>input_sequence_75168
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-------------------------------------------------------------------CTATATATAGACC
TGCTCGCAGCTTTAGCCAGCCACACCACTACAACAGCAGAAAGCATTCTACCACCAGACCGACCGCAC-AGTTGAAGTGA
GA--TCTGCGCTAAGGGTTCATCAGCAACCATGAAGAGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGGATCCTCTCACACGTGAACGGTAAGC--TGCTGATGCT---CAATCATTTCACCTCTTCCTAGACAAAGCTCGA
TCA-------TTCCGTGATGCCCAGAGGGA-GGGGAGGCTTCTCGTCTCGTCTTA----TAAGTGATA-TATTATCTGAT
TCTGATGCCGTCGGTGCC-TTTGCGTGCGTGCAGCCGACTATTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCGGG
GGTCGACGTCTGCGACGACGCCCACCCCCAGTGCCCCAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCGAGCCCTCACA
AGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCGATGGCACCTGCGGCGGGCCATGCAAGAAGCACTGATCCGTTCAG
GGCTTCAGGCTCAGACGAGGTGTGCCGCCTAAA-----------------------------------------------
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>chr1D_1_TraesCS1D01G266000
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATGCAAGTTTTGGTATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCA
ATTTAGTAGATGTTGGTGCACTTTTAGCTAGCATAGAGGCTAGACATGAGACTAGTGCATTTGTTGCTAGATTAGAGGCT
AGACATGAGACTAGACGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAGATCAAAAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGTAGTTATGGAAGTTGGATATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTCGTCTTACTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAAAA
TTAATGATGAAAAAAA-TTAAGGGCATGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCTG-CGCGTTG
GGCACACGGCCACCGCATCCTAAAAACGGTCCGGACACGACCCCATTGCCCTACCCAAACTGACAGAATCCGGACAAAAC
GGACGTCCGTTCGGGGTCACGCGGTGGAGCTGGCCTTGGTCTGGCAGGGTGAATCCTGGGCCGCCGAGTTCGAAATACTA
CTTTGTTTCTTTCCCGAGGCAGATCCGATCCACTGATCCCGAGTAGTACGAACACAATATCTGCTGTCGTGGCCTAAATC
AGTGTGCACGTGATCGTGTT-TGGTGGACATGAGTGGTGGTGTC-------CATGTCAAACAATCCACGCCGCCTATAAG
AAAA--TCCGGGAAAACGAGTCCAAGTTTCCATCCCAGCTGCTACTAATCAAACATCTTTATCCACCCAACTAACCAAAT
AATGGGCATAGCGATCGCAGCATCGCAGCCGAGGCCGCTTGCC---------------AATCGACGCCTATATATAGACC
TGCTCGCAGCTTTAGCCAGCCACACCACTACAACAGCAGAAAGCATTCTACCACCAGACCGACCGCAC-AGTTGAAGTGA
GA--TCTGCGCTAAGGGTTCATCAGCAACCATGAAGAGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGGATCCTCTCACACGTGAACGGTAAGC--TGCTGATGCT---CAATCATTTCACCTCTTCCTAGACAAAGCTCGA
TCA-------TTCCGTGATGCCCAGAGGGA-GGGGAGGCTTCTCGTCTCGTCTTA----TAAGTGATA-TATTATCTGAT
TCTGATGCCGTCGGTGCC-TTTGCGTGCGTGCAGCCGACTATTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCGGG
GGTCGACGTCTGCGACGACGCCCACCCCCAGTGCCCCAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCGAGCCCTCACA
AGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCGATGGCACCTGCGGCGGGCCATGCAAGAAGCACTGATCCGTTCAG
GGCTTCAGGCTCAGACGAGGTGTGCCGCCTAAAAT------AAAGCTCAGATGAGATGAGCA--GTCATGGTGCCTATGC
TTGTGTGTGGGTCGTGCTATACGGCCAACAATATGTATACTGCTATCGTCGTGTCTTGGTCAATGTGTTTTCTCTCTCGA
GAAAGGC-TGGTGGTGCTTGTACTTGTTCACCTATTCTCCGTCAATAAACACATGTGATGATTGTACTTGTTCACCTATC
CGCCGTGAATAAACACATGTGATGATTGTGCTTGTACTCTTGTCTGTTATGTTT--------------------------
