>input_sequence_75365
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-----------------------------------------------------ATGTACTTGGATAGCATCGTGGCAAAA
CAAGTTTGCTACAGGTTCAATGATCACGATCGTTCCATATCATTACCGAAGGAGTTACAGAAAGAGGGTACACTCATAAT
GGCACAGATGTCAAATTACTCTAATTTGGGTTTTAATCCCAAAGCACATAACCAGATAACCGTCGGAGATGATGTTATTA
GAAGACATTACCAGGTGCTCTTAGGGATTGCTAATATGGATCTGTCTCAGGAAGAAAATGTTGACATCAGCTTGAAACAG
ACCCTTCTCTTCTTTGTTCTGCTAGCCGAAGCACTACGGTTTCCCGAGCTCGAAAAGTGGTTACTGAATATCTTGGCAAA
GAAGTTGGAAATGTCAGTCCCGGTTAGTATAACCAAACTCTTCAACAGTTGGGGAACGCTCTCCAAGATTCTTCATAAAG
GCAGAGAAAATTTCAGCATTGGCAATATTACTGTTGAGCTGCTGAAGAGTAACTGTAAAACATATGATGATGTATGTTCC
ATATTGGGAATAGCGAACAAAATTAACTTGAGAAAATTGGAGAAAAAGAAGAAGAAGAAGAACAGGCTCTAA--------
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>chr6A_1_TraesCS6A01G119400
CGCAAGCAGCCTCCTTCAACATTTGTCCTCTGCAGTCTTGATAGGGTGTCTTGCTCTAATGGTTCTTGATTAGAGTGGGA
GAAAACAAAGAAGCATGTCTTATGCATTGTAAATTTGTTGTGCAGTGGATTCATT-GCATTGTAA------ATTTGACAG
TACAGTGTCAATGTGACATGCCCA------AAGTTCAGAGCCATATCTTGCAATATATAGGGCATTGACTCAAAATAAGC
GCTTACGATTAGAAGGCAGTCTGGCAGTGGGAATTACACTTTGATAATTTTTATTTATCTCTTAGCGAGAAATATATGTT
CAATTTCTTTGAGTGTATTTAGCTCTACATGTGGAGGTACTCAAAGTTTTCTCTTATCTCTTGTCTGAAGGTTGTGATGA
AGATAAGTAGCATTATAACTTGAGGTTATCTTGTCAAAAGAAATTGAGTTGCAAAAGATAAGTTGCACGATGAGTTAATT
GTCTAAGTGATCTTGTTGCTAGTTGCTATGCGTAATTGTCTAAGTGCAAGTGATCTGGTGTAAGTGATTCGGCTACTAAG
TAGCATGATAACTTAATTGTTTAAGCGATCTGGTTGCTGGTACTTGCTATTCTTAATTTTCTAAGTGCAAATTGATAGTT
GATAAGTTGACATATGACGACTACTCGACGTTTGGTGGATGAGAGGCTCTCCTGTTTTAGCATGGTTGCTAGGTTGTCTA
TTAGCTCTTGATTGTCCTATAGAATGACCTCTTAGATACATGCTTTAATTTCAATTGTTTTGCAGGGATCTCCAATCTTT
AATGTTTACTTGGACAACATCGAGAGTTCCTTCAGGACAACATTCAATGGAGTCAGACAATACTTCAAATTGATCCTCCA
AAGAGACAATGTGCAACTCCCAGAGGGAAAATTGGTGACTCATCCCAAGGGTTGGATCATTTTAAGGATCAGCCCTTCGG
CATCCTCTCATGTCTGCTCAGAGTCAGTATATGCACTGTACAGAACACATGATATGTACTTGGATAGCATCGTGGCAAAA
CAAGTTTGCTACAGGTTCAATGATCACGATCGTTCCATATCATTACCGAAGGAGTTACAGAAAGAGGGTACACTCATAAT
GGCACAGATGTCAAATTACTCTAATTTGGGTTTTAATCCCAAAGCACATAACCAGATAACCGTCGGAGATGATGTTATTA
GAAGACATTACCAGGTGCTCTTAGGGATTGCTAATATGGATCTGTCTCAGGAAGAAAATGTTGACATCAGCTTGAAACAG
ACCCTTCTCTTCTTTGTTCTGCTAGCCGAAGCACTACGGTTTCCCGAGCTCGAAAAGTGGTTACTGAATATCTTGGCAAA
GAAGTTGGAAATGTCAGTCCCGGTTAGTATAACCAAACTCTTCAACAGTTGGGGAACGCTCTCCAAGATTCTTCATAAAG
GCAGAGAAAATTTCAGCATTGGCAATATTACTGTTGAGCTGCTGAAGAGTAACTGTAAAACATATGATGATGTATGTTCC
ATATTGGGAATAGCGAACAAAATTAACTTGAGAAAATTGGAGAAAAAGAAGAAGAAGAAGAACAGGCTCTAAGGCAAGCA
TTTTCTTTCTTTACTTCATTGGAAATTCGAAATACTTGTCACATGCAGTACTGCTTTACTTGACAATAGCACTGTTTTCT
TCAACAGTAGGGGATGTTTATTGTGCTTCTACCTCGCTTTGCAGGTCATCATAGATGTTACAAAGCTGGTCCATATTTAG
CTGTTGAGCAAGGCCTTCAGCAGGCATGTTAATAATGTTGAGCTTCGTCTCTCTATATAGCGTCTGTCCGTCTTGAGTCT
ACATAGGTACAGCTTCTGAATCATCCATG-TGCTGCTTCAAAGTGCAAAGCTTTGTCATTCAGAAATATGGGCCAGCTTT
ATAGTGTCTCGATATCTGTCTGTAGTGTTTAACAATCACTGTGCCTTTATAGTGTACTAGTAAGTGTTCAACATCGTTTG
