>input_sequence_75324
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---------------------------------------------------------------------ATGGCTGTCAG
CAGCTGTAGCTTCTTGGCCATTGCCATGGCCCTCGCTCTCCTTAGCGGCCACATGGCCCACGCCGGCCGCCTCCTGGCGG
ACACCACGGAGGCAGCAGCGCCCACTGCAACGCCTGCCGCTGTCTCGGGCATCCCCGCACCGAAGCCGCCCGTGCCCACC
ATGCCTACAATGCCACCAGTGCCAACCGTACCCGCGCTCGCCACACCGCAGGTCACAGTGCCGCCGATGCCGGCCGTGCC
CGCGCTCACTGTCCCGCAGCTCACGGCGCCCCCCATGCCGGCCGTGCCCGCGATCACCGTGCCCCAGGTCACGTTGCCGC
CCATGCCGGCCGTCCCTGCGCTCACCGTGCCCAAGGTCACGTTGCCGCCCATGCCGGCCGTCCCCGCGGTCACTGTGCCC
AAGGTCACGTTGCCGCCCATGCCCGCAGTTGTTGTGCCGAAGGTGACGATGCCGCCAATGCCTGCAATTCCATCCATCTC
CATCCCCAAGGTGGCATTGCCTCCGATGCCTTCCATTCCCACTGTGAACGTGCCGATGCCATTCCTTGCGCCACCTCCTT
CAGCATAG------------------------------------------------------------------------
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>chr2B_1_TraesCS2B01G396200
GTGGATTGATGTCCTTCCTTCGCTAAGAGCCTCAAGGAGAATAGGGTGAGTCTTGGTGGCATCCGAGAAGCTTTGACTCT
CGCACCCCTCCAACAGAGATTAACACTCCTTAAGAGTGTAATCTTCGAAATACATCCTTGTCTCCAACTTGTTGTTTAAT
CTGTTCCCTTTGACCTTACTTTTGTGGGTGTGCTTGCTAGCTAATTGTTGCTCTTGCTTAACTTGTGTAGCTAGCTTTCC
ATTGCCATATAGGTTGTTTTTACCATTGTTGCATTTCTATAGAACCTATTTTATCCCCCAGAGTCTCTAAATTTCACCGC
CTAAAGAGAAAAATGGTGAAGGGTTAGATAGTGGTTTGGGTTTTTTAACACTTTAGGAAAATACGCAAATCACATACGCA
AGGAATGCTTTTCATAATAGGCCCTCTGTACCATGATATATGACGTTTAGTAGTTCAATACCCAGATAGGATCGTAGCCT
GTATGTGCTGCCAGTCAGAAAACCTCAGGGCTCTGTGTGTTGTTGTTTGTCAGGTTCAAGGCAAAGAACGAGTCAGCTCA
TTGATAAAAAAAGCTCC--TTTTAATCCCGATCATACACTGGAAGCAGTTAGAGGTGCT-------TTTGCATCTCAATT
ACGTACTTGACCAAATACCAGAGAAGCTCAATTTAGGCCAATCGTTGGCAAACCAATCTGATGCGCAGGTATTACTTCGG
AACCAGTAGGGAGTTGAACTAACTGATGACATTGAGTCACAGTGCGTGTCACTACGT-----CAATACCAGCTTCTCATC
AAACTGGCCTGA--------CCATCACCAACTCCAAACAGAACAGAAGTCGCTTTGCTTAATCTGGCCAACCACCAACCT
AATCACACCCCGATCTACCCATCATGTTAT-------CCTGCATAAATATGCATGCATGATCCCTGTTGTCTGCACCAAG
CAAGCTGAGAACCAATCCTGCACCCAATTACCCAGAAATCGGAGAGCACACTGCACACAGCTTCCTGAAATGGCTGTCAG
CAGCTGTAGCTTCTTGGCCATTGCCATGGCCCTCGCTCTCCTTAGCGGCCACATGGCCCACGCCGGCCGCCTCCTGGCGG
ACACCACGGAGGCAGCAGCGCCCACTGCAACGCCTGCCGCTGTCTCGGGCATCCCCGCACCGAAGCCGCCCGTGCCCACC
ATGCCTACAATGCCACCAGTGCCAACCGTACCCGCGCTCGCCACACCGCAGGTCACAGTGCCGCCGATGCCGGCCGTGCC
CGCGCTCACTGTCCCGCAGCTCACGGCGCCCCCCATGCCGGCCGTGCCCGCGATCACCGTGCCCCAGGTCACGTTGCCGC
CCATGCCGGCCGTCCCTGCGCTCACCGTGCCCAAGGTCACGTTGCCGCCCATGCCGGCCGTCCCCGCGGTCACTGTGCCC
AAGGTCACGTTGCCGCCCATGCCCGCAGTTGTTGTGCCGAAGGTGACGATGCCGCCAATGCCTGCAATTCCATCCATCTC
CATCCCCAAGGTGGCATTGCCTCCGATGCCTTCCATTCCCACTGTGAACGTGCCGATGCCATTCCTTGCGCCACCTCCTT
CAGCATAGGCACGAACCAGAGCACCGGGAGCGGGAATCTACGATGCTGGTTCAATGATTTTGGGAATGTTTACTTGATCA
TTTGATTTTGGCCATTTACCGTTGGCCAGCTTGTTTACATTGTGCGATTCCTATTTTGTTTTTG----------------
