>input_sequence_75256
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----------------------------------------ATGGATAGCAAAACCAGTGCTAGACACAACGCCGACCTGC
TGGAGCGCATGCTGCTTGATGGAAGAGCAGAGCCAACGT-ACCTGCCGTTATCACTTTTGGAAGACATCACAAATTGTTT
CTGTGTTGATCAGGAAATTGGCAGAGGTGGATTTGCAGTGGTTTATAAGGTACTAACCAACCTCTAGTGAGCT---TTTC
TCAATCCTAATCGC-----ACT---TGATTGGAAAGAGAAACACCATATGAACATGACAGTAACAGCACTACACATGCAT
GCCCACACGTTAACACTGGCAAATACACGTTCTGACTGCAGGGAAAAGTGGGAAAAGGAATGGTCGCTGTGAAGAAGCTA
TCTAACACATTCAAGTTGCCTGAGGAAAAATTCCACAAAGAGGTTGAGTGTCTCACGAAGGCCAAGCACAAAAATATAGT
GCGTTTCTTGGGCTATTGTTCTGAAACCCATGGCAGAATTGCAAACATTGACGGGAAGTTTGTCATGGCAGATACACGAG
AGTGGTTACTATGTTTTGAGTATGTACCGAACGGAAGTCTCGATAAGTATATTACTGGTATGATCATAACATAA------
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>chr6D_1_TraesCS6D01G041900
CAAGGCCTCGCACCCTCGCTCAAGGCAGCTGCAGGAAAGAGATGTATCGGAGGCGGAGCTCGTCGGCGGCGTTTCCTCAC
GGGGTTGCCGCTCCGGGGGCGGAGCTCGTACGTGGAGGAAGGATAAGATGAAGATTGAATTCAAGATAGTCAAGGTACCA
ACAACTCCAACCATAACTAAATATTTTAGACCTTGTTGTTAGATTAGAGAACGGCGAACACGGCCGACCGAATTTCTTTA
TGTAAAACGAAATGACGTACGGACACTAATCGCATCATTACTTTAGTGGACGCAACGACCATCATCACCTCTACTATATG
ATTAGTTGGAGCTCAACCTGCTCTAAATCCCACACTAATCTTGCTGGAGAACATCTACCCTCCACCATCAAAGTGTTGAC
TGGGGTCGTCCTAGTCTTCCTCAAAGCTCAGCATCGAGCGCCGTGGTGATTCAGATCTCACCGATCCCTGCTCACCGGTC
GCCGGGTTCTACAGGAACCTGTTACTAGTTCTTTATACTTCTGTCCATTCAGAACTTGTTAGTTCACAATACTTTGTCGC
CGTGGTATGTATATATTTACATGTGGCGATCTTCTCTCTGTTAATTCCTGATATGAATCGCCTTTTGCTATCTATCAACA
CCCTACTGAATATACAATGTTTTGATTTCATCTTAACGAATTATGTTCTACCTCAATCTGTCCATTCCTCCTTTCTGAGG
TTCCTAATATCCTGTTGTGCTGAAGCATGCTATACAGTAGACCAAGACCAACTAGTCAGCCTTGTGCTTGCAGGATGACC
CAGATCAAACCATGCTAACTATATAAGAATCTTCAACTGTTGTTGCTGGATCTACTTTAAAACTGCTATAATTGTGTACC
TAGCTATATAGAGAGTTGAGCTGCATATATCTGAGCTCTGCTCTCTCATTATAGCTAAAGCGTTGACCCCGCAAGCTAGG
CAGCCTGGTTGAAGGTACTGCATCTTGGTATTGGTTGCAAATGGATAGCAAAACCAGTGCTAGACACAACGCCGACCTGC
TGGAGCGCATGCTGCTTGATGGAAGAGCAGAGCCAACGT-ACCTGCCGTTATCACTTTTGGAAGACATCACAAATTGTTT
CTGTGTTGATCAGGAAATTGGCAGAGGTGGATTTGCAGTGGTTTATAAGGTACTAACCAACCTCTAGTGAGCT---TTTC
TCAATCCTAATCGC-----ACT---TGATTGGAAAGAGAAACACCATATGAACATGACAGTAACAGCACTACACATGCAT
GCCCACACGTTAACACTGGCAAATACACGTTCTGACTGCAGGGAAAAGTGGGAAAAGGAATGGTCGCTGTGAAGAAGCTA
TCTAACACATTCAAGTTGCCTGAGGAAAAATTCCACAAAGAGGTTGAGTGTCTCACGAAGGCCAAGCACAAAAATATAGT
