>input_sequence_75214
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----------------------------------------------ATGAGGAACGGCAGCACCGTGTGCGACGCGGCGG
CGGCTGTGGGACTGGGCGTGGCGCCGCGGTACAGGGGCGTGCGGAAGCGGCCGTGGGGCCGGTTCGCGGCGGAGATCCGG
GACCCGGCCAAGCGGGCGCGGGTCTGGCTCGGCACCTACGACTCCGCCGAGGCCGCCGCCCGCGCCTACGACGTCGCCGC
GCGCACCCTCCGCGGCCCGCTCGCCACCACCAACTTCCCCCACGACCTCGTCTCCTTCCCCACGCTCCCCGCGCTGCCGC
GTCCGTCTCCACCGGCTTCCCCCGGCCCCGCCTGCAGCGCCAGCTCCACCGTCGAGTCCTACAGCGGGCCCAGGGCGGCG
AACGCGCCTCGGGCCGTGCCGCGCGCGCCAGCGCCGACGCCCTTGCTGGCGAAGCTCCCAGGCGGCGACGCAGGATGCCA
GAGCAACTGCGCCTCCTCGGCCTCCGTCGTGGACGACGCCGGCGACGAGGCTGCCTCGGCCGTCGTCCGGCCGCGCGCGC
CCTTCGTGTTCGACCTCAACCTCCCGCCGCCGTCGGACGAGCTGTGCACGGAGCTGCGGCTCTTCTAG------------
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>chr2A_1_TraesCS2A01G542700
CGCCACAGTGGAACAAGGAACAGAGCCTCTAGGCCACAACCCCACCCGCGTAATTCATTCACGATAGTAAATGATGAACC
GACACCACCCCGAACAAAACGCAGACGGCTGGGATTACA--GTAATTTACTACTACTGTGGCAATAATGAATTCCGCCAG
ACGCCCGTAATTTCCACCGCCGAATACACTTCAATTCCACCCGCAAAAAAAGAATACACTTCAATTCCGTCAGGCGTCGC
CCGTGACAGTGAGGCCGCGTCTGCGTGCCAGCCGCAGCACGGCGCACGGAGGATACGATCCGATCC-----AACCCAACC
CAACCCAACCCTACCCCC-----------TACCCAGCGTCACGTACTCCCCACGCTGCGCCGCTGGGCGGGGCGGGGCGG
TTCGATTTGAACGCCACCGAATCTCGGCGCGCAGTCTGCCGCCCCTGTGGAGCCGATCCGATCCGA----------TCTA
GTGCGGCCGGAGCGCGCTCCACGTCGCGGACAGCGCACCCACAGCCGGCGAGCGAGCTACGCGTAGT-------------
--AGCGGCGGCACAAGCCAAAGGAAACGTGTTATCCCTGCTGCCGACGCGGGAGAACAAAGTAAACTCGGCGAAGACCGG
TCTCGTGTGGGAGGGAGGGAGAGTGAGGACCAAGGGTGCGGAAGGTGGGAAGAAGCGGCCGCCCACCAACGCTGGCTGAG
CTATCCCTCC-----CGCGCGTCGCCTCCCACCCCACCACGCACCCGCACGCGCCTCCTCCCCCTTCTTCTA-CCCCCCT
CCCCCGCCCCTTCACACCATCACAGCCCACCCCACCGCGCCGCCTTCTCCTAGCTCCGACACAGCGGC--AGCCCCCTCT
GCGCAGAGTCAACAAGTCAAGCCTTTCTCAAGCCCAGAGCAGGGTAGACGCCCGGCCTGA--------------------
CCAGCTCGGGGCAGCACCCTCGGCCTCCGGTGATAGCCACTAGCCAGC-----CGCGTCTCGGCGAGGAAACAGCGGGAG
CT----------GGCTCAAGCGATTGCCGGCCGGCGTTCTACTACTATGAGGAACGGCAGCACCGTGTGCGACGCGGCGG
CGGCTGTGGGACTGGGCGTGGCGCCGCGGTACAGGGGCGTGCGGAAGCGGCCGTGGGGCCGGTTCGCGGCGGAGATCCGG
GACCCGGCCAAGCGGGCGCGGGTCTGGCTCGGCACCTACGACTCCGCCGAGGCCGCCGCCCGCGCCTACGACGTCGCCGC
GCGCACCCTCCGCGGCCCGCTCGCCACCACCAACTTCCCCCACGACCTCGTCTCCTTCCCCACGCTCCCCGCGCTGCCGC
GTCCGTCTCCACCGGCTTCCCCCGGCCCCGCCTGCAGCGCCAGCTCCACCGTCGAGTCCTACAGCGGGCCCAGGGCGGCG
AACGCGCCTCGGGCCGTGCCGCGCGCGCCAGCGCCGACGCCCTTGCTGGCGAAGCTCCCAGGCGGCGACGCAGGATGCCA