--------------TCACGTCTCATACGAGCTGATGGAATGCTCTTTGAAATTTACCTTTCTACTTTCGGCACAACAAAC
AACTGTCCGACGTACTACT-----------CTTTTACCATCTTTCGGCGGCAAGTCCCAACTTTCATGGCTGCCTTTTTT
TT------AACGTGGTGGCTGCCAAGTTGTTTGCAGAGTTTGCTAAATTGACTACATGAAATGTGTCTGCAGTCACGCGT
TTGTTAAATTTGCCTGCCTGTATAAAAAAGTATGGCTAAAAATTGAACTTGCTGTTTGCGAACCACCTGAAGTTGTTAGA
ACTTTATTATTCTCAAAACCTCAATTATCTTCTTCCTTTCGCCTTGATCATGAACAGTGAAAGGTTTCGTATTAATTAGA
TCTTATCTCAATTCATTC-GAAAGCATAACCAGGCTTTGGACTAAAGTTGGTTCAGCACTTCAGCATCACATAGTACTTG
CAAAAATGTAACAAAAAAACATACGAACCGGCTGATTTTTTTTTTTTACATTTTCTCTATGTAGTCTGAAATTTTCAAAA
ATCAACCTTTTAGGTTTCAAAAGTTCTGAAAAATAAGACAGACATCACTGTGATGTATACTTCATGTTTTTAAAGTTTTC
ATACTATAAGTCTATAATTTTG-TTATTTTATGTGTAGCTCACATCAAAACTTCGTCATGAACACTTGACAAAC------
----ATGTACTAGTATGCATCCCTATATGCGATGAAAACATGCAACAAGAAATTAACCCTAATAACTCATA
>chr1D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTTTTTTTAGCTTTGGTTGTGATCTTGGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATGTAAGTTTTGGTATTGGGAAAAAGAGTACATTGATATATTGATAGAGCGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCT
AGAGATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAG-TCAACAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATGAAAGTTGGACATCTTCTAA
AATGTATTCTTGTGGTTCTTATTTTCTTTGGTCTTGCTTTTCTAGTCAAAATTTGGTAATGTATTCTCCTGTATCAAAAA
TGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCCG-CGCGTTG
GGCGCACGGCCACCGCATCCCAGGACAGGTCCGGACACGACCCCATTACCCTACCCAAATGGACAGAATCCGGGCAAAAT
GAACGTCCGTTTGGGGTCGCGCGATGGAGTTGGCCT--------------------------------------------
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>chr2D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACATAAAATTTTATTGTGTAGCATGGATGCAAGTTTTGGTATTGGGAAGAAGAGTAGATCGATATATTGATAGAGCGTA
ATTTAGTAGATGTTCGTGCAATTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCT
AGACATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAGATCAACAACGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATGGAAGTTGGGTATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTGCTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTATCAAAAA
TGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCCG-CGCGTTG
GGCGCACGGCCACTGCATCCCAGAAACTGCCCGGACACGACCCCATTGCCCCACCCAAACGGACAGAATCCGGGCAAAAC
GGACGTCCGTTTGGGGTCGCGCGGTGGAGTTGGCCT--------------------------------------------
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-----------------------------------------------------------------------
>chr2D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTCTGTAGCATGGATGCAAGTTGTGGTATTGGGAAAAAGAGTACATCGATATATTGATAGAGTGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAAAGATGAGACTAGTGCACTTGTTGCTAGATTAAAGGCT
AGACATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAAGAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAGATCAACAATGATTGCATCGAGAAGGCACTAATCCAACTTACAGAAGCAGTTATGGAAGTTGGATATCTTTTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTACTTTTTTAGTCAAAATTTGGTGATGTATTCCCATGTACCACAAA
TGAATGATGAAATAAA-GTAAGGGCTTGCAAAGAAAAATATACGCGGACAGGATGCGGCCGGGATGCATCCG-CGCGTTG
GGCGCACGGCCACCGCATCCCAGAAACTGCCCGGACACGAACCCATTGCCCTACCCAAACGGACAGAATCCGGATAAAAC