GCGTTTCTTGGGCTATTGTTCTGAAACCCATGGCAGAATTGCAAACATTGACGGGAAGTTTGTCATGGCAGATACACGAG
AGTGGTTACTATGTTTTGAGTATGTACCGAACGGAAGTCTCGATAAGTATATTACTGGTATGATCATAACATAATCGTAA
CGTTTATTGCCATGCTTATTATCTTTAT-TAAACATCATGTCATAGTCCAACCATC----TCATGCAAACATTGCAACTA
TTTAAAATGAGAAATTTTAAGATGCTTTCAAATTATTTTTAATCGTCCATTCACTTTGATCCAACAAATGTTAAAGATGG
TGACCTATTACATAC-AGGAGAGAACGACCCGTTAAGGATCTTAATGTGGCATTTACTGGACAAAATTATTCTTGCATAG
TTCACAGTTGTATTCATATCCAGAGTATTTGTATTCATTTTTGTCTGTTGGTAAAAAAAACATTACATTTGATAGGACTG
TTATCTGTTTGTATTTGCTCTGTTTTCATTCTTACTCAAGATCATAATTCATCAGCAAATACATGCTTTTGATCCATGAC
AAATATTTCGTCCCTAAAATAATATTTGCCCCCGACATGTGGGGCAACCAGCAATTCTGATCAAAAGTAGCGACGTTGGG
TTTGCTTGAAATCTTCCTGGTCGTTTTTTTTTGTCGAAAAGGGGGTCAGGCCCCGGCCTCTGCATCAGAACGATGCATAC
GGCCATATTATTGATAAGCAAAAGGTTCAACAGAAGTCTTCAGGTCTCAAAAGTAAAGAGGCTCACAAAGAGCAAAAGCA
ACATGACAGGATAGCCACAACCGGCAGGCAAAAAGATAAGATAGTAAACTAAACACCTATCCTATTACATGACCGCCATC
CAAACCGGTTGAAGATATCCCTAGCTACCGTCTCTCTTCGGATAGATCCAGTAACCAAACGCTCCCTGGCCTCCGTCGGA
GTGAGTAGCGGACCACATACGGATGAGTGTAGTGGCCCGGAAGATAGCCTGCAAGAAATGAATATTTGTTGTTCTGTTAA
AAACCAAATCGTTTCTGCAATTCCAGACTACCCATAATAAAGCACATACTCCTACACGGATATGTCTCGCTTTTTCGGAA
TCTAACCCATCTAACCACGTCCCGAATAACGTCTTGATGG
>chr6B_969
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--------TTGAAGGTACTGCAGCTTGCTCTCAATTGCAAATGGACAGGAAAATCAATTTCAGACACAAAGTCGACCTGC
TGGAGCACGTGCTCCTTGATGAAAATGCAGAGCCAACAT-ATGTATCGTTATCACTTTTAGAAGATATCACAAACTGTTT
CTCCGATGATCAGGAAACTGGGGGTGGTGGGTTTGCAGTGGTTTATAAGGTACGGGTA-CCTCAA-GCTAGTAAGATTTA
TC-------------------------------AATACTAACGGCACATGAACATCACAGTAACACCACTACATGTGCAT
GCTCACACGGTAATGTT-GCAAATACACGTTCTGACTGCAGGGAAGAGTGGGGAAAGGGCTGGTCGCTGTGAAGAAGTTG
TCCAGAACGTTTGATTTGCCTGAGCGTAAATTCCAAGAAGAGGTTAAGTGTCTCATGAAGGTCAAGCACAAAAATATTGT
GCGTTTCCTGGGATATTGTTCTGAAACGTGTGGGAGGCCTGCGGACAATGAGGGGAAGTTTGTCATGGCAGATGTACGGA
ACTGGTTACTATGTTTTGAGTATGTACCGAACGGAAGTCTTGATAAGTATATTACAGGTATGG-----------TTGTAA
TGTTTGCTGCCATATTTATATTCTTTAT-TAATGT-TATTACATAGTCCAAGCATATATTCCATGCAAATAATACAACTA
TTTAAAATGAGAATTTT-AAGATGCTCCAAAATTATTTTTAACTGTCCATTCATTTTGATCCAACAGCTGTTAAACATGG
TGTGACTGTTACTCAGAGGAGGGAATGGCCTGTTAAAGATCTTAGTGTTGTATTT-------------------------
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>chr6D_972
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-----------AAGGTACTGCACTCTGGCATTGATTGCAAATGGATACCAAAATAAGAACAATACACAAGGTTGAC---C