GAGCAACTGCGCCTCCTCGGCCTCCGTCGTGGACGACGCCGGCGACGAGGCTGCCTCGGCCGTCGTCCGGCCGCGCGCGC
CCTTCGTGTTCGACCTCAACCTCCCGCCGCCGTCGGACGAGCTGTGCACGGAGCTGCGGCTCTTCTAGGACGGATCCACC
GGACCCGGATCGCCGGACGAGCTGTGCGCCAAAGCTAGCGATTTTAAT--TTTTTCTTCTATTCTTTTTCCTCCTG---A
TTAGATTAGACAGATGATGTGTGCAAGAGAAGACCGATTGTACCACCAGCACTACTACTATTCTTTACGCGATAAGAATT
GCGGTTGATTGATTGAT-----------GCCCAAA-----------TTTTGCGATCTGATTAAGAGTTGATTTTTGCTTG
CCCACTTGGATGCAACTTTATGGACATCTTGCGTGCGAGTGTAACCGGAGAGCATTCGCAGCAACTTTGCGAATTGCGAG
CAAGAAATGCTTCGAATACGACCGCTGAATTGTTTACTAGTGGTGGGGTTTTGAGATGTTCTAGCCTTCGCCCGAGTGGT
TCATTCA-------------------CCTTTCCTTTGCTCCCTCCCTCCCTCCCTGGTATTTCTTCTGTGTTATATTTT-
------TTTGCAGGGTTTTCTTCTGTATTCAGACTGGACTGATGGTTCCTCTTTTTTGCCAACACTGCACTGCTACGGCC
AGTAACGAGATTAATACTTATGGGCCCACCAATTTGAAGAAGATGGTGGATCATGTTCTGGGTTTGTGTTTCATAGATTT
TGAGGAGTTTCATGGCGTGTTC-----TAACATGTGGATGACATATCAGCGATGTAGCCGCGTCGAGCTCGGGTGAAAAG
GTGATTTGTTTTTTTTATTCGTTGATGCTG-CTCTGGTTATGCCGGAGTTAGATGACGAATGTTGGTGACAAGCTCAAAA
GATTCTTCATTCTAATTTTCTTTCTTGACTAGTGTTTCCTTTTATAAAGTCAAGCGTTCTACTATTTTTACAGTTTTGTC
AGGTCAATATTTACTTGAATTGTATTATATTCTTCATGATATAAAAAGACATGTATCATCAT---AAAAAAACACTACTA
AACTGC------------------------CTATTGGCCCACCAATTTGAACGCCGTTTGAAATAAATATTGCTCCCTAC
AAACCACATTACTTATCGCTGATTTAGTAGTAGC
>chr2B_84
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---ACCGCCCCCAACAAAACGCAGACGGCCGGCTGAAATTCGTAATTTACTACTGCC---GCAATAATGAATTCCGCCAG
ACGCCCGTAATTTCCACCGCT------------------------------GAATACACTTGAATTTCGTCAGGCGTCGC
CCGTGACAGTGAGGCTGCGTCTGCGTGGCCGCCGCAGCACGGCGCACGGAGGATAC-----GATCC-----AACCCGATC
CAATCCAACCCTACCCCCGC--------CTACCCAGCGTCACGTACTCCCCACGCTGCACCGCGGGGCGGTTG-------
---GATTTGAACGCCACCGCATCTCGGCGCGCAGTCTGCCGCC-CTGTGGAGTCGATCCGATCCGATCTAGAGTAGTCTA
GTGCGGGCGGAGCGCGCTCCACGTCGCGGACAGCGCACCCACAGCGGGCGAGCGAGCTACGCGTAGTCGTCCGTCACACT
GGAGCGGCGGCACAAGC-----GAAACGTGTTATCCCTGCTGCCGACGCGGGAGAACAAAGTAAACTCGGCGAAGACCGG
TCTCGTCTGGGAGG-----AGAGTGAGGCCGAAGGGTGCGGAAGGTGGGAAGAAGCGGCCGCCCACCAACG----CTGAG
CTATCCCTCCCGCCCCGCGCGTCGCCTCCCACCCCACCACGCACCCGCACGCGCCTCCTCCCCCTTCTTCTACCCCCCCT
CCCCCGCCCCTTCACACCATCACAGCCCACCCCACCGCGCCGCCTTCTCCCAGCTCCACCACAGCGGC--GGCTCCCTCT
GCGCGGAGTCAACAAGTCAAGCCTTTCTCAAGCTCAGAACAGGCAGGACGCCCGGCGCCGGCGGCCAGATCACACGCGTC
CCAGCTCGGACAAG---CCTCGCCTTCTGGTGATAGCCAATAGCCAGGCCAGGCGCGTCTCGGTGCGGAAGCAGACGAGG
