>input_sequence_75294
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----------------------------------------ATGATGCTTGATCCAGATGATGCGACCATGTACTCAAACA
GGAGCCTTTGCTCGCTCCGCATGGGTGACGGAGACAAGGCTTTGGTAGATGCTAACGAATGCAGAAAAATGCGGCCTGAT
TGGCCAACAGCCTGTTACCGGCAGGGCGCGGCTCTGATGTTACTGAAGGTTACATAGAAGATACCATCTAAAAAAAAGAT
ACTGCCGGATGTTTTTTCCTCTATATGAGTTTGTGTGCGAATTGTTTTTGGCTATTAACTTGTGTTTTATCATCAGGATT
ACAAGGGTGCTTGTGAAAGTTGCCTGGATGGACTCAAGTTGGACCGAGCTAACACTGAGATTGAGGATGCATTACGGTAT
CCCATCTGCCTCCTTTTTGTTGTTTGTGGCAAACACATCATTGGTTGCATTATGCATTGTGAGGAACCAGACATACTTAT
ATTAGTAGTTATTAAGTTCTTGTTGTGCTTTTGCTCCTAAGTGTTACTACAAGTGAGTGAAGCA-GTCTCTGATGGTCCT
CTTTTGAATATGCAGGAAAGCTTATGATGCCATGCAAGATGTCTCGAAGCACCAAGGCTGA-------------------
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>chr1B_1_TraesCS1B01G289000
CCCCTATACTCAAATCCTGGCTCCGCCCCTGAGCTCCGAGCCGAGAACGGCGCCTGAGCACCACGCCCACACGCCGCCCT
GGATCGGGCCGCGACAACACGTCGACGCGCCCTTGACCTACCACGCCCACCAGCACACACACAGCCATAATCGCCCGCGC
ACGCCACGCCGACAGACGCTAGCTCGCCGCGCCGCCCCACACCTCCCTTGGCCTAGCGGCCCCGTGCCACCCCAGCCTCG
CGAAAGGGAAGTAATGAAGCGTCCCGCCGCCGCGCAGGCTCTACCCGGCGGCGAGGGTGGGAGGGTTGGAGAGGGGGTGG
TTGGCTCAGCGGGCAAGGCTTCTAATTTCATAGATTATGATATGGTTTTACATTATTCTTTAATGCGAATACATTGATCT
AAAATATTCTTTTGGTCAAAACTTGTTCAAATACCAAAAAATTCACATCGAGTTGGGGGGCTTCCCGCAAAAAAAAAAGA
ACGGGGCAACAAAGGTTCCTACCGACGATGCCACAGGTCTGCAGCCTATTATTGCGGGAGCTGGTTTTGTTACAAATCAT
GGGAGAATTAAGACATCGTTGAGCTTCCAGCTTGTCATAAACATGAAGAGGGTAGATTAGTAGTGTGTTAACCTGCTGAT
GGTGCATTTCTTTGAGAATAAATTAAGTATGACTGTAATATTTTAGGAGTTACTGGCTTCTAGATTTGGTTAAAGCATAG
TGGATAATGAATGAAGTGATAAAAAGCGTCATGATAGCCACTTGTAGGAAGACATAGGGGAAACATAATTTACGCACTGC
CACTTTAATTCTCGCGTGGTATATCCTCAACATTGTGCTATATTTGTTAACTGTATGTCGGATTAATTGGCTTTGTTTTC
CAGCCTTACTCATTCAGGATTAATCGACTATGCCGAGTCTCTTCTCAGTCATGTGGTAGATTTCCTATCTCATTGTCAGT
GCCCACAAATTCCAAATATTTGCCTCGTTGGTTGTAGGCAATGATGCTTGATCCAGATGATGCGACCATGTACTCAAACA
GGAGCCTTTGCTCGCTCCGCATGGGTGACGGAGACAAGGCTTTGGTAGATGCTAACGAATGCAGAAAAATGCGGCCTGAT
TGGCCAACAGCCTGTTACCGGCAGGGCGCGGCTCTGATGTTACTGAAGGTTACATAGAAGATACCATCTAAAAAAAAGAT
ACTGCCGGATGTTTTTTCCTCTATATGAGTTTGTGTGCGAATTGTTTTTGGCTATTAACTTGTGTTTTATCATCAGGATT
ACAAGGGTGCTTGTGAAAGTTGCCTGGATGGACTCAAGTTGGACCGAGCTAACACTGAGATTGAGGATGCATTACGGTAT
CCCATCTGCCTCCTTTTTGTTGTTTGTGGCAAACACATCATTGGTTGCATTATGCATTGTGAGGAACCAGACATACTTAT
ATTAGTAGTTATTAAGTTCTTGTTGTGCTTTTGCTCCTAAGTGTTACTACAAGTGAGTGAAGCA-GTCTCTGATGGTCCT
CTTTTGAATATGCAGGAAAGCTTATGATGCCATGCAAGATGTCTCGAAGCACCAAGGCTGAGTAACTGTTTGCAGGGGGA
AGGAGTTCTTTGTTTTCTTT---AAAAGTGGGAAGACGTTCGGGATCTGCTCTCTAGTCCCTGTAGT--TGAGCGTTTCA
CCTTTTGCTTATAGGCTTTGAATTCCTGAACTCGTCTGATGGGAAATCAAGTAAACTACTGGCATAAACATCTGGGGGGT
TTTATTTGGTTTCCTATCTTTTTGTGTCATTCATTCAGGCTGTCACAAGATAGATTATTATCTGTCCTGGAGCATCTACA
ACCACACTTAGGCAAATCGTCCCCTCATATGCCCTTCAAATCCATATAATCTCATGCAACATAGATCAAACAATGTACTT
TATAATTCTTATAGAGCATAGAATTA------------------------------------------------------
--------------ACGAGCTATGGAGAAAGTTCATCCATTGTCGCCCTTGCACTTGTCCGGTTTATAGATATTGTAACG
