>input_sequence_75258
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-----------------------------------------------------------------------------ATG
GAGTTGCTCCTTCTCCCTTCCCGTGCCACCGTCTCCCGCCGGCTCCAGCCAACCGCTCCACTCCGCCGCGCCAGCGCGGC
CACCTTCCGGCCGTCGGCCAGCTCCGGCAATGTCGAGGCCACCACCGACGCCACGGCGACAACGTCGGTAGCCAAGACCG
GCCAAGAATGGCGCGCGGGCGGCCGGCAGGGCCAATCACCGTTCGGGCTCGGCCTGGACCTGTCCGAGGAGATGAGGCGC
GGGATGATGTGGCGGATGCTGGCCTTCCCCGCGGCGGCGGTGGCGGCAGAGGCCGCGCTCCTGTGGGCGCTCGACAGCGG
CGTCGACGCGCCCGCGTGGGCCAGCAAGGCGGGGTCGGCCGTGCTGTTCGCTGCGGGGCTGCTCGGGTCCCAGTACGGGT
TCTTCTCCTCGAGGTGGGACGCGGCGGAGACGGGGTCGGTGGTGGGGTGGGAGCTCGCCGCCCGGCACTGGAACGCGCTG
TCCATGGCCAGGGGTTCGTCCATGGAAGAGGAAGATGAGGAGGACGACGAGGAGTGGGAGTGGGTGTACGAGGAAGACGA
GGATGAAACTGACGATTAG-------------------------------------------------------------
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>chr6D_1_TraesCS6D01G303300
CTACCGCCACCATTTCCGCCGCGATACGGGCCCCGGCGGCCCTTATCCTCTCCTTCCCACGGCGGGTCGCCATTTCCGGT
GGGACTCATATTCTGCCCGACCGGTGATGGGGAAGGAGAGGGGTTCCGGCTGCCGGGACCGCGAGGATCCTGCCCCAGAG
GACCCGTACGCCCGTTGAGCCGACGCCATGGAGCGGCGGAGTGCAATGCGGACCGCCACTGCCTCCGCCAACCCGCACGA
GATGACAGCCCATTCGACGGATCTGGACTGATCGGAGTCCGATCCGCTTCCTGCCATGCCGGAGAAGGCCGGAAACCGCC
GGAGGTGAGCTCGGGTGGCGAGGGGAGTGGAGTGAAGTGGCTAGGATTTGGTCCGGTGAGCGGATGGGACGAATATATGT
GGGGTCGGATGGGCCAGCATAGGCTGGGTCCGACGTGGCGGGCGCGCCCGGGCGGCCCCATATCCGCCCCATATTTGGGT
TGTATATGTGGGGTGCCAGTCAACCCGGCCGTTTGAGGTGTCTGTCTGGGTTTGAGGAGTGTTTGGGGCGCCCAACTGTA
GATGCTCTAACAACA--ATATGACTGAATTTTTTATATCATACTGATTTCAACGTTATAAAAAAGACTAAAACAA--A-A
AAAATATGGCACTTCACTAAAAATTATAGGAGATCACAAAGACAATTGTAGCATGAGGCTATAAAATGCTTTGAAAG---
-------------AATTCC-TTTAAGCAATCCTATAATCACTAGTATAGCATACGAAACTCCAAGCATCCCCTATAACGA
ATTTCGAAATGACACTTGTATAAAGTACAGACCTTCGGCTTGGGTTGAAATCCTCCATTTTCTCATAATTTGTTTGTGTT
CTTTAAGAAAGCAAAAAAATCTCTCGCATTGCAATACGAGGATAACACATGCGCGGCCTTCATTCTTT--------TCCC
GTCTTCCCACACACGGACGAACGGTCACAACCCACA-------CTCCCACAGGCCACAGCACTCCAAGCAGGCGGCCATG
GAGTTGCTCCTTCTCCCTTCCCGTGCCACCGTCTCCCGCCGGCTCCAGCCAACCGCTCCACTCCGCCGCGCCAGCGCGGC
CACCTTCCGGCCGTCGGCCAGCTCCGGCAATGTCGAGGCCACCACCGACGCCACGGCGACAACGTCGGTAGCCAAGACCG
GCCAAGAATGGCGCGCGGGCGGCCGGCAGGGCCAATCACCGTTCGGGCTCGGCCTGGACCTGTCCGAGGAGATGAGGCGC
GGGATGATGTGGCGGATGCTGGCCTTCCCCGCGGCGGCGGTGGCGGCAGAGGCCGCGCTCCTGTGGGCGCTCGACAGCGG
CGTCGACGCGCCCGCGTGGGCCAGCAAGGCGGGGTCGGCCGTGCTGTTCGCTGCGGGGCTGCTCGGGTCCCAGTACGGGT
TCTTCTCCTCGAGGTGGGACGCGGCGGAGACGGGGTCGGTGGTGGGGTGGGAGCTCGCCGCCCGGCACTGGAACGCGCTG
TCCATGGCCAGGGGTTCGTCCATGGAAGAGGAAGATGAGGAGGACGACGAGGAGTGGGAGTGGGTGTACGAGGAAGACGA