AGCTAGCTCAAGGAGTGAAGCCACAGCCGGTCGGCGTCCTA---CTATGAGGAACGGCAGCACCGTGTGCGACGCGGCGG
CGGC------GCTGGGCGTGGCCCCGCGGTACAGGGGGGTGAGGAAGCGGCCGTGGGGCCGGTTCGCGGCGGAGATCCGG
GACCCAGCCAAGCGGGCGCGGGTCTGGCTCGGCACCTACGACTCCGCCGAGGCCGCCGCCCGCGCCTACGACGTCGCCGC
GCGCACCCTCCGCGGCCCGCTCGCCACCACCAACTTCCCCCAGGACCTCGTCTCCTTCCCCACCCTCCCCGCGCTCCCGC
GTCCGTCTCGACCGGCTTCCCCCGGCCCCGCCTGCAGCGCCAGCTCCACCGTCGAGTCCTACAGCGGGCCCAGGGCGACG
AACGGGCCCCGGGCCGTGCCACGCGCGCCGGCGCCGGCGCCTGTGCTGGCGAAGCGACCAGACGGCGACGCTGGCTGCCA
GAGCGACTGCGCCTCCTCGGCCTCCGTCGTGGACGACGGCGGCGACGAGGCCGCCTCGGCCGCCGTCCGGCCTCGCGCGC
CCTTCGTGTTCGACCTCAACCTCCCTCCGCCGTCGGACGAGCTGTGCACCGAGCTGCGGCTCTTCTAGGAGGGATCCACC
GGACCCGGATCGCCGGACGAGCTGTGCACCAAAGCTAGCGACTTTTTTTATTTTTCTTCCATTCTTTTTCCTCCTG---A
TTAGATTAGACAGATGATGTGTGCAAGAGTT----GATTGTACCACCACC---ACTACTATTCTTTACGCGATAAGAATT
GCGGTTGATTGATCGAT-----------GGAGATTTGGGGCCAATTTTTTGCGGTCTC---AAGAGTTGATTTTTCCTCG
CCCACTTGGATGCAACTTTATGGATGTCTTGCGTGCAAGTGTGACCGGAGAGCATTTGCAGCAACTTTGCGAATTGCGGG
CAAGAAATGCTTCGAATACGACCGCTAAATTGTTTAGTGGTGGGG----TTTGAGATGTTC-------------------
-TATTTGGGCCTAGTGGTTTATTCATTGTTTTCTTTGCCCACTTT---CCTCCCTGGTTT---------------TTTT-
------TTTTGAGGGGTTTCTTCTGAATTCGAACTGGACTGAAGAT---TCATCTTTGCCAACATTAGACTGCTACGGTC
AGTAACGAGATTAATACCTACGGGTCCACCAATTTGAA------------------------------------------
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>chr2D_218
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-----------------------------------------------------------TTCAATTTGGTCAGGCATCGC
CCGTGACAGTGAGGCTGCGTCTGCGTGCCAGCCGCAGCACGGCGCACGGAGGATAC-----GATCCGATCCAATCCAATC
CAATCCAACCCTACCCCCGCGGCCCCGCCTACCCAGCGTCACGTACTGACCACGCTGCACCGCAGGGCGGGGCGGGGCGG
TTCGATTTGAACGCCACCGAATCTCGGCGCGCAGTCTGCCGCCCCTT-----CCGATCCGATCCGATCTAGTCTAATCTA
GTGCGGCCGGAGCGCGCTCCACGTCGCGGACAGCGCACCCACAGCCGGCGA----GCTACGCGTAGTCGTCCGTCACACT
GGAGCGGCGGCACAACCGAAAGGAAACGTGTTATCCCTGCTGCCGACGCGGGAGAACAAAGTAAACTCGGCGAAGACCAG
TCTCGTGTGGGAGGTAGGGAGAGTGAGGTTGAAGGGTGCGGAAGGTGGGAAGAAGCGGCCGCCCACCAACG----CTGAG
CTATCCCTCCCG-CCCGCGCGTCGCCTCCCACCCCACCACGCACCCGCACGCGCCTCCTCCCCCTTCTTCTA-CCCCCCT
CCCCCGCCCCTTCACACCATCACAGCCTTCTTC------CCGCCGCCTCTCAGCTCCAGCACCGCGGCTCGGCTCCCTCT
ACCCAGAGCCAAAGAATCAAGGCTGTTTGAAGCTCG------------------------------AGATCACGCGCGTT
TCATTCAGCCCCTCTGGTGGTGG-----------------TAGCCAGGCCGAGACAGTCACCGGGCGGAAGG--------
