>input_sequence_75263
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---------------------------------------------------------------------ATGGACGCCGG
CGCCGGCCACGGCGGCGCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCG
CGCCGTGGCAGTCGTC------CTCCTCGCACGCCCGCCGCGCGGGGACGG---CGACGGACGAGGAGTGGTGGCACCAG
GTGGGGGAAGAG---GCGAGGGCGGGACCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTCATGAA
GGTGCGCGAGTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACC---GGC
ACGGGGCCGGCGCCGGCGCTGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGC
CACGGCGCCAGCCCGGAGGG---CCCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGAC
GGGCTCCGCCAGGTCCTCCATGGACCTCGGCAGCCGCGACGCGCCCTCGCTGTTCCATCACCCGCTGCCGCAGCAGCCGC
ACACTCCCCCCGCCGCCGC------GCGGGGCTGA---------------------------------------------
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>chr7B_1_TraesCS7B01G095800
GCACCAGGGATGTCGATCCCCGCGTCCTCTAGCAGTGACTGTGGAGGTAGCGGTTGTATACCAAGGGTTGCCAGCGACCC
TGGGTAAGTGGGACTTGCACTACTCCGTCGACGGCAAGACGTAGCCACAACGCCGACAAAATGGGCGTCGGTGGATGTGG
CAGTGGTGAATAGGTTGGAAGCTGGATAGTGGCGACGAGGGCGAAGAGGGTAGGGTGTTCGTGGGGTGAGGAGGGTGAAT
GACAAGTGTGCGACCGACAGGCACGCCAGGGAAGGACGCCGCGGGCGTCCGGTACGTGTCCGCGTGGATGCAACTTCAGG
CCAAATTTGAACTAGGAATGGGTCCAAAGGGACGTCGTGCGTCGCCGCGTTGGGGTGATTTTTTTGTCCCATAAACCCAG
ATAGACGCGAACGGCCAAAATGGGTCCGGCGCATTAGAATTCGCTTACAACAAATGTCGTTGCTGTAGGAGTGCAACTTT
GTATGGGAGGGGGGAATGGGGCACCATCCAACGAATCATACCCCGAGCAAGAATAACCGCCCTTC----CTTCTGCTCTG
TATCCTCACTGTTCTCCGGACCCACCCGCACAACGTCTGGCCCCACTGACAACCCCGCCCCGCGGGGTACTGATCCCCGC
CCGTCACCGTCCGTCAAGCAGCAACGACGTGACAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCGTCTCCA
CTGACACCTGTGCCCC-AAACCACGGGCCCCATGGACCT------------------CCACCACGCGGGAGGTGGGCCCG
GGATCACGAGGCGAAGGGCTGGACGGATGGATGGCAGTTGGGCTCACCATGCGCAGGCGCGAGGGGGCGCGCGCCGTCGC
GGGCAAGTGGAAACCGCCTCCCCGATAAAACCCTCGCGCCCCTCCCCGCTCTCGCC------TCCGCCTCCGTGAATCCC
CCACGCCCTGCGCACGCACAACGCATCGCTCTCCAGGAAAGACTTTCGGTTAACCGCCCCGAGATCCCCATGGACGCCGG
CGCCGGCCACGGCGGCGCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCG
CGCCGTGGCAGTCGTC------CTCCTCGCACGCCCGCCGCGCGGGGACGG---CGACGGACGAGGAGTGGTGGCACCAG
GTGGGGGAAGAG---GCGAGGGCGGGACCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTCATGAA
GGTGCGCGAGTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACC---GGC
ACGGGGCCGGCGCCGGCGCTGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGC
CACGGCGCCAGCCCGGAGGG---CCCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGAC
GGGCTCCGCCAGGTCCTCCATGGACCTCGGCAGCCGCGACGCGCCCTCGCTGTTCCATCACCCGCTGCCGCAGCAGCCGC
ACACTCCCCCCGCCGCCG------CGCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTGTAGTGGGGCGGCGGA
GGCGATAAGGCGGGACGTCCCTTTCTTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGGTG------GTG
GTGCTCCTGCAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACAG---CAGTAGAACTCAATTTTGT
CGTCGTAATAGTCACAGAATTTGTCCAGAAAACTCCT-CTCGCTTGTGTCTATGATCATCATCTCCCATCATCATG-TAT
GAAACATATATTTGTAGATTCCTGAT------ATCATCAGTAGTGCTGCAGTCGATGATATTACAAATTAAGATTTTCCT
TTTTTGTGCATGACAATTCCTACCTTTCATTTATTACAAAGATATGGTTCGAATTTTAATAATTGCAAAGATATTGCCCA
AAGAAATACCACTAATATA---GATAGCCCAGCAACTTAGGGTGGCGCCTCTGCGAGCTTTCATCATTCCAAAGATATCA
CAAACAAGAAATGGCAAGTACTTAACTACTACTAATATAATCCAGCAACTTAATTAAGACCGCAAATCGGCTAGTGCATT
GGATGCTCAGAAAATGCGGGGGAGGG----CGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCAATAGCCACCCGTGA
GATGATGAGATCAGATTTTA-TGTTTCCGACACGGTTCGTGCAATCACATCTGCATAGAT-------------TGGCACC
TCATCATCAAGAATCAAATAGAGTATGCCTGCCCGCTGCTCAGTTTTTTGTTTTGTGAAC------TGCACGCTGGGTCT
GGACGGCGACCTCCGCTTGTCG-ACTGGCGATTGCCAAGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTG
TCTGGTCCAAAACTAGTTGACCCTGGGTTTACTCCTCGTCGTAGCTCAACAAGTGACAGAAGAATTAGCCAAAAAGAAAA
AAGA----GCAGTTGATATACGATCCTTTCTTTAAAATAAAAGG