CTTGAAGATGATATAGAGACCGAGGCGGATCTGTTTTGCGCCTGGAGGTGTCGAATGCGACACCGTTCTTCTCTTTCTTC
CTCTTTGGGGGGCAGGGCCAGCGAGGGCATGGACAATACGGGTATGCTCCACCGCAAGCGCACGTGCCGCCTGAGCTTAT
CGCTCGCCAGGTTACAAGCACGAATATCCTTC-TGGCCTTGTCCGACGTGGCACGGTGCGACTCACGTTCTGCAACGCGG
CGCACCTTGGCCATCTCACCATGGGCACGTTTGGCTCCAAACTTGAAGCCTAACACCGTGGGGACAAGGGCCCAATGCAG
GGGTTGCT---------------------------CAGACACACACCTCAAGCCATCGGCGGGCGGCGCATCACCGCCGT
TCAATCTAAGCCCCACTGGCGCTAAGGCGCGAACGAAGCCATGTGGTTGAGTATCCTCCTGGGATCGACAGAAAGCTAGC
CAAATCCAAGTTGACGTACTCAGATTCGCTGCCTACAATGTTGAAAATGACCCAAGATCACCAAAAAGGAGCTGGGCAAA
GCGGACTGAAAGTGGGGTGGAGAGGCAAAAATGGCAAGGGTT
>chr1D_326
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-----TCAGCGGGCAAGGCTTCTGATTTC----ATTATGATTTGGTTTTACATTATTCTTTAATACGAATACATTGATCT
AAAATATTCTTTTGGTCAAAACTTATTCAAATACCAAAAATTTCACATCGAGCTGGGGGGCTTCTATC-------AAAGA
ACGGGGCAGCAAAGGTTCCTACCCACGGTGCCACAGGTCTGCAGCCTATTATTGCCGGAGCTGGTTTTGTTACAAATCAT
GGGAGAATTAAGACATC-TTGAGCTTCCAGCTTGTCATAAACATGAAGAGGGTAGATTAGTAGTGTGTTAATCTGATGAT
GATGCATTTGTTTGAGAATAAATTAAGTATAACTGTAATATTTTAGCAGTTACTGGCTTCTGGATCTGGTTAGGGCATAG
TGGATAATGAATGAAGTGATAAAAAGCGTCATGAAAGCCACTTGTAGGAGGACATAGTGGAAACATAATTTATGCATTGC
CACTTTAATTCACGTGTGGTATATCGTCAACATTGTGCTATATTTGTTAACTGTGAGTCGGATTAATTGGCTTTGTTTTC
CAGCCTTACTCATTCAGTATTAATCTACTATGTCGAGTCTCTTTTGAGTCATGTGGTAGTTTTTCTATCTCATTGTCAGT
GCCCACAAATTCCAAATATTTTCCTCGTTGCTTGTAGGCAATGATGCTTGATCCAGATGATGCGACCATGTACTCAAACA
GGAGCCTTTGCTCGCTCCGCATGGGTGACGGAGACAAGGCTTTGATAGATGCTAACGAATGCAGGAAAATGCGGCCTGAT
TGGCCAACAGCCTGTTACCGGCAAGGCGCGGCTCTGATGTTACTGAAGGTTACATAGAAGATACCGTCTAAAAAAAAGAT
ACCGTCAGATGTTTTTTCCTCTATATGAGTTTGTGTGTGAATTGTTTTTGGCTATTAACTTGTGTTTTATCATCAGGATT
ACAAGGGTGCTTGCGAACATTTCCTGGATGGACTCAAGTTGGACCCAGCTAACACTGAGATTGAGGATGCATTACGGTAT
CCCATCTGCCTCTTTTTTGTTGTTTGTGGCAAACCCATCATTGGTTGCATTATGCATTGTGAGGAACCAAACATACTTAT
ATTAGTATTTATTAAGTTCTTGTTGTGCTTTTGCTCCTAAGTGTTACTACAAGTGACTGAAGCAGGTCTCTGATGGTCCT
CTTTTGAATATGCAGGAAAGCTTATGATGCCATGCAAGATGTCTCTCAACACCAAGGCTGAGTAACTGTTTGCAGGGGGA
AGGAGTTCTTTGTTTTCTTTTAAAAAAGTGGGAAGAAGTTCTGGATCTGCTCTCTAGTCGAGCTGTAGCTGAGCGTTTCA
CCTTTTGCTTATAGGCTTTGAATTCCTGAACTTGTCTAATGGGAAATCAAGTAAACTACTGGCATAAACATCTGGGGGGT
TTTATTTGGTTTCCTATCTTTTTGTATCATTCATTCGGGCTGT---AAGATAGATTATTATCTG----------------
-------------------TCCCCTCATATGCCCTTCAAATCCATATAATCTCATGCAATGTAGAGCAAACAATTTACTT
TATAATTCGTATAGAGCATAGCGTGGTCATACAGGAAATAGCATAGGGTAGTTCATCATACATGTCACTTGACTATCAAA
ATTAGGCATGCTCTACGAGCTATGGAGAAACTTCATCCATTGCCGCCCTTGCACTTGTCCGGTTTATAGAGATTGTAGCG
CTTGAAGATGACATAGTGACCAAGGCGGGTCTGTTTTGCGCATGGAGGTGTCGAATGCAACACCGTTCTTC----TCTTC
CTCTTTGGGGGGCAGGGCCAGCGAGGGCATGGACAATACGGGTTTGCTCCACCGTGAACGAACGTGCCGCCTGAGCTTAT
CGCTCGCTAGGTTACAAGCATGGATATCCTTCGTGGCCTTGTCTGAAGTGGCACGGTGCGACTCACGTTCTGCAACACGA
CGCGCCTTGCCC-TCTCACCATGGGCACGTTTGGCCCCAAACTCGAAGCCTAACACCAT-GGGGAAAGGACCCAACACAC
GGGTTCCTCGGACACTGCTGGCTCTGGGTCCGAAGCAGACACACACCTCAAGCCATCGACGGGCG---CATCACCGCCAT
TGAATGTAAGCCCCACTGGCGCTAACACGCGAGCGAAGCCATGTGGTTGAGTATCCTCTTGGAACCGACGGAAAGCCAGT
