>input_sequence_75314
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-----------------------------------------------------ATGGCCGCGCAGGAGGGCGCCGCGGGG
ACGGCGAACCAGGTGGCGAGGGTGCGGTACGGCGACGTCGACGACAGCAACTTCGCGCTGCGCGGCCGCGCCGTGCCGCT
GCTGGCCGGCCTGCTCGCCCTCCTCGTCGCCTTCGTCGCCGTCTGCCTCTACCTCCGCTGGGCGTGCGGCCGCCGCCGCG
CCCGCCGCGACGCCGACCGCGAGGCCTCGTCCTCGTCCGCCGCGGCCTCGCCCGTGCCCGGCCTCGACGCCGACGCCATC
AATGGGCTGCCCGTCACGCTCTACAGCCCGCCCGCCTCCTCGCCGGCGCGCTCCCCTTCTCGGCAGAAGGGCGACGGTGG
AGACGAGGAGCAGGCGGC------GGCGGCTGTGGAGTGCTCGATCTGCATCAGCGCGCTGGTGCCCGGGGACAAGGTGA
AGGCGCTCCCTCCCTGCGGCCACTGCTTCCACCCGGAGTGCGTCGACGCCTGGCTCCGCTCCCAGCCCAGCTGCCCGCTC
TGCCGCACCCTCCTCCTCCCCGCCGCCGCCGTCGCCAAACGTGTCGACGTTGTCAACGGAGGCCACCCGCCGGTGTGA--
--------------------------------------------------------------------------------
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-------
>chr1D_1_TraesCS1D01G296400
CACACGGGAATGGCAGGTTTAGTTGATAAGTATGGCAATTCCCACCTCAGTTTTGATATTCATCGGCTGGATTGAGCAAC
GCCAACCCTCATGTGCCATCACTCTTGTTCAAAGGTAGATCAATGTGAGAGTGGAGAAACCCTAGCTAGGAGCGCGTCGA
AGACCGCC-GCAACCACGAAGAGAGAGGGAGAGGAGCATGGATAGGC-GGCAGAGAAAAGGTTGTGGATTTGTAGATTCT
CTCGAGTCACCTGAGCGGGGGCAGCTCGCCGACGAACCCTCGAAGCAGATGGCCACC--------AGCCGGCAGGAGCAG
GACGGCCAATTTCACCCTTGGCGATG----TAATTGTCACAAGCTCCAGCCACAAATTCGCCAAAAAAAAAAAGAAATAA
TTGCCAGTCAAAGATCCCCGTAGAAAATATTCGCCGCTGAAAAATCGCAAGCACTGTGCAGTTCAAAACCATTGGTCTGA
ATGCATGCGCGGAGCTCCGTT--------------AGTCGTCGATCCCATCCCCCGTGGATCGTGACCAGCGATCGGAAC
CGGAGAATAT--------------------------------CGCGCTCCCGAGTC-------CACGGCGGCAGCACAGT
GCGGCATGCCTCCGTGCCGGCCCG----------------------------------ATCAG-------CTCGCGGCTA
GCTTCCG--TTCCACCTGTGCCCCACCGGCAGGAGCCATTTTTCCAAGCTTAAAAGGGACGGCCGAGGACTTTGAATTTT
TA-AAACCACGCTC----CACATCTCGCAGCTCACTCGCTCTCCGGTCGATCGCTCTCTCGCCAGGCCGAGCCACACCGC
CACTTGCTCCGATATTTCCTC------------GC----CC--------GCTCCTCCGGTCGATCGCCTGCACCACAAGC
----CGGCC----GGCAGCGCGCTCGGTCTCCCATGCGCCGCCTTTGACTACCGCAGCTCCACGAGTCCGCACCCCGCAC
ATGGCGTGAGAGCGTGGT----------C-TAGCTGATAAGTCCAAGAAGTCCAAGCTCGTGCACGTCGAGGCTT-----
---GCGT----GCGTGCGGAGTTCGCGGAGGGAGAGGAAGGAAGCGACCG---ATGGCCGCGCAGGAGGGCGCCGCGGGG
ACGGCGAACCAGGTGGCGAGGGTGCGGTACGGCGACGTCGACGACAGCAACTTCGCGCTGCGCGGCCGCGCCGTGCCGCT
GCTGGCCGGCCTGCTCGCCCTCCTCGTCGCCTTCGTCGCCGTCTGCCTCTACCTCCGCTGGGCGTGCGGCCGCCGCCGCG
