>input_sequence_75158
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--------------------ATGCGCAAGGCGAGGCCGCCGCAGCCCCAGCCGCAGCCGTCGCAGCAGTCGCCGGAGATC
CGGTACCGCGGCGTGCGGAAGCGCCCCTCGGGCCGCTACGCCGCCGAGATCCGGGACCCCGCCAAGAAGACGCCGATCTG
GCTCGGCACCTTCGACTGCGCCGAGGACGCCGCCCGCGCCTACGACTCCGCCGCCCGATCCCTCCGCGGGCCCACCGCCC
GCACCAACTTCCCGCCCTCCTCCGCCACGCAGCCGCCGCCGAGG---CCCCCTCCCCCCGCGGCCGCGGCCG---CGGCC
GCCACGTCCAGCCAGAGCAGCACCGTCGAGTCCTGGAGCGGCGGCGGGCCCCGCGCCCCCGCCAGGGCCCGCAGCGCCGC
CCGAGCGGGCACGGCCAAGGAGGGGGAGGAGGACTGCCGCAGCTACTGCGGCTCCTCGTCCTCCGTCCTCCTCGAGGAGG
GCGCGGACGACGCGGCCGCCTCCCGCTCCCCGCTGCCCTTCGATCTGAACATGCCGCCCCCGCAGGAGGGGGCGCTTGAC
GCCG---------AGGCCGATCAGATGACCTGCCGGTACGACACGCTGCTCCGCCTCTAG--------------------
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>chr7B_1_TraesCS7B01G335700
TTGGGTCTTCCCACGCCCCTGAGCACCGCCATCAGTCCAAGGGCCCGCCTCTACAGAGATGACTTTTCCTCGTTGTCTGA
GAAAACCCGTGGAATTTGAGCTTTCAATTAAAATTCGATTCTCCTACCATCCAACAGTCCTAGCGCCCGAGATTGCCAAG
ATACAATCTCAATTCTTGAAATTCCATACTCACATACTGTCGTCCAAATGACGTGACGCATCCGAACGGCGTGCTATTGA
AAATTTGGATAGAATTACACAAAGCAAGCCTGTCGATCTTCTTTTTGGA--AATCAAGTTCGTGGAAATTTACCGTTG--
-CTTCTTAACCCCAAATCATTCGTACGCAGCAGTACTAGCTGCTTCTCAGAGCAGAAGGCA-------CGCTCGGGTCTC
TACAAGCCAGCCACCAGAATATCGCCGCCTAATCGTGCCGTCCCCAAATTACTCTCCACTAACCCCGAATATACCCCGGG
ACG----------GGACGGGACGGGCGGGTCGTATCCAGCCGGCTGCCTGTGTGGGAACCGCCTGTGTGCCGAAGAAATT
AGAGCAACGCGAGACGCGACGCGACGCGCCCAAGCAGAAAGAAACAGGGGCAGGAAGGAATGCCGACCCCAAATCCAGGC
GTCGCCCGGATTTTAATAGAA----AAAGGCACGCCACCCAGACGCCAGACCCAACCAAACCAGACCATACCCCAGTCGT
AGTGGTGGAGCAGAGCAGTGCAGAGCCGGATCGGCCGTAGTCGTACTCG----AGCGAGTAGCGTAGGCGTAGCGACCAC
CACCAGACCAGCA----------GCAGCGGGCAGCCGAGCCGAGCCGGGGCG------CGCGTGAGAGGAGGAGGAGAAA
CCAAAGCAGGCGTCCGCCCCCCATCCCCTTCCCCCTCCCCCTCCCCTCCCCTCCCGCTTTCCCACCCAGGCAGGCCAGGG
GCCAAGG---------GAGGGAGCCCAAACAAAA-AACCACCAGGGGAAGAAGGGAAAGACA----CACGCCACTGTGAC
CAAACCCTAGGCCGGCCGCGATGCGCAAGGCGAGGCCGCCGCAGCCCCAGCCGCAGCCGTCGCAGCAGTCGCCGGAGATC
CGGTACCGCGGCGTGCGGAAGCGCCCCTCGGGCCGCTACGCCGCCGAGATCCGGGACCCCGCCAAGAAGACGCCGATCTG
GCTCGGCACCTTCGACTGCGCCGAGGACGCCGCCCGCGCCTACGACTCCGCCGCCCGATCCCTCCGCGGGCCCACCGCCC
GCACCAACTTCCCGCCCTCCTCCGCCACGCAGCCGCCGCCGAGG---CCCCCTCCCCCCGCGGCCGCGGCCG---CGGCC
GCCACGTCCAGCCAGAGCAGCACCGTCGAGTCCTGGAGCGGCGGCGGGCCCCGCGCCCCCGCCAGGGCCCGCAGCGCCGC
CCGAGCGGGCACGGCCAAGGAGGGGGAGGAGGACTGCCGCAGCTACTGCGGCTCCTCGTCCTCCGTCCTCCTCGAGGAGG
GCGCGGACGACGCGGCCGCCTCCCGCTCCCCGCTGCCCTTCGATCTGAACATGCCGCCCCCGCAGGAGGGGGCGCTTGAC