----AGCGGAAGGACTGAAGCCTCAGCGGGCCGGCGATCTACTACTATGAGGAACGGCAGCACCGTGTGCGACGCGGCGG
CGGCTGTGGGGCTGGGCGTGGCGCCGCGGTACAGGGGGGTGCGGAAGCGGCCGTGGGGCAGGTTCGCGGCGGAGATCCGG
GACCCGGCCAAGCGGGCGCGGGTCTGGCTCGGCACCTACGACTCCGCCGAGGCCGCCGCGCGGGCCTACGACGTCGCCGC
GCGCACCCTCCGCGGCCCGCTCGCCACCACCAACTTTCCCCAGGACCCCGTCTCCTTCCCCACGCTCCCCACGCTCCCGC
ATCCGTCTCGACCGGCTTCCCCCGGCCCAGCCTGCAGCGCCAGCTCCACCGTCGAGTCCTACAGCGGGCCCAGAGCCGCG
AACGCGCCTCGGGCCGTCCCGCGCGTGTCAGCGCCGGCACCTTTGCTGGCGGAGCGCTCCGGCGGCGACGCAGGATGCCA
GAGCGACTGCGCCTCGTCGGCCTCCGTCGTGGACGACGGCGGCGACGAGGCCGCCTCGGCCGCCGTCCGGCCTCGCGCGC
CCTTCGTGTTCGACCTCAACCTCCCGCCGCCGTCGGACGAGCTGTGCACCGAGCTACGGCTCTTCTAGGATA----CACC
GGACCCGGGTCGCCGGACGAGCTGCGCACCAAAGCTAGCGA--TTTTTTATTTTTCTTCTATTCTTTTTCCTCCTGATTA
TTAGATTAGACAGATGATGCTGTGTGC--AAGAGCGATTGTACCACCACC---ACTACTATTCTTTACGCGATAAGAATT
GCGGTTGATTTGATTGACGGAGATTTGCGCCCAAA-----------TTTTGCGATCTGATTAAGAGTTGATTTTTGCTTG
CCCACTTGGATGCAACTTTATGGATATCTTGCGTGCAAGTGTAACCCGAGAGCATTTGCAGCAACTTTG-----------
-------------------------TGAATTGTTTAGTGGTGGGG----TTTGAGATGTTC-------------------
-CATTCA-------------------TGTTTCCTTTGCTCCCTCCCTCCCT----GCTGTTTCTTCTGTACTATTTTTTA
ATTTTATTTGCAAGGGTTTCTTCTGTATTCAAACTGGACTGAAGAT---TCCTCTTTGCAAACACTGCACTGCTACGGTC
AGTA---AGATTAATACCTATGGGCCCACCAATTTGAAGAAGATGGTGGATCACGTTCTGGGTTTGTGGTTCGTGGATTT
TGATGAGTTCGATGGCGTGTTCGCGGATAACATGTGGGTGATATATCAGCGTTGTACT-GCGTCGAGCTCGGGTGAGAAG
GTGATTTGTCATTTTTATTCATTGATGGCTTCTCTGGTTGTGCCGGAGTTAGGTGACAAATGTTGCTGACAAGCTCAAAA
GATTCTTCATTGTAATTTTCTTTCTTGACTACTGTTT--TTTTTTTAAGTTTAGCGTTCTGCTATCTTTACAGTATT---
-----AATATTTACTTGACTTGTACTATATTCTTCGGGATATAAAAGGACACGTATATCACCATAAAAAGAACACTACTA
CACTGCTACAGTCAGTAACGAGATAAATACCTATTGGCCCACCAATTTGAACACCGTTTGAAATAAATATTACTTCCTCC
AAACCACATTACTTATCACTGATTTAGTTGTAG-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS---S----S-----------------S--SSSS-SS---------------S-SSSS--------------------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-------------
---------------S----------------------------------------SSSSS-----------------S-
---S------------------------------------------------------S----S----------------
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-----------------S--------------------------------------------------------------
--------------S-------------S-S----------------------------------------SSSS-----
