>input_sequence_75178
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------------------ATGGGGAACGCGTACGGCAACGGCGGCTCGTCGACGGGCCACCTGCGGGCGCCGGAGCTGCC
GCTGCACCTGTGCTTCTTCCTGCTCGTGCTGTTCGTCTTCCTCGGCTTCTCCTGGTACATGAGCTACGAGTCGGTGGCGG
AGACCTTCGCCGACCAGGGCAAGCTCCTGCTCATGGTGTCGCCGCTCGCGCTGCTCCTCGCGGTGCGGCTGCTGTCGGGC
GGCGACGGCGACGGGCGGCGCGTCGACCAGCTGATGTCCATGTCGATGCCGGAGAGGGACTCCATCCACCGCGCCGGGGG
GTCGCCGTGGGGCGTCGGGCTCCTGCTCGTGCTGCTCATCGTCATGGTCTCCTACCAATCCAACTTCCGGGAGAAGTGGT
TCGCGCTCTAGT--------CATCGGGTGACGATTGATGGATATCGATCTCCATCGGAACCGGGATCGGGATCGGGATGT
CGCGGAGCATGCTTTTTCCATTAGCAAATGTCAAGAATCATGTGTACTACGCAGGTAACCCGAGACATATATGTCGTCGC
GCGAGAACCTTGTAAAGATTTGCTGATTATTGGAATGGAAACAGAACAAA------------------------------
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>chr5A_1_TraesCS5A01G231600
AGCCTTTGCGTTATTCTTCGTCATGAATGAGTCTTGGCCTGCTCTATCTGCGTGGGCTGAGTTTACTCTGAGAAGATG--
-----------CCGGTTCCTCTGATTTTCATCTCCTTGAAACGAATCCCCTCCCAAAAAAAATCTCCCTGAAACGAATCA
GCAGTTATGCACCATCCCTC------------------------------------------------------------
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-----------------------------------------------AAAAAAAAAACAATGCAGCAGCACTCGCAAGCA
TAGCTTCAGTCGATCAGATCATGTCCGAAACACAAGTGCAAAAAAGGGATGCGACGAGAGATAACTTGCATGCCACACGT
GAGCATCACGCAGGGACCAGGACAGTGGTCGATCCGTACGTACGTGTTGCCCGTATAGTAATACCAAATACAAATACTAT
AGCGCTGCAGTGGACTGTCCTAGATCTTGTTATCTTTCGCCATGGCCAGTGATATCATACACACGAACACGA---CTAGA
AGACACACCTGCCGTGTTGCATCCACTTAAGATGGGCTTTCTTAACCACC-AACGACGCGGACGCCGCAGATCTCGCCAG
AGCCGAAGGGGACACCGGCTCAGATAACAAATGTGCAGATCCCGTCGACGCTGCTGCACCGGCCAGCGCACCCTCCGCCC
CCACGGCGCACGCTCCCCCCACTGCGCCCACCGTCACCGACCGGTGGCCCCCGCGCTGCACGGGCGCGCTTTACTTAGCC
CCGACGCGCCGGGGATCGGGCTAAGCAAAGCGCTCGCGCCGCGGAGCCCACGTGCGTGCGTGCGTGCGTGCCGACATGCC
GTGTCAGCCGCCCCACGGCCGGCCGGCCCGCCGGAACGTGCTCCGCGCCGGGGCGGCCGCTCCGATTGGCCGGCGCGCTC
GCCACGTGTCGCCCCGGGCTCGTGTATAAATAAGCGCCCGCTCGATCGTCCACTCCCCAACTCTCTCCATCGGTGGCGAC
CGTCGAATC--------------CCTGAAAAACCACCTGCAAAATCATCACCTCGGTTCCATCGATCAAGAAGCCGTGGT
AGGCGAGGCCAGTGACCTATGGGGAACGCGTACGGCAACGGCGGCTCGTCGACGGGCCACCTGCGGGCGCCGGAGCTGCC
GCTGCACCTGTGCTTCTTCCTGCTCGTGCTGTTCGTCTTCCTCGGCTTCTCCTGGTACATGAGCTACGAGTCGGTGGCGG
AGACCTTCGCCGACCAGGGCAAGCTCCTGCTCATGGTGTCGCCGCTCGCGCTGCTCCTCGCGGTGCGGCTGCTGTCGGGC
GGCGACGGCGACGGGCGGCGCGTCGACCAGCTGATGTCCATGTCGATGCCGGAGAGGGACTCCATCCACCGCGCCGGGGG
GTCGCCGTGGGGCGTCGGGCTCCTGCTCGTGCTGCTCATCGTCATGGTCTCCTACCAATCCAACTTCCGGGAGAAGTGGT
TCGCGCTCTAGT--------CATCGGGTGACGATTGATGGATATCGATCTCCATCGGAACCGGGATCGGGATCGGGATGT
CGCGGAGCATGCTTTTTCCATTAGCAAATGTCAAGAATCATGTGTACTACGCAGGTAACCCGAGACATATATGTCGTCGC