GGACGTCCGTTTGAGGTCGCGCGGTGGAGTTGGCCT--------------------------------------------
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>chr3D_1
GGTGTTCATCAAGTGCTTAAACGGTGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTGGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATGCAAGTTTTGGTATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGAATAGAGGCT
AGACATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTACACTCGAAGAAGAAAGAAGCATGCAAGATCGAGCCTCC
TCCGCAGATCAACAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATGGAAGTTGGATATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTGCTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAAAA
TGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAGTGTACGCGGACAGGATGCGGCCGGGATGCGTCCG-CGCGTTG
GGCGCACGGCCACCGCATCCCAGAAACTGCCCGGACACGACCCCATTGCCCTACCCAAACGGACAAAATCCGGGCAAAAC
GGACATCCGTTTGGGGTCGTGCGGTGGAGTTGGTCT--------------------------------------------
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>chr5D_1
GGTGGTCATCAAGTGCTTAAACGATGGGGTATGTACTCTTTTTAGCTTCAGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATGCAAGTTTTGGTATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCT
AGACATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAGATAAACAATGAATGCATCGAGAAGGCACTAATTCAACTTACAGGAGCAGTTATGGAAGTTGGATATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTACTTTTCTAGTCAAAATTTTGTGATGTATTCCCATGTACCAAAAA
TGAATGATGAAAAAAAGTTAAGAGCTTGCAAAGAAAAGTGTATGCGGACAAGATGCGGCCGGGATGCGTCCG-CGTGTTG
GGCGCACGGCCACCGCATCCCAGAAACGGCCCGGACACGACCCCATTGCCCTACCCAAACGGACAGAATCCAGGCAGAAC
GAACGTCCGTTTGAGGTTGCGCGGTGGAGTTGGCCTT-------------------------------------------
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-----------------------------------------------------------------------
>chr5D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGAATGGATGCAAGTTTTGGTATTGGGAAGAAGAGTACATCAATATATTGATAGAGCGCA
ATTTAATAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCT
AGACATGAGACTAGATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGACTCC
TCCACAGATAAACAATGAATGCATCGAGAAGGCACTAATCCAACCTAGATGAGCAGTTATGAAAGTTGGATATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTACTTTTCTAGTCAAAATTTGGTGATGTATTTCCATGTACCAAATA
TGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAATGTACGCGGACAGGATGCGGCCCGGATGCGGTCG-CGCGTTG
GGCGCACGGCCACCGCATCTCAGAAACTGCCCGGACACGACCCCATTACCCTACCCAAACGGACAGAATTCGGGCAAAAC
GGACGTCTGTTTGGGGTCGCACGGTGGAG---------------------------------------------------
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>chr5D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTGGATTTAACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATACAAGTTTTGGTATTGGGAAGAAGAGTATATCGATATATTGATAGAGCGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCT
AGACATGAGACTAAATGCGAGGAAGCAACCTCTACTTCTTTAGACTCGAAGAAGAAAGAGGCATGCAAGATTGAGCCTCC
TACGCAGATCAACAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATGAAAGTTGGTTATCTTCTAA
AATGTATTCTTGTGGTTCTTGTTTTCTTTGGTCTTGCTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAAAA
TGAATGATGAAAAAAAGTTAAGGGCTTGCAAAGAAAAATGTACGTGGACAGGATGCGGCCGGGATGCGTCCG-CGCGTTG
GGCGCGCTGCCACCGCATCCCAGGACAGGCTCGGATACGACCCCATTGCCCTACCCAAGCGGACAGAATCTGGGTAAAAC
AGATGTTCGTTTGGGGTCGCGCGGTGGAGTTGGCCTT-------------------------------------------
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>chr4D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTCGTGCTCTTAGATTTGACTAGTTGTGCT
AACTT-AAATTTTATTGTGTAGCATGGTTGTAAGTTTTGGTATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGTT
AGACATGAGACTAGATGCAAGGAAGCAACCTCTACTTTTTTAGACTCAAAGAAGAAAGAAGCACGCAAGATCGAGCCTCC
TCCGCAGATCAACAATGAATGCATCGAGAAGGCACTAATCCAACTTACAGGAGCAGTTATGAAAGTTGGATATCTTCTAA
AATGTATTCTTGTGGTTTTTGTTTTCTTTGGTCTTGCTTTTCTAGTCAAAATTTGGTGATATATTCCCATGTACCAAAAA
TGAATGATGAAAAAAAGTTAAGGGCTTGCTAAGAAAAATGTACGCGGACAGGATGCGGCCGGGAAACGTCCGCCGCGTTG
GGCGCACGGCCACCGCATCCTAGAAACGGCCCGGACACGACCCCATTGCCCTACCCAAACGGACAGAATCCGGACAAAAC
GGACATCCATTTGGGGTCGCGCGGTGGAGTTGGCCT--------------------------------------------
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>chr4D_1
GGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCT
AACTTAAAATTTTATTGTGTAGCATGGATGCAAGTTTTGGTATTGAGAAGAAGAGTACATCGATATATTGATAGAGCGTA
ATTTAGTAGATGTTCGTGCACTTTTAGCTAGCATAGAGACTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGTCT
AGACACGAGACTAAATGCGAGGAAGCAACCTCTACTTTTTTAGAGTCAAAGAAGAAAGAAACACGCAAGATCGAGCCTCC
TCCACAGATAAACAATGAATGCATCAAGAAGGCACTAATCCAACTTACAGAAGCAGTTATGGAAGTTGGATATCTTCTAA
AATGTATTCTTATGGTTTTTGTTTTCTTTGATCTTACTTTTCTAGTCAAAATTCGGTGATGTATTCCTATGTACCAAAAA
TGAATGATGAAAAAAA-TTAAGGGCTTGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCCG-CGTGTTG
GGCGCACGGCAACCATATCCCAGAAACGACCCGGACACGACCGCATTGCCCTACCCAAACGGACAGAATCCGGATAAAAC
GGACGTTCGTTTGGGGTCGCGCGGTGGAGTTGGCCT--------------------------------------------
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>chr1B_755
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------------------------------------TCCCGAGTGGTATGAAAACAATCTCTGCTGTCGTGGCCTAAATC
AGTGTGCACGTGATCTGGTTTTGCTGGACATG---GGTGGTGTC-------CATGTCAAACAATCCACGCCGCCTATAA-
AAAA--CCCTGGAAAACGAGTCCAAGTTTCCAAGCCAGCTGCTAGTAGTCAAACATCTTTATCC-CCCAACTAACCAGAT
AATGGACATAGCGATCGCAGCATCGCAGCCGAGAAAGCTTGCCAATCAACTTTTACGAAATCGGCGCCTATATATAGAGC
TGCTCGCAGCTTTAGCCAGCCACACCACTACAACAGCAGAAAGCATTCTACCACTAGACCGACCGCACCAGGTGAAGTGG
GAGCTTTGCGCTAAGGGCTCATTAGCAACCATGAAGAGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGGATCCTCTCACACGTGAACGGTAAGC--TGCTGATGCT---CAATCATTTCACCTCTTCCTAAACAAAGCTCGA
TCA-------TTTCGTGATGCCCAGAGGGAAGGGGAGGGTTCTCGTCTCGTCTTA----TGAGTGACA-TATTATCTGAT
TCTGATGCCGTCGGTGTC-T-TGCGTGCGTGCAGCCGACTATTTCCCCAAGTGCTGCAACAATTGCAGGTCCTTCTCGGG
GGTCGACGTCTGCGACGACGCCCACCCCCAGTGCCCCAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCCAGCCCTCACA
AGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCGACGGCACCTGCGGCGGGCCATGCAAAAAGCACTGATCCGTTCAG
GGCTTCAGGCTCAGACGAGGTGTGCCGCCTAAAAT------AAAGCTCAGATGAGATGAGCA--GTCATGGTGCCTATGC
TTGTGTGTGGGTCGTGCTATACGGCCAACAGTATGTATAATGCTATCGTCGTGTCTTGGTCAATGTGTTTTCTCTCTCGA