TCTGGATAGTGTCTCGATATCTGTCTGTAGTGTTTAACAACCACTGTGCAAATGTATACATTGCATAACTTGGAGATAGA
TATATGTTACATGCTAGCCCGGTCTCCATCTATTTGTACCTAACCATGGAATCTCTTTCCCTTAACTCTCATATTGCTGT
ATATTCTGTAAATGATAGCCAAAGCTGCAAAGTTTGAAATTATAACTGGGATTGTTCCAAATAAGATTCCTGGAGGCTTG
GTTAGTCTGCAATATGCGAATGACACGATCTTGTTCCTAGAGCCAAACCCTCGAAATGCTAGGAATATTAAATGGCTGCT
TTCTTGTTTTAATCACCTATCTGGCATGAAAATTAATTATGATAAATGTGATTTGGTGACTGTCAATCTGGGGGAGGATG
TTGCTAAACAACTCTCACAAAGTTTTTGTTGTAGGTTGGGAGATTTTCCCGCGACACTTCTTACCTCCTGGATGATCTGG
AAGCACCACAACGATTGCGTCTTCAACGACGCACGCCCTTCCATCCGGACGCTAGTTCACGGCATCAAGGAGGAGGCCAA
ACTTTGGGCTACGGCAGGCGCTGCTGGACTCAG
>chr6D_1
CGCAAGCAGCCTCCTTCAACATTTGTCCTCTGCAATCTTGATAGGGTGTCTTGCTCTAATGGTTCCTGATTACAATGAGA
GAAAACAAAGAAGCATGTCTTATGCGTTGTAAATTTGTTGTGCAGTGGATTCATTTGCATCAGGGAGAAGTATTTGGCAG
TACAGTGTCAATGTGACATGT----ACACCAAGTTCAGAGCCATATC-TGCAATATATAGGGCATTGACTCAAAATAAGC
GCTTACGATTAGAAGGCAGTCTGGCAGTGTGAATTACACTTTGATAACTTTTATTTATCTCTTAGCGAGAAATATATGTT
CAATTTCTTTGAGTGTATTTAGCTCTACCTGTGGAGGTAGTCAAAGTTTTCTCTTATCTCTTGTCTGAAGGTTGTGATGA
AGATAAGTAGCATTATAACTTGAGGTTATCTTGCCAAAAGAAATTGAGTTGCAAAAGATAAGTTGCATGATGAGTTAATT
ATCTAAGTGATCTTGTTGCTAGTTGCTATGCGTAATTGTCTAAGTGCAAGTGATCTGGTGTAAGTGATTCGGCTACTAAG
TAGCATGATAACTTAATTGTTTAAGCGATCTGGTTGCTGGTACTTGCTATTCTTAATTTTCTAAGTGCAAATTGATAGTT
GATAAGTTGACATATGACGACTACTCAACATTTGGTGGATGAGAGGCTCTCCTTTTTTAGCATGGCTGCTAGGTTGTCTA
TTAGCTCTTGATTGTCCTATAGAATGACCTCTTAGATACGTGCTTTAATTTCAATTGTTTTGCAGGGATCGCCAATATTT
AATGTTTACTTGGACAACATCGAGAGTTCCTTGAGGACGTCATTCAATGGAGTCAGACAGTACTTCAAATTGATCCTCCA
AAGAGACAATGTGCAACTCCCAGAGGGAAAATTGGTGACTCATCCCAAGGGTTGGATCATTTTAAGGATCAGCCCTTCGG
CATCCTCTCATGACTACTCAGAGTCAGTATATGCACTGTACAGAACACATGATATGTACTTGGATAGCATCGTGGCAAAT
CATGTTTGCTACAGGTTCAGTGATCACGATCGTTCCATGTTATTACCCAAGGAGTTATGCAAAAAGGGTACACTCATAAT
GGCACAGATGTCAAAATACCCTAATTTGGGTTTTAATCCCAAAGCACGTGGCCAGATAACCGTCGGAGATGATGTTATTA
GAGGACATTACCAGGTGCTCTTAGGCATTGCTAATATGGATCTGTCTCAGGAAGAAAGTGTTGACATCAGCTTGAAAGAG
GCCCTTCTCTTCTTTGTTCTGCTAGCCGAAGCTCTACGGTTTCCCAAGCTCGAAAAGTGGTTACTAAATATCTTGGCAAA
GAAGATGGAAATGTCAGTCCCGGTTAGTATAACCAAGCTCTTCAACAAATGGGGAACGCTCTCCCAGATTCTTCATAAAG
GCAGAGAAAAGTTCAATGACG---ATATTACTGATAAGATGCTGAAGAATAAATGTAAAACATTTAATGATGTATGTTCC
AAGTTAGGAATAGCGAACAGAATCAACTTGGGCAAATTGGAGAAAAAGAAGAAGAAGAAGAACAGGCTCTAAGGTAAGCA
TTTTCTTTCTTTACTTCATTGGAAATTCGAAATACTTGTCACATGCAGTACTGCTTTACTTGACAATAGCACTGTTTTCT
TCAACAGTAGGGGATGTTTATTGTGCTTCTACCTCGCTTTCCAGGTCATCATAGATGTTACAAAGCTGGTCCATATTTAG
CTGTTGAGCAAGGCCTTCAGCAGGCATGTTAATAATGTTGAGCTTCGTCTCTCTATATAGCGTCTGTCCGTCTTGAGTCT
ACATAGGTACAGCTTCTGAATCATCCATGCTGCTGCTTCAAAGTGCAAAGCTTTGTCATTCAGAAATATGGGCCAG----
--------------------------------------------CTTTA--------TAGTAAGTGTTCAACATCGTTTG
TCTGGATAGTGTCTCGATATCTGTCTGTAGTGTTTAACAACCACTGTGCAAATGTATACGTTGCATAACTTGGAGATAGA
CATATGTTACATGCTAGCCCGGTCTCCATCTATTTGTACCTAACCATGGAATCTCTTTCCCTTAACTCTCTTATTGCTGT
