACAACTCTTCCTTTTTATAATGGACGAATTAATATGTGGTGGAATGCGTTTGGGCTGTCGAGGGTACAGTTTAAACTG
GATGCAGCCGGGTTTGCATGCTCTTGATATATAACTCATAAGGCAAGTTTCTCTATCATATCATGAGAAAGAAAGGAGAA
GG--AAACAATCTAACTTTGCTCACTAGGTGAATGTGCCAACTTTCGCTCAAAGACAAAAACAAAATGCCAATTAACTGA
ACCT-GTGCATTATCCATATATTTTTTTATTCACAAAAATATTACTTTTTGGCG-TAAGGTCCT-CCGAATAATTTAATG
ATTCATGCCTAGAGTAGTCAGCCTCGTTGTTTTGTGAGAAAACGATCTATCCAAAAGTGA------AACATTGGA-CATC
ACCCGTTCATGCCGGCCTTTT---ATCTTTATGCATGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCCTATAAATCCACTGCAATAT-CAGAGACTTG--CAACCAC-C
CGCGCACAGAGCCCTCACATATCGATATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGGGAAGACATCA
TGGCCGGAGTTGGTAGGCATGCCGGCGACACCAGCTGTGATGACCATCAACAGCCAGAGGCCTGACTCGACGACCGAGGT
GCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
CTGGCCTTGCTGCAGCCGTCCCTGTCGTTGGCTAGATACATAGAAGAGTTTTTCTGAGGAGGTTACATGGAAGGGTGATG
T--TA--CCCCTTAGAAATGGGGCGGTTGGCGATATA----ACCTGTGGGCGGTTATGTATGTATAACATGTTACATGTA
AGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTG----AATGGTTTCACATAATACA
TGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTGAATGGTTTCACATAATACA
TGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTGAATGGTTTCACATAATAAG
AG-TATGGCCCGGTATACAATTCATTTAGGAAATTGCATGTTCTCAATACAATTGTTGATTGATAATTGTGTTTTATCGG
-TCACAAATATATGTGAGACATATCTTTTCCAATACCCCTTGTGAAAGAAAAATCATCATACGAAAGCATTTCCTCAATG
AAAATAACAATGTTTTGGATCTATGAAAATCCTATGGTACGCGCGTACAG--T--AGAGCACCTTCCTGGCGCTATGGAG
CGCTGGCCATCTGATCCAGAGTGTTGCTGCGTGTACATGTTGTAATATATTTCAGCGAGATTTGGTTGGATAAATTGTTG
ATATT-GGCTCAATAAAATGATAACTTGAAGTAAAA-TAAATGTGATTTCTCTATATATTTATTGAGATAGTCCTTTTCT
CATGCACGTTAATC--------TTCCTGCATATTTGCATGTTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1B_511
TAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TATATTACCTAATAAAGAAATGG
GAACAACTCTTCCTTTTTATAATGGACGAATTAATATGTGGTGGAATGCGTTTGGGCTGTCGAGGGTACAGTTTAAACTG
GATGCAGCCGGGTTTGCATGCTCTTGATATATAACTCATAAGGCAAGTTTCTCTATCATATCATGAGAAAGAAAGGAGAA
GG--AAACAATCTAACTTTGCTCACTAGGTGAATGTGCCAACTTTCGCTCAAAGACAAAAACAAAATGCCAATTAACTGA
ACCT-GTGCATTATCCATATATTTTTTTATTCACAAAAATATTACTTTTTGGCG-TAAGGTCCT-CCGAATAATTTAATG
ATTCATGCCTAGAGTAGTCAGCCTCGTTGTTTTGTGAGAAAACGATCTATCCAAAAGTGA------AACATTGGA-CATC
ACCCGTTCATGCCGGCCTTTT---ATCTTTATGCATGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCCTATAAATCCACTGCAATAT-CAGAGACTTG--CAACCAC-C
CGCGCACAGAGCCCTCACATATCGATATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGGGAAGACATCA
TGGCCGGAGTTGGTAGGCATGCCGGCGACACCAGCTGTGATGACCATCAACAGCCAGAGGCCTGACTCGACGACCGAGGT
GCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
CTGGCCTTGCTGCAGCCGTCCTTGTCGTTGGCTAGATACATAGAAGAGTTTTTCTGAGGAGGTTACATGGAAGGGTGATG
T--TA--CCCCTTAGAAATGGGGCGGTTGGCGATATA----ACCTGTGGGCGGTTATGTATGTATAACATGTTACATGTA
AGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTG----AATGGTTTCACATAATACA
TGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTGAATGGTTTCACATAATACA
TGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGCTTATGGTTTGGTGAATGGTTTCACATAATAAG
AG-TATGGCCCGGTATACAATTCATTTAGGAAATTGCATGTTCTCAATACAATTGTTGATTGATAATTGTGTTTTATCGG
-TCACAAATATATGTGAGACATATCTTTTCCAATACCCCTTGTGAAAGAAAAATCATCATACGAAAGCATTTCCTCGATG
