>input_sequence_75062
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-----------------------------------------------------ATAGTCAAATGAGTCTTCTAGCACAGC
CATTGGT-----------------------CTTTTTTCCTGCTAATCACAGCCTTTGATTTGTTGATGAGAT--TAGAAA
TAGCGCCAACCATGTC---AAAA------AAAAGAGCGCCAA-------GCCAAAAAGTATCGGATTGGATTAGAAATTG
TGCCT-CCCGAAGCGTGACAAGAAAACAAATCAGATTTCGATCCCAACTTCCCCCGAGCTTCACTGCCCTAGTT------
-----------CTCAATCCCCTCTTTCCCCGATCTTCGCCGCCCTAGTTTTCGATCCCTAGTTTCC--------------
CTGATCTCGACTCTCGGGA---------------TCGAACATGACAGCGATCATGGCAGCGCGTGGGCAGGGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCATGAAAGACGGGAGGATCTTCCCACAGGAAATCATC
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCGGTGCTTCGCAGGTACATTCTTCCAAAACATCA
ACATGTGCTGACTCAATTTTGCAGGGAACTCACTTGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGAACTCGGCGAGG
CGCTCTAG------------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G169300
ATGTGTACTATTTGTAATCTACTTCCTCCATCCCATAAGTGTCAAAAACGCTCTTATATTCTGGGATGGAGAAAATATTT
GTTTAATCAAATATACATGATTATTTCAAAAAAAGAAAAGAAAAGTTACACGCGGATCGTTGGATCTTTAATGCATGGCC
CAAATTGACCAAGTAACAGCTCAGACCAAATGTCTCCCGCCGGCTCCAGCCAGGCTAACCAGGGTCA----------GTT
AAATGTAACTATCAC-------TAGACGCCTTCCAGTGTTGCTATGTCGGGAACCCAACTGTGATGGTGAAACATACCTG
TCGCCACCAATTTGGCGACTGTCCCCAGCCCCACCAACACTCCACCGCTCGTACTCGTCGCCTAAGAAAACCGTTGCGGA
AGCTCGAAACGCTACTGCCAATTCGGATAGTATCCCCGCCCGAGATGGTCGCACTATACCATCATCAGCCATCCAGGTTT
ATTAGAA-------------------------------------------------------------------------
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----------------GTCGGGTATCCTCCAATCTACCGACTCGAGCACTGTAGAGTCGTTGGCCTCGTTCGGAGCTTCC
GCGCTCTCAATCGTTGGATTTCACGTTTAAATTGCTTTCCAATTTTTTGGGCTCCAGCTTTTGGGCATATGAAAAGCAAC
GGGCGGGCACGGGGGAAAATATCAGGTGCTACTAACTCTTTATGTGATACCATGATATAGACTTTCGAGGCATTGGATCT
CAGATGTGATGGCTCT-GGGAGGTCTTGAACATTTTGCAAAAAGAAAAAGAACCATCTAAGAGTCTCAAAACTGCATGCA
GGTACAACAATTTCTCAAATGTCGTCGGATGTAAGATTCAACGGCTGCCAGAATCCTGTATCACGGTATCACCTAAGGGC
TAGTAGCACCTGATATTTTTCCGCAGCCATGGTGCCCAAACACCTTATCTCTTCTGGCCTATAACTGTTTTTACATCATC
AAGTTTAACAC---------AAGATGCTCTAAGACTCACACACACAAT--------------------------------
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-------------------------AAAAAAACTCCAACAAAACCAACTAAACATAGTCAAATGAGTCTTCTAGCACAGC
CATTGGT-----------------------CTTTTTTCCTGCTAATCACAGCCTTTGATTTGTTGATGAGAT--TAGAAA
TAGCGCCAACCATGTC---AAAA------AAAAGAGCGCCAA-------GCCAAAAAGTATCGGATTGGATTAGAAATTG
TGCCT-CCCGAAGCGTGACAAGAAAACAAATCAGATTTCGATCCCAACTTCCCCCGAGCTTCACTGCCCTAGTT------
-----------CTCAATCCCCTCTTTCCCCGATCTTCGCCGCCCTAGTTTTCGATCCCTAGTTTCC--------------
CTGATCTCGACTCTCGGGA---------------TCGAACATGACAGCGATCATGGCAGCGCGTGGGCAGGGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCATGAAAGACGGGAGGATCTTCCCACAGGAAATCATC
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCGGTGCTTCGCAGGTACATTCTTCCAAAACATCA
ACATGTGCTGACTCAATTTTGCAGGGAACTCACTTGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGAACTCGGCGAGG
CGCTCTAGATGCACGACTCCTGGCTGAAGGTGGCGACAGCAGGGGCAGGGAGTGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGTATAGTGGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATATTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGGGCAAATACTGGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGGAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCATCGAGGAGGTCATGGACGTCAGGGAA
