>input_sequence_75201
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-----------------------------------------------CTATAAGTACGGGCCCTTCGGCGAGCAGCATCT
GCAAACAAACAAAGCTCGAAGC-----CCCCAGCTAGC------------------------------------------
--------------------TAC---------------------AGCCCACCCACGTT-----ACGATGGCGTCCTTCGC
CAGAGCTGCCCGTTTCATGGTGCTCCTGCAGATCGCGCTCTTCGCCGTC---TCCGCGGTGATCATGAGCAGCTCCGTCT
GCTACGGAGCCG---GGATCAGTCGTGAGTGCT----TCCGAACTGCTCATTTCATCCTCTTCGTCGTCATCTC-----C
TCCTTCAGTTATAGTACTCCTCTGC---------------------------------AGCGTCCTGAAATCGAGTAATT
ACTTGTAACTGATGAATCTC--CATGGACGCTCCTGTTTTCCTTCCAGCTGGTGCTCTGGACCCTAGCCGCCGCCCCATA
TGCAGAGGCAGGCCGTGCGGACAGCCTGGCCTACCGTACGGCGG---CCGTCCTCGGCCCTACCCTTACCGTCCGCAGCC
CGGCCCTGGAGCCCCTCCGCCGTACAATGGAGGGATTGGACGACCATGAT------------------------------
-----------------------------CATAGCA-----GTACAAGTTGCTGCAACAACCTTACTGAACC----GGGA
GTGTAATATCCGGTCGTACGAATAA-CTCCCGTTTATTACTGCGA-----------------------------------
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>chr7B_1_TraesCS7B01G259400
AGCCGCGAGCCGCTGGACCAACGCCGAGCCTGGGCGATGGTCGGGCGTGTTTTTGTCTGCGATCCGCCGACGAAAATATC
CGAGCGGCTAGAGGCGGAGTCAATACCTGCATGCTGCGCAGAGGCGTTGTCGGGGTTGTTCGGTCCGGTACCCGGCAAAT
TCATGGCAAGGCGCAGCCGCCGGCGACCGAATGCGCCAAATCCAGTGGCGGCGGCGGTTGCCGCAGATCTACCGGTTGTG
CGCCGGTGACGGGGCAAAAGAGGCACAAATCCGATGGTCGTGCTTTGGGCGGCCGGGCTGAAGACCGAGGAGGCGGCTGG
GAAATGGGCGACGGCGGCTATGGGGGAGGGGAGGGAAGGGGAAGAGAAAAAGGAACGTTTGTGTCGCTGATGGGCGGGCC
GGGGGAGAACAAGGGCACACATCCCGCCCGTCCGTGCGCTATCCGTTTCGATGCAAACGCGGCTCAAATTTGTGTCGGAA
ATGAGTCAGCGAATAAAAATTGACGTTTATCCGTTTGCTCACATGCATTGAGTCGCAATTTGTGTCCGTTTATTCCTCAT
TGGATGCGTCCCGACCATCTAAGGTCGTGCATTGGAGTTGGTCAGTAACATTGGTTTCATGCGTGACAACGCGAGGCGAG
GGAAACCCTACGTATAGCTTTTCCTTGGTTGCAAGACCGCAAGACGACCCGAGAGTTGGGTCGTCGGTCCTCTCTGCCGG
TCGTGCACGGCCAAGTTATCAACTTATCATTACTCACCACTCGCTAGCCTTGACTAAACCGAGAAATTTGAGCAAATAGA
TTCAC-CCGTGTGTGCCCACCAAAAA------TAGTGTGATTATCCTTATCGGAAAATTGCACTCCTTTTTTTAGGATGC
GAACTGTTAGCTGCCACTGCCAAAGCTTGATCTCTCGAGGTAGAATATGCTTGAGAAAAGTATACAAGGAAATTAATGTG
CCAAGGCGATCTTTCTCTTTGCCATAGGAGGAGGGGTCGATCGACATCTATAAGTACGGGCCCTTCGGCGAGCAGCATCT
GCAAACAAACAAAGCTCGAAGC-----CCCCAGCTAGC------------------------------------------
--------------------TAC---------------------AGCCCACCCACGTT-----ACGATGGCGTCCTTCGC
CAGAGCTGCCCGTTTCATGGTGCTCCTGCAGATCGCGCTCTTCGCCGTC---TCCGCGGTGATCATGAGCAGCTCCGTCT
GCTACGGAGCCG---GGATCAGTCGTGAGTGCT----TCCGAACTGCTCATTTCATCCTCTTCGTCGTCATCTC-----C
TCCTTCAGTTATAGTACTCCTCTGC---------------------------------AGCGTCCTGAAATCGAGTAATT
ACTTGTAACTGATGAATCTC--CATGGACGCTCCTGTTTTCCTTCCAGCTGGTGCTCTGGACCCTAGCCGCCGCCCCATA
TGCAGAGGCAGGCCGTGCGGACAGCCTGGCCTACCGTACGGCGG---CCGTCCTCGGCCCTACCCTTACCGTCCGCAGCC
CGGCCCTGGAGCCCCTCCGCCGTACAATGGAGGGATTGGACGACCATGAT------------------------------
-----------------------------CATAGCA-----GTACAAGTTGCTGCAACAACCTTACTGAACC----GGGA
GTGTAATATCCGGTCGTACGAATAA-CTCCCGTTTATTACTGCGAATAAAACTGCAAATCTGCCCCCCATATGTGAATGG
GTGTGTGAACGTGAAAGTTCGGTTTCGAATTTATATATACTACTCCCTCCATTCCAAAATAAGTGTCTCAAACTTAGTAC