GCGAGAACCTTGTAAAGATTTGCTGATTATTGGAATGGAAACAGAACAAATGTCTTGTTTCTTCTTTTCATCCTGTCGTT
CAAATTACTCGTCGTGATTTAATTTAAATTGAGTGAATCTACACTCCAAAATACATCTATATATATTCGCGTATGTGGTT
CAATGATTGTGAATCACAAGTGTTCAATGATGCGTATATACTATAGAAAGTGGTGTTCTAATCCCGAGCTCACATGAACT
CCGGTGAACAGCAAAATCAAAAAAAAAATGGCAAGAAATTTCAAACATCCCTAAAAAAATTGTGTGAAACATTGACAAAT
GTTCAATAGCATGCAAAATTTCAACACCAGATGACATTTGTGGAAAATCTAGCAAAAAAAACCTAAAGCGATGCTCCAAA
ATGTGAGCATCGATTTTGTTTTTTGTTTTTGCCAGATTTTCTATGAATGTCATTTGGTGTTGAAATTTTGTAAGCCATTT
AAACATTTGTCAATGTTTCAGACAAAAGAATGGAATTTTTTGAAACCGTCCGATGAACTCATTCAACGTTGTCAAGTGTT
CAGTCATTCCACCGCCGCTGCTCTGCAGCCTTTTTACCACTCCACCTTGAGCGTCCTGGCCGATCCAACACTAAACATGT
TGTTGCTATGAAGAACTACTTGGGCGCCCTCTAATTCACAGATGCGGCATAGCTTCGATCGCTAGTAAGATGAGCACATC
AAGCATTTTAATTGGCTGTGCACAATGATGTTTTTTAAAGAAGTTTAATTACCTTGAAGGAGCAAAACCTAGTGCTATGT
TAGGAAGCAGTCGAGGGAGGTTTAGTCGCAAGCAATAGCCAAGCGAGTCGCCTCGGTACCCTCTCCAAACTACTTTTCCT
CAATGTTAGTCCGAGACGAACTAGGCTCATCGAACATGACCATGAAGCTCCCCCAAACGAGACATGAAACGAGACAAAAA
GCTACACTTGTGAAAAGAGAGCACATAGCAAATCAAAATCAGATGCCCGTATGACCTTGTCCATGAGGCTCAGGTCAAAA
AGCTCGATCA
>chr5B_1
AGCCTTTGCGTTATTCTACGTCATGAATGAGTCTTGGCCTGTTCTGTCTGCGTGGGCTTAGTTCTCTCCGAGAAGATGGC
CCGTTCTCCTGCCGGTTCCTCTCATTTTCATCTCCCTGAAACGAATCCCCTA--AAAAAAAAACTCCTTGAAACGAATCA
GTAGTGCAGCACCATCCCT-------------------------------------------------------------
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---------------------------------------------CAAAAAAAAAAACAGTGGAGCAGCACTCGCAAGCA
CCCCTTCAGTCGATCAGATCATGTCCGAAGCATAAGTGCAAAAAAGGGATGCGACGAGAGATAACTTGC----CACACGT
GACCATCACGCAGGGAGCAGGACAGTGGTCGATCCGTACGTACGTGTTGCCCGTAGTAATAATAAAT----AAATACTAT
AGCTCTGCAGTGGACTGTCCTAGATCTTGTTATCTTTCGCCATGGCCAGTGATATGATACACAGGAACACGACTGCTAGA
AGACATACCTGCTGTGTTGTATCCACTTAAGATGGGCTTTCTTAACCACT-AACGACGCAGAGGCCGCAGATCTTGGCAG
AGCTCAAGGGGACACCGGCTCAGATAACAAATGTGCAGATCCCGTCGAC---GCTGCACCGGCCAGCGCACCCTCCGCCC
C-ACGGCGCACGCTCCCCCCACTGCGCCAACCGTCACCGGCCGGTGGCCCCTGTGCTGCACGGGCGCGCTTTACTTAGCC
CCGACGCGCCGGGGATCGGGCTAAGCAAAGCGCTCGCGTCGCGGAGCCCACGTGCGTGCGTGC--------CGACATGCC
GCGTCAGCCGCTCCAGGGCCGGCCGGTCCGCCGGAACGTGCTCCGTGCCGGGGCGGCTGCTCCGATTGGCCGGCGCGCTC
GCCACGTGTCGCCCCGGGTTCGTCTATAAATAAGCGCCCGCTCGGTCGTCCACTCTCCAACTCTCTCCATCGTCGAATCC
CAAAGCTTCCGCCTCTCTCAAAACCTCAAAAACCACCTG-CAGATCATCCCCTCAGTTCTATCGATCAAGAAGCCGTAGT
AGGTGAGGCCAGTGACCTATGGGGAACTCGTACAGCAACGGCGGCTCGTCGTCGGGGCACCTGCAGGCGCCGGAGCTGCC
GCTGCACCTCTGCTTCTTCCTACTCGTGCTGTTCGTCTTCCTCGGCTTCTCCTGGTACATGAGCTACGAGTCAGTGGCGG
AGACCTTCGCCGACCAGGGCAAGCTCCTGCTCATGGTGTCCCCGCTCGCGCTGCTCCTCGCGGTGCGGCTGCTGTCGGGA
GGCGACGGCGACGGGCGGCGCGTCGACCAGCTGATGTCCATGTCGATGCCGGAGAGGGACTCCATCCACCGCGCCGGGGG
GTCGCCGTGGGGCGTCGGGCTCCTGCTCGTGCTGCTCATCGTCATGGTCTCCTACCAGTCCAACTTCCGGGAGAGGTGGT