ATATTCTGTAAATGATAGCCAAAGCTGCAAAGTTTGAAATTATAACTGGGATTGTTCCAAATAATATTCCTGGTGATTTG
GTTAGTCTGCAATATGCGAATGACACGATCTTGTTCCTAGAGCCTAACCCTCGAAATGCTAGGAATATCAAATGGCTGCT
TTCTTGTTTTAATCACCTATCTGGCATGAAAATTAATTATGATAAATGTGATTTGGTGACTGTCAATCTGGGGGAGGATG
TTGCTAAAC-----------------------------------------------------------------------
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>chr6B_16
TCAA----------------ATTTGTCCTCTGCAATCTTGATAGGGTGTCTTGCTCTAATGGTTCCTGATTACAACGAGA
GAAAACAAAGAAGCATGTCTTATGCATTGTAAATTTGTTGTGCAGTGGATTCATT-GCATCAGGGGGAAGTATTTGACAG
TACAGTGTCAATGTGACATGCACACACACCATGTTCAGAGCCATATC-TGCAATATATAGGGCATTGACTCAAAATAAGC
GCTTACGATTAGAAGGCAGTCTGGCAGTGGGAATTACACTTTGATAGTTTTTATTTATCTCTTAGCGAGAAATATATGTT
CAATTTCTTTGAGTGTATTTAGCTCTACATGTGGAGGTAGTCAAAGTTTTCTCTTATCTCTTGTCTGAAGGTTGTGATGA
AGATAAGTAGCATTATAACTTGAGGTTATCTTGCCAAAAGAAATTG--TTGCAAAAGATAAGTTGCACGACGATTTAATT
GTCTAAGTGATGTTATTGCTAGTTGCTATGCGTAATTTTCTAAGTGCAAGTGATCTGGTCTAAGTGATTCGGCTACTAAG
TAGCATGATAACTTAATTGTTTAAGCGATCTGGTTGCTGGTACTTGCTATTCTTAATTTTCTAAGTGCATATTGATAGTT
GATAAGTTGACATATGACGACTGCTCGACATTTGGTGGATGAGAGGCTCTCCTTTTTTAGCATGGCTGCTAGGTTGTCTA
TTAGCTCTTGATTGTCCTATAGAATGACCTCTTAGATACGTGCTTTAATTTCAATTGTTTTGCAGGGATCGCCAATATTT
AATGTTTACTTGGACAACATCGAGAGTTCCTTGAGGACGTCATTCAATGGAGTCAGACAGTACTTCGAATTGATCCTCCA
AAGAGACAATGTGCAACTCCCAGAGGGAAAATTGGTGACTCATCCCAAGGGTTGGATCATTTTAAGGATCAGCCCTTCGG
CATCCTCTCATGACTACTCAGAGTCAGTATATGCACTGTACAGAACACATGATATGTACTTGGATAGCATCGGGGCAAAT
CATGTTTGCTACAGGTTCAGTGATCACGACCGTTCCATGTTATTACCCAAGGAGTTATGCAAAGAGGGTACACTCATAAT
GGCACAGATGTCAAAATACCCTAATTTGGGTTTTAATCCCAAAGCACCTGACCAGATAACCGTCGGAGATGATGTTATTA
GAAGACATTACCAGGTGCTCTTCGGCATTGCTTATATGGATCTGTCTCGGGAAGAAAGTGTTGACAGCAGCTTGAAAGAG
GCCCTTCTCTTCTTTGTTCTGCTAGCCGAAGCACTACGGTTTCCTGAGCTCGAAAAGTGGTTACTAAATATCTTGGCAAA
GAAGTTGGAAATGTCACTCCCGGTTAGTATAACCAAGCTCTTCAAAAAATGGGGAAAGCTCTCTCAGATTCTTCATAAAG
GCAGAGAAAAGTTCAACATTGACAATATTACTGATACGGTGCTGAAGAATAAATGTAAAACATATAATGATGTATGTTCC
AAGTTAGGAATAGCGAACAGAATCAACTTGGGCAAATTGGAGAAAAAGAAGAAGAAGAAGAACAGGCTCTAAGGTAAGCA
TTTTCTTTCTTTACTTCATTGGAAATTCGAAATACTTGTCACATGCAGTACTGCTTTACATGACAATAGCTCTGTTTTCT
TCAACAGTAGGGGATGTTTATTGTGCTTCTACCTCGCTTTCCAGGTCATCATAGATGTTACAAAGCTGGTCCATATTTAG
CTGTTGAGCAAGGCCTTCAGCAGGCATGTTAATAATGTTGAGCTTCGTCTCTCTATATAGCGTCTGTCCGTCTTGAGTCT
ACATAGGTACAGCTTCTGAATCATCCATGCTGCTGCTTCAAAGTGCAAAGCTTTGTCATTCAGAAATATGGGCCAG----
--------------------------------------------CTTTATAGTGTACTAGTAAGTGTTCAACATCGTTTG
TCTGGATAGTGTCTCGATATCTGTCTGTAGTGTTTAACAACCACTGTGCAAATGTATACGTTGCATAACTTGGAGATAGA
TATATGTTACATGCTAGCCCGGTCTCCATCTATTTGTACTTAACCATGGAATCTCTTTCCCTTAACTCTCATATTGCTGT
ATATTCTGTAAATGATAGCCAAAGCTGCAAAGTTTGAAATTATAACTGGGATTGTTCCAAATAATATTCCTGGTGGTTTG
GTTAGTCTGCAATATGCGAATGACACGATCTTGTTCCTAGAGCCTAACCCTCGAAATGCTAGGAATATTAAATGGCTGCT
