>input_sequence_75402
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---------------------------------------------------AAACGCGCCGGATCAGCAACAGCCGACAG
ATTCGACCTTCCAAGTTCGGCCAGAACGCGAGAGAGTCCCGGAGCTCTCAAGATGGCTTCCAAGATCGCCGCCACGGCGG
CGAAGGTGCCAGCGAAGACGAAGGGCCAGTGCATCTGCTCGCCCACCGACCACCCTGGCTCCTTCCGGTGCCGGCTCCAC
CGCGCCAGCGGTATGCCCAGGTCGATCTCGTGCCAGCAGTTCGGTGACCCCCACACGGCGAGCTCGCCGCTGGTCTCCTC
CGGCCACATGCCAAGGTCGGCATCTCAGCAGCAGTTCACGGCTCCTTCCGGCTCCGGCATTTTGAGATCGGCGTCCCAAC
AGCAGCTCCCGCGCTCCCTCGGTGTGCCAAGATCGGCATCGTGGCAAGATTCTGCTCACGAGAATTGAACAAACCTCCTG
AACCAGGATGTTCTTTTTTCATAGCTTAAGTTCAGAAACTACCGATGTAACT---TTTTTAAAGATTTTTTTTTCTTTTT
TTGAAGCGCTAGATAGTTGTAATTAGCACTTTAGTCTTACGACGACACAAT--------------------------TTT
AGAGACAATGGAATAAA---------------------------------------------------------------
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>chr2B_1_TraesCS2B01G377600
CACTACGCTCTCCATTCCCTCTGCTCCTTCTCAATTCCAAGCACTTAACGAGCCTCAAGCCAAGATGAACAGCGCGGCCG
AGACGGACGCCGCCGGCGAGAACGGCAACCCCGCCGCCCCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTT
GAGCAGTCCATGTCGCGGGGCCTCCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCAT
CTGGTCCCCGGTCAACAAGATCCCCAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCC
GGGCGCGGGCCGGGAGCAGGCTCAAGGACGCTGCCGGCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGG
CGGGACGGCTCTTTCCTCGACCTCCACGAGACGGCGAGCAGGGCGAAGCTGGACTTATCGCCGCCGCTGCCATCGCCTGC
CCCCACCAAGGTAGTTCCCTGCACATGAACCCCTCCAAGCTTAAGCTAGCTCTCCGAATCTGCCATTGG-GTTACGAGGT
TTCTGTTGGCTTGGGTTCTTCAGGAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGGCACCGC
CGGTCCCGGCCGGCTCCCCTGCTCCAGATGATGCTTCCAATGCTCTGAAGTCTGAATCCACCGACCGACCGATCGATCGA
TCGCGCCCGCGACTTCCTTGTTCTTCTGATTGATTATTGA----TGAGTTCGAGCGTATTGTACAACAGATTAGATCGTC
AGATCGATTGTTTGTAAGTTGCCTGTCA-----TATAACTATCACCAGTTAAGTTTCTCCATTCAGTTTGCGTCCTACTT
TTCCGTCAGTTAGTTTCGGTTTGCAACCCATCTGACACGGTTTCTGATGGAATCGTAACGAACCTGAATTC-GACTCGAA
ATCCACCCTGCAATTCCGTTATAAATTCCCCGTGGGAATCGCAACTAAAACAAACGCGCCGGATCAGCAACAGCCGACAG
ATTCGACCTTCCAAGTTCGGCCAGAACGCGAGAGAGTCCCGGAGCTCTCAAGATGGCTTCCAAGATCGCCGCCACGGCGG
CGAAGGTGCCAGCGAAGACGAAGGGCCAGTGCATCTGCTCGCCCACCGACCACCCTGGCTCCTTCCGGTGCCGGCTCCAC
CGCGCCAGCGGTATGCCCAGGTCGATCTCGTGCCAGCAGTTCGGTGACCCCCACACGGCGAGCTCGCCGCTGGTCTCCTC
CGGCCACATGCCAAGGTCGGCATCTCAGCAGCAGTTCACGGCTCCTTCCGGCTCCGGCATTTTGAGATCGGCGTCCCAAC
AGCAGCTCCCGCGCTCCCTCGGTGTGCCAAGATCGGCATCGTGGCAAGATTCTGCTCACGAGAATTGAACAAACCTCCTG
AACCAGGATGTTCTTTTTTCATAGCTTAAGTTCAGAAACTACCGATGTAACT---TTTTTAAAGATTTTTTTTTCTTTTT
TTGAAGCGCTAGATAGTTGTAATTAGCACTTTAGTCTTACGACGACACAAT--------------------------TTT
AGAGACAATGGAATAAACTAATGCTGAGATACACAGGAAAAATCTGGTAGAAGAACCTGAACAACAGGATGGTTCTTCTC