TCGCACTCTAGTGTCATAGTCACCGGATGATGACT----------GATTTCCATCGGAACCGAGATCGGGA---------
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>chr5D_1
AGCCTTTGCGTTATTCTACGTCATGAATGAGTCTTGGCCTGTTCTATCTGCGTGGGCTTAATTTTCTCCGAGAAGATGGC
CCGTTGTCCTGCCGGTTCCTCTGATTTTCATCTCCTTGAAACGAATCCCCTCCAGAAAAAATTCTCCTTGAAACGAATCA
GCAGTGCAGGCGTGCAGTACCACCCCTCAAAAAACAAAGGTAAATGTTTGGGAACGGCGCACCGGCCGAGTTTGGGCTGG
TCGTTCGCTGCGTCGCCACGCGTCATCACTGGCGCGTGCTACCTCCTCCGCGTCCGCACGTTTTCTTTGTGTGGCCCACG
TCTGTCCCTCCCCCTTCTTTTTCTCCTTCCTTCCTTATCCTCTTCCTCCCGTCATTCTCCTCTCCTCATTCTCTCTCTGT
TTCTCCCTGGTCTCGTTTTTCCTCCATGGATCTCTCCTCCTGTTGACCACCGGCCCCCGTTGCTACTAGGAACCGGACAT
GGCCGTGCACCCATCCCCTACCCCTCATCCACTATTGCTTTGTAATTCGATGAGAGAAGCCCTGTCCCTTTTTCCCCCAA
AACAGCCCCTAAATTTGTGACGGCGAGGGGAAGAACACGAGCGAGGTGCTGCTGTGGAGCTGGGGGTGCTTCTTCCACCT
CCTCTACGACTGCGGCTGGGCGGAGCTGGGACTAGCAGCGCCAGAAGCCGCAACCTCGTCGTGGGGAGCTGCAACCTCCT
GTCGACGGAGCATCAGGCCTCGCCGGCAACCACGATCACCATCGATTTTTGCTACAACCGGTGTCAAAATTTGCCACAAC
CGGTGTCAAAATTTGCGACGGCCACTGAGCAGCGAGCTGCAACGTCGAAGCTCACGGCCGCGGGATGCTGGGACTGCTAG
CACCAGAAGCTGCAACCGGCAACGCCGGGAGCTACAACCTCCTGTCGGCGGAGCATCAGGGCTCGCCGGCCACCACGGTC
ATCATCGGTTTTTGCTACAACCGGTGTCAAAATTTGCTACAACCGTTGTCGATTTTGCTACAGCCGGTGTATTTACATTT
TTGCCACATTGCACAAGCCAGCGTCTGGATTTTTTGCTACAACCGTTGTTCGATTTTGCTGGAACGGGCGCTCGTTTTTG
CTGGAACGGGTGACCGAGATGTTACAACGGTGAGATGTGATCGACGAGCTGCGGCATCAGGCATGAGCGGCGACGAGCAC
GGCGGTGAGCTATGGCCCTTGCCATCGGAGCTACAATCGTCGCCACCAGAGCTACAACCACGGGTGCCGATGTTACATGC
GTGGAGCTGGCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGTTGGTCGCGCTCGCTCATCCATGGCAGCGGCGCCCACTGCTCCTTTTTTCCGCTGTGCTCGCGAGA
TTCGTTTTTCTTTTTTAAGAAAGGGACTGCACGAGAGCCCAGTCTTCGAATTGAACGGTTGGGGCTCGACCGGCCCAAAC
AATTCGGCCGGTGCGCCGGCGCCTATAAGCGCCCAAAAACAAAAACAAATAAAAAAGCAGCGCAACAGCACTCGCAAGCA
TCCGTTCAGTCGATCAGATCATGTCCGAAACATAAGTGGAAAAAAGAGATGCGACGAGAGATAACATGC----CACACGT
GACCAACACGT----------ACAGTGGTCGATCCGTACGTACGTGTTGCCCGTAGTAATAAAAAAT----AAATACTAT
AGCTCTGCAGTGGACTGTCCTAGATCTTGTTATCTTTCGCCATGGCCAGTGATATGATACACAGGAACACGACTGCTAGA
AGACATACCTGCTGTGTTGCATCCACTTAAGATGGGCTTTCTTAACCACTTAACGACGCGGACGCCGCAGATCTTGCTCG
AGCCGGAGGGGACACCGGCTCAGATAACAAATGTGCAGATCCCGTCGAC---GCTGCACCGGCCAGCTCACCGTCCGCCC
C-ACGACGCACGCTCCCCCCACTGCGCCCACCGTCACCGACCGGTGGCCCCCGTGCTGCACGGGCGCGCTTTACTTAGCC
CCGACGCGCCGGGGATCGGGCTAAGCAAAGCGCTCGCGTCGCGGAGCCCACGTGCGTGCGTGC--------CGACATGCC
GTGTCAGCCGCTCCACGGCCGGCCGGTCCGCCGGAACGTGCTCCTTGCTGGGGCGGCTGCTCCGATTGGCCAGCCCGCTC
GCCACGTGTCGCCCCGGGTTCGTGTATAAATAAGCGCCCGCTCGATCGTCCACTCCCCAGCTCTCTCCATCGTTAGCGAC
CATCGAATC--------------TCTGAAAAACCACCTG-AAAATCATCACCTCGGTTCCATCGATCAAGAAGCCGTAGT