CCCGCCGCGACGCCGACCGCGAGGCCTCGTCCTCGTCCGCCGCGGCCTCGCCCGTGCCCGGCCTCGACGCCGACGCCATC
AATGGGCTGCCCGTCACGCTCTACAGCCCGCCCGCCTCCTCGCCGGCGCGCTCCCCTTCTCGGCAGAAGGGCGACGGTGG
AGACGAGGAGCAGGCGGC------GGCGGCTGTGGAGTGCTCGATCTGCATCAGCGCGCTGGTGCCCGGGGACAAGGTGA
AGGCGCTCCCTCCCTGCGGCCACTGCTTCCACCCGGAGTGCGTCGACGCCTGGCTCCGCTCCCAGCCCAGCTGCCCGCTC
TGCCGCACCCTCCTCCTCCCCGCCGCCGCCGTCGCCAAACGTGTCGACGTTGTCAACGGAGGCCAC---CCGCCGGTGTG
ACTCGTGAGCCAGAAGTCAACGTGCTCGCGCGCCAA--------CTCATCGAAGCATGACAAGCAGGCCCCACCTGTAAG
CCACTTACTGCTATCTTGACGGCAAGAAAGCCTGTCCCGGTTTAACGACAGAACCAAATGACCAATGTGGCTAGCTAACT
GGCCCCGGCGAGGTGCGCCATCGCCGGAGGTTCGCTGGAACCAGCACAAAAATTTGCTACCACCGGCGCTTTTGATTTTG
CTG-AAACCGACGCCAATTTAGCAAAACTGTTTCGCAATTTGCTACCATTGGCGTTTTGCTTTGATGGAACTCGATCCAT
TTTTT-TGTTACAACCGGGCATTTCGC--TTTTGCTAGAACAAATGTTCAA----TTTTTTGTATTTTTGTTTCCAATGG
CGTTTTGGGTTGCTGGAACCACTTCAATTTTTTTCTACCACCGGTG-TGTCGGTTTGTTGGAACATTGCCCGATTTTTGC
ATTTTTGCTT-TT-ATCGTTTTTTATTTTTGCTGGGACCAGCCTCAAAATTTTGCTACCACCATATTCCTTTTTTTGCTG
GAACCGACAA-TTTTTGTGCTTCAACCGAGTACTGGAGTTTTATGTTGCTTTGGTT-TTTTTGCTGGATGTGGCCTTTTC
GTTTGCTACAACCGGCTATAC-GGATGCTGGAACCT------TT---GGGAAGCTGCAATGCCGCGTGACCACTGGTGAA
GGAGCTGCCAC----------GGTGTTGCAACCAATGGTGGCGGAGCCGCAATCCGTCGCTGGCAG-TTTTCTCAGGAAT
TTATCGAGCTGCAGCCTGTCCACA--GTGGTTTTGCGACAGCTTCGTCGAAGA-TTT-TGCGTGGGCCATGGCCACCACG
GCACCGGTGGGACTCATGGGAGGGAAGGGGAGAGGAAAGCTGTGACGATGGCCATAGTGATTCACAGTGCACATGCATAA
CCCACATATCTTCACAGTACGTGTTAATTTCGACACAAAAAATGCTACTGATCATTACGGTGTTGTAGACGGCAGGCCCA
ATCCTTG
>chr1A_111
--------------------------------------------------------------------------------
------------------------------AAAGGAAGATCAATGTGAGAGTGGAGAAACC----CTAGGAGCGCGTCGA
G-----------ACCACGAA--------GAGAGGAGCATGGATAAGC-GGCAAAGGAAAGGTTGTAGTCTTGTAGATTCT
CGCGAGTCACCTGGGCGGGGGCAGCTCGCCGACGAACCCTCGAAGCAGATGGCCACTAGCCGTCTAGCCGGCAGGAGTAC
GACGGCCAATT-CACCCTTGGCGATG----TAACTGTCACAAGTTCCAGCCACAAATCCGCC---AAGAAAAATAAACTA
TCGCCAGTCAAAGATCCCCGTAG--------------------------------GTGCAGTGCAAAACCATTGGTCTGA
ATGCATGCGCGCAGCTCGCTTGC--------TACAAGTCGT-----CCATCCCCTGTGGATCGTGACCAGCGATCCGAAC
CGGAGAATATTACACCTCCCTGCAAATTAAGAAGAAGAATATCGCATCGCCGAGTC-------CACGGCGACAGCACAGT
GCGGCATGCCGCCGTGCGTGCCGGCTCGATCCAGTCACGCCCAAGTTGGCAGTTGCCCATCAGCTCGGGCCTCGCGGCTA