GAAAGGC-TGGTGGTGCTAGTACTTGTTCACCTA---------------------------------------------C
CTCCGTGAATAAACACATGTGATGATTGTGTGTGCCTACTCAATAACATGAGAACCAGTTCTCTTGTCGAATATTGCATT
TATACTCTCCGATATGCAATCAATCGTTTATACT-------CTCTTTGAAA------TTTCTACTTTCGGCACAGCAAAC
AACGGTCCGACGTACTCTTTTGAGACTCTACTCTTACCATCTTTCGG-GGCAAGTCACAACTTTCATGGCTGCCTTTTTT
TTTTTTTGAACGTGGTGACTGCCAAGTAGTTTGCAGAGTTTGCTAAATTGACTACATGAAATGTGTCTGCAGTCACGCGT
TTGTTAAATTTGCCTGCCTGTATAAAAA-GTATGGCTAAAAATCGAAATTGCTGTTGGCGAACCACGTTAAGTTGTTAGA
ACTTTATTATTCTCAAAACTTCAATTATCTTGTTCCTTTGGCCTTGATCATGAACAGTGAAAGTTTT-GTATTAATTAGA
TCTTATCTCAATTTTTTTGTAAAGCATAACCAGGCTTTGGACTAAAGTTGGTTCAGCACTTCAGCATCACATAATACTTG
AAAAAAA-TAACAAAA-AACATACTTAGCAGCTGAGTTTTT---------TTTTCTCTATGTAGTCTGAAATTTTCAAAA
ATCAACTTTTTAGGTTTCAAAAATTCTGAAAAATAAGACAGACATCATTGGGATGTATACTTTATGTTTTCAAAGTTTT-
ATCCTAGAATTCTATAATTTTTTTTATTTTATGTGTACCTCACATCAGAACTTCACCATGAACACTTTACAAACATG---
-------TACTAGTATGCATCCCTATATGCGATGAAAACATGCAACAAGAAATTAG-CCAAACAACTCATA
>chr1A_762
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-------------------------------------------TAGTATGAAAACAATATCTGATGTC--GGCCTAAATC
AGTGTGCACGTTATCTGGTT-TGCTGGACATG---AGTGGTTGGTGTCCATG-----------TCCACGCCGCCTATAA-
AAAAAACCCGGGAAAACGAGTCCAAGTTTCCAAGCTAGCTGCTACTAGCCAAACATCTTTATGCCCCCAACTAACCAAAT
AATGCACGTGGCGATCGCAGCATCGCAGCCGAGGCCGCTTGCCAATCAAC--TTACGAAATCGACGCCTATATATAGAGC
TGCTCGCAGCTTTAGCCAGCCACACCACTACCACAG-----AGCATTCTACCACTAGACCGACCGCAC-AGGTGAAGTGA
GAGCTTTGCGCTAAGGGTTCATCAGCAACCATGAAGAGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGGATCCTCTCACACGTGAACGGTAAGC--TGCTGATGCT---CAATCACTTCACCTCTTCCTAAGCAAAGCTCGA
TCA-------TTTCGTGATGCCCCAGAGGGAGGGGAGGTCTCTCGTCTCGTCTTA----TCAGTGACA-TATTATCTGGT
TCTGATGCCGTCGGTGTC-T-TGCGTGCATGCAGCCGACTTCTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCCGG
GGTCGACGTCTGCGACGACGCCCACCCCCAGTGCCCCAAGGGCTGCTCGGCCTGCCGCGTGGTGACGCCCAGCCCTCACA
AGACGTTCCGGTGCGCCGACATGAAGAGCACCGTCGATGGCACCTGCGGCGGGCCATGCAAAAAGCACTGATCCGTTCAG
GGCTTCAGTCTCAGACGAGGGGTGCCGCCTAAAAT------AAAGCTCAGATGAGATGAGCA--GTCATGGCGCCTATGC
TTCTCTGTGGGTCGTGCTATACGGCCAACAATATGTATACTGCTATCGTCGTGTCTT-GTCAATGTGTTTCCTCTCTCGA
GAAAGG--TGGTGGTGCTTGTACTTGT------------------------------------------GTTCACCTATC
CTCCGTGAATAAACACATGTGATGATTGTGTGTGCCTACTC----------------------------AATATTGCATT
TATACTCTCCGATATCACGTCTCATACGAGCTGATGGAATGCTCTTTGAAATTTACCTTTCTACTTTCGGCACAGCAAAC
AACTGTCCGACGTACTACT-----------CTTTTACCATCATTCGGCGGCAAGTCACAACTTTCATGGCTGCCTTTTTT
TT------AACGTGGTGGCTGCCAAGTAGTTTGCAGAGTTTGCTAAATCGACTACACGAAATGTGTCTGCAGTCACGCGT
TTGTTAAATTTGCCTGCCTGTATAAAAA-GTATGGCTAAAAATCGAACTTGCTCTTGGCGAACCACCTTAAGTTGTAAGA
ACCTCATTATTCTCAAAACTTCAATTATCTTGTTCCTTTCGCCTTGATCATGAATAGTGAAAGGTTTCGTATTAATTAGA
TCTTATCTCAATTCTTTC-TAAAGCATAACCAGGCTTTGGACTAAAGTTGGTTCATCACCTCAGCATCACATAGTACTTG
AAAAAATGTAACAAAA-AGCATACGAACGGGCTGAATTTTTTTAA-TATATTTTCTCTATGTGGTCTGAAATTTTCGAAA
ATCAACCTTTTAGGTTTCAAAAATTCTGAAAAGTAAGACAAACATCATTGGGATGTATACTTCATGTTTTAAAAGTTTTC
ATACTAGAAGCCTATAATTTTA-TTATTTTATGCGTAGCGCACATCAAAACTTCATCATGAACACTTAACAAACATGAAG