GGATGAAACTGACGATTAGTTGGGTTAGATACAGTCTGTGATAGCAAGGTAATTGGTTGGATTAAACCTTGTAA---AAA
TGCATGTGACAGTGCTTGGTTTGGTTAAACCA--TGCAGTAAATAGACTGGTTACATGTAGGCCTAGAACTAGCAC----
TTATTTTCCTGTCATTTCTGTATCGGCTCCTGTGAATATAGCCACCATACTTTTCTTTTTCTTACAACGTTGTGGCCACA
ATTGGTGCGTACGGTAGAGTGTGTTATAAGGGATAGAGGGATTGGTGAAATAGTTGCGGAATATGATGAATGTATTACTG
AGCCTAGAGGACGAGTATGTATTGAGTACAGGACTTGAAGGGCAAGAAGCCTCTCCTGGAGATAAGGTAGGACATGGATT
ACAAATCCATCCCTCTATCCCTTATAACAGAGTGAATTCCAATGAATTCGTGTATGTTCTACTCCCTCCGTCCCAAAATG
CAAGGTCATTTTTGACATAGGGAA--------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TATTTGACAATCTGTAAGATGAACCGATTCTAACACTCCTTTTGAAATTTAAATTGCA
CCCATTTCTAACATCTTTCGGTTTCCGCTCTCTGCCCACACACTAACATATTGCGTGTTTGGGCTTCAGTTTCGACAGAA
TCAGTTAGGGATTCGCTCTGTTGGCAAAGCTGCTTCGACGTAATCCGCTTTGGCATTGAAGTACACCGGGACGTGCGTCA
GTGCAATATATCTAAAAATAGCCCGAATCGGATTTTGGCTGGTTTTTCAAAGACTGATTGCTTGTTTCAGATTCAGCCTT
CTCAAAGCTGTATATGGTTTCTAAAGCTGAAACAAACACCCCCTAACACACCCAACTCTTGTAATCCACCATAATCAATT
GATCATGAATGCATTTGCTGTCTTCTACCTGCTTAATATATGAATGCCGGTGGTTCACCGGTTCTTTCAAAAAAAAAAAC
ACCCCCCTAACATTGACGATGGCATTGTTTCAAACTACTCTGTAGCAGTCTTGACCAACATAACCA
>chr6A_568
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-------TAACAACA--ATATGACCAAAATTTTCATATCATATTGATTTCAACAATATAAGACAGACTAACACAA--ACA
AAAATATGTCACTTCACTAAAAATTATAGGAGATCACAATGAAAATTGTAGCATGAGGCTATAAAATGCTTTGAAATTTC
CACTATCCCACATAATTCATTTTAAGCAATCCTACAATCACTAGTATAGCATACGGAATTCCAAGCACCCCCTATAACGA
ATTTCGAAATGACACTTGT-----------------------GGTTCAAATCCTCCATTTTCTCATAATTTGTTTGT--T
TGTTAAGAAAGCAAAAAAATATCTCGCGTTGCAATACGAGGATAACACATGCGCGGCCTTCATTCTTT--------TCTC
GTCTTCCCACACACGGACGAACGGTCACAACCCACAACCCACACTCCCACAGGCCACAGCACTCCAAGCAGGCGGCCATG
GAGTTGCTCCTTCTCCCTTCCCGTGCCACTGTCTCCCGCCGGCTCCTGCCAACCGCCCCACTCCGCCGCGCCAGCGCGGC
CACCTTCCGGCCGTCGGCCAGCTCCGGCAACGTGGAGGCCACCACCGGCGCCACGGCGACGACGTCGGCAGCCAAAACCG
GCCAAGAATGGCGCGCGGGCGGGCGGCAGGGCCAGGCGCCGTTCGGGTTCAACCTGGACCTGTCCGAGGAGATGAGGCGT
GATATGATGTGCCGGATGCTGGCCTTCCCCGCGGCGGCGGTGGCGGCGGAGGCCGCACTCCTGTGGGCGCTCGACAGCGG
CGTCGACGCGCCCGCGTGGGCCGGCAAGGCGGGGTCGGCCGTGCTGTTCGCTGCGGGGCTGCTCGGGTCCCAGTACGGGT
TCTTCTCCTCGAGGTGGGACGCGGCGGAGACGGGGTCGTTGGTGGGGTGGGAGCTCGCCGCCCGGCACTGGAACGCGCTG
TCCATGACCAGGGGTTCGTCCACGGAAGAGGAAGATGAGGAGGACGACGAGGAGTGGGAGTGGGTGTACGAGGAAGACGA
GGAAGAAACTGACGATTAGTTGGG-TAGATACAGTCTGTGATAGCAAGGTAATTGGTTGGATTAAACCTTGT-A---AAA
TGCATGTGACAGTGCTCGGTTTGGTTAAACCACATGCAGTAAATAGAATGGTTACATGTAGGCCTAGAACTAGCAC----
TTCTTTTCCTGTCATTTCTGTATCGTCTCCTGTGAATATAGTCACCATACTTTTGTTTTTCTTACAACGTTGTGTCCACA
ATTGGTGCGTACG-------------------------------------------------------------------