GCTTCCG--TTCCGCCTGTGCCCCACCGGCCGGAGCCATTTTTCCAAGCTTAAAAGGGACGGCCGAGGACTTTGAATTTT
AA-AA-CCACGCTC----CCCGTCCAGCAGCTCGCTCACTCTCCGGTCGATCGCTCTCTCGCCAGGCCGAGCCACACCGC
CACTTGCCACGATATTTCCTC------------GCTCGCCC--------GCTCCTTCCACCGATCGCCTGCACCACAAGC
----CGGCCGGCCGGCAGCGCGCTCGGTCTCCCATGCGCTGCCTTTGACCACCAGAGCTCCACAAGTCCGCACCCCGCAC
ATGGCGTGAGAGGGTGGGCTAGCTGCTAC-TAGCTGATAAGTCCAAGAAGTCCAAGCTCGTGCACGTCGAGGCTTGCGTG
CGTGCGT----GCCTGCAGAGTTCGCGGGGAGAAGAAGGAGAGA--ACCG---ATGGCCGCGCAGGAGGGCGCCGCGGGG
ACGACGAACCAGGTGGAGAGGGTGCGGTACGGCGACGTCGACGACAGCAACTTCGCGCTGCGCGGCCGCGCGGTGCCGCT
GCTGGCCGGCCTGCTCGCCCTCCTCGTCGCCTTCGTCGCCGTCTGCCTCTACCTCCGCTGGGCGTGCGGCCGCCGCCGCG
CCCGCCGCGACGCCGACCGCGATGCCTCGTCCTCGTCCGCCGCGGCGTCGCCCGTGCCCGGCCTCGACGCCGACGCCATC
AATGGGCTGCTCGTCACGCTCTACAGCCCGCCCGCCTCCTCGCCGGCGCGCTCCCCTTCTCGGCACAAGGGCGACGGTGG
AGACGAGGAGGAGCAGGC------GGCGGCTGTGGAGTGCTCGATCTGCATCAGCGCGCTGGTGGCCGGGGACAAGGTGA
AGGCGCTCCCTCCCTGCGGCCACTGCTTCCACCCGGAGTGCGTCGACGCCTGGCTCCGCTCCCAGCCCAGCTGCCCGCTC
TGCCGCACGCTCCTCCTCCCCGCCGCCGCCGTCACCAAGCCGGTCGACGTTGTCAACGGAGGCGACCCGCCGCCGGTGTG
ACTCGTGAGCCAGAAGACAACGTGCTCGCACGCCAA--------CTCACCGAAGCATGACAAGGAGGCCCCACCTGTAAG
CCACTTACTGCTATCTTCACCGCAAGAAAGCCCGTCCTGGTTTAACAACAGAGCCAAATGACCAATGTGGCTAGCTAACT
GGCCCCGGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------
>chr1D_117
--------------------------------------------------------------------------------
------------------------------------AGATCAATGTGAGAGCGGAGAAACC----CTAGGAGCACGTCGA
AGACCGCGGGCAACCACGAAGAGAG--------GAGCCTGGATAAGCGGGCAGAGAAAAGGTTGCAGTCTTGTAGATTCT
CTCGAGTCACCTGGGCGGGGGCAGCTCGCCCACGAACCCTCGAAACAGATGGCCACC--------AGCCGGCAGGAGTAG
GACGGCCCATT-CACCCTTGGCAATGTACGTAATTGGCACAAATTCCAGCCATAAAATCGCCAAAAAAAGAGAGAAATAA
TTGCCAGTCAAAGATCCCCGTAGAAAACATTCGCCGCTGAAAAATCGCAAGCACTGTGCAGTGCAAAACCATTGGTCTGA
ATGCATGCGCGCAGCTCGCTCGCTCGCTACATACAAGTCGTCCATCCCATCCCCCGTGGATCGTGACCAGCGATCGGAAC
CCGAGAATAT--------------------------------CGCACCCCCGAGTCCACAGTCCACGGCGACAGAACAGT
GCGGCATGCCGCCGTACGTGCCGGCTCGATCCAGTCACGCCCAAGTTGGCAGTTGCCCATCAG-------CTCGCGGCTA
GCTTCCGAGTTCCGCCTCTGCCCCACCGGCCGGAGCCATTTTTCCGAGCTTAAAAGGGACGGCCGAGGACTTTGAATTTT
AA-AAACCACGCTC----CCCATCCAGCAGCTCACTCACTCTCCGGTCGATCGCTCTCTCGCCAGGCCGAGCCACACCGC
CACTTGCCCCGATATTTCCTC------------GCTTGCTTGCTCGTTGGCTCCTTCCACCGATCGCCTGCGCCACAAGC