GCCG---------AGGCCGATCAGATGACCTGCCGGTACGACACGCTGCTCCGCCTCTAGCTCCACGACGACGA---G--
-AGCAAGGATTCGTGGGAGGGG-AACTGGGAAAAGGAACGAGAAAAGCGCTTGCCCCCGCTCCG-----CTCCGGTCCGT
CTTCCGATGATCTCGTGGTGTTCTCTCTTTGTTAGAAATGGATAATTCTTGCCATTTTTTTTTCTTACTTTCTTTCCTTC
TTCT-TTTTTTTTTCTTCTTACCACTTTGATTCGATATGTGAATAATTGAGTCATGTAAGCTGCGAGCAAGGAAATCTGA
GCTTTTCCTTATCTTTCTCTGTGGTATTTCAAGAGTGATTTGCTGCTGTTGTTGTTTCATTAATTGGAAAAGGGTAATCG
AAGGAATGAAGAGAAAGTATTT-ACACACATGTGGCCGGTGATTGCCACCGCTTCATCATTTCAAATCTGTATGGCTATT
GCAAGTGCTGAAATGCAAATCATCACATGTAGCAAGCATCATGAATACTAGGATTGTCTCAAAGTTTTAAGATGCACAAA
TGCTGAAATGCAAATTATCATTATCTGAAT---------AGTTGTA---TATGAATTAGAGATCAGTTCTATACATGGTG
ATGCAACTGCTACTTGCTACTGCTGTCTCATCTAAGTTTGTGTATCTAAGCTAAATGAAGAATACGTAGCATGGTCACAA
GTGCCTGAATTGTTAAA-GGTATGTGTGCATTGCAATTGCAAGTTTGATGGATGGCATTATCTGAAATTTCTAACCGAAA
TGTTGATTTTT----GCAGCGTTTCTTCTTTCAAGCTACCAGTGTTACTTTAGAGAAAAGGCTGCCGATGTTATATCAAT
GGTTTTGCGTTTTGCTGTTCCTTCGAAGCACTCGTGTATAAGAGCCATTGCTTCACTGGATCATATTTTGTAGGCTTGAA
GCAATATCCTTTGAATAACCGGGATGAGAATGTAGACCCTTTTGTCAAGTGCAGAC--------TTGCAGGTGCATATAG
TTTTGGCTGTCACATTCGGAGGAGCCGCAGACGTGTTATGCTCATCCTTGTGCTTGACC
>chr7A_133
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----------------------------------------------------AACTGTTCTAGCAGCCGACATTGCCAAG
ATACAATTCCAGTTCATGAAATTCCATACCCGCATACTATCAGCCCAACAACGTGAAGCATCCAAACGGCGTGCTACTGA
AAATTTGAATATAATTACACAAAGCAAGTCTGCTGTTTTTTTT--------AATTAAGCTCGCCGAAATTAACGTTTTTT
TTTTCTTAACCCCAAATCCTTCCTACACAGTAGT------TCCTTGCCAGAGCAGAACACACGCACTGCGCTCGAGTCTC
TACAAGCAAGCCACAAGAATATCGCCGCCTAATCGTGCCGCCCCAAAATTACTCTCCACTAACACT-AATATACCCCGGG
ACGAGATGCGACGGGACGGTACGGGTGGGTCGCATCCAGCCGGCTGCCTGTCTG---------------CCGTAGAAATT
AGAGCAACGCGAGACGCGACGCGACGCGCCCAAGCAG-AAGAAACAGGGGCAGGAAGGGACGCCGACCCCAAATCCAGGC
GTCGCCCAGATTTTAATAGAAAGAAAAAGGCACGCCACCCAGACCCA--ACCAAACCAGACCATACCATACCGCAATCGT
AGTGGTGGAGCAGG----------GCCGGATCGGTAGCAGTCGCACGTACTCCAGCGAGTAGCGTAGGCGTAGCGACCAC
CACCAGACCAGCAGCAGTGCACAGCACCGGGCAGCCGAGCCGAGCCGGGGCGTGTGCCCGCGT--GAGGAGGAGGAGAAA
CCAAAGCAGGCGTCCGTGCCCCATCCCCTCCCTCCCT-CCCTCCCTCCCCCTTCCGCTTCCCCACCCAGGCAGAGGCAGA
GGCAGGCCAGGGGGCCGAGGGAGCCCAAACAAAA-ACCACCAAGGGGAAGAAGGGAAAGAAGCACGCACGCCACTGTGAC
CAAACCCTAGGCCGGCCGCGATGCGCAAGGCGAGGCCGCCGCAGCCCCAGCCGCAGCCGTCGC---------CGGAGATC
CGGTACCGCGGCGTGCGGAAGCGCCCCTCGGGCCGCTACGCCGCCGAGATCCGGGACCCGGCCAAGAAGACGCCGATCTG
GCTGGGCACCTTCGACTGCGCCGAGGACGCCGCCCGCGCCTACGACTCCGCCGCCCGATCCCTCCGCGGGCCCACCGCCC