AATTTTGTACTAGAGTTAGTATAAAGTTGAGACACTTATTTTTAGGAGGAGGAAGTACTAAGGCTGGCCATAGTGGGGGT
AACATAATTAGTATCATTTATTTGGGATTCACAAACATGCTTATGTGACAGATAATTAAAGAAAAGAGATGGTTATAGTA
ACATAGGTAGATGTAACATATTAAATGTGATGCTACTATGTGTCATGCATGGCGATAAATGAGACCACCTATGATATTAA
TCTAAGATACTATGCATGTTACTAGTCTAAGTTACTCCCCACTATGACCAGCCTAATAAAGATGGGTAGTCTAAATGTAA
GTGCA---AGCGTTAGACTAGCCACAATGGGTAGTAACATACACTAGTAACATAAACATATCCCTAGACTATATTACTAC
GTTCATTGTGGGTAGTAACATAAGTATGGTAACATGCAAAGCTTCATTTATTAGGTTATAGACTCATATTTCATTGGGAC
ATGTGATGTTACAATAACTAGCTAAGTTACTATAACTATCTCTCTCCTCATTAACTCACTGCCACATAAGCAAATTTGCT
GAGTTGGACTCAAATTTACTGCTGAAGTTACTCCCACTGCGGCTAGTCTTATGTGTTTGCAATCTGGATTCAG--T-TAC
AAGGCTGCCTCGTGCTATTTTACTCTAGCCAACAAGGTGGGCACATGG----CTGCAACTGTACGCG------TCCCACT
CGATCCAAGTACCCTTCCTTGTGCTTATAGTACCACGCCCCA----TCCATGTCATGTTCCCTTCCCCAAATCCCTTGTC
CAAATACAGTACTTTACAGTGTAAAATAATTTGGACGGTAAATTCTCTCGACAACACAACATGT--------AGGTTTAC
TTCTCCGAAACTCGAGAGAAGAAGCCAGCAGAA
>chrUn_608
ACAGTGGTTC----------------------------------------------------------------------
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---------------------------------------------------------CATGCGTGACAACGCTAGGCGAG
TGAAGCCCTACGTATAGATTTTCCTTCGTGGCAAGACCGCAAGACGACCCGAGAGTCGAGTCGTCGGTTCTCTCTGCCGG
TCGTGCACGGCCAAGTTG--------TCATCACTCACCACTCACCAGCCTTGACTAAACCGAGAAATTTGAGCAAATCGA
TTCAC-GTGTGTGTGCCCACCAAAAA-------AGTGTGATTATCCTTGGCGGAAAATCACACCA-------------GC
GCACTGGCAGCTGCCACCGCCAAAGCTTGATCTCTCGAGGTCGAATATGCTTGAGAAAAGTAT--AAGGAAATTAATGGG
CCAAGGCGACCTTTCTCTTTGCCATG---GGAGGGGTCGATCGACATCTATAAATAGCGG-CCTTCGGCGCGCAGCATCT
GCAAACAAACAACACAACTCCTCCAAGCCCCAACTAGT------------------------------------------
--------------------TAC---------------------AACCCAGCCACATCGATTCACGATGGCGTCCTTGGC
CAGAGCCGCCCGTTTGATGGTGCTCCTGCAGATCGCGCTGTTCGTCGTCGTCTCCGCGGTGATCATGAGCAGCTCCGTCT
GCCACGGAGCCG---GGATCGGTCGTGAGTGCT----TCCGAACTGCTCATTTCATCCTCTTCGTCGTCGTCTCATCTAC
TCCTTCAGTTATA---CTCCTCTGC---------------------------------GGCGTCCTGAAAGCGGGTAATT
ACTTGTAACTGATGAATCTC--CATGGACGCTCGTGTTTTCCTTCCAGCTGGTGCTCTGGACCCTAGCCGCCGCCCCATA
TGCGGAGGCAGACCGTGCGGACAGCCTGGCCTGCCGTACGGCGG---CCGTCCTCGGCCCTACCCTTACCGTCCGCAGCC
CGGCCCCGGAGCCCCTCCGCCGTACAATGGAGGGATTGGACGACCGTGAT------------------------------
-----------------------------CATAGCAGTACTGTACAAGTTGCTGCAACAACCTTACTGAACC----GGGA
GTGTAATATCCGGTCGTAGGAATAA-CTCCCGTTTATTACTGCGAATAAAACTGCAAGTCTGGCTCCCATATATTAATGG
GTGTGTGAACGTGAAAGTTCGGTTCCAAATTACTATCACTTCCTCTGTTCGCTTTTATAAGTCGTTTCAGACAACTGAAA
ATGAGCTACTTTGCACTCTGTCTAAAATGTCCTCAAGACCTTATAAAAATGAACAGAGGAA-------------------
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----------------------------------------------------GTAATAAAGATGAATAGTCTAAGTGTAA
GTGTA---AGTGCAAGTGT-------------------------------------------------------------
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------------------------------------------------TATGT--TTTGCAATCTGGATTCAG--TCTAC
AAGGCTGCCTCGTGCTATTTTACTCTAGGCAACATGGTGGGCACATGG----CTGCAGCTGTACGC-------TCCCACT
CGATCCAAGTACCCTTCCTTGTGCTTATA---CCACGCCCCATC----CATGTCATGTTTCCTTCCCCAAATCCCTTGTC