----CGGCC----GGCAGCGCGCTCGGTCTCCCATGCGCTGCCTTTGACCACCGCAGCTCCACGAGTCCGCACCCCGCAC
ATGGCGTGAGAGCGTGGGCTAGCT-----------GATAAGTCCAAGAAGTCCAAGCTCGTGCACGTCGAGGCTT-----
---GCGT----GCGTGCAGAGTTCGTGAAGGGAAGGGAAGGAAGAAACCTACTATGGCCGCGCAGGAGGGCGCCGCGGGG
ACGGCGAACCAGGTGTCGAGGGTGCGGTACGGCGACGTCGACGACAGCAACTTCGCGCTGCGCGGCCGCGCCGTGCCGCT
GCTGGCCGGCCTGCTCGCGCTCCTCGTCGCCTTCGTCGCCGTCTGCCTCTACCTCCGCTGGGCGTGCGGCCGGCGCCGCG
CCCGCCGCGATGCCGGCCGCGAGGCCTCGTCCTCGTCCGCCGCGGCGTCGCCCGTGCCCGGCCTCGACGCCGACGCCATC
AATGGGCTGCCCGTCACGCTCTACAGCCCGCCCGCCTCCTCGCCGGCGCGCTCCCCAACTCGGCAGAAGGGCGGCGGTGG
AGACGAGGAGCAGGCGGCGGCGGCGGCGGCCGTGGAGTGCTCGATCTGCATCAGCGCGCTGGTGGCCGGGGACAAGGTGA
AGGCGCTCCCTCCCTGCGGCCACTGCTTCCACCCGGAGTGCGTCGACGCCTGGCTCCGCTCCCAGCCCAGCTGCCCGCTC
TGCCGCACCCTCCTCCTCCCCGCCCCCGCCGTCGCCAAACCTGTCGACGTTGTCAACGGAGGCCACCCGCCGCCGGTGTG
ACTCGTCAGCCAGAAGACAACGTGCTCGCACGCCAA--------CTCATCGAAGCATGACAAGCAGGCCCCACCTGTAAG
CCACTTATTGCTAT------------AAAGCCCGTCCCGGTTTAGCAACAGAGGCAAATGGCCAATGTGGCTAGGTAACT
GGCCCCGGCGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr4B_146
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTAGGAGCACGTCCA
AGACCGCCGGCAACCACGAAGAGAGACGGAGAGGGGCATGGATAAGC-GGCCGAGAAGAGGTTGTAATCTTGTAGATTCT
CCCGAGTCACCTGGGCGGGGGCAACTCGCCGACGAACCCTCGAAGCAGATGGCCACC--------AGCCCGCAGGAGTAG
GACGGCCAATT-CACCATCGGCAAT----GTAATTGTCACAACTTCCAGCCACAAATTCGCCAAAAAAG----GAAATAA
TTGCCAGTCAAAGATCCCCGTAGAAAATATTCGCCGCTGAAAAATCGCAAGCACTGTGCAGTTCAAAACCATTGGTCTGA
ATGCATGCGCGCAGCTCGCCTGC--------CACAAGTCGTCCATCCCTTCCCCCGTGGATCGTGACCAGCGATCCGAAC
GGGAGAATATTACACCTCCCGGCAAATTAAGAAGAAGAATATTGCACCCCCGAGTC-------CACGGCGACAGCACAGT
GCGGCATGCCGCCGTGCGTGCCGGCTCGATCCAGTCACGCCCAAGTTGGCAGTTGCCCATCAGCTCGCGCCTCGCGGCTA
GCTTCCGG-------CTGTGCCCCACCGGCCGGAGCCATTTTTCCAAGCTTAAAAGGGACGGCCGAGGACTTTGAAATTT
TAGAAACCACGCTCGTCCCCCATCCAGCAGCTCACTCGCTCTCCGGTCGATCGCTCTCTCGCCAGGCCGAGCCACACCGC
CACTTGCCACGATATTTCCTCGCTCGCTTGCTTGCTCGCCC--------GCTCCTTCGACCGATCGCCTGCACCACAAGC
TGGCCGGCC----GGCAGCGCGCTCGGTCTCCCATGCGCTGCCTTTGACTACCGCAGCTCCACGAGTCCGCACCCCGCAC
ATGGCGTGAGAGCGTGGGCTAGCTGCTGCGTAGCTGATTAGTCCAAGAAGTCCAAGCTCGTGCACGTTGAAGCTT-----
---GCGTGCGTGCGTGCAGAGTTCGTGAAGGGAGAGGAAGGAAGAAACCTACTATGGCCGCGCAGGAGGGCGCCGCGGGG
ACGGCGAACCAGGTGGCGAGGGTGCGGTACGGCGACGTCGACGACAGCAACTTCATGCTGCGCGGCCGCGCCGTGCCGCT
