>input_sequence_75474
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----ATGCGGCGTCGGTTCCGGGCAACGGCGGCGGCAGATGGAGCTCGGGCGCGGGTCATAGCCATCCATGGCGGCACTG
ATGGAGGAGATGCAAGCGAGGAATTGGATGCGGGGGAGGCCGAGAACGGGCAGCGGAGCATGCTCCCGTTCAGGTCCAGC
CGGAACCGAGGCGGGGCTGGAGGCAACGACAGTGGTGAACTCGTGCTTCGGCGGTGGCGCTGGTTCACTGTGACAAAAAG
AAACGAGATGAAGCGGATGGTCAGGGAAGAGCAGCGAGAGGAGGAAAGGAAAGA--AGGCGCGGAGGGACGTCGACGTGA
CCTGGGCGTCTCGCCTGCCTTGCACAAACGGGAAGATGGAGGCGTGACAGCTCGGGAGGTCGAGGAGGCAGGGGCTGGTT
CAGGCGGCTTGAGGAAGAAGCAGAGGAGGAGCCCGGCTTGCTCCGGTCTGGTGGTTGCGCTGGTTGGGTGGACGACGGGA
TCCAGGGAAGCACTAGTGAGGAGGAGGTGCTCGGGCGGCGGCTCGGGGTCGAGCTCCTCTCGATCCGGATCAAGGAGGGA
GCGGGAGGCAGGGCGCTGTAG-----------------------------------------------------------
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>chr1A_1_TraesCS1A01G175300
CGGAAAGAAGCACACAA-CATAGTAAACAACCAACACATGAACATGGCATGATGCACAATCAAGTATGATGCATGTCCGG
TTT-AATGAA-----GCATGGCATGGCAAAGTGCACAAACAAACCTACAAATTAAGTGGAGCACAATATGCCGCGGAGTT
GCATATTGAAGAAAACACCACATG--ACTTATTTAGTTCTCTCTTGTTTAGGTACTCAACAATATTAAATGTTGTTAG-C
ATGGCAAGAGG-TGAAGCATAAT-GAAACTATCT-ATCTAGACAAGTTTAAATGAGGCCGGAACAACAAA-CAACAAGTC
CGGAAAAATCCTCATGTGCATATTTT-GGTTATGGTACTGATCTGCCCTAAACACAATTTT-AGAGTTGTTAAACATGCA
AAGTAAGGCCACCATGTTAAACTAGGATTTTTTCTACCCCATTTACATATAAAGTTTATTAAATTCGGAGTTACGGTTAT
TTAGTTATGAATTAAAGCATTTTTTTCATGGCATAGG-AGCAAATTTAACCAAACAACATTTTAAATATTTTTAACATGG
ATGAAAGTTGCAAATTGTTAATCTACACAAAATTCTAAGCAAGTTTCATATATTAAGTTTTTACAAAAGATGCACGGTTG
GTGAGCTATGATATGCATGGAGCTTAGGGGTTTGTCTGCAAATCTGTAAATCCCTGGTTAAATATCAAATTCG-CAGAAC
C----AAAAAAAACCACTGGGCCGAAACTGT--CTGGCCCAGCT--ACAT-----AGGGGGGGTGTTTGGCGGCTGCTCA
CCACTGGGCCTTGACCCAACTAGTGGAGAGGGAAGGCCTGCAGCGGGCGCGCAACTAGGCCTGCTAGCGCTGCGCTCGGT
CAACGCGTGAGCGAGACGAGCAGGCGAGCTGCTGCTGTTTGTTTCT---GAAGAACAGAAACAACAGCACGTCCAGGGTG
ATGTAGGCGACGACGACAGGAGGGGTCCCGGCGACGGGGACGGCGGGAACG----------GGCGGGAACGGGCGGATCG
AGTCATGCGGCGTCGGTTCCGGGCAACGGCGGCGGCAGATGGAGCTCGGGCGCGGGTCATAGCCATCCATGGCGGCACTG
ATGGAGGAGATGCAAGCGAGGAATTGGATGCGGGGGAGGCCGAGAACGGGCAGCGGAGCATGCTCCCGTTCAGGTCCAGC
CGGAACCGAGGCGGGGCTGGAGGCAACGACAGTGGTGAACTCGTGCTTCGGCGGTGGCGCTGGTTCACTGTGACAAAAAG
AAACGAGATGAAGCGGATGGTCAGGGAAGAGCAGCGAGAGGAGGAAAGGAAAGA--AGGCGCGGAGGGACGTCGACGTGA
CCTGGGCGTCTCGCCTGCCTTGCACAAACGGGAAGATGGAGGCGTGACAGCTCGGGAGGTCGAGGAGGCAGGGGCTGGTT
CAGGCGGCTTGAGGAAGAAGCAGAGGAGGAGCCCGGCTTGCTCCGGTCTGGTGGTTGCGCTGGTTGGGTGGACGACGGGA
TCCAGGGAAGCACTAGTGAGGAGGAGGTGCTCGGGCGGCGGCTCGGGGTCGAGCTCCTCTCGATCCGGATCAAGGAGGGA
GCGGGAGGCAGGGCGCTGTAGGAGACTGGCTCGATCGTTGGATCCTCGATCCGATGGTCGGGATGGAAGGGTGGCCTGGA
TCAGATCTGGTGGGATGGTGGCTGAAAACGAGGACGAGACCAGGTGGGTGGCGGGATGGATCCCGAGAGAGTGGCGGCGG
GGATGGGACAAGGGAGCTAGATTTAGGGTTGGACTGGGTGGACTGCTATATATACCAGCATGTAGATAGTGAAGGAAATA
TGCCCTAGAGACAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCAGAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAC
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTGGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCTGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGATCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ACTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGTATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTTCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATATCTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr1A_1
CGGAAAGAAGCAAACAATCATGGTAATCAACCATCACATAATCATGGCATGATGCACAATCAAGTATGATGCATGTCTGG
TTA-AATGATATATGGCATGGCATGGCAAAGTGCACAAACAACACTACAAGTTAAGTGGAGCTCAATATGCAAC-GAGTT
GCATATTGATGG-AACACCACATTCAAGTTATGTAGTTCGATCTCGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGCAAGAGGGTGAAGCAAAGT-AAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCCGGAAGCAACGAACAACAATTC
CGA-TAAATCCCCATATGCATATATT-AGGTTTGTTACTGTTCTGCCCTAAACACAATTTT-TGAGTTGTTAAATATGCA
AAGTAAAGCCATCATGATAATCTAGGCATTTTTCTACCCCATTTACATATAGAGATTATTTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAATCATTTTAA-CATGGCAATATGGGAAAATATATGCAAACATCATTTTAAACATTTTAAACATGG
CTGAAAATGACATATTATGAAACTACACAAAATTCTAAGCAACTTTCATGTTAAGTTTGTTTAAATCCGATGCATGGTTA
AAGAGTTATTATATGCATGAAGTTAGAGGGTTTTTCTGTAAAACTACAATTCCCCAGTTAATTAGCAAAACATAGAGG-C
CA--GAAAAAAATGGAATGGGCCGAAACTGG--CAGGCCCAGAGGTGCACAGGGGA--GGCTGG-------GGCTGCTCA
CCACTGGGCCTTGGCCCAACTAGTGGAGAGGGAAGGCCTGCAGGGGGCGCGCAGCTAGGCCTGCTAGCGCTGCGCTCGGT
CAATGCGCGAGCGAGACGAGTGGGTGAGCTGCTGCTGTTTGTTTTT---GAAGAACAGAAATAGCAGCACGCCCATGGAG
ATGCAGGCGATGACGGCAGG-GGGGTCCCAGCGACGGGGACGGCGGGAACC----------GGCGGGAACGGGCGGATCG
AGTCGTGCGGCGTCGGTTCCGGGCAACGGCGGCGGCAGATGGAGCTCGGGCGCGGGACACAGCCATCCATGGCGGC----
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>chr1A_1
CGTAAAGAAGCAAACAATCATGGTAATCAACCATCACATAATCCTGGCATGATGCACAATCAAGTATGATGCATGTCCGG
TTA-AATGATACATGGCATGGCATGGCAAAGTGGACAAACAACACTACAAGTTAAGTGGGGCTCAATATGCAAC-GAGTT
GCATATTGACGG-AACACCACATTCAAGTTATGTAGTTCGATCTCGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGCAAGAGGGTGAAGCAAAGT-AAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCCGGAAGCAACGAACAACAATTC
CGG-TAAATCCCCATATGCATATATT-AGGTTTGGTAATGTTCTGTCCTAAACACAATTTTTTGAGTTGTTAAACATGCA
AAGTAAAGCCATCATGATAATCTAGGCATTTTTCTACCCCATTTACATATAGAGATTATTTAAAACCGAGCTACGGTTAT
TTAGTTACGAAATAAATCATTTTAA-CATGGCAATATGGGAAAATATATGCAAACATCATTTTAAACATTTTAAACATGG
ATGAAAATGACATATTATGAAACTACACAAAATTCTAAGCAACTTTCATGTTAAGTTTGTTTAAATCCGATGCACGGTTA
AAGAGTTATTATATGCATGAAGTTAGAGGGTTTTTCTGTAAAACTATAATTCCCCGGTTAATTAGCAAAACACAGAGG-C
CA--GAAAAAAATGGAATGGGCCGAAACTGG--CAGGCCCAGAGGTGCACAGGGGA--GGCTGG-------GGCTGCTCA
CCACTGGGCCTTGGCCCAACTAGTGGAGAGGGAAGGCCTGCACGGGGTGTGCAGCTAGGCCTGCTAGCGCTGCGCTCGGT
CAACGCGCGAGCGAGATGAGCGGGTGAGCTGCTGTTGTTTGTTTCT---GAAGAACAAAAACAGCAGCACGCCCATGGAG