TATCATGTACTAGTATGCATCCCTATATGCGATGAAAACATGCAACAAGACATTAACCCAAACAACTCATA
>chr1A_775
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--------------------------------------------------------ATATCTGCTGTCGTGGTCTAAATC
GGTGTGCACGTGATCTGATG-TGCTGGTCATG---AGTGATATATACAATGCATGTCAAACAATCCACGCCGCCTATAA-
AACAAAAAAAG--AAACGAGTCCAACTTTCCAAACC-------AGTAGTCAAACATCTTTATCCCCCCACCTAACCAAAT
AATAACGACCTGTAGCCTAGCAGCCA----TAGCAGGATTGTCAATCAAG--TTACGAAATCGACGCCTATATATAGAGC
TGCCCGCAGCTTTAGCCAGCCACACCACCACAACAACAGAGAGCATTCTACCACCGC----ACCGCAC-GAGTGAAGTGA
GAGCTTTGCACGAAAAGTTCATCAGCGACCATGAAGGGCACCAAGCTCGCGGCGATCCTCATCCTCCAGGCCGTCCTGGT
CATGGGAGTCCTCTCACACGTGAACGGTAAGCAGTGCTCATGCT---CAATCGTTCTACCTGTAGT----------TCGA
TCGATTTGGGCAG-----------------------------TCATGTCTTGTACGTAGTAAGTGATATTA---------
CCTGATGC---CGATGTC-T-TGCGTGCTTGCAGCCGACTATTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCCGG
GGTCGACGTCTGCGACGACGCCCACCCCAAGTGCCCCAAGGGCTGCTCGGCGTGCCGCGTGGTGTCGACGAGCCC---CG
AAATGTGGCGCTGCGCGGATATGAAATCCACCGTCGACGGCACCTGCGGTGGGCCCTGCAAGAAGTACTGATCGGCTCAT
GCCAGC--------ATGATATGTTCCGCCTAGAATGAAATAAAAGCTCAGACGAGATGAGCAGCGTCATCGTGCCTATGC
GTGTGTGTGTGGCCAACA-----------AATATGTATACCAGTAT-GCCGTGTCTTCGTCGCTGTGTTTTCTCTCTCGA
GAAAAAGTTGGTGTTGCTTGT-----------------------------------------------------------
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>chr1B_842
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---------------------------------------------------CATGTCAAACTATCCACGCCGCCTATAA-
AACAAAAAA-G--AAACGAGTCCAACTTTCCAAACC-------AGTAGTCAAACATCTTTATCTCCCCACCTAACCGAAT
AATAACGACCGCTAGCCTAGCAGC----CCTAGCAGGATTGTCAATCAAG--TTACGAAATCGACGCCTATATAT-----
---CCGCAGCTTTAGCCAGCCACACCACTACAACAACAGAAAGCATTCTACTCCT-------CCACAC-AAGTGAAGTGA
GAGCTTTGCGCTGAAAGTTCATCAGCAACTATGAAGGGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGAGTCCTCTCGCACGTCAACGGTAAGC--TGCAGATGCTGCTCAGCCATTCTACATGCTCCTCAACAAAGCTCGA
TCGATTGCCTTTTCGTGATCGCGGTGAGGGATCGAG--------GTCTGTGTTTA----TGGGTGATGCTA---------
TCTGATGC---CGATGTCTT-TGCGTGCGTGCAGCCGACTTCTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCGGG
GGTCGACGTCTGCGACGACGCCCACCCCAAGTGTCCCAAGGGCTGCTCGGCGTGCCGCGTGGTGTCGACGAGCCC---CG
AAATGTGGCGCTGCGCGGATATGAAATCCACCGTCGACGGCACCTGCGGTGGACCCTGCAAGAAGTACTGATCGGTTCAT
GCCGG------CATATGATATGTTCCGCCTAAAATTAAATAAAAGCTCGGACGAGATGAGCAGCGTCATCGTGCCTATGC
GTGTGTGTGTGACCAACA-----------AATATGTATACCAGTAT-GTCGTGTCTTCGTCGCTGTGTTTTCTCTCTCGA
GAAAAAGTTGGTGTTGCTTGT-----T------------------------------------------GTTCAGCTAT-
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>chr1D_992
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----------------------------------------------------------AATCGACGGCTATATATAGAGC
TGCCCGCAGCTTTAGCCAGCCACACCACCACAACAACACAGAGCATTCTACCACCGC----ACCGCAC-GAGTGAAGTGA
GAGCTTTGCACGAAAACTTCATCAGAAACCATGAAGGGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGT
CATGGGACTCCTCTCACACGTGAACGGTAAGCATTGCTCATGCT---CAATCGTTCTACCTGTAGT----------TCGA
TCGATTTGGGCGG-----------------------------TCATATCTTGTAG----CAAGTGACA-TA---------