--TGTTTGTGTAGTATGTAGTAC--TATTGGGCTTGTCAATGGCCATCTCTTTTTCTTTCTCTTTGTACTGAGTTTTTAC
AATGAACATGTATGTCATTTTTATCACATTTA-----------CTGCTATGTACTTATTGAGCATTAGCCCCCCATGTGC
GGTCTAACTCCAACAAATCTGCCTTCTGACAAATGTGCATTTGAGCATTGATTTTTTTTATAACTCATCTCTTCCTTTAT
TCCATCAAAACGATCGTATCACTTGCAAGGAAGGGTGGCGAATCCATCCAGACAGGAGTAGAGTACTACTTAGCTATTTT
AGCTACATGAGCAGCCTGATTACAATGCTCAAACAAGACATGGTTAAAATCTTAAGACAGTCATCGATAATGGCACTTGC
TACTGAATTCAAGACACCTTCATTAAGATCATTGACAACCCTTCATTATCCGAGGCCACTTCAATCTTGCTGCAACCCAC
CATACGTGCCTTCTGACAAATATGCATTTGAGCCTTGAAAAGTTGAACACAAGTAGGAGTAC------------------
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-------------------------------------------GTACACAACTAGACTTGGAACATCTTTGACA------
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--------------------TACATTTATACATTCAAATCGTC--------------------GAATGCACGCTTCCATC
TTCATTTTGAGTGGAACGCCCAGAAAGATACATTTCTGCGGTGGCAGTATGCAATGCAGCTCCAATCGGAAGGACATCCT
CGTCGACAAAGAAATGTGGGTTGTGAGCAGAGTGGACCGAACCGACTTTCTCATTTCTAATACCGATACCAAACATAACG
CCAGGAACTAACTGTTGGTAGAATGCAAAGTCTTCCCCTGCCATGATCTTCTCTCCGGGCTTCACCTTGTCTGGACCAAG
CAAACTTCTGCCCACATTCTCTACAT
>chr2D_533
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----------------------------------------------------GGTTCAAGGCAATGAAAGTGTCAGCTCA
TTGATATGAAAAATACTCTTTTTAATCCCGATCATATACTGGAAGCTGTTGGAGGTGCCTTGCAAGTTTGCATCTCAAA-
---TACTTGACCAAATACCTGAAAAGCTCAGTTTAGGCCAATCGTTGGCAAACCAATCTGATGCGCAGGCATTACTTTCG
AACCAGTAGGGAGTTGAACTAACTGACGACATTGAGTCACAGTGCGTATCACTACGC-----CAATACCACCTCCTCATC
AAACTGGCCTGACCATCAGTCCATCACCAATTCCAAACAGAACTGAAGTCGCTTTGCTTAATCTGGCCAACCACCAACCT
AATCACACCCTGTTCCCATGATCATGCCAT-------CCTGCATAAATATGGGTGAACCATCCCGGTTGTCTGCACCAAG
CAAGCTGAGAACCAATCCTGCAGCCAGTTACCCAGAAATCTGAGAGCACACTGCCCACAGCTTCCTGAAATGGCTGTCAG
CACTGGTAGCTTCTTGGCCATTGCCATGGCCCTCGCTCTCCTTAGCGCCCACATGACCCACGCCGGCCGCCTCCTGGCCG
ACACCACGGAGGCAGCAGCGCCCACTGCAACGCCTGCCGCTGTTCCAGGCATCCCCGCACTGAAGCCGCCCGTGCCCACC
ATGCCTACAATGCCACCAGTGCCAACCGTGCCCGCGCTCACCACACCGCAGGTCGCAGTGCCGCCGATGCCGGCCGTGCC
GGCGATCACTCTCCCGCAGCTAACGGTGCCCCCCATGCCGGCCGTGCCTGCGATCACCGTGCCTCAGGTCACTTTGCCGC
CCATGCCGGCCGTCCCCGCGGTCACCGTGCCCAAGGTCACGTTGCCGCCCATGCCGGCCGTCCCCGCGGTCACCGTTCCC
AAGGTCACGTTGCCGCCCATGCCCGCCGTTGTTGTGCCGAAGGTGACGATGCCGCCAATGCCTGCAATTCCATCCATCTC
CATCCCCAAGGTGGTATTGCCTCCGATGCCTGCATTTCCCACTGTGAACGTGCCGATGCCATTCCTTGCGCCACCTCCTT
TGGCATAGGCACGAACCAGAGCACCAGGAGCGGGAATCTACATTTCC------------------ATGTTTACTAGACCA
TTTGGTTTTGGCCATTCACCGTTAGCCACCTTGTTTACATTATGTGGTTCCTATTTTCTTTGTG----------------
--TGTGTGTGTAGTATGTAGTACAGTATTAGGCTTGTCAATGGCCATCCCTTTTTCTTTCTCTTTGTATTGAGTTTTTAC
AGTGAACATATATGTCATTTT-ATCACATTTATGTCAGACATACTGTTATGCAATTACTGAGCAATAATTCGTCATGTGC
ATTCTAACTCCAACAAATCTGCTTTCTGACAAGTACTCCCTCCGTTCGGAATTACTTGTCGCAGAAATAGATGTATCTAG