TTTGCGGCTAACGGTGATGATTCCCGACAGAAATAACTACAAGCTCTCGTCAAATACTCCACTACTTGAAAACTAGTGCT
AGGAAGACTACATCTCATCTATCTCACCCTCTCCACCAC----GACACTTAGCAATAGCAGCTGCCCCTGACAGTGTACT
GCAGAGTTATCAATACACATCCACCATGCGCGCTTGCAAACGAATGAAGCTATGATCCTTTTTCTGAAGAAGAAACAAGG
CCAGAATTAGTG--TATAAAACCTCTGGATTATCAGACAAAACAGCCTAATGTGGATTGTGGAGATTAGC----------
------------------------------------------------CATCTATTTATAAGTGATGCCTAGTGAAGTTG
TGATTTGTCTCTACTTAACAAAGGTTACCGAAGAAATTATACGTTTACAGAATGGATAGCATGGATAT------------
-TGGATCATATCATTTACTCCCGCGGCTGTGAATTTGTAGCAGTGTATTTGTACAAGAACATGAGTTTGTTAATTGACAA
ACCTAGCCGTGTTGCATAATATATTGAAAAAACAT---------------------------------------------
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----------------------------------------------------------------------TAACGAAAGC
TACTGGGAGATATTTCAACCATGAGACTATGA-------ACACTTGCCTGATCAATCATCACCATCTTACTTTTTATTTG
CGGGACTCCACCAGTATGTAAACTGGCTTTCCATCGAGCTTGTAGAAATCCTGCAGAATATACAAAGTTAATAAATTTGA
AAGGGTGGCTGGGCCATGCCTCTCTTGGAAATATGTGTTTTCCATGTATTAAATACATTTGCTAGATTTAAAAACAAAGC
TATGTGATGTACTTGGGCCGGAGGGAGTATTCACCGTAGTCAGTTTAATAAAAAAGTTTGATCGATGTGTATATTCTTGA
TGCCATCATAAAATTAATGAAAAGCTTCCATTGTGGGGGGGAAAA-----------------------------------
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-----------------------------------------------------GAGTATGCATGTAGTGTTTCTGCTAGT
GGTATATTTTACAAACACAATCTT
>chr2D_1
CACCACGCTCCCCCTTCCCTCTGCTCCTTCTCAATTCCAAGCACTTCACGAGCCTTAAGCCAAGATGAACAGCGCGGCCG
AGACGGACGCCGGCGGCTACAACGGCAGCCCGGCCGCCCCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTT
GAGCAGTCCATGTCGCGGGGCCTCCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCAT
CTGGTCCCCGGTCAACAAGATCCCGAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCC
GGGCGAGGGCCGGGAGCAGGCTCAAGGACGCTGCCGGCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGG
CGGGACGGCTCTTTCCTCGACCTCCACGACACCG---GCAGGGCGAAGCTGGACTTGTCGCCGCCGCTGCCATCGCCTGC
CCCCACCAAGGTAGCTCCCTGCACATGAACCCCTCAAAGCTTGAGCTCGCTCCCCGAATCTGCCATTAGCGTTACGAGGT
TTCTGTTGGCTTGGGTTCTTCAGGAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGGCACCGC
CGGTCCCGGCCGGCTCCCCTGCTCCAGATGATGCTTCCAATGCTCTG--------ATCCG----TCGACCGATCGATCGA
TCGCGCCCGCGACTTCCTTGTTCTTCTGTTTGATTATTGATCGATGAGTTCGAGCGTATTGTACAACAGATTAGATCGTC
AGATCGATGGTTTGTAAGTTGTCTGTCA-----TGTAACTATCACCAGTTAAGTTTCTCCATTCAGTTTGCGTCCTACTT
CTCCGTCAGTTTGTTTCGGTTTGCAACCCATCTGACACGGTTTCTGATGGAATCGTAACGAACCTGAATTC-GACTCAAA
ATCCACCCTGCAACTCCGTTATAAATTCACCGTGGGAATCGCAACTAAAACAAACGCGTCGTATCAACAACAGCCGACAG
ATTCGACCTTCCAAGTTCGGCCGGAACGCGAGAGAGACCCGGAGCTCTGAAGATGGCTTCCAAGATCGCCGCCACGGCGG
CCAAGGTGCCAGCGAAGGCGAAGGGGCAGTGCATCTGCTCGCCCACCGACCATCCTGGCTCCTTCCGGTGCCGGCTCCAC