GAAGTCGTCATCGGGGAAGTAGTCATCGGCGACCGGATCATCCTTGATGAAGCAGCCAGTAGTCGCGATGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCAGTTTCGGAGGCCTACTATCCCGGCGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGACAACAACAGCTCAGAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTGGTGCACCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGTGCAAGAGAAGGAGGCGAGAGGGCAGCGACAGGAGGTGAAACAAAGAGAT
GGAGATGGAGCGAACAGCCAGCAGCCGAA-GGGCTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCTATGTGACCTTTCATATACCCGTAGTGCGTGGCAAAAATTTA--CATTGGCTCGGCTCATTCCCGCAACCCATGGCA
CATCGTGACGAG----------GCGT-----GGCGTGGCGAGACGGGCAACGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCCTCTAAACTA
>chr3D_1
ATGTGTACTATTTGTAATCTACTCCCTTCATCCCATAAGTGTCAAAAATTCTCTTATATTATGGGACAAAGGAAGTATTT
GTTTAATCAAATATATGTTGTTATTTCAAAAAAATA----------TACACGTGGGTCGTTGGATCTTTAATGCATGACC
CAAATTGACCAAGTGACAGCTCATACCAAATGTCTCTCGCCGGCTCCAGCCAGGCTAACCAGGGTCATGTTATAACAGTC
AAACATAACTATCCCTAATGTTTAGATGCCTTCCACCGTTGCCGCGCCGGGAACCGAACCGCCATGGGGAAACATACTTG
TCGTCGCCAATCCGGCGACCGCCCCCAGCCCCGTCGCCACTCTGT-GCTCGTACCCGTCGGCCAAGAAAACTGTTGCGGA
AGCTCGAAACGCCACCACCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTCGGGCGTCGTCCAATCTACCGACCAGAGCACCGCCGAATCGCTAGCCCCATTTGGAGCTCCG
GACCTCTCAACCGTTGGATTTCATGTTCAATTA-CTTTTCAAATTTTTGGGCTCCAGTTTTTGAGCATATGAAAAAGCAA
CATCAGCCAC--GGGAAAATATCATGTGCTATCGACTCTTTACGTGATACTGTGATATAGACTCCTAAGCGGCTGGATCT
CAGATCTGATGATTCCCGGAAGGTCTTGAACATTTTACAAAAA-------AAACATCCAAGAGTCTCAAAATTGCGCGTA
GATACAACAACTTCTCAGATGTCGTCGGATCTAAGATCCAACGGCT-CCAAAAGCCTGTGTCACGGCATCACCTACGGGC
CAGTAGCACCTGATATTTTTTAGCAGCCACGATGCTCAAACACCT--TCTCTTCTGGCCTATAACTGTTTTTGCTTCACT
AAGTTTTACGTCATCTGTTGAAGATGCTTTAAGACTCTAGAGTAGAAGTAGCGGGATACACTATAGCTGGCCAAATGGGC
CGGGCTAACCAGGCCGACTCGTGAGCACGCCGGCACGGCACGGGCTAAACGGGGCCGTGCTTGGGCTGCTAGCCTGAGCA
CGCGGGCCGGCATGGCACGGCCCGATTACGGTTTATTTATTTTTCTATACATCTCTATATGACCCAACAGGTAAAAATAG
GCTAAAAAACGCCTAGTGCGTCAAATAGCAGACGAACTAGCAGGTCTGGCGTGAGGGTGGGCCGCCCCTATTAGTAGATG
GCCGTGCCTGGGTTGCGACCTCTGGCCGGCACGGCACGACGCGGCTATTAGTCGTGCCGTCGTGGGCCGTGCCGTGCCAG
GCACGTTTAGACTACTCACAATGGGAGTAACACAGGTAGTAACATCACACATATCTAGATAAAATAAATGATGTGGCAAG
TAATAAATGAAGAAAGAGTGGAAAGTGGTAACATAGCTAGTTACTACTAGTAGTAGTAGTAACATCACACATATCAAGGC
AAGATGTGTCTATAGCCTAATAAATGAAGTGCTTCATGTTACCACACATATGTTACTCCCCACTGTAGAGGTAGTAACAT
AGAGTAGTAACATCGACAGAGGTAGTAACATGTCGATGTTACTACTCTATGTTACTACCCATTGTGTCTAGTCTTACCGC
GGCCAGGTATGAGATACACCAAGGAAAAAAAACTCCAACAAAACCAACTAAACAGACTCAAACGAGTCTTCTAGCACAGC
CATTGGTTGTTCCCGCTGATCACAGCCTTTCTTTTTTCCCGCTAATCACAGCCTTTGATTTGTTGATTAGACTATAGGAA
TAGCGCCAACCACGTCA--AAAAAAAAAAAAAAGAGCGCCAA-------TCCGACAAGTATCGGATTGGATTAGAAATTG
TGCCTGTCCCAAGCGTGAGGAGAAAACAAATCAGATCTCGATCCCAACTTTCCCCGACCTTCGCTGCCCTAGTT------
-----------CTCGATTCCCTCTTTCCCCGATCTTCCCCGCCCTAGTTTCCGATCCCTAGTTTCC--------------
CCGATCTCGATTCTCGGAGTTTTCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGAGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTCGACTTCGAGGCGACGTGCGTGAAAGACGCGCGGATCTTTCCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCCGCGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTGACCCAATTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGAACTCGGCGAGG
CGCTCTGGATGCACGACTCCTGGCTGAAGGCGGCGACGGCGGGGGCAGGGAG----------------------------
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>chr3D_1073
AGATTAAA------------------------------------------------------------------------