GCTGGCCGGCCTGCTCGCGCTCCTCGTCGCCTTCGTCGCCGTCTGCCTCTACCTGCGCTGGGCGTGCGGCCGCCGCCGCG
CCCGCCGCGACGCCGACCGCGAGGCCTCGTCCTCGTCCGCCGCGGCGTCGCCCGTGCCCGGCCTCGACGCCGACGCCATC
AATGGGCTGCCCGTCACGCTCTACAGCCCGCCCGCCTCCTCGCCGGTGCGCTCCCCTTCTCGGCAGAAGGGCGACGGCGG
AGACGAGGAGCAGGCGGC---------------GGAGTGCTCGATCTGCATCAGCGCGCTGGTGGCCGGGGACAAAGTGA
AGGCGCTCCCTCCCTGCGGCCACTGCTTCCACCCGGAGTGCGTCGACGCCTGGCTCCGCTCCCAGCCCAGCTGCCCGCTC
TGCCGCACCCTCCTCCTCCCCGCCGCCGCCGTCGCCAAGCCGGTCGACGTTGTCAACGGAGGCGACCCGCCGCCGGTGTG
ACTCGTGAGCCAGAAGACAACGTGCTCGCACGCCAAGTCGCCAACTCACCGAAGCATGACAAGCAGGCCCCACCTGTAAG
CCACTTACTGCTACCTTGACCGCAAGAAAGCCCGTCCCGGTTTAACAACAGAGCCAAATGAGCAATGTGGCTACCGTACC
TGTCCCCGCGAGACGCGTCATCGCCGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------
>chr1D_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------AGGTTTGCTGGAACCAGCACAAAATTTTGCTACCACCGCCGTTTTCGATTTTG
CTG-AAACCAATGCCAACTTTT------------GCAATTTGCTACCACCGGCATTTTGGTTTGCTGGAACTAGAT-CAA
TTTTT-TGCTACAACCGAACATTTTTGCATTTTGCAGAACCAAACGTCCAAC-----TTTTGCATATTTGTTTCCAATGG
CGTTTTGGTTTGCTGGAACCACTTCAATGTTT-GCTATCTCTGGTTTTTTCGGCTTGTTGGAACATCGCCCAATTTTTGC
ATTTTTTGCT-TC-ATCCTTTTTTATTTTTGCTGGAACCAGCCTCAAAA-TTTGCTACCACCGTATTTCAATTTT-GCTG
GAACCGGCATTTTTTTCTGCTTCAACCGAGTGCTGGATTTTT-TGTTGCTTTGA-T-TTTTTGCTGGATGTAGCCTTTTT
GTTTGCTACAACCGGCTTTGCGGGATGCTGGAACCTCTTGTTTTTGGGCGAAGCTGCAATGTCGTGTGACCACTGACGAA
GGAGTTGTCAACGC-TTTTTTGGTGTTGCAACCATGGGTGGCAGAGCCGCAATTCGTCTCTGGCAG-TTTTCTCAGGAAT
TTATCGAGCTGCAACCTGCCCACA--ATGGAGTTGCAACAGCTTCGTCGAAGA-TTT-AGCGTGGGACATGGCTACCACG
GCATCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr2B_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------AGGTTTGTTGGAACCAGCACACAATTTTGCTACCATCGTCGTTTTTGACTTTG
CAG-AACCG-GCGCCAAATTTT------------GCAATTTTCTACCACCAGCGTTTTTGTTTGCTGGAACTAGAT-CCA
TTTTT-TGCTACAACCGGGAATT----------GCTGGAACAAACGTCCAA----TTTTTTGCATTTTTGTTTCCAATGT
CATTTTGGTTTGCTAGAACCACTTCGATTTTTTGCTACCACCGGTG-TTTCGGTTTGTTGGAACATTGCCCGATTTTTGC
ACTTTTGCTTCCATCGT-TTTCTGATTTTTGCTAGAAGCAGCCTCAAAA-TTTGCTACCACCATATTCCTTTTTT-CCTA
GAACCGGCAA-TTTTTCTGCTTCAACCGAGTACTGGAGTTTTATGTTGCTTTGGTT-T--TTGCTGGATGTGGCCTTTTC
TTTTGCTGCAATTGGCTATGCGG-ATGCTGGAACCT------TT--GGTGAAGCTGCAATGCCGCCTGACTACTGGTGAA
GGAGCTATCAGCATG--CTTTGGTGTAGCAACCATGGATGGCGGAGCCGCAATCCGCCGCTCGCAGTTTTTCGCAAGAAT