CAAATAA-----TTTACAGTGTAAAATAAATTGGACGGTAATTCT-----------------------------------
---------------------------------
>chr7A_628
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-------------------------------------------------------------------AACGCGAGGCGAG
TGAAACCCTACTTATAGCTTTTCCTTCGTGGCAAGACTGCAAGACGACCCGAGAGTCGAGTCGTCGGTTCTCTGTGCCGG
TCGTGCACGGCCAGGTTG--------TCATCACTCACCACTCACCAGCCTTGACTAAACCGAGAAATTTGAGCAAATCGA
TTCACCGTCTGTGTGCCCACCAAAACCAAAAGTAGTGCGATTATCCTTGCCGGAAAATCACACCA-------------GC
GCACTGGCAGCTGCCGCCACC-AAGCTTGATCTCTCGAGCTCGAATATGCCTGAGAAAA-TAT--AAGGAAATTAATGGG
CCAAGGCAATCTTCCTCTTTGTCATG---GGAGGGGTCGATCGACATCTATAAATAGCAG-CCTTCGGCCAGCAGCATCT
ACAAACAAACACAGCTTCAATC-----ATCTAACTAATTACAGTATAGTCCCTACTAAAGTTATTAGAAAGTTGAGTCAC
TTATTTTGAAATGAAGGAAGTAC---------------------AACCCAGTCACATT-----ACGATGGCGTCCTTGGC
CAGAGCTGGCCGTTTCATGGTGCTCCTGCAGATCGCGCTGTTCGTCGTG---TCCGCGGTGATCATGAGCGGCTCCGTCT
GCCACGAAGTCG---GGATCGGTCGTGAGTGCTTCCATCCAAACTGCTCATTTCATCCTCGTTGTCGTCGTCTT-----C
TCCTTCAGTTATACTACTCTTCTGC---------------------------------AGTGTCCTGAAATCGAGTAATT
ATATGTACCTGATGAATCTT--TATGGACACTCGTGTTTTCCTTCCAGCCGATGCTCTCGACCCTAGCCGCCGCCCTATA
TGCGGAGGCAGACCATGCGGACAGCGTGGCCTACCGTACGGCGG-----------------------------------C
CGGCCCTGGAGCCCCTCCGCCGTACGATGGAGGGATTGGGCGACCATGAT------------------------------
-----------------------------CATAGCA-----GCACAAGTTGCTACAACAACCTTACTGAACCAGCCGGGA
GTGTGATATCCGGTCGTATGAATAAACTCCCGTTTATTACTGCAAATAAAACTGCGAGTCTTGCCCCCATATACGAATGG
GTGTGTGAACGTGAAAGTTTGGTTCCGAATTATA-CT-------------------------------------------
------------------------------------------------------------A-------------------
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----------------------------------------------------CTGATAAAGATGGATA------------
GTGTAGTAAGTGCAATTGT-------------------------------------------------------------
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------------------------------------------------TTATGTGTTTGCAGTCTGGACTCGG--TCTAC
AAGGCTGCCTCGTGCTATTTTACTCTAGGCAACAAGGTGGGCACATACATGCCTGCAACTGTATGCGTCCCAATCCCAAT
CGATCCAAGTA-CCTTCCTTGTGCTTATA---CCACGCCCCTTC----CATGTCA-------------------------
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>chr7D_953
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-------------------------------------------------------------------------------G
CCAAGGCGATCTTTCTCTTTGCCATA---GGGG-------TCGACATCTATAAATACGAGCCCTTGGGCGAGCAGCTTCC
GCAAAAAA-CACAGCTCGAAGC-----ACCGAACTAGC------------------------------------------
--------------------TAGTCACCGCTCACAACACCAGTAAGCCAAGCCACGTT-----ACGATGGCGTCCTTCGC
CGGAGCTGCCCGTTTGATGGCGCTCCTCCAGATCGCGCTGT---TCGTCGTCTCCGCGGTGATCATGAGCAGCTCCGTCT
GCCATGCAGTCGGCGGCATCCGCGGTTAGCGCC----TCCAAACTGTTCATTTCATCCTCTTCGTCGTCATCTC-----C
TCCTTGAAATATA---CTCACTCTAGTAGTGGATGCTTGTGTTTCAGAGTATTCTATAAACATTCTGAAGCAGACAAGTT
ACCACTACTACAACTGAATAATCATGGATGCTTGTGTTTTCCTTCCAGTTCGTCCTCTGGACCCTAACCATCCCGTGTGC
CA---------------CGGACAGTGCGCACCCGGCGGTGGACCCTACCGTCCGCAGCCATACCCCCACCGTCCGCGGG-