ATGCAGGTGACGACGGCA-G-GGGGTCCCAGCGACGGGGACGGCGGGAACC----------GGCGGGAACGGGCGGATCG
AGTCGTGCGGCATCGGTTCCGGGCAACGACGGCGGCTAATGGAGCTCGGGCGCGGGACACAGCCATCCATGGCGGC----
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>chr5A_1
CGGAAAGAAGCACACAA-CATAGTAAACAACCACCACATAAGCATGGCATGATGCACAACCAAGTATGATGCATGTCCGG
TTTTAAAGATACATGGCATGGCA----AAAGTGCACAAGCGATCCTACAAATTAAGTGGAGCTCAATATGCAA---AGGT
GCATATTGACGA-AACACCACGA-CAAGTTATTTAGTTCGATATTGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGCAAGAGGGTGAAGCAAAATAAAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCCGGAAACAACGAACAACAATTC
TGG-TAAATCCCCATATGCATATTTTAAGGTTTGGTACTGTTCTGCCCTAAACACAATTTT-AGAGTCATTAAACATGCA
AAACAAGTACACCATGTTAAACTAGGCATTTTTCTACCCCATTTACATATAAAGATTAATTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAAGCATTTTAG-CATGACATAGG-AGCAAATTTAAACAAACATTATTTTAGACATTTTAAACATGG
ATGGAAGTGGCATATAATTAACCTACACATAATTCTAAGCATTACTCATATATAATTCATTTAGATCCGATGCACGGTTG
TGAAGTTATTAAATGCATGAACTGCAAGGGTGTTTCTGCAAAACTGGCAACACTCAGATAAATAGCAAAATCG-TAGA-C
AAGTGAAAAAAACACATTGGGCCAAAACCGAGGCTGGCCCAACA--GCACAGGGGA--GGGGGGCTTTGGCGGCTGCTCA
CCATTGGGCCTTGGCCCAACTGGTGGAGAGGGAAGGCCTACAGGGGGGGCGCAACTAGGCCTGTTAACCCTACGCTCGGT
CAACGCGCGAGCGAGAGGCGCAGGCGAGCTGCTGCTATTCGCTTCT---GAAGAACAGAAACAGCAGCACGTCCATGGTG
ATGCAGGAGACGACGGCAGG-GGGGTCCCGGCGACGGGGACGGCGGGAACC----------GGCGGGAACGGGCGGATCG
AGACGTCCGGCGTCGGTTCCGGGCAACGGTGGCGG---------------------------------------------
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>chr5A_1
CGGAAAGAAGCAAACAATCATGGTAATCAACCATCACATAATCATGGCATGATGCATAATCAAGTATGATGCATGTCCGG
TTA-AATGATACATGGCATGGCATGGCAAAGTGCACAAACAACACTACAAGTTAAGTGGAGCTCAATATGCAAC-GAGTT
GCATATTGACGG-AACACCACATTCAAGTTATGTAGTTCGATCTCGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGCAAGCGGGTGAAGCAAAGT-AAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCCGGAAGCAACGAACAACAATTC
CGG-TAAATCCCCATATGCATATATT-AGGTTTGGTACTGTTTTGCCCTAAACATAATTTT-TGAGTTGTTAAACATGCA
AAGTAAAGCCATCATGATAATCTAGGCATTTTTCTACCCCATTTACATATAGAGATTATTTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAATCATTTTAA-CATGGCAATATGGGAAAATATATGCAAACATGATATTAAATATTTTAAACATGG
ATGAAAATGACATATTATGAAACTACACAAAATTCTAAG-AACTTTCATGTTAAGTTTGTTTAAATCCGATGCACGGTTA
AAGAGTTATTATATGCATGAAGTTAGAGGTTTTTTTTGTAAAACTATAATTCCCCGATTAATTAGCAAAACACAGAGG-C
C--A-GAAAAAATGGAATGGGCTGAAACTGG--CAGGCCCAGAGGTGCACAGGGGA--GGCTGG-------GGCTGCTCA
CCACTAGGCCTTGGCCCAACTAGTGGAGAGGGAAAGCCTGCAGGGGGCGCGCAGCTAGGCCTGCTAGCGCTGCACTCGGT
CAACGCGCGAGCGAGACGAGCGGGTGAGCTGCTGCTGTTTGTTTCT---GAAGAACAGAAACAACAACACGCCCATGGAG
ATGCAGGCGACGACGGCAGG-GGGGTCCCGGCGACGGGGACGGCGGGAACC----------GGCG----------GATCG
AGTCATGCGGCGTTGGTTCCGGGCAACGGTGGCGGCAGATGGAGCTCGGGCGCGGGACATGGC-----------------
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>chr5A_1
CGGAAAGAAGCACACAA-CATAGTAAACAACCACCACATAAGCATGGCATGATGCACAACCAAGTATGATGCATGTCCGG