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-----------------------------------------------------------------------------AAA
TAGCGCCAACTGCGTAA--AAAA------AAGAGAGCGCCAAGTGTTGTTCCGATAAGTATCGGATTGGATTAGAAATTG
TGCCTGCCCGAAGCGTGACGATAAAACAAATCAGATTTCGATCCCAGCTTTCCCCGACCTTCGCTGCCCTAGTTT-----
------------TCGATTCCCACTTTCCCCGATCTTCGCCGCCCTAGTTTTCGATCCCTAGTTTCC--------------
CCGATCTCGACTCTCGCAGTTTGCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTCGACTTCGAGGCGACGTGCGTGAAAGACGCGCGGATCTTCCCGCAGGAAATCATC
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCCGCGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTGACCGAGTTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGATCTTGGCGAGG
CGCTCTGGATGCACGACAATTGGCTGAAGGCGGCGACGGCGGGGGCAGGGAG----------------------------
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>chr3B_1080
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-----------------------------------------------------------------------------AAA
GAGCGCCAACCACGTTA--AAAA------AAAAGAGCGCCAA-------TCCGAAAAGTATCGGATTGGATTAGAAATTG
TGCCTGCCCCAAGCGTGACGAGGAAACAAATCAGATTTCGATCCCAACTTTCCCCGACCATCGCTGCCCTAGTTTCTCGA
CTCCCAACTTTCTCGACTCCGTATTTCCCCGATCTTCGCCG--------------CCCTAGTTTCC--------------
CCAATCTCGACTCTCGGAGTTTGCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCTGGTCC
AAGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCGTGAAAGACACGCGGATCTTTTCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCTGCATCCAGTCCGCGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTAACCCAATTTTGTAGGGAACTCACCGGCATCCGGCAGGAGGACGTCGACGGCGGCGTGGATCTCGGCGAGG
CGCTCTGGATGCACGACTCTTGGCTGAAGGCGGCGACGGCGGGGGGAGGCAG----------------------------
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>chr3B_1081
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------------------------------------------------------------------------------AA
TAGCGCCAACCACGTCA--AAAA------AAAAGCGCGCCAA-------TCCGACAAGTATCGGATTGGATTAGAAATTG
TGCCTGCCCCAAGCGTGAGGAGGAAACAAATCAGATTTCGATCCCAACTTTCCCCGACCTTCGCTGCCCTAGTT------
-----------CTCGATTCCCTCTTCCCCCGATCTTCCCCG--------------CCCTAGTTTCC--------------
CCGATCTCGATTCTCGGAGTTTGCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCAGGTGC
AGGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCGTGAAAGACGCGCGGATCTTTCCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCCGCGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTGACCCAATTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTCGACGGCGGCGTGGATCTCGGCGAGG
CGCTCTGGATGCACGACTCTTGGCTGAAGGCGGCGACGGCGGGGGGAGGCAG----------------------------
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>chr3B_1081
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------------------------------------------------------------------------------AA
TAGCACCAACCACGTCAAAAAAA------AAAAGCGCGCCAA-------TCCGACAAGTATCGGATTGGATTAGAAATTG
TGCCTGCCCCAAGCGTGAGGAGGAAACAAATCAGATTTCGATCCCAACTTTCCCCGACCTTCGCTGCCCTAGTT------
-----------CTCGATTCCCTCTTCCCCCGATCTTCCCCG--------------CCCTAGTTTCC--------------
CCGATCTCGATTCTTGGAGTTTGCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCGTGAAAGACGCGCGGATCTTTCCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTTGACGGCGCCACCGGCCGCATCGAGTCCGCGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTGACCCAATTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTAGACGGCGGCGTGGATCTCGGCGAGG