TTCTTGTTTTAATCACCTATCTGGCATGAAAATTAATTATGATAAATGTGATTTGGTGACTGTCAATCTGGGGGAGGATG
TTGCTAAAC-----------------------------------------------------------------------
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>SNPs
----------------------------------S------------------------------S------S-S--S--
------------------------------------------------------------SSSSS---------------
---------------------S-------------------------S--------------------------------
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---------------------------------------S----------------------------------------
---------------------------------S----------------------------------------------
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-----------------------------S-----------------------S-----------S--------------
---------------------------------------S------------------------------S-----S---
--------------------------------S-----SS-------------------S--------------------
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------------S--S---------------------------------------------------------------S
--S----------------S------------------S-S------S---------SSS--------------------
---------------S---S---------------------------S-S------------------------------
-------------------------S-------------------------------S-------------------S--
S----------------------------------------------------------------S--------------
------------------------------------S----------SS---------------S---------------
----------S----S-----S-----------S-S--S---------S---S------------S--------------
-SS--S-------------S---S------S-S-----------------------------------------S-----
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----------------------------------------S---------------------------------------
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----------------------------------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
-----------------------------------------------------------S--------------------
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----------------------------------------------------------------S--------S--S---
--------------------------------------------S-----------------------------------
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---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_973
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-------------------------------------------------------------------------CCTTCGG
CATCCTCTCATGT-------------------------------------------------------------------
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>reverse_2534
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-----------------------------------------------------AGTTCACGGCATCAAGGAGG-------
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