TTTTAAAGATACATGGCATGGCA----AAAGTGCACAAGCAATCCTACAAATTAAGTGGAGCTCAATACGCAA---AGGT
GCATATTGACGA-AACACCACGA-CAAGTTATTTAGTTCGATCTCGCTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGTAAGAGGGTGACGCAAAATAAAAACTACCT-ATCTAGTCAAGGTTAAACGAGGCCGGAAACAACGAACAACAATTC
TGG-TAAATCCCGATATGCATATTTTAATGTTTGGTACTGTTCTGCCCTAAACACAATTTT-AGTGTTTTTAAACATGCA
AAACAAGTACACCATGTTAAACTAGGCATTTTTCTACCCCATTTACATATAAAGATTAATTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAAGCATTTTAG-CATGACATAGG-AGCAAATTTAAACAAACATCATTTTAGACATTTTAAACATGG
ATGAAAGTGGCATATAATTAACCTACACATAATTCTAAGCATTACTCATACATAATTCATTTAGATCCGATGCACGGTTG
TGAAGTTATTAAATGCATGAAGTGCAAGGGTGTTTCTGCAAAACTGACAACACTCAGATAAATAGCAAAATCG-CAGA-C
AAGG-GAAAAAACACATTGGGCCAAAACTGAGGCTGGCCCAATA--GCACAGGGGA--GGGGGGGTTTGGCGGCTGCTCA
CCATTGGGCCTTGGCCCAACTGGTGGAGAGGAAAGGCCTGCAGGGGGCGCGCAACTAGGCCTATTAACCCTACGCTCGGT
CAACGCGCGAGTGAGAGGCGCGGGGGAGCTGCTGCTGTTTTCTTCT---GAAGAACAGAAACAACAGCACGTCCATGGTG
ATGCAGCAGACGATGGCAGG-GGGGTCCCGGCGACGGGGACGACGGGAACC----------GGCGGGAACGGGCGGATCG
AGACGTCCGGCGTTGGTTCCGGGCAACGGTGGCGG---------------------------------------------
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>chr7A_1
CGGAAAGAAGCAAACAATCATGGTAATCAACCATCACATAATCATGGCATGATGCACAATCAAGTATGATGCATGTCTGG
TTA-AATGATACATGGCATGGCATGGCAACGTGCACAAACAACACTACAAGTTAAGTGGAGCTCAATATGCAAC-GAGTT
GCATATTGATGG-AACACCACATTCAAGTTATGTAGTTCGATCTCGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGAAAGAGGGTGAAGCAAAGT-AAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCTGGAAGCAACGAACAACAATTC
TGG-TAAATCCCCATATGCATATATT-AGGTTTGGTACTGTTCTGCCCTAAACACAATTTT-TGAGTTGTTAAACATGCA
AAGTAAAGCCATCATGATAATCTAGGCATTTTTCTACCCCATTTACATATAGAGATTATTTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAATCATTTTAA-CATGGCAATATGGGAAAATATATGCAAACATCATTTTAAACATTTTAAACATGG
ATGAAAATGACATATTATGAAACTACACAAAATTCTAAGCAACTTTCATGTTAAGTTTGTTTAAATCCGATGCACGGTTA
AAGAGTTATTATATGCATGAAGTTAGAGGGTTTTTCTATAAAACTATAATTCCCCGGTTAATTAGCAAAACACAGAGG-C
CAGA-AAAAAAATGGAATGGGCCAAAACTGG--CAGGACCAGAGGTGCACAGGGGA--GGCTGG-------GGCTGCTCA
CCACTGGGCCTTGGCCCAACTAGTGGAGAGGGAAGGCCTGCAGGGGG--CGCAGCTAGGCCTGCTAGTGCTGCGCTCGGT
CAACGTGCGAGCGAGACGAGCGGGTGAGCTGCTGCCGTTTGTTTCT---AAATAACAGAAACACCAACACGCCCATGGAG
ATGCAGGTGACGACGGCAGG-GGGGTCCCGGCGACAGGGACGGCCGGAACTGGTGGGAACAGGCG----------GATCG
AGTCATGCGGCATCGGTTCCGGGCAACGGCGACGGCAGATGGAGCTCGTGCGCGGGACACAGCCATCCATGGAGGC----
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>chr5A_3
--GAAAGAAGCACACAA-CATAGTAAACAACCACCACATAAGCATGGCATGATGCACAACCAAGTATGATGCATGTCCGG
TTTTAAAGATACATGGCATGGCA----AAAGTGCACAAGCAATCCTACAAATTAAATGGAGCTCAATATGCAA---AGGT
GCATATTGACGA-AACACCACGA-CAAGTTATTTAGTTCGATCTCGTTTATGTACCCAACAATATTAAATGTTGTTAAAC
ATGGCAAGGGGGTGAAGCAAAATAAAAACTACCT-ATCTAGTCAAGGTTAAATGAGGCCGGAAACAACGAACAACAATTC