CGCGCCAGCGGTATGCCGAGGTCGGTCTCGTGCCAGCAGTTCGGTGACCCCCACACGGCGAGCTCCCCGATGCTCTGCTC
CGCCCACATGCCGAGGTCGGCATCGCAGCAGCAGTTCACGCCTCCTTCCGGCTCCGGCATTTCGAGATCGGCGTCCCAGC
AGCAGCTCCCGCGCTCCGCCGGTGTGCCAAGATCGGTATCGTGGCAAGATTTTGCTCACAAGAACTGATCAAACCTCCTG
AACCAGGCTGTTCTTTTTCATAGCTT--AGTTCAGAAACTACCGATGTAACTCCGTTTTCTAAGATTTTTTTTTCATTTT
TTAAG------GATAGTTGTAACTAGCACTGTAATCTTACGACCACACAAT--------------------------TTT
AGAGACAATGGAATAAACTAATGCTGAGATACACAGGAAAAATCTCGTAGAAGAACCTGAACAACAGGATGGTTCTTTTC
TTTGCGGCTAACGGTGATGATTCCCGACAGAAATAACTACAAGCTCTCATCAAATACTCCACTACTGGAAAACTAGTGCT
AGGAAGACTACATCTCATCTATCTCACCCTCTCCACCAAGAAAGACACTTAGCAATAGCAGCTGCCCCTAACAGTGTACT
GCAGAGTTATCAATACACATCCACCATGCGCGCTTGCAAACGAATGAAGCTGTGATCCTTTTTCTGAAGAAGAAACAAGG
CCAGAATTAGTGTATATAAAACCTCTGGATTATTAGACTAAACAGCTTAATGTGGATTGTGGAGATTAGCTTA--ATGTG
GATTGTAGAGAATAGCTTAATGTGGAACTTCTAAACGAAGTAACCAAGCATCTATTTATAAGTGATGCCTAGTGAAGTTG
TGATTTGTCTCTACTTAACAAAGGTTACCGAAGAAATTATACGTTTACAGAATGGGTAGCATGGATAT------------
-TGGATCATATCATTTACTCCCGCGGCTGTGAATTTGTAGCAGTGTATTTGTACAAGAACATGAGTTTGTTAATTGACAA
ACCTAGCGGTGCTGCATAATATGTTGAAAAAAGAT---------------------------------------------
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----------------------------------------------------------------------TAACAAAGAC
TACTGGGCGATATTTCAACCATGAGACTATGA-------ACACTTGCCTGATCAATCATCATCATTTTACATTTTATTTG
CGGGACTCCACCAGTATGTAAACTGGCTTTCCATCGAGCTTGTAGAAATCCTGCAGAATATACAAAATTGATAAATTTGA
AAGGGCAGCTGGGCCATGCCTCTCTTGGAAATATGTGTTTTCCATGTATTAAATTGATTTGCTAGATTTAAAATAA----
-------------------------------------------------------------------TGTATATTCTTGA
TGCCATGGTAAAATTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTATGCATGTAGTGTTTCTACTAGT
GGTATATTTTACAAACACAATCTT
>chr2A_1
CACCACGCTCTCCATTCCCTCTGCTCCCTCTCAATTCCAAGCACTTGTCCAGCCTTAAGCCAAGATGAACAGCGCAGCAG
AGACAGACGCCGGCGGCGACAACGGCAACCCGGGCGCCGCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTG
GAGCAGTCCATGTCGCGGGGCCTCCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCAT
CTGGTCCCCGGTCAACAAGATCCCCAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCC
GGGCGCGGGCCGGGAGCAGGCTCAAGGACGCTGCCGTCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGG
CGGGACGGCTCTTTCCTCGACCTCCACGACACCG---GCAGGGCGAAGCTGGACTTATCGCCGCCGCTGCCGTCGCCTGC
CCCCACCAAGGTAGTTCCCTGCACATGAACCCCTCCAAGCTTAAGCTAGCTCCCCGAATCGGCC-TTGG-GTTACGAGGT
TTCTGTTGGCTTGGGTTGTTCAGGAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGCCACCGC
CGCTCCCGGCCGGCTCCCCTGCTCCAGATGATGCTGCCAATGCTCTGAAGTCTGAATCCG----CCGACCGATCGATCGA
TCGCGCCCGCGACTTC-TTGTTCTTCTCTTTGATTATTGG----TGAGTTCGAGCGTGTTGTACAACAGATTAGATGGTC
AGATCGATGGTTTGTAAGTTGCCTGTCATGTACTGTAACTATCACCAGTTAAGTTTCTCCATTCAGTTTACGTCCTACTT