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----------------------------AGAGTGAAATCCAACGGATTCGCCTATGTTCTACTCCCTCTGTTTCAAAATA
TAAGACCATTTTTGACATTAAAAATTACTCCCTCTATTTCCAAATACAAGACCTTTTAGGATTCCACAATAGACTATAAG
GAGCTAAATGAGTGAATATACGCTCTAACATATGTCTATATACATCTTTATATAGTTTATAGTGGAATCTCTAAAAGTTC
TTATATTTAGAAACGGATGTAGTATTTGACAATCTGTAGAATGAACCGATTCTAACACTCTCCTTAAAATTTAAATTGCA
GCCATTTCTAACATCTTTCAGTTTCTGTTCTCTGCCCATACACCAAGGTATTCTTTGTTTGGGCTTCAGTTTCGACAGAA
TCAGTTAGGAATTCGCTGTGTTGGCAAAGCTGGTTCGACAGAATCCGCTTTAGCGTTGAAGTACACCGGGTCGTGCGTCA
GTCCAATGTCTG-AAAAATAGCCCGAATCAGATTTTGGCTGTTTTTTCAAAGACTGGTTGTTTGTTTCAGATTCAGCCTT
CTCAAAGCTGTAAATGGTTTCTAAAGCTGAAACAAACACCCCCTAAC---------------------------------
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-----------ATTGACGATGACATTGTATCAAACTACTCTGTAGCAGTCTTGACCAACATAACCA
>chr6B_568
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-------TAACAACAGTATATGATCGAATTTTTCATATCATATTGATTTCAACAATATAAGACGGACTAAAACAAACA-A
AAAATATGTCACTTCACTAAAAATTACAGGAGATCACAAAGAAAATTGTAGCATGAGGCTATAAAATGCTTTGAAATTTC
CACTATCCCACGTAATTCC-TTTAAGCAATCCTACAATCACTAGTATAACATACGAAATTCCAAGCACCCCCTATAACGA
ATTTCGAAATGCCACTTGT-----------------------GGTTGAAATCCTCCATGTTCTCATAATTTGTTTGT--T
CTTTAAGAAAGCAAAAATATCTCTCGCATTGCAATACGAGGATAACACATGCGCGGCCTTCATTCTTCTCTGATTCTCTC
GTCTTCCCACGCACGGACGAACGGTCACAACTCACAACCCACACTCCCACATGCCACAGCACTCCAAGCAGGCGGCCATG
GAGTTGTTCCTTCTCCCTTCCCGTGCCACCGTCTCCCGACGGCTCCAGCCAACCGCCCCACTCCGCCGCGCCAGCGCGGC
CACCTTCCGGCCGTCGGCCAGCTCCGGCAACGTCGAGGCCACCACCGGCGCCACGGCGACGACGTCGGCAGCCAAGACCG
GCCAAGAATGGCGCGCGGGCGGCCGTCAGGGCCAGGCGCGGTTCGGGCTCGACCTGGACCTGTCCGAGGAGATGAGGCGT
GATATGATGTGGCGGATGCTAGCCTTCCCCGCGGCGGCGGTTGCGGCGGAGGCCGCTCTCCTGTGGGCGCTCAACAGCGG
CGTCGACGCGCCCGCGTGGGCCGGCAAGGCGGGCTCGGCCGTGCTGTTCGCTGCGGGGCTGCTCGGGTCCCAGTACGGGT
TCTTCTCCTCGAGGTGGGACGCCGCGGAGACGGGGTCGGTGGTGGGGTGGAAGCTCGCCGCCCGGCACTGGAACGCCCTA
TCCATGGCCAGGGGTTCGTCCATGGAAGAGGAAGATGAGGAGGACGACGAGGAGTGGGAGTGGGTGTACGAGGAAGACGA
GGAAGAAACTGACGATTAGTTGGG-TAGATACCGTCTGTGATAGCAAGGTAATTGGTTGGATTAAACCTTGT-ACTAAAA
TGCATGTGACAGTGCCCGGTTTGGTTAAACCACATGCAGTAAATAGAATGGTTACATGTAGGCGTAGAACTACCACTTCG
TTCTTTTCCTGTCATTTCTGTATCGACTCCTGTGAATATAGTCACCATACTTTTCTTTTTCTTACAACGTT-----CACA
ATTGACATAT----------------------------------------------------------------------
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----------------ATAGGGAA--------------------------------------------------------
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----------------------TATTTGACAATCTGTAAGATGAACAGATTCTAACCCTCTTCTTAAAATTTAAATTGCA