CGG-TAAATCCCCATATGCATATATTAAGGTTTGGTACTGTTCTGACCTAAACACAATTTT-AGAGTTATTAAACATGCA
AAACAAGTACACCATGTTAAACTAGGAATTTTTCTACCCCATTTACATATAAAGATTAATTAAAACCGAGCTACGGTTAT
TTAGTTATGAAATAAAGCATTTTAG-CATGACATAGG-AGCAAATTTAAACAAGCATCATTTTAGATATTTTAAACATGG
ATGAAAGTGGCATATAATTAACCTACACATAATTCTAAGCATTACTCATATATAATTCATTTAGATCCGATGCACGGTTG
TGAAGTTATTAAATGCATGAAGTGCAAGTGTGTTTCTGCAAAACTGGCAACACTCAGATAAGTAGCAAAATCG-CAGA-C
AAGG-GAAAA-ACACATTGGGCCGAAACCGAGGCTGGCCCAACA--GCACAGGGGAGGGGGGGGGTTTGGCGGCTGCTCA
CCATTGGGCCTTGGCCCAACTGGTGGAGAGGGAAGGCCTGCAGGGGACGTGCAACTAGGCCTGTTAACCCTACGCTCGGT
CAACACGCGGGCGAGAGGCGCGGGCGAGCTGCTGCTGTTCGCTTCT---GAAGAACAGAAACAACAACACGTCCATGGTG
ATGCAGGAGACCACGGCAGG-GGGGTCCCGGCAACGGGGATGGCGGGAACCGGCAGGAACGAGCG----------GATCG
AGACGTCCGATGTCGGTTTCGGGCAACGGTGGCGGACGT---AGCTCGGGTGCGGG------------------------
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>chr5A_3
--GAAAGAAGCACACAA-CATAGTAAACAACCATCACATAAGCATGGCACGATGCGCAAACAAGTATGATGCATGTCCGG
TTT-AAATATGCATGG-----CATGGCAAGGGGCACAAACAAAACTACAAGTTAAGTGGAGCTCAATATGCAAT-GAGTT
GCATATCGATGG-AACACCACATG--CCTTATTTAGTTCTCTCTCGTTTATGTACTCAACAAAATTAAATGTTGTTAG-C
ATGGCAAGAGGGTGAAGCATAAT-AAAACTATCTAATCTAGGCAAGTTTAAATGAGGCCGGAACAACAAAACAACAAGTC
CGG-TAACTCCTCATGTGCATATTTT-AGGTTTGGTACTGTTCTGCCCTAAACATAATTTT-AGAGTTATTAAACATGCA
AAACAAGTACACCATGTTAAACTAGGCAT-TTTCCACCCCATTTACATATAAAGTTTAATAAATTCGGAGTTACGGTTAT
TTAGTTATGAAATAAATCATTTTAG-CAAGTT-ATTTAAGCAAATTTAAACAAATAACATTTTAAGCATTTTAAACATGG
ATGAAAATGACATATTATAAAACTAGAAAAAATTCTAAGCAACTTTCATCTTAAGTTTGTTTAAATCCAATGCATGGTTG
ATGAGTTTTTATATGCATGAAGTGCAAGGGTTTTCATGCAAATATGTAAAACCCCGGTTAATTAACAAATTCG-CAGAAC
C--A-AAAAAAACCCACTGGGCCGAAATTGT--CTGGCCCAGCT--ACAC-----A--GGGGGGGTTTGGCGGCTGCTCA
CCACTGGGCCTTGGCCCAACTGGTGGAGAGGGAAGGCCTGCAGGGGGGCG------------------------------
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>chr2A_3
--GAAAGAAGCAAACAA-CATAGTAAACAACCACCAAATAAGCATGGCATGATGCACAACCAAGTATGATGCATGTCCAA
TTT-AATGAA-----GCATGGCATGGCAAAGTGCACAAGCAATCCTACAAATTAAGTGGAGCTCAATATGCAAC-GAGTT
GCATATTGATGG-AACACCGTGTG--ACTCATTTAGTTCTCTCTCGTTTAGGTACCCAACAATATTAAATGTTATTAAAC
ATGGCAAGAGG-TGAAGCATAAG-AAAACTACCT-ATCTAGGCAAGTTTAAATGAGGCCGGAACAACAAA-CAACAAGTC
CGG-AAACTCCTCATGTGCATATATT-AGGTTTGATACTATTCTACCCTATACACAATTTT-AGAGTTGTTAAAAATGCA
AAGTAATGCCACCATGTTAAACTAGGCA-TTTTCTACCCCATTTACATATAAAGTTTGTTAAGTTCGCAGCTACGGTTAT
TTAGTTATGAATTAAATCATTTTAG-CATGGC-ATTTAAGCAAAATTAGACAAACAGCATTTTAAACATTTCAAACATGC
ATGGAAGTTGGATATTATGAAACTAGATGAAATTCTAGTCATATTACATATTAAGTTTGTTTAATTTGGATGCGGGGTTT
GAGAGTTATTAAATGCATGAAGTTTAAGGGCTATACTGTAAAACTGACATCTCTGGATAAATAGGAAAAACCTTCAGAAC
T----AAAAAAACGTAATGGGCCGAATCCGAGGGTGGCCCAACA--GCACAGGGGGG---------TTGGCAGCTGCTCA
CCACTGGGCCTTGGCCCAACTGGTGGAGAGGGAAGGCCTGCAGGGGGCGCGCAGCTAGGCCTGCTAGCCCTGCGCTCGGT
CAACGCGCGAGCGAGACGAGCAGACGAGTAGCTGCTGTTCTCATTCCTGAAGAAACAGACACAGGACCAGAACCATGGCA