TTCCGTCAGTTTGTTTCGGTTTGCAACCCATCTGACACGGTTCCTGATGGAATCGTAACGAACCTGAACTCTGACACGAA
ATCCACCCTGCAATTCCGTTATAATCTCCCTGTGGGAATCGCAACAAAAACAAACGCGCCGGATCAACAACACCCGACAA
AATCGACTTT-CAAGTTCGGCCCGAACCCA--AGAGTCCCGGAGCTCTGAAGATGGCTTCCAAGATCGCCGCCACGGCGG
CGAAGGTGCCAGCGAAGGCGAAGGGGCAGTGCATCTGCTCGCCCACCGACCATCCTGGCTCCTTCCGGTGCCGCCTCCAC
CGCGCCAGCGGTATGC--AGGTCGGTCTCGTGCCAGCAGTTCGGCGACCCCCACACGGCGAGCTCCCCGCTGCTCTGCTC
CGGCCACATGCCGAGGTCGGCATCGCAGCAGCAGTTCACGACTCCTTCCGGCTCCGGCATTTTGAGATCGGCGTCCCAGC
AGCAGCTCCCGCGCACCGCAGGTGTGCCAAGATCGGCATCGTGGCAAGATTTTGCTCAGAAGAACTGATCAAACCTCCTG
AACCAGGCTGTTCTTTTTTCATAGCTTAAGTTCAGAAACTACCTATGTAACT---TTTTTTTAGAA-TTTTTTCCCTTGT
TTGAAGCGCTAGATAGTTGCAACTAGAGCTGCAATCTTAGGGCGATATAATTTTAGAGACAATAATGTTCAAAAAAATTT
AGAGACAATGGGATAAACTAATGCGGAGATACACAAAAAATTCTCATAAAAAGAACCTGAACAGCAGGATGGTTCTTTTC
TTTGCAGCTAACAGTGGTGATTCCCGACAGAAATAGCTACAAGCTCTCATCAAATACTCCACTACTGGAAAACTAGTGCT
AGGAAGACTACATCTCATCTATCTCACCCTCTCCACC----AAGACACTTAGCAATAGCAGCTGCCCCTGACAGTGTACT
GCAGAGTTATCAAGACACATCCACCATGCGCTCTTGCAAAGGAATGAAGCTGTGATCCTTTTTCTGAAGAAGATAAAAGG
CCAGAATTAGTACTCAG--AACCTCTGGATTATTAGACTAAACGGCACATGCTCTCCTGTTTCAGAAAAAGGCGGATGTG
GATTGTGGAGAATAGCTTAATGCGGAAGTTCTACACGAAGTAACTAAGCGTCTATCTATAATTGATGCCTAGTGAGGTTG
TCATCTGTCTTTACTTAAGAACGGTTACTCAAGAAATTACACATTTACAAAATGGATAGTGTCGATAGATAGCATCACCC
CTGGATAGTATCATTTACTCCTCAATTTGTAAT--------AGTGTATTTGTACAAGAACATGAGTTAGTTAATTGAT-A
ACCTAGCCGTGTTGTATAATATGTTGAAAAAACATGAGTGAATTCCAGTTTTTACCCCTAAGTTTAACATTCTTGATGCT
AATTACCCCATTTAAGAGAATTTCATCCATTATACCCTATTTAACATAAGTGTTGCCACAAATTACCCTTTTCTATTTTT
TGTGAGTGTTCTGATTGGTGGGCCCCGATTACCAGGTCCACATGGCGTGCCACATCGTCGGTTTTTTCCTTGGCGATTTT
TCTACAGGCTGAACCGATTCACTTAAATGGGGTAATTTGTGGCAACACTTTTGTTAAATGGGGTATAATGGATGAAATTC
TCTTAAATGGGGCAATTAGCGTCAAGGATGTTAAACTTAGGGGTAAAAACTGGAATTCACTCAAAAACATTAACAAAAAC
TACTGGGGGATATTTCAACCATGAAACTATGAACACTTCACACTTGCCTGATCAATCATCATCATTTCACTTTTT-----
--GGACTCCACCAGTATGTAAACTGGCTTTCCATCGAGCTTGTAGAAATCCTGCAGAATATATGAAGTTAATAAATTTGA
AAAGGCAGCTGGGTCACGCCTCTCTTGGAAATATGTGCTTTCCATGTATTAAATACATTTGCTAGATTTAAAATGAAGCT
ATACAATATATTTA--------------------CGTAGTCAGTTTATTAAAAAAGTTTGAATAATGTGTATATTCTTGA
TGCGATGATA-------TGAAAAGCTACCATTGTTGGGGGGT--------------------------------------
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-------------------------------------------------------------ATGTAGTGTTTCTACTAGT
GGAATATTTTACAAACACAA----
>SNPs
---S------------------------------------------S--------S------------------------
------------S------S-----------S------------------------------------------------
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-----------------------------S--S-SSS-------------------------------------------