GCACCAACTTCCCGCCCTCCTCCGCCACGCAGCCGCCGCCGCGCCCTCCCCCTCCCCCCGCGGCGGCCGCCG---CGACC
GCCACGACCAGCCAGAGCAGCACCGTCGAGTCCTGGAGCGGCGGCGGGCCCCGCGCCCCCGCCAGGGCCCGCAGCGCCGC
CCGAGCGGGCACGGCCGAGGAAGGGGAGGAGGACTGCCGCAGCTACTGCGGCTCCTCCTCCTCCGTCCTCCTCTGCGAGG
ATGGGGACGACGCGGCCGCCTCCCGCACCCCGCTGCCCTTCGATCTGAACATGCCGCCCCCACAGGACGGGGCCCTTGAC
GCCGCGGCCGCCGAGGCTGATCAGATGACCTGCCGCTACGACACGCTGCTCCGCCTCTAGCTCGACAACGACGACGAGAA
TAGCAAGGATTCGTGGGAGGGGGGACTGGGGAAAGGAACGAGAAAAGCGCTTGCCCCCGCTCCGCTCTGCTCTGGTCCGT
CTTCCGATGATCTTGTGGTGTTCTCT-TTTGCTAGAAATGGAGAATTCTTGCCAC-TTTTTTTCTTACTTTCTTTCCTTC
TTCT-TTTTTTCTTCTT---ACCACTTTGATTTGATATGTGAATAATTCAGTCATGTAAGCTGCGAGCAAGGAAATCTTA
GCTTTTCCTTATCTTTCTCTGTGGTATTTCAAGAGTGATTTGCTGCTGTTGTTGTTTCATTAATTGGAAAAGGGTAATCG
AAGGAATGAAGAAAAAGTATTTGACAGACATGCTGCCGGTGATTGCCACCGCTTCACCATTTCAAATCTGTATGGCTATT
GCAAGTGCTGAAATGCAAACCATCATATGTAGCAAGCATCATGAATTGAG---TTATCTCAAAGTTTTAAGATGCACAAA
TGCTGAAATGCAAATTATCATTATCCGGATGTCTTAATAAGTTGTA---TATGAATTAGAGATCAGT-CTATACATGGTG
ATGCAGCTGCTACTTGTTACTGCTGTCTCATCTAAGTTTGTGTATCTAAGCTAAACGAAGAATACATAGCATGATCACAA
GTGCCTGAATTGTTGAA-GGTATGTGTGCATTGCAATTGCAAGTTTGATGGATAGCATTATCTGAAAATTCTAACCGAAA
TGTTGATTTTTTTTTGCAGCGTTTCTTCTTTCAAGCTACCAGTGTTACTTTAGAGAAAAGGCTACCGATGTTATATCAAT
GGTTTTGCGTTTTGCTGTTCCTTCGAAGCACTCGTGTATAAGAGCCATTGCTTCACTGGATCACGTTTTGTAGGCTTGAA
GCAATTTCCTTTGAATAACCGGGATGGGAATGTAGACCCTTTTGTCAAGTGCAGAC--------TTGCAGGTGCATATAG
TTTTGGCTGTCACATTCTGAGGAGCCACAGACGTGTTGTGCTCATCCTTGTGCTTGAC-
>chr7D_158
AAGATG--------------------------------------------------------------------------
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---CAATTCCAATTCATGAAATTCCATACCCGCATACTATCATCCAAACG-CGTGAAGCAACCAAACGGGGTGCTATTGA
AAATTTGAATAGAATTACACAAAGCAAGTCTGCCGATTTTTTTTTTTGGAAAATTAAGTTCGCCGAAATTAACCGTTG--
-TTTCTTAACCCCAAATCACTGCTACGCAGTAGT------TGCTTGTCAGGGCAGAACACACGCAATGCGCTCGGGTCTC
TACAAGCGATCCACCAGAATATCGCCGCCTAAGCGTGCCGCCCCAAAATTACTCTCCACTAACCCCGAATATACCCCGGG
--------------GACGGGACGGGCTGGTCGTATCCAGCCGGCTGCCTGTGTG---------------CCGTAGAAATT
AGAGCA------------ACGCGACGCGCCCAAGCAGAAAGAAACAGGGGCAGGAAGGGACGCCGACCCCAAATCCAGGC
GTCGCCCGGATTTTAATAGAAAGAAAAAGGCACGCCACCCAGACCCA--ACCAAACCAGACCAG-----ACCGCAATCGT
AGTGGTGGAACAGA----------GCCGGATCGGTAGCAGTCGCACGTACTCCAGCGAGTAGCGTAGGCGTAGCGACCAC
CACCAGACCAGCAGCGCTGCACAGCACCGGGCAGCCGAGCCGAGCCGGGGCG------CGCGT--GAGGAGGAGGAGAAA
CCAAAGCAGGCGTCCAT--------------------CCCCTCCCTCCCCCTTCCGCTTCCCCACCCAGGCAGAGGCAGA