AAGGAGAA---GACAACGGAAGGGGTCCTGGCGACGGGGTCGACGGGAACCGACCGGAGCGTGGCGGAT-----------
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>chr6A_1018
GGCAC---------------------------------------------------------------------------
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---------------------------GGCGGCTGCAGATGGAGCTCGGGCGCGGGGCACACCCATCCATGGCGACGCTG
ACGGAGGAGATGCAGGCGAGGAAATGTACGCGGGGGAGGCCGAGAACGGGCAGCGGAGCATGATCCCATTCAGGTCCAGC
CGGAAGCGAGGCGGGGCTGGAGGCAACGACGGTGGTGAACTAGTGCTTCGGCGGTGGCGCTGGTTCACTG--ACAAAAAG
AAACGAGACGAAGCGGATGGTCAGGGAAGAGCAGCGAGAGGAGGAAAGGAAAGAGAAGGCGCGGAGGGATGTCGACGTGA
CCTGGGCGTCTCGCCTGCCTTGCAAAAACGAGAAGATGGAGGCGTGATAGCTCAGGAGGTCGAGGAGGCAGGGGCTGGTT
CGGGCGGCTTGAGGAAGAAGCAGAGGAGGAGCCCGGCTTGCTCCGATCTAGAGGCTGCGCTGGTTGGGTGGACGACGGGA
TCCAGGGAAGCACTGGTGAGGAGGAGGTGCTCGGGCGGCCGCTCGGGGTCGAGCTCCTCTCGATCTGGATCAAGAAGGGA
GCGGGAGGCAGGGAGCTGTAGGAGACTCGCTCGATCGTTGGATCCTCGATCCGATGGTCGGGATGGAAGGGTGGCCTGGA
TCAGATCTGGTGGGCTGGTGGCTGAAAACGAGGACGAGACCAGGTGGGTGGCGGGATGGATCCCGAGAGAGTGGCGGCAG
GGATGGGACAAGGGAGCTAGATTTAGGGTTGGACTGGGTGGACTGCTATATATACCAGCATGTAGATATGAGGGA-----
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>chr1A_1769
CCAGCGGTAGTACT------------------------------------------------------------------
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----------------------------------------------------------------------GAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGAAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAGTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCTGGTAACGAGATTGAACTAGGTATTGAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTTTGACCGATAAAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr1A_1780
ATAG--------CT------------------------------------------------------------------
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----------------------------------------------------------------------GAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAAAATTGTATT
AACCGGAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCAATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACATAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCTG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TCTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr1A_1782
--------------------------------------------------------------------------------
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-------------------------------------------------------------------AGTGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATACCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTGTTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCATAG
AATATGTAGGAGCCAATATGAGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr4A_1784