TTAGTGAGCTGCAACCCACCCACA--ATGGAGCTGCGACAGCTTCGTGGAAGA-GTT-TGCATAGGCCATGGCCACCATG
GCACTGGTGGA---------AGGGAAGGGGAGAGGAAAGTTGTGAC----------------------------------
--------------------------------------------------------------------------------
-------
>chr1B_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGATTTGCTGGAACCAGCACAAAAATTTGCTACCATCGGCGTTTTT-ATTTTA
CTGAAACGG-ACGACAGTTTCT------------GCAATTTGCTACCACCAGCGTTTTGGTTTGCTGGAACCAGAT-CCA
TTTTT-TGCTACAACAGGACATTTTGC--TTTTGCTGGAACAAGCGTCTAATATTTTTTTTGCATTTTTGTTTCCAATGG
CATTTTGTTTTGCTGGAACCGCTTCAATTTTT-GCTACTATCGGTGTTTC--GTTTGTTGGAACATTGCCTAATTTTTTC
TATTTTTGCT-TCCATCGTTTTTATTTTTTGCTGGAACCAGCCTCAAAA-TTTGCTACCACCATATTCAGATTTT-GCTG
GAACCGGTAA-TTTTTCTGCTTCAACCCAGTACTGGAGTCTTTTGTTGCTTTTTATGTTTTTGCTAGATGTGGCCTTTTC
GTTTGCTACAATCTGCTATGCGGGATGCTGGAAACTCTTGTTTT--GGCGAAGCTGCAATGCCGCGTGAAAACTGATGAA
GGAGCTGCCAGCGCG--TTTTGGTGTCGCAACCATGGGTGGCGGAGA-GCAATCCGTCGCCGGCAG-TTTTCTCATGAAT
TTATCGAGCTGCAACCCGCCCGCA--ATGGAGTTGCGACATCTTCGTCGGAGATTTT-TGCATGGGCCATGGCCACAACT
GCATCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr1B_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------AGGTTTGCTAGAACCAACACAAAATTTTGCTACCACCGCCAATTTCGATTTTG
CTG-AAACCAACGCCAACTTTT------------GCAATTTGCTACCACCAGCATTTTGGTTTGCGGGAACCAGAT-CAA
TTTCT-TGCTACAACCGAACATTTTTGCATTTTGCAGAACAAAACGTCCAAC-----TTCTGCATATTTGTTTCCAATGG
CGTTTTGGTTTGCTGGAACCACTTCAATTTTT-GCTACCTCTGGTGTTTTGGGCTTGTTGGACCATCGCCCAATTTTTAC
ATTTTTTGCC-T-CATCCTTTTTTATTTTTGCTGGAACCAGCCTCAAAA-TTTGCTACCACCATATTCCAATTTT-GCTG
GGACCGGCATTTTTTTCTGCTTCAATCGAGTACTGGATTTTT-TGTTGCTTTGA-T-TTTTTGCTGGATGTAGCCTTTTT
GTTTGTTACACCCGGCTTTGCAGGATGCTGGAACCTCTTGTTTTTGGGGGAAGCTACAATGCCGCGTGGCCACTGATGAA
GGAGTTGTCAATGCTTTTTTTGGTGTTGCAACCATGGGTGGCGGAGCCGCAATCCGTCCCTGGCAG-TTTTCTCAGGAAT
TTATCGAGCTGCAACCTGCCCATAATATGGAGTTGCGACAGCTTCGTCGAAGA-TTT-AGCATGGGACATGGCTACCACG
GCACCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chrUn_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGGTTTGTTGGAACCAGCACAAAATTTTGCTACCACCGCCGTTTTCGATTTTG
CTG-AAACCAATGCCAACTTTT------------GCAATTTGCTACCACCGGCATTTTGGTTTGCTGGAACCAGAT-CAA
TTTTT-TGCTACAACCGAACATTTTTGCATTTTGCAGAACAAAACGTCCAAC-----TTTTGCATATTTGTTTCCAATGG
CGTTTTGGTTTGCTGGAACCACTTCAATTTTT-GCTACCTCTG-TTTTTTCGGCTTGTTGGAACATCTCCCAATTTTTGC