AAAATAACAATGTTTTGGATCTATGAAAATCCTATGGTACACGCGTACAG--T--AGAGCACCTTCCTGGCGCTATGGAG
CGCTGGCCATCTGATCCAGAGTGTTGCTGCGTGTACATGTTGTAATATATTTCAGCGAGATTTGGTTGGATAAATTGTTG
ATATT-GGCTCAATAAAATGATAACTTGAAGTAAAA-TAAATGTGATTTCTCTATATATTTATTGAGATAGTCCTTTTCT
CATGCACGTTAATC--------TTCCTGCATATTTGCATGTTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1D_514
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TACATTAGCTAATAAAGAAATGG
GAACAAATCTTTCATTGTTGAATGGACAAATTAATATGTGGCGCAATGCGTTTCGGCTGTAGGGTGTACGGTTTAAACGG
GATGTAGCTTGGTTTGCATGTTCTGCA-ATGTAACTCATGAGGCAAGTTTCCCAATACTAGCATTAGG------------
---AAAACAGTCCAATCTTGCTCAGTAGTTGAATTTGCCAACTTCCCCTCAAAGAAAAAATCCGAATGCCCATCAGCCCC
TTAATGTGCCTTAGCC--ATCTTTTCTTATTCACAAAATGATCTCTCTTTTGGCATAAGATTCTCCCGAATAACATAGTG
ATTCATGCCTAGGGTGAACAGCCCGGCTGTTTTGTGAGCAAACGATCTATCCAGAAGTGCAGTGATAACATCGAAGCATC
ACTTGGTCCTACCGGCCGGCT---TTGTATACATGCTAAAATCAGCATGACACCAAGCCTATAAATCCTTGCGATATCAG
AGAGCTTTGCAGCCATACCCCACGCACACAATAGACCTCCCACATATATCTGAAGTAGTAATAAGTAGTAAGACGCAGAT
GACCTCTCAGAAGACATCATGGCCGGAGTTGGTGTACATGCCGGCGACGCCGGCAGTGATGACCATCAACAGCGAGAGAC
CTGACTTGACGACGGAGGTGCTCCAGATTGGGATCAGCCCAAGCCCGCCGGAGTTCGACTCGACACGTGTCTGCGTCTTC
CTCGACCCACGAGACAAGCTTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATCCAACGGAGCGTTTCTCTTAAGCA
ATACATAGCAGAGTTGAAACAAACGGGGCCGGTTGGCGATATGCCCCGGCAGGGATCATATATGTAGCTCATCGTGTCGT
TCTTACATTATGGTTTTTCTAATAAATGGTCCGCTAAATAAGTGGTAGGGCAAGTATTAGCGGAAGAGAATTTCCGTGTG
ACCTTTGAACGATAGTTCCTCCCCAACAGTGCTCCTGTGTGCACTCTCGCTTTTGGCGCTGCCACGTAAATATAGTGCAG
GCGTCGGCCGCACGTTCGCCGTGTGTATGTCCGCGCTTCTGAGTCAAAACCAGCCGACTCAGTTGCTGGGTGAAGAATGT
TGCATAGCCTACGTGAAAATCAAAGAGGAGAGCTCAGCCTATAAATCCATTGCAATAC-GAGAGACGTGTGCAACCACAC
CGCAAGG------------------TATATCTGCAGCAGTAGTAGGAACACACA---AGATGAGCTCT-GGAAGACGTCT
TTGCCGGAGTTGGTGGGCATGCCGGCGACGCTGGCGGTGATGACCATCAACAGCCAGAAGCCAGACTTGATGGCCGAGGT
GCTCCAGATTGGGATCAGTCCAAGCCCGCCCAGCTTCGACTCGACACGTGTCTGTGTGTTCCTCGACCAACGAGACAAGC
TTAGCCTTGTTGCAGCCGTCCCTGTCGTTGGCTAGCTACATAGCTGTGTTTTTCTAAGGAAGCTACATGGTAGAGTTTAT
CTATAACCTCCTTAGAGACGGGGTGGTTAACGATATG----CCCTGCTGGCGATC-------------------------
------------ATATATGTAGCTGTATGTGTCGTTTTCTGTGCTTATGGTTTTTGGAATAAATGGTTTCAC--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGAATAAG
TTGTAGGGTCCAGCATACAATTCATTTAGGAAATTGCATGTTCTCAATAGTTTTGTTGATTGATAATGGTGTTTTATTTC
ATCATAAATATATGTGAGACATATCTTTTCCATTACCCCATGGGAATG----ATCATCATACGAAAGCATTTCCTCAATA
AAAATAACAA------------------ATCCTATGGAGCACACATATGG--TATAGAGCACCTTACAGGCGCTACAGAG
CGCTCGCCATCTGATCCGGA-TGTTGCTGAGTGTACTCATTGTAATATATTACGGTGAGATGTGGTTTGATGGAATGTAG
ATATTTGTCTTAATGAATGGGGAAATTAAAGTAAAAATAGATATGATTTATTTATATATGTATTGAGTTAGATCTTTTCC
CATGCATGTTAAGACGAGCATTTTCCTGCATATTTGCATGTTGATGTGCCATGTGTGCAGTTGAGAGAAACAAATTAGTA
GGGACCAACTATTTAGTCGTATAGAATATCGTCAATGTGCATATTGCAACTAAATGTATGCCCAATAATGGTCGACATGA
CCAACATCCCAAATCAACTCGCGTTCTT-TTCCTCTCACTAAAATAAAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1B_518
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TTATCTAATAAAGAAATGG
GAAGAACACTTCAATTGTTGAATGGACAAATTAATATGTGGCCCAATGCGTTCTGGCTGTAGGGTGTACGGTTTAAACCG