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---------------------------------------------------------------------TGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAAACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACATGT
>chr4A_1784
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---------------------------------------------------------------------TGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACATGTGTGAATACATAGACAAACAAAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTATAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATAAGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr5A_1784
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---------------------------------------------------------------------TGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACTTGTGTGAATACATAGACAAACAAAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGGCTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAACGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr5A_1784
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---------------------------------------------------------------------TGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCAGAAACATAATACATGTGTGAATACATAGACAAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGCTTAACAGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGTATTGCAACTAATGAGTTAGT
TGTAAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTAATAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAATGTATGTTGTTATGCGGTCTGACCGATAGAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr5A_1784
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---------------------------------------------------------------------TGAAGGAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACTTGTGTGAATACATAGACAAACAAAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACAAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTTGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>chr2A_1784
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---------------------------------------------------------------------TGAAGAAAATA
TGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATT
AACCGGAAACATAATACTTGTGTGAATACATAGACAAACAAAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAAT
CGAAGATGGTTATGTTTCCTAACCATAAACAAAAGAGTTGTTATTTGATTAACGGGATCACATCATTAGGAGAATGATGT
GATTGACATGACCCATTCCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGT
TCCTATGACTATGAGATTATGCAACTCCCGTTTGCCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGG
TGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACTCCG
ATTGTTGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAACTAATGAGTTAGT
TGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATTAAGATACCGACGATCG
AATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTCTGACCGATAAAGATCTTCGTAG