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--------------------------------------------------S------SS-----------S--S------
---------------------------------S----S----SSS----------SSSS--------------------
---------SS---SSS-------S--S-----------S-------S---------------S-S----S---SS-SS-
SS-----------S--S----S-SS-------------------------------------------------------
----------S--------------------------S------------------------------------------
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------------------------------------------S--------------------------------S----
---------S----------------------------------------------------------------------
------------------------------------S----S-------------S------------------------
----S---------------------------------S------------S----------S---------S-------
-------------------------------------------------S--------------------S---------
---------------------------S-------------S---SS---------------------------------
---------------------------------S--------------S-SSS---------------------------
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------------------------S-----------S-------------------S---------------------S-
------------------------------------S-S----S-SSSS------------SSSSSSSSSSSSSSSSSSS
S-------------------------SS------------------------------S----------SS---S-----
---------------S---------------S----------S-S-SSS--S-S------------------------S-
-----------------S-----------------------------------S--------------S---S-S-----
---S-----SS--------------------------S---S---------S----SSS-----------------S---
---------SS---------S------SSS---------S------------S----S-------S--------------
-----------S-------------------S-----SS----S-S----SS--------S----S--------S--SSS
SSSSS-------------S-----S----------SS---------S----S----SSSSSS-------S----------
S---------------------------------------------------S------------------S--S---S-
-----------------S----------S----S
>forward_319
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-----------------------------------------------------------ACGATCCGATCCAACCCAAC-
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>reverse_1794
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---------------------------------CCGATTGTACCACCAGCACT---------------------------
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