ACATACATCCATTTCTGCGACAAGTAATTCCGAACTGAGGG---------------------------------------
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------------------AGTATAAGTTTGAGCAATCAACAGTTGAACACAAGTACTTCCTCCGTTCATAAACATAAGAT
GTTTTTGAGATTTCAATATGGACTACAGACAGGCTGAAATGAGTGACCAAACACACTAAAACGTGTCTATATACATCCAA
CTCAGAAAAAAGTTACTAGAAAATCTTATTTGTGAACAAAGGAGTACATAGCTAGACTGG--ACATCTTTGACATACTAC
CTCCGTTCCAAATTACTCTGTCGCTGAAATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATACGTGCGACAA
GTAATTCGGAACGTTGGGAGTACATTTATACATTCAAATCGTCCATCCAAAGAGCATTACCGCAAATGCACGGATCCAAC
TTCACTTTAAGCAGAACGCCCAGAAAGATACATTTCTGCGGTGGCAGTATGCAATGCAGCTCCAATTGGAAGGACATCCT
CGTCGACGAAGAAATGCGGGTTGTGAGCAGAGTGGACCGAACCGACTTTCTCATTTCTAATGCCGATACCAAACATAACG
CCAGGAACTAACTGTTGGTAGAATGCAAAGTCTTCCCCTGCCATGATCTTCTCTCCGGGCTTCACCTTGTCTGGACCAAG
CAAACTTCTGCCCACATTCTCTACAT
>chr2A_575
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----------------TCTTTTTAATCCCGATCATATACTGGAAGCTGTGGGAGGTGTTTTGCAAGTTTGCATCTCAAA-
---TACTTGACCAAATACCTGAAAAGCTCAGTTTAGGCCAATCGTTGGCAAACCAATCTGATGCGCAGGCATTACTTTCG
AACCAGTAGGGAGTTGAACTAACTGACGACATTGAGTCACAGTGCGTGTCACTACGTCAAGTCAACACCACCTCCTCATC
AAAGTGGCCTGACCATCA--------CCAACTCCAAACAGAACAGAAGCCGCTTTACTTAGTCTGGCCAACCACCAACCT
AATCACACGCCGATCTCCTGATCATGCTAGATGCTACCCCGCATAAATATGCATGCACGAATCCTGTTGTCTGCAGCAAG
CAAGCTGAGAACCAATCCTGCACCCAGTTACCCAGAAATCTGAGAGAACACTGCCCACAGCTTCCTGAAATGGCTGTCAG
CACTGGTAGCTTCTTGGCCATTGCCATGGCCCTCGCTCTCCTTAGTGGCGACATGGCCCACGCCGGCCGCCTCCTGGCCG
ACACCACGGAGGCAGCAGCGCCCGCTGCAACGCCTGCCGCTGTCCCAGGCATCCCCGCGCCGAAGCCGCCCGTGCCCACC
ATGCCTACAATGCCACCAGTGCCAACCGTGCCCGCGGTCACCACACCGCAGGTCACAGTGCCCCCGATGCCAGCCGTGCC
CGCGCTCGCCGTTCCCCAGTTCACGGTACCCCCCATGACGGCCGTGCCCGCGATCACCGTGTCCC---------------
---------------------------------AGGTCACGTTGCCGCCCATGCCGGCCGTCCCTGCGGTCACCGTGCCC
AAGGTCACGTTGCCGCCCATGCCCGCAGTTGTTGTGCCGAAGGTGACGATGCCGCCAATGCCTGCAATTCCATCCATCTC
CATACCCAAGGTGGCATTGCCTCCGATGCCTTCCATTCCCACTGTGAACGTGCCGATGCCAACCCTTGCGCCACCTCCTT
CAGCATAGGCACGAACCAGAGCACCGGGAGCGAGAATCTACAATGCTGGCTCAATGATTTTGGCAATGTTTACTTGATCA
TTTGATTTTGGCCATTTACCGTTCGCCGGCTTGTTTACATTGTGCGGTTCCTATTTTGTTTTTGTTTTTGTTTTTGTGTT
TGTGTTTGTGTA----GTAGTAC--TATTGGGCTTGTCAATGGCCATCTCTTTTTCTTTCTCTTTGTACTGAGTTTTTAC
AACGAACATGTATGTCATTTTTATCACATTTATGTCAGACATACTGTTATGTACTTATTGAGCATTAGCCCGCCATGTGG
GGTCTAACTCCAACAAATCTGCCTTCTGATGAATATGCATTTGAGCCTGAT-----------------------------
----------------------------------------G---------------------------------------
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------------------AATATGCATTTGAGCCTTGAAAAGTTGAACACAAGTAGGAGTAC------------------
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-------------------------------------------GTGCACAACTAGACTTGGAACATCTTTGACA------