----------------------------------------------------S---------------------------
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-----------------------------------------------------------SSSSS----------------
----------------------------S---------------------------------------------------
--------S-------------------------S---------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------S-------------------------S-------------------------------
-----------------S-------S--------------------------S---------------------------
-----------------S------S----------------------------------------S------S---S---
------------S-----------S---------------S-------------------------------------S-
-----------------SS--------------------------------S-------S----S---S-----------
-------S----------------------------------------------------S--------------S----
----------------------S-------S--S----------------------------------------------
---------------------------------------------S-------------------------------S--
------------------------------------------------S-----------------S-------------
--------------------------------------S-----------------------------------------
---------------------------------------------------S----------------------------
---------------------------------S----S-------S---------------------------------
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----------------------S---------------------------------------------------------
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--------------------------------------------------------------------------S---S-
-------S-----------------------------------------------------S---S--------------
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-----SS------------------------------------------------------------------SS--SSS
SSSSSSSSSSSS-SSSSSSSSSSSSSSSSSSSSS-------------S-------------SSS----------------
------S-------------------S-------S------SSSS-----------------------------------
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--------------------------------------------------------------------------S-----
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>forward_56
------------------------------------CCAAGCACTTAACGAGCCTC------------------------
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>reverse_1678
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-----------------------------------------------------------------------------CTC
TTTGCGGCTAACGGTGA---------------------------------------------------------------
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