CAGATCCAAGTTGACGTACTTAAATTCGCTGCCTGCAATGTCGAAAATGACCGAAGATCACCAAAGAGGAGCTGGGCAAA
GTGGATTGGAAGCGGGGTGGAGTGGCAAAAATGGCAAGGGTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS------------------S-----SSSS--------S----------------------S---------------
------------------------S---------------S-----------S-----------SSS-SSSSSSS-----
--------S--------------S---S---------------------------S------------------------
-----------------S-----------------------------------------------------S---S----
-S-------S--------------------S---------------S--------------S---S------SS------
----------------------------------S--------------S-------S--------------S---S---
-----------S--S----------S----------------------------SS------------------------
-----------------S-------S------S----------S-S-------------S---S----------------
---------------------S--------S-------------------------------------------------
--------------------------------------------S-------------------S---------------
-----------------------S-----------------------------------------S--------------
--S-S-S------------------------------S------------------------------------------
-------------S---SS--S-----------------------S----------------------------------
------------S---------------------S----------------------------------S----------
-------S------------------------------------------------S-----------------------
---------------------------------------------SS-S-------------------------------
------------------------------------S----S-----------------SSSS-SSS-------------
--------------------------------S----S------------------------------------------
-------------------------S----------S------SSS------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----------------------------------------SS----S--------S-----
--------S------------SS-SS------------------------------------------------------
------------------------------S-----------S---------------------------S------S--
-----------S----S----S------S------------S----------------S------------SSSS-----
-------------------------------------------S----------SS-S--S-------------------
-------S------------S-S--------------------S--S-----------------------------S--S
---S-----S--S----------------------S-------S-------------S-S---SS----S-----SS--S
-----S----------------------------------------------------S------SSS----------S-
-S---S-------------------SS-----S-------------------------S---S-S----S------S--S
--S-----------------S-S-----------S------S----------S------------S--------------
-S---S--S---S---------S-------------------
>forward_26
------TACTCAAATCCTGGCTCCGC------------------------------------------------------
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>reverse_1858
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-----------------CGTCCCCTCATATGCCCTTC-------------------------------------------
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