CCTGATGC---CGATGTC-T-TGCGTGCTTGCAGCCGATTTTTTCCCCAAGTGCTGCAACAACTGCAGGTCCTTCTCGGG
GGTCGACGTCTGCGACGACGCCCACCCCAAGTGTCCCCAGGGCTGCTCGGCGTGCCGCGTGGTGTCGACGAGCCC---CG
AAATGTGGCGCTGCGCGGATATGAAATCCACCGTCGACGGCACCTGCGGTGGACCCTGCAAGAAGTACTGATCGGTTCAT
GCCGGC--------ATGATATGTTCCGCCTAAAATAAAATAAAAGCTCAGGCGAGATGAGCAGCGTCATCGTGCCTATGC
GTGTGTGTGTGGCCAACA-----------ATGCT-TATACCAGTAT-GTCGTCTCTTCGTCGCTGTGTTTTCTCTCTCGA
GAAAAAGTTGGTGTTGCTTGT-----T------------------------------------------GTTCAGCTAT-
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>SNPs
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--------------------------------------------------------------------------------
--------------S-----------------------------S--------------S--------------------
---------------S----------------------------------------------------------------
------------S----------------------------------------S--------------------------
-----------------------------S--------------------------------------------------
-S-----------------------S--------------------------------------------S---------
---S------------------S-------------------------------------S-------------------
-----------S------S----------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S---S---------------------------
---------------SS------S--------SSS--------------------------------------------S
------S-------------------------SS-------------S----------------S---------------
-----S------------------------------------------------------------------------S-
-----------------------------------------------------------------------S--------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------S-------------------------S-----------------------------------------
----------------S---S-----------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
-S----------------------------SS--SSSS--SSSSSSSSSSSSSS--------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------S-----------------------
---------------------------S----------------------------------------------------
----------------------------S--------------S------------S-----------S-----------
-------------------S-----------S------------------------------------------------
--------------S----S------------------------------------------------------------
S---------------S------------------S-------SSS--S-------------------------------
----------------------S------------------------S--S-------------------S---------
------S--------------S--------------------------------S------------S------------
-----------------------------------------------------------S--S--------
>forward_755
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---------------GAGGCAGATCCGATCCACTG---------------------------------------------
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>reverse_2217
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--------------------------------------------------------TGCGAACCACCTGAAGTTGT----
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