GGCAGGCCAGGGGGCCGAGGGAGCCCAAACAAAAGACCACCAAGGGGAAGAAGGGAAAGAAGCACGCACGCCACTGTGAC
CAAACCCTAGGCCGGCCGCGATGCGCAAGGCGAGGCCGCCGCAGCCCCAGCCGCAGCCGTCGCAGCAGTCGCCGGAGATC
CGGTACCGCGGCGTGCGGAAGCGCCCCTCGGGCCGCTACGCCGCCGAGATCCGGGACCCGGCCAAGAAGACGCCGATCTG
GCTCGGCACCTTCGACTGCGCCGAGGACGCCGCCCGCGCCTACGACTCCGCCGCCCGATCCCTCCGCGGGCCCACCGCCC
GCACCAACTTCCCGCCTTCCTCCGCCACGCAGCCGCCGCCGCGGCCTCCCCCTCCCCCCGCGGCGGCCGCCGCCGCGACC
GTCACGTCCAGCCACAGCAGCACCGTCGAGTCCTGGAGCGGCGGCGGGCCCCGCGCCCCCGCCAGGGCCCGCAGCGCCGC
CCGAGCTGGCACGGCCGAGGAGGGGGAGGAGGACTGCCGCAGCTACTGCGGCTCCTCGTCCTCCGTCCTCCTCTGCGAGG
ATGGGGACGACGCGGCCGCCTCCCGCTCCCCGCTGCCCTTCGATCTGAACATGCCGCCCCCGCAGGACGGGGCCCTTGAC
GCCGCGGCCGCCGAGGCCGATCAGATGACCTGCCGCTACGACACGCTGCTCCGCCTCTAGCTCGACGGCGACGA---GAA
TAGCAAGGATTCGTGGGAGGGGGAACTGGGGAAAGGAACGAGAAAAGCGCTTGCCCCCGCTCCGCTCTGCTCTGGTCCGT
CTTCCGATGATCTTGTGGTGTTCTCTCTTTGCTAGAAATGGATAATTCTTGCCAC-TTTTTTTCTTACTTTTTTTCCTTC
TTCTTTTTTTTCTTCTT---ACCACTTTGATTCGATATGTGAATAATTCAGTCATGTAAGCTGTGAGCAAGGAAATCTGA
GCTTTTCCTTATCTTTCTCTGTGGTATTTCGGGAGTAATTTGCTGCTGTTGTTGTTTCATTAATTGGAAAAGGGTAATCG
AAGGAATGAAGAGAAAGTATTTGACACACATGCTGCCGGTGGTTGCCACCGCTTCACCATTTCAAATCTGTATGGCTATT
GCAAGTGCTGAAATGCAGACCATCATATGTAGCAAGCATCATGAATTGTG---TTATCTCAAAGTTTTAAGATGCACAAA
TGCTGAAATGCAAAATTTCATTATCC-GATGTCTCAATAAGTTGTATACTATGAATTAGAGATCAGTTCTATACATGGTG
ATGCAGCTGCTACTTGTTACTGCTGTCTCATCTAAGTTTGTGTATCTAACCTAAACGAAGAATACATAGCATGGTCACAG
GTTCCTGAATTGTTAAAGGGTATGTGTGCATTGCA-TTGCAAGTTTGATGGATAGCATAATCTGAAAGTTCTAACCGAAA
TGTTGATTTTT----GCAGCGTTTCTTCTTTCAAGCTACCGGTGTTATTTTAGAGAAAAGGCTACCGATGTTGTATCAAT
GGTTTTGCGTTTTGCTGTTCCTTCGAAGCACTCGTGTATAAGAGCCATTGCTTCACTGGATCACATTTTGTAGGCTTGAA
GCAATATCCTTTGAATAACGGGGATGGGAATGTAGACCCTTCTGTCTAGTGCAGACTTGCAACTTTGCAAGCGCATACAG
TTTTGGCTGTCACATTCGGAGGCGCCACAGACGTGTTGTGCTCATCCTTGTGCTTGACC
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S-----SS----S---------
-------SS------S-------------S-S------S--S------S-------S------S----------------
-------S--------------------S---S----S--S-----S-S-----S-------SS------S---------
-S--------------------S-------S---SSSSSS-----S-----------SS---------------------
-------S--------------------------------S---S-----------------------------------
------------------------------------------------------SSSSSSSSSSSSSSS---S-------
----------------------------------------------------------S-S-------------------
--------------------------------------------S-SSS---S-----S-------------S--S----
--------------SSSSSSSSSS----------SS-S-----S--SSS-------------------------------