>chr7A_478
TTTGGT--------------------------------------------------------------------------
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--ATGGGAGGGGGGATGGC-GCACCATCCAAGGAATCGTACCCCGAGCAAGAATGACCGCCCGTCCTGGCTTCTGCGCTG
CATCCTCACTGTTCTCCGGGCCCACCCCCACAACGTCTGG--CCACTGACAACCCTGCCCCGCGGA--ACTGACCCCCGC
CCGTCACCGTCCGTCAAGCAGCAACGACGTGGCAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCATCTCCA
CTGACACCTGTGCCCC-AAACCACGGGCCCCACGGAC------------------CACCACCACGCGGGCGGTGGGCCCG
GGGTCACGAGGCGAAGGGG--------TGGATGGCAGTTGGGCTCAGCAGGCGCGAGCGCGAGGGGGCGCGCGCCGTCGC
GGGCAAGTGGAAACCGCCTCCCCGATAAAACCCTGGCGCCCCTCCCCGCTCTCGCC------TCCGC---------TCCC
CTCCGCCCCGCGCACGCGCCACGCATCGCCCTCCAAGAAAGAGTTCCGGCCAACCGCCCCGAGATCCCCATGGACGGAGG
CGGCT---ACGGCGGCGCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCG
CGCCGTGGCAGTCGTCGTCCTCCTCCTCGCACGCCCGCCGCGCGGGGCCGACCACGACGGACGAGGAGTGGTGGCACCAG
GTCGGGGAAGGG---------ACGAGGGCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTGATGAA
GGTGCGCGAGTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACCACCGGC
ACGGGGCCGGCGCCGGCGCCGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGC
CACGGCGCCACCCCGGAGGGCGCCCCGGGCGGCGAGCTCCCGGGGTACCCCGACTTCTCCGCCCGCTTCGCCGCGCCGCC
GGGCTCCGCCAGGTCCTCCATGGACCTCGGCGGCCGCGACGCGCCCTCGCTGTTCCACCACCCGCTGCCGCAGCAGCCGC
ACACTCCCCCCGCCGCCGCCGCCGCGCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTGTAGTGGGGCGGCGGA
GGCGATAAGGCGGGACGTCCCTTTCCTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGCTGCTGGTGGTG
GTGCTCCGGCAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACCATCACAGTAGACCTCAATTTT--
-GTCGTAATAGTCACAGAATTTGTCCAGAAAGCTCATCCTCGCCTGTATCTATGATCACCATCTCCCTTCATCATG-TAT
GAAACATATATTTGTAGATTCCTGTTATCATCATCATCAGTAATGCTGCAGTCGATGATATTACAAATTAAGA-TTTCCT
TTTTTGTGCATGACACTTCCTACCTTTCATTCATTGCAAAGATATGGTTCGAATTTTAATAAGTGCAAAGATATTGCACA
AAGAAATGCCACTAATATAGTAGATAGTCCAGCAACTTAGGGTGGCGCCTCTGCTAGCTTTCATCATTCCAAAGATATCA
CAAACAAGAAATGGCAAGTACTA----ACTACTAATATTGTCCTGCAACTTAATTAAGACCGCAAATCTGGCAGTGCATT
GGATGCTCGGAAGATGCGGGGGAGGTAGCATGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCACTCGCCACCCGTGA
GATGATGAGATCAGATTTTAATGTTGCCCACACGGTTCGTGCAATCACATCTGCATAGATGGTTGCATCAATCT-GCACC
TCATCATCAAGAATCAAATAGAGTAGTG----CCGCGGCTCAGCCTTCCGTTTTGTTAAAATCAAGTGCATGCTGGGTCT
GGATGGCGACCTCCGCTTGTCG-ACTGGCGATTGCGAGGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTG
TCTGGTCCAAAGCTAGTTGACCCTGGGTTTACCCCTCGTCGTAGCTCAACAAGTTACAGAAGAATTCGCCAAAAAGAAAA
AAGA----ACAGTTGACAGACGAT--------------------
>chr7D_485
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----GGGATGGGGGATGGC-GCGCCATCCAACGAATCATACCCCGAGCAAGAATAACCGCCCGTCCTGGCTTCTGCTCTG
TATCCTCACTGTTCTCTGGACCCACCCCCACAACGTCTGG--CCACTGACAACCCTACCCGGCGGA--ACTGACCGCCAC
CCGTCACCGTCCGTCAAGCAGCAACGACGTGACAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCGTCTCCA
CTGACACCTGTGCCCCGAAACCACGGGCCCCACAGACTCCCGAGAGAGAAAGCCCCACCACCACGCTGGAGGTGGGCCCG
GGGTCACGAGGCGAAGGGATGGATGGATGGATGGCAGTTGGGCTCAC------CAGGCGCGAGGGGGCGCGCGCCGTCGC
GGGCAAGTGGAAACCGCCTCCCCGATAAAACCCTGGCGCCCCTCCCCGCTCTCGCCTCCGCCTCCGC---------TCCC
CTCCGCCCCGCGCACGCGTCACGCATCGCTCTTCAAGAAAGAGTTTCGGCCAACCGCCCCGAGATCCCCATGGATGCCGG
CGCCGGCCACGGCGCCTCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCG
CGCCGTGGCAGTCGTCG---TCCTCCTCGCACGCCCGCCGCGCGGGGACGACCACGACGGACGAGGAGTGGTGGCACCAG
GTGGGGGAAGGGGGCGCAGGGACGGGGGCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTGATGAA
GGTGCGCGAGTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACCACCGGC
ACGGGGGCGGGGCCGGCGCCGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGC
CACGGCGCCAGCCCGGAGGGC---CCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGCC
GGGCTCCGCCAGGTCCTCCATGGACCTCGGCGGCCGCGACGCGCCCTCGCTGTTCCACCACCCGCTGCCGCAGCAGCCGC