GATGTAGTTTAGTTTGCATGTTCTGCA-ATGTAACTCACAAGGCAAGTTTCTCAATCCTATCGTTAGAAAGACATCTAGG
AGTAAAACAATCCAACTTTGCTCAGTAGCTGAATTTACCAACTTCCCCTCAATGACCAAAGCTAAATACCAACTGGGCCC
-TAATTTGCCTTAACC--ATCTTTTTTTATTCTCGAAATGATCTATTTTTTGGCATAAGATTCTCCAGAATAACATAGTG
ATTCATGCCTAGGGTGAACAGCCCGGCTGTTTTGTGAAGAAACGATCTATCAAGAAGTGCAGTGATAAAATCGAAGCATC
ACCCGATCCTGCCGGCCTGCTAAATTAAGCATGACACCA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCATTTAAATCCTTGAGACATCCGAGAGCTTTG--CAGCCACAC
CCCACGCACGCAAAGACCTCACACATATATCTGAAGTAGTAATAAGTAGTAAGACACAGATGACCTCTCAGAAGACATCA
TGGCCGGAGTTGGTGTACATGCTGGCGACGCCAGCAGTCATGACCATCAATAGCGAGAGACCGGACTTGACGACGGAGGT
ACTCCAGATTGGTACCAGCCCAAGCCCACCGGAGTTCGACTCGACACGTGTTTGCATCTTCCTCGACCCACGAGACAAGC
TTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTCCATAGCAGAGTTTCTTTTATGGAG-TACATAGCAGAGTTCTA
CTATA--TCCCGTAGAAACAGGCCTGTTGGCCATATG----CCCCGGTGGGGTTC-------------------------
------------ATATATGTAGCTCATCGTCTCGTTTTTACA--TTATGGCTT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1A_548
TTTTTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAATGGACGAGTTAATATATGGTGGAATGCATTTGGGCTGTCGAGGGTACAGTTCAAACCG
GATGCAGCCGGGTTTGCATGCTCTTCATATATAACTCACAAGGCAAGTTTGTCTATCATATCGTTAGAA--------GAA
GG--AAACAATCTAACTTTGCTCATTAGCTGAATGTCCCAACTTTCGCTCAGAGACGAAAACAAAATGCCAAA-------
-----GTGCCTTATCCATATA-TTTTTTATTCACAAAAGGATTTATTTTTTGGAG--AGGTCCTCCTGAATAATTTAATG
ATTCATGCCTCGAGTAATCAGCCTCGCTGTTTTGTGAGCAAACGATCTATCCAAAAGTGA------AACATTGGAGCATC
ACCCGCTCATGCCGGCCTTTT---TTCTATATGCATGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCCTATAAATCCATTGCAATAT-CAGAGACTTG--CAACCACAC
CGCACGCAGAGTCCTCATATATCGATATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGAAAAGACGTCG
TGGCCGGAGTTGGTGGGCGTGCCGGCGACACCAGCGGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGT
GCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGGTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
TTGGCCTTGTTGCAGCCGTCCCTGTCGTTGGCTAGGTATATAGCAGAGTTTTTCTGAGGAGGCTACATGGCAGGGTGATC
T--TAT-CTCCTTAGAAACGGGGCGGTTGGCGATATATATAACCTGCGGGCGATC-------------------------
------------ATATATGTAGCTGTTTGTATCGTTTTCTGTGCTTACGGTTTGGTG----AATGGTTTCAC--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATAATAAG
TGCTATGGTCCAGTATACAAATCATATAGGAAATTGCATGTTCTCAATAAAATTGTTGATTGATAATGGTGTTTTATTGA
A-CATAAATATATGGGAGACATATCTTTTCCATTATCCCTTGTGAAAGAAAAATCATCATATGAAAGCATTTCCTCAATA
AAAATAACAATGTTTTGGATCTATGCAAATCCGATGGAACGCACGTACAGTAT--AGAGCACCTTCCTGGAGGTATGGAG
CGCTGGCCATCTGATCCGGACTGTTGCTGCCTGTACTGCTTGTAATATATTTCAGTGAGATTTGCTTGGATACAATTTTG
ATATT-GGCTTAATAAAATCAGAACTTGAAGTAAAAATAGATGTGATTTACTTATATATTTATTGAGTTAGTCCTTTTCT
CATGCATGTTAAAGACATGGATTTTC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr1B_853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ATTCATGCCTCGAGTAATCAGCCTCGTTGTTTCGTGAGCAAACGATATATCCAGAATTGA------AACATTGGAGCATC
ACCCGGTCATGCCGGCCCTTT---TTCTGTATGCATGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGCCTATAAATCCAATGAAGTAT-CAGAGACTTG--CAACCATAC
CACACGCAGAGCCTTCGTATATTGATATATCTAAAGCAATAGTCGGAACATACA---AGATGAGCTCTGGGAAGACGTCG
TGGCCAGAGTTGGTGGGCATGCCGGCGACACCAGCGGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGT
GCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGC
TTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATACATAGCAGAGTTTTTCTGAGGAGGCTACATGGCAGGGTGATA
T--TAT-CCCCTTAGAAACGGGGCGGTTGGCGATATA----ACCTGCGGGCGATC-------------------------
------------ATATATGCAGCTCTTTGTGTCGTCTTTTGTGCTTATGGCTTGGTG----AATGGTTTCAT--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATAATAAG
TG-TATGGTCCAGTATACAATTTATTTAGGAAACAGCATGTTCTCAATACAATTGTTGATTGATAATGGTGTTTTATTGA
---------------------TATCTTTCCGTTGACCCTTTGTGAAAGGAAAATCATCATACGAAAGCATTTCCTCAATA
AAAATAACAATGTTTTGGATCTATGAAAATCCTATGGAACACACGTACAGTAT--AGAGCACCTTCCTGGTGCTATGGAG
CGCTGGCCGTGTGATTCGGAGTGTTGCTGCGTGTACTGGTTCTAATATATTTCAGTGAGATTTGGTTGGATAAAATGTTG
ATATT-GGCTTAATAAAACCATAACTTTAAGTAAAAACAGATGTGATTTATTTATATGTTTATTAAGTTAGTCCTTTTCT
CATGCACGTTAAGACAAGCATTTTCATGCATATTTGCATGTTGAGCTGGCATGTGTGAAGTTTAGAGAAACAAATTAGTA
A-GATCAACCATTTAGTCATATGGAATGTGGTCGAAGTGCCAATTGCAACTAAACTTATGCCCAATTGTGGTCGACCCGA
CCTACATCACATATCAACTCGGCTTCTTCTTCATCTCACTTAAATAAAAGGAATCAGGACAGCTGAATAATGGAGGGAGA
GTGGCGATGGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACCCAC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CCAGGGCCGCGAGATATTGCTG
GCAGCGGGCCAAGGATGTCAAAGACCTTGCTCAAACGTGCAATCCCTGCTGCCATCTCACC
>SNPs
---------------------------S---S-------S-SSSSSSS--------------------------------
---------------------------------------------------------------------S-------SSS
-SSSS---------------------------S----------------------------SSSS------------S-S
SS----------------------------------------S-----SS--SSSSS-SS-S-S-S-SSSSS-SSSSSSS
--SSSSSSSSSS------S--------S------S--------------SS----------------------------S
-----------S---------------------------S--------------S-------------------------
---------S-------------S----SS----S-S-------------------------------------------
------------S------------S-------------------------------S------S--------------S
---------------S---------------------------S------------------------------S-----
-------S---------------------S----------------S--S--------------S-------------S-
--------------S------------------------------------S----------------------------
------------------------------------------------S-------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
S-------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------S-----------
-------------------------------------------------------------------------S----S-
--S---------------------------------------------S-----------------S-------------
------S-------------------------------------------S----------------------S------
-------------S------S-----S-S-----S--------------------S------------------------
--------------SSSSSSSSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S--
----------------------------------------------S--------S-----
>forward_315
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GCACGTACAGGACTACAGGG-----
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>reverse_2954
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------AACCCGA
CCTACATCCCATAAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