AATATGTAGGAGCCAATATGGGCATCCAGGTCCCGCTATTGGTTATTGACCGGAGACGTGT
>SNPs
---------------------------------S-----S-S--------------------------------------
--------------------------------------------------------------S--------SS-S-----
---------S--S-------------------------------------------------------------------
------------------------S----------------S--------------------------------------
---S-----------------------S-S-S--------S---------------------------------------
---------------------------S----------------------------------------------------
-----------------------SSS-----------------------S----------------------S-------
------------S---S----S--------------------S----------S-SS-S----S-SSS------------
-----S---S---------S--S---S------S--------------------S---------S---------------
------------S------------------------------------S-------------S----------------
-------------S-----------------------------S------------------------------------
-------S-------------------------------------------------------------------S----
---S----------------------------------------------S-----------------------------
--------------------------------------------------------S-------------------S---
-S------------S--------S--S-S---------------------------------S----S------------
-----S------------------------S----------S----------------------------SS--------
--------S------------------------------------------------------------S----------
------------------------S-----S----------------S-----S--------------------------
-S-------------------------------------------S---S-S--S-------------------------
--------------S------------------------S-------------------------S--------S-----
-------------S-------------S----------------------------------------------------
--------------S---------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------------------------------------------------------------S------------
---------------------------------S----------------------------------------------
---------------------------------S----------------------------------------------
-------------S------------------------------------------------------------------
-S------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
-----S-------------------------------------------------------
>forward_770
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------------------------------ACTGTCTGGCCCAGCTACAT------------------------------
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>reverse_1628
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---------------------------GGCTCGATCGTTGGATCCTC---------------------------------
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-------------------------------------------------------------