ACACTCCCCCCGCCGCCGC------GCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTATAGTGGGGCGGCGGA
GGCGATAAGGCGGGACGTCCCTTTCTTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGGTGGTGGTGGTG
GTGCTCCGGCAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACAG---CAGTAGAACTCAATTTT--
-GTTGTAATAGTCACAGAATTTGTCCAGAAAGCTCCT-CTCGCTTGTATCTATGATCATCATCTCCCATCATCATGTTAT
GAAACATATATTTGTAGATTCCTGTTATCATCAT------TAGTGCTGCAGTCGATGATATTACAAATTAACGTGGTATA
-TTTTTTGCATGACACTTCCTACCTTTCATTCATTGCAAAGATATGGTTCGAATTTTAATAATTGCAAAGATATTGCACA
GAGAAATACCACTAATA---TAGATAGTCCAGCAACTTTGGGTGGCGCCTCTGCTAGTTTTCATCATTCCAAAGATATTA
CAAGCAAGAAATGGCAAG-----------TACTAATAGAGTCCAGCAACTTAATTAAGACCGCAAATCCGCCAGAGCATT
GGATGCTCGGAAGATTCGGGGGAGGTCACTCGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCACTCGCCACCCGTGA
GATGATGAGATCAGATTTCGATGTTGCCGACACGGTTCGTGCAATCACATCTGCATAGATGGTTGCATCAATCTGGCACC
TCATCATCAAGAATCAAATACGAGTATG----CCGCTGCTCCGTTTTTTGTTTTCTGAAC------TGCATGCTGGGTCT
GGACGGAGACCTCCGCTTGTCGTACTGGCGATTACCAAGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTG
TCTGGTCCAAAACTAGTTGACCCTGGGTTTACTCCTCGTCGTAGATCAACAATTGACACAAGGGTTCGCCAAAAAGAAAA
GAAAAATGGCAGTTGATGTACAATTCTTTCTTTAAAATAAAAGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------------SS-SS------------------------------------------S-----------------
---------------------------S------------SS-------------S---------SSS-----S------
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--------------------------------S----SS-----------------------------------------
--S---------------S----S-------------------------S------------------------------
----------------------------------S--------------------------------SSSSSSSSS----
-SS-----S--------S-S---------------S------S------SS-----------------------------
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--------------------------------------------------S-----------------------------
----------S------SS--S----SS----------------------------------------------S-----
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-------------------S------------------------------------------------------------
------------------------------------------------------------------------------S-
-------------------------------S-------------------------S----------------------
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-------S----------------------------------------------------------------------SS
S------------------------------S---------------S--------------------------------
------------------------S-------------------------------------------------------
---------------S---------------S---S-----------------------------------------S--
---------------------------S--------------------------S-------------------------
----------------------SSSSS------------S----------------------------S--S--------
--------S---S------------S----------------------------------------S-S-----------
-------------------------S------------------------------------------------------
-------------------------SSSSSSS--------------------------------------S---------
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------------------------------------------------------------------S-------------
------------------------S-------------------
>forward_96
----------------------------------------------------------------------------ACCC
TGGGTAAGTGGGACTT----------------------------------------------------------------
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>reverse_2108
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---------------------------CCCAGCAACTTAGGGTGGC----------------------------------
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