ACGTGAGGCCAGTGACCTATGGGGAACTCGTACAGCAACGGCGGCTCGTCGTCGGGCCACCTGCAGGCGCCGGAGCTGCC
GCTGCACCTCTGCTTCTTCCTCCTCGTGCTGTTCGTCTTCCTCGGCTTCTCCTGGTACATGAGCTACGAGTCGGTGGCGG
AGACCTTCGCCGACCAGGGCAAGCTCCTGCTCATGGTGTCCCCGCTCGCGCTGCTCCTCGCGGTGCGGCTGCTGTCGGGA
GGCGACGGCGACGGGCGGCGCGTCGACCAGCTGATGTCCATGTCGATGCCGGAGAGGGACTCCATCCACCGCGCCGGGGG
GTCGCCGTGGGGCGTCGGGCTCCTGCTCGTGCTGCTCATCGTCATGGTCTCCTACCAGTCCAACTTCCGGGAGAGGTGGT
TCGCACTCTAGTGTCATAGTCACCGGGTGATGACT----------GATTTCCATCGGAACCGAGATCGGGA---------
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>SNPs
-----------------S-----------------------S----------------S-----S---S-----------
-----------------------------------------------------S-------------S------------
-----SSS------------------------------------------------------------------------
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-----------------------------------------------------------S--------------------
-SS-----------------------------S------------------------------------SSSS-------
--S-------------S--------------------------------------SSSSS-S-SS-SSSSS---------
---S---------------------------------------------------S-------S----------------
-----S------S------------------------------------S------------------------S-----
-------------------------------------------------SSS----------------------------
-S---------------------------------------------------S--------------------------
--------------------------------------S------------------------SSSSSSSS---------
-----------S--------------S------------------S-----------S----------------------
------------------S-----------------------------------------------------S-------
-S-------------------------------------S-------------------------------------S--
---S-----------------------S-----S-----------------S------------S---------------
---------S-----------S----------------------------------------------------------
----------------------------------------S--------------------------------------S
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---------------------------------------------------------S----------------S-----
----S-----------------S-------S--S-SSSSSSSSSS---S-------------S--------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_2056
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------------------------------------TCGCCATGGCCAGTGATATC------------------------
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>reverse_4014
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-------------AGGGAGGTTTAGTCGCAAGC-----------------------------------------------
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