----------GCACCTCCGCCGTACAATGGAGGGATCGGACGACCATGATGCATGCCCTCCGCTGTACAATGGAGGGATC
GGACGACCATGATGCATGCCTTCCTCCAGCATAGCA-----GTACAAGCTGCTGCAACAACCTTATACTAAGCCTAAGTG
TAGTAATATCCGATCATACGAATAA-CTTCCGTCTTGTACTCCGAAAAACACAGCAAGTCTGGCCCCCAT--GTTAATGG
GTATGTGAACCTGAAAGTTCGGTTCAGAACTACTCCT-------------------------------------------
------------------------------------------------------------A-------------------
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----------------------------------------------------GTAATAAAGATGGATA------------
GTGTA---AGTGCAAGTGT-------------------------------------------------------------
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------------------------------------------------TATGT--TTTGCAATCTGGATTTCAGTT-TAC
AAGGCTGCCTCGTGCTATTTTACTCTAGGCAACAAGGTAGC-----ACATGCCTGCAACTGTAGGTGG------CCCACT
CGATCCAAGTACCCTTCCTTGTGCTTGTA---CCACGTCCCTTCATTCCATGCCACGTTCCCTTCCCCAAATCCATTGTC
CAAATAA-----TTTATTGTGTGGAATAAACTGGACGGCAAATTCTCTCAACACCACAAAACATACAGATACAGGTTTAC
TTCTCTAAAACTCGAGAGAAGAAGCCATCAGAA
>SNPs
-SSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------
S-------------------------S--S--------------------------S-S---------S-----------
-----------------SSSSSSSSS----S-----------S-S--------------------------------S--
------SS----------------------------------------SS--------SS---SSSSSSSSSSSSSSS--
-S----SS---------S-----------------------S---------------------SS-------------S-
--------------------------SSS------------------------S--------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------S----S-----------------------------------
--S-----------------S-----------------------------------------------------------
-------------S------------------------------------------------------------------
---------------------------------S----------------------------------------------
---S-------S--------------------------------------------------------------------
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---------------------------------------------------------S----S-----------------
------------------------S------SS---SSSS-S---SS-S-SS-SSS-S-SSSSSS-SSSS-SSSSS-S-S
-SSSSSSSSS-S-SSS-SSSSSS--SS--SSSSSSSS-SS--SSSS-SSS-S-SSS-SS--SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--------S-----
---S------S-SS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
----------------------------S---------------------------------------------------
-----------------------------SSS------------------------------------------------
------SSSSSS-----------------S-------------------S---S-----S-SS-----------------
-----SS--------------------S-----
>forward_284
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------------------------ACAAATCCGATGGTCGTGCT------------------------------------
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>reverse_1978
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---------------------------------------------------------CTAAGGCTGGCCATAGTGGG---
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