GTCATTTCTAATATCTTTCAGTTTCTGTTCTCTGCCCACATGCTAAGGTATTGTTTGTTTGGGCTTCAGTTTCGACAGAA
TCAGTTAGGGATTCGCTGTGTTGGCAAAGCCGGTTCGACATAATCCCCTTTGGCGTTGAAGTAAACTAGGACGTGCTTCA
GCCCAATATCTG--AAAATAGCCCGAATCAGATTTTGGCTGGTTTTTCAATGACTGATTGTTTGTTTCAGATTCAGCCTT
CTCAAAGCTGTATATTGTTTCTAAAGCTG---------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-----------------S--------S--------S----------SS-----S-S-----------------
--------S---------------------------------S---------------------------------S---
----------------------------------S-----------------------S--------S------------
-------------------SSSSSSSSSSSSSSSSSSSSSSS-----------------------------------SS-
------------------------------------------------------------------------------S-
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--------------------------------------------------------S-----------------------
------------------------------S----------------S------------S-------S-----------
----------------------------------SS-S-------------S---------------------------S
-SS--------------------------------------------S--------S-----------------------
----------------------S---------------------------------------------------------
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---S--------------------S-----------------------------------------------S-------
----------------S------------------------------S--------------------------------
--S----------------------S---------------S--------------------------------S-----
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----S-S-----SS----------------S--SS------S
S---SS--------------------------------------------------------------------------
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------------------------------------------------------------S-S--S--------------
S------------------S-----S-S------------------SS-----SS-------------------------
-----------------S--------------S------S--------------S-------------------------
--S------S-SS----------------S------------------------------S-------------------
-----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------S------S-------------------------------------
>forward_504
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----TATGTGGGGTGCCAGTCAAC--------------------------------------------------------
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>reverse_1962
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-----------------------------------------GCAAGAAGCCTCTCCTGGAG-------------------
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