ATTTTTTGCT-T-CATCCTTTTTTATTTTTGCTGGAACCAGCCTCAAAA-TTTGCTACCACCGTATTCCAATTTT-GCTG
GAACCGGTATTTTTTTCTGCTTCAACCGAGTACTGGATTTTT-TGTTGCTTTGA-T-TTTTTGCTGGATGTAGCCTTTTT
CATTGCTACAACCGGCTTTGCGGGATGCTGGAA-------------------------ATGTCGTGTGACCACTGGTGAA
GGAGTTGTCAACGC-TTTTTTGGTGTTGCAACCATGGGTGGCAGAGCCGCAATCCATCTCTGGCAG-TTTTCTCAGGAAT
TTATCGAGCTGCAACCTGCCCACA--ATGGAGTTGCGACAGCTTCGTCGAAGA-TTT-AGCGTGGGACATGGCTACCACG
GCACCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chrUn_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGGTTTGCTAGAACCAACACAAAATTTTGCTACCACCGCCAATTTCGATTTTG
CTG-AAACCAACGCCAACTTTT------------GCAATTTGCTACCACCAGCATTTTGGTTTGCGGGAACCAGAT-CAA
TTTCT-TGCTACAACCGAACATTTTTGCATTTTGCAGAACAAAACGTCCAAC-----TTCTGCATATTTGTTTCCAATGG
CGTTTTGGTTTGCTGGAACCACTTCAATTTTT-GCTACCTCTGGTGTTTTGGGCTTGTTGGACCATCGCCCAATTTTTAC
ATTTTTTGCC-T-CATCCTTTTTTATTTTTGCTGGAACCAGCCTCAAAA-TTTGCTACCACCATATTCCAATTTT-GCTG
GGACCGGCATTTTTTTCTGCTTCAATCGAGTACTGGATTTTT-TGTTGCTTTGA-T-TTTTTGCTGGATGTAGCCTTTTT
GTTTGTTACACCCGGCTTTGCAGGATGCTGGAACCTCTTGTTTTTGGGGGAAGCTACAATGCCGCGTGGCCACTGATGAA
GGAGTTGTCAATGCTTTTTTTGGTGTTGCAACCATGGGTGGCGGAGCCGCAATCCGTCCCTGGCAG-TTTTCTCAGGAAT
TTATCGAGCTGCAACCTGCCCATAATATGGAGTTGCGACAGCTTCGTCGAAGA-TTT-AGCATGGGACATGGCTACCACG
GCACCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>chr6B_1764
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GCTGGAACCAGCACAAAAATTTGCTACCATCGGCGTTTTTGATTTTA
CTG-GAACGAACGGCAATTTTT------------GCAATTTGCTACCACCAGCGTTTTGGTTTGCTGGAACCAGAT-CCA
TTTTTTTGCTACAACAGAACATTTTGC--TTTTGCTGGAACAAACGTCA---ATTTTTTTTGCATTTTTGTTTCCAATGG
CATTTTGTTTTGCTGGAACCGCTACAAA-TTTTGCTACTACCGGTG-TTTCGGTTTGTTGGAACATTGCCTAATTTTTTC
TATTTTTGCTTT-CATCGTTTTTATTTTTTGCTGGAACCAGCCTCAAAA-TTTGTTACCACCATATTCAGATTTT-GCTG
GAACCGGTAA-TTTTTCTGATTCAACCGGGTACTGGAGTTTTC-------------------------TGTTGCCTTTTC
GTTTGCTACAATCTGCTATGCGGGATGCTGGAACCTCTTGTTTT--GGCGAAGCTGCAATGCCGCGTGAAAACTGATGAA
GTAGCTGCCAGTGCG--TTTTGGTGTCGCAACCATGGGTGGCGGAGATGCAATCCGTCGCTGGCAG-TTTTCTCATGAAT
TTATCGAGCTGCAACCCGCCCACA--ATGGAGTTGTGACAGCTTCGTCGGAGA-TTTTTGCGTGGGCCATGGCCACCATT
GCATCGGTGGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------------SSSS---------------
--------------------------S-----------------S--------------------S-SS-----------