TAGAGCGCATGGTGCTTGATGAAAGTGCAGAGCCAACAT-ACCTGCCATTATCACTTTTACAAGAAATCACAGATAGTTT
CTCTGATGATCAACAAATTGGCAGTGGTGGGTCTGCGATTGTTTATAAGGTACGGATT-ACTCCC-GCTTGTAAGCTTTC
TCATTCCTTATCAT-----TGT---TGATCTAAAAGATAAATG--ACGTGCACATCACAATGACACACCACCACGTGCAC
ACACATTGGT-----------AATTCACATTGTGACTGCAGGGAACGGTGGGAAAAGGAATGGTCGCTGTGAAGAAGTTG
TCCATAACAATTGACATGCATGAGAATAATTTCCACAAAGAGGTCGAGTGCCTAATGAAGGCCAAGCACAAGAACATAGT
TCGTTTTTTGGGATATTGTTCTGACACGCAAGGGATGGTGGGGGACTATGACGGGAAATTTGTCATGGCAGATGTACGAA
ACTGGGTGCTATGTTTTGAGTACATACCTAACGGAAGTCTCGATAAGTATATTACCGGTATGATC---------------
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>chr6D_991
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------------------------------TTGATTACAAATGGATACCAAAATCGGTACTATAAACAAGGTTCAT---C
TAGAGCGCATGGTGCTTGATCGAAGTGCAGAGCCAACATTACCTGCCGTTATCACTTTTGGAAGACATCACAGACTGTTT
TTCCGATGATCAACAAATTGGCAGCGGTGGATTTTCCATAGTTTATAAGGTCAGAATT-ACCCCTGGCTAGTAACCTTCC
TCAATTCCAGTTGA-----AGT---TGATATAAAAAGTAAACGACATATGCACATGACAGTCAGACCACCACATGTGCAC
ATAT----GT-----------AATGCACGTTATGGTTGCAGGGAATGGTGGGGAAAAAGATGGTCGCTGTGAAGAAACTA
TCCCAAACG------ATGCATGAGAATAAATTCCACAGAGAAGTTGAATGCATTACGAAGGCCAAGCACAAAAACATAGT
GCGTTTCCTTGGATACTGTTCTGACACGCAAGGGAGAATTGAAGATTACCAAGGAAAGTTTGTCATGGCAGATGTACGAA
ACTGGTTGCTATGTTTTGAGTACGTACCGAATGGAAGTCTCATCGAGTATATTACCGGTATGATCACAA-----------
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>chr6B_995
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----------------------------------TTGCAAATGGATACCGAAATTATTATCAGACACAAAGATGAC---C
TGGAGCGCATGCTGCTTGATGGAAGCGCAGAGCCAACG-TACCTGCCGTTATCACTTTTAGAAGATATCACAAACTGTTT
CTCCGATGCTCAGCGAATAGGCAGCGGAGGGTTCGCGGTGGTATATAAGGTACAAATG-ACCTCTAGTGAGCTG----TC
TTTTTCCTCATCTGACCCCAGT---TGATCTAAAAGATGAATGACATGTGCGCATCACATTTACACCACCACGCGTCTAC
AGACAA--GT-----------AATGCATGTTGTGACTGTAGGGAATTGTGGGAAAAGGGATAGTCGCTGTCAAGAAGCTG
TCCCAACCATATGGTATGCATGAGGATAAATTCCTTAAAGAGGTTGGGTGCTTGGTGAAGGCCAAGCACAAAAACATAGT
ACGTTTCCTGGGATATTGTTCTGACACACAAGGGAGACTTGCAAACTATGAAGGGAAGGTTATCATGGCAGATCTGCGGA
ATTGGTTGCTATGTTTTGAGTATGTACCAAATGGAAGCCTTGATAAGTATATTACTGGTA----------ATGATCGTAA
CATCTATTTTGATATTTATTTATTTTACCTAATGC-CATTACATAGTCCAAGAGTC----CCACACAAACAATACCACTA
TTTAAAATTAGAAATTTCAAGATTCTCTCATTCTCTTTTTAACTGTCTGTTCATTTTGATCCAA----------------