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--------------------TACATTTATACATTCAAATCGTCCAAACGAAGAGCATTACAGCGAATGCACGCTTCCATC
TTCATTTTGAGTGGAACGCCCAGAAAGATACATTTCTGCGGTGGCAGTATGCAATGCAGCTCCAATTGGAAGGACATCCT
CATCGACGAAGAAATGCGGGTTGTGAGCAGAGTGGACCGAACCGACATTTTCATTTCTAATACCGATACCAAACATAACA
CCAGGAACTAACTGTTGGTAGAATGCAAAGTCTTCCCCTGCCATGATCTTCTCTCCGGGCTTCACCTTGTCTGGCCCAAG
CAAACTTCTGCCCACATTCTCTACAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S---S-S---------
------SS----SSS-S-------------------S---------S---S---------------------------SS
SSS----------------S--S-------S--------------------------------------S-------SS-
--------------------------S-------------------------------------------S--S------
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----------------S-SS------S------------------------------S----------------------
--------------------------S-------------S-------------S-------------------------
--SSS-------------------------------------------------------------------------S-
--------------------------------------------S-S---------------------------------
-----------------------------S---------S----------------------------------------
--------------------------S---------------------------------------------S-------
----------------S---S----------------------------------------------------S------
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-----------------------------------------S-------S-------------S----------------
-----------------------S----------------------S---------------------------------
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----------------------------------------------S------------------------S--------
----------------------------------S-----------S-SS---SS--S-SSS-SSS--SSS-SSS-S--S
S-SSS--SSSSSS--SSSSSSSSSSS-SSSSSSSS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
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------------------------------------------------------------------S-------------
-------S--------S---------------------------------------------------------------
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>forward_497
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-----------------------------------------------------------------------------CCT
GTATGTGCTGCCAGTCA---------------------------------------------------------------
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>reverse_2222
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-------------------------------------------------------------CAATCTTGCTGCAACCCAC
C-------------------------------------------------------------------------------
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