--------------------------S------------------------------------SS---------------
----------------SS-----------S--S--SS--------SS-----S------S-------------SSSSS-S
-S--S-S-----------------------------S-SS-S------------------SS------------------
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-----------------------------------------------------------S--------------------
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-----------------------------------------S----------------------S--S---------S--
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----------------S--------------------------------------------------------SSS----
SS-S---------------------------------------------------------------S-----S------
-----------------------------------S---------------------------S----------------
------------------------------S-----------------------------------------S-------
-------------S-----------------S----------------------SS------------------------
-----------S-----SSS----------------------------S-------------------------------
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--------------------------------SS----------------------S-----------------------
-------------------S-----S--------------------SS-SSSS--S------------------------
-------------------------S-S----------------------------------------------------
-----S----------S--------------------------------------S---------S--------------
-----------------------------------------------------S-------------S------------
---------------------------------------------------------------S----------------
---------------------------------------------------------------S----------------
--------------------------S-----------------------------------------------------
--------------------------S----------S---------------------
>forward_738
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------------------------------------------------------------------------------GT
AGTGGTGGAGCAGAGCAG--------------------------------------------------------------
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>reverse_1753
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------------------------------------------------------------------------CGGTCCGT
CTTCCGATGATC--------------------------------------------------------------------
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