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>chr6B_1040
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-------------------------------------------------------------------------------C
TGGAGCGCGTGCTGCTTGATGGAAGTACAGAGCCAACACG-CCTGGCGCTATCACTTTTAGAAGACATCACAAACAGTTT
TTCTGATGATGAGCAAATTGGCAGCGGTGGGTTTGCGGTGGTTTATAAGGTACAAAGT-ACCTCTATAATGTTA----TC
TCTTTCCTGATCGA-----ATCGTGTGATCTAAAACACAAACGACATGTGCACATCACAATTACACCACAACGCACGTGC
AGACAA--GT-----------AATGCATGTTGTGACTGTAGGGAATGGTGGGAAAGGGGATGGTCGCCGTGAAGAAGCTG
CGCAACACATATGGTGAATATGGGAAACAATTCTATAAAGAGGTTGAGTGCCTAATGAAGGTCAAGCACGAGAACATAGT
GCGTTTCTTAGGATATTGTTCCGACACGTAAGGGAGACCTGCAAATTACGAAGGGAAGTTTGTCATGGCAGAGGTGCGAA
ATTGGTCGCTATGTTTTGAGTATGTACCGAACGGAAGCCTCGACAAGTATATTACTGGTA----------ATGACAGTCA
CATCTATTCCTAGATTTATTTTCTTTGA-TGAAAT-GTCATCACAGTCCCTGAGTC----CAACGCAAACAATACAACTA
TTTAAATGAGAAATTTC-AGGATGCTCTTGAACTATTTCAAAGCATCTATTTATTTTGATCCAATACGTATCAAAGATGG
TGA-----------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS--------------S----------S-------------------S----S----------S-S--------
-------------------------S------------------------------------------------------
--S--S------------------S----------------------------S--SSS---------------------
-------------S------S--------SSS-----S----SS---------------------S--------------
--S----------SSS-S---------------------------S----------------------------------
--S--------SS-S-----------------------------------------------------------------
------------S--------------S-----S-------------S-------------------------SS----S
-S----------------------------------------------------------------S--S--S-------
-------------SS-----S------------SSS---S-----------S--------S----------S-S------
-----------------S--------S---------------S----------S------------SS------------
---SSSSS-SSS-SS------S---S-S--S-----S-------S---S-S----SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_421
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-GGGGTCGTCCTAGTCTTCCT-----------------------------------------------------------
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>reverse_2403
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--GAGTAGCGGACCACATACGG----------------------------------------------------------
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