-------------S---------------------------------------------------------------S--
-----------S-------------------------------S------------------------------------
--------------------------------------------------------------------------------
-----------S-----SS-----------------------S-------------------------------------
---------------------------------------------S-S----------------------S---------
----------S------SS---S---------------------------------------------------------
-------------S----------------S-------------------------------------------------
-------------------S----SS------------------------------------------------------
-------S-----------------------------------------------S--SS--------------------
---------------------------------------S----------------------------------------
-----------------S--------------------------------------------------------------
-----------------S--------------------------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------S------------S--------------------------------------------------
--------------------S-----------S-------------S-----S---------------------------
------------SS---S--------------S-----------------------------------S-----------
---------S----------SSSSSSSSSSSSSS--------------SS---------S----S-------S---S--S
--------S---------------S-----------S-------S--S--------------S-----------------
--------S------------------------S--------------S-------------------------------
------------S----------------------S-------------S-------------------------S----
------S---------S---------------------------------------------------------------
-------------------S------------------------------------------------------------
----------S-----------------------SS--------------------------------------------
-------------S----S-------S---SS------------------------------------------------
------------SSSSSSSS-------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_226
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCGGCAGAGAAAAGGTTGTG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------
>reverse_2420
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------ACGGATGCTGGAACCTTTGG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