CGCTCTGGATGCACGACTCTTGGCTGAAGGCGGCGACGGCGGGGGGAGGCAG----------------------------
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>chr3B_1099
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-------------------AAAA------AAAAGCGCGCCAA-------TCCGACAAGTATCGGAT------AGAAATTG
TGCCTGCCCCAAGCGTGAGGAGAAAACAAATCAGATCTCGATCCCAACTTTCCCCGACCTTCGCTGCCCTAGTT------
-----------CTCGATTCCCTCTTTCCCCAATCTTCCCCG--------------CCCTAGTTTCCGATCCCTAGTTTCC
TCGATCTCGATTCTCGGAG--TTCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCTGGTCC
AAGATTTCGACTTCTTCGTGGTGGTGGACTTCGAGGCGACGTGCATGAAAGACGTGCGGATCTTTCCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCCGTGTTTCGCAGGTACGTTCGTCCAAAACATCA
CCCTGTGCTGACCCAATTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGAACTCGGCGAGG
GGCTCTGGATGCACGACTCTTGGCTGAAGGCGGCGACGGCGGGGGCATGGAG----------------------------
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>chr3A_1142
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---------------------------------------------------------------------------AACTG
TGCCTGCCCCAAGCGTGAGGAGAAAACAAATCAGATCTCGATCCCAACTTTCCCCGACCTTCGCTGCCCTAGTT------
-----------CTCGATTCCCTCTTCCCCCGATCTTCCCCG--------------CCCTAGTTTCCGATCCCTAGTTTTC
CCGATCTCGATTCTCGGAGTTTTCGCGCACCTCGTCGAACATGGCAGCGATCATGGCGGCGCGCGGGCAGGGGCAGGTGC
AAGATTTCGACTTCTTCGTGGTGGTCGACTTCGAGGCGACGTGCGTGAAAGACGCGCGGATCTTTCCGCAGGAAATCATT
GAGTTCCCCGCCGTGCTCGTCGACGGCGCCACCGGCCGCATCGAGTCGGCGTTTCGCAGGTACGTTCGTCC-AAACATCA
CCCTGTGCTGACTCAATTTTGCAGGGAACTCACCGGCATCCGGCAGGAGGACGTGGACGGCGGCGTGGAACTCGGCGAGG
CGCTCTGGATGCACGACTCCTGGCTGAAGGCGGCGACGGCGGGGGCAGGGAG----------------------------
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>chr2A_1628
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------------------------------------------------GGATTGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGTATACTAGTGATAAAACAAGCCATGCAATTTGACAAAGAGAA
GGTAAACAGCATCTTCATATATGAACTGTAACTAAACATATGTAGAGCAGACAATATAGCAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGTGCAAATACTAGAACAAAGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTGCGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCATCGGGGAAGTAGTCGTCGGCGACCGGATCGTCCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGATTTCGGAGGCCTACTGTCCTGACGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGACAGCAGCAGCTCAGAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTGGTGCGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACGGGAGGTGAAACGAAGAGAC
GGAGATGAAGCGAACAGCCAGCAGCCGAA-GG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCATATACCCGTGGTTCATGGCAAAAATTTAGACATCGGCTCGGCTCATTCCCGCAACTCGCGACG
CGTCGTGACGAG----------GCGT-----TGCGTGGCGAGACGGCCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATAAAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCCTCTAAACTA
>chr1D_1628
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------------------------------------------------GGATTGTTGAAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAAACAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGAAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCGTCGGGGAAGTAGTCGTCGGCGACCGGATCGTCCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAATCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGTCCCGACGTGCGGCGCACG
CCGCAAGCTGGGATGAGGAAGACAGCAACAGCTCAGAGATGGAACCGATGGCGAC-GGAAGGAGTAGTTCTGGTGCGTCT
CTCTGAGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGTGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCGAACAGCCAGCAGCCGAAGGG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATATTTTCAGC
TTCCTTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATTGGCTCGGCTCATTCCCGCAACCCGCGGCG
CGGCGC-----G----------GCAT-----GGCGTGGCGAGGCGGGCGGCGGAGGAGGAGCGCGCATGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCCTCTAAACTA
>chr1D_1628
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------------------------------------------------GGATTGTTGGAAATATGAGCAATTTACCAAAT
GATTTTATTAACAGAAATACTAGATAAAGCATAACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGTTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCGTCGGGGAAGTAGTCGTCGGCGACCGGATCGTCCGTGATGAAGCAGCCAGTAGTCGTGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGCCCCGACGTGCAGTGCACG
CCGCAAGCCGGGATGAGGAAGACAACAGCAGCTCAGAGATGGAACCGATGGCAAG-GGAAGGAGTAGTACTGGTGCGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACTGGAGGCGAAACGAAGAGAC
GGAGATGAAGGGAACAGCCAGCAGTCGAAGAG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCCAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATCGGCTCGGCTCATTCCCGCAACCCGCGGCG
CGGCGC-----G----------TCGTGACGAGGCGTGGCGAGGCGGGCGGCGGAGGAGGAGCACACATGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCCTCTAAACTA
>chr5D_1628
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------------------------------------------------GGATTGTTGGAAATATGAGCAATTTACCGAAA
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGACAAGAACACGTACGGG
ACAACAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCATCGTCGGGGAAGTAGTCGTCGGCGACCGGATCATCCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTATCCCGACGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGATAGTAGCAGCTCAGAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTGGTACGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAATGAGGCGAGAGGGCACCGACGGGAGACCAAATGAAGAGAC
GGAGATGAAGTGAACAGCCAACAGCCGAAGGG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATCGGCTC-----ATTCCGGCAACCCGCGGCG
CGTCGTGACGAG----------GCGT-----GGCGTGGCGAGGTGGGCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCCTCTAAACTA
>chr2D_1628
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------------------------------------------------GGATTGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATGTAGAGCAGACAGTATAGCAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAAAACACATACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCATCAGGGAATTAGTCGTCGGCGACCGGATCGTTCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTTCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGTCCCGACGTGCGGTGCACG
CCGCAAGCCGAGATGAGGAAGACAACAGCAGCTCAGAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTGGTGCGTCT
CTCTTGGAGAAGCGACCTTCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAACGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCGAACAGCCAACAGCCGAAGAG-CTGCACCGTTCGCATTCAAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATCGGCTCGGCTCATTCCCGCAACGCGCGGCG
CGGCGC-----G----------GCGCGGCGCGTCGTGACGAGGCGGGCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAGGAGGTCCAACTCCCACTCAACTA
>chr7D_1632
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----------------------------------------------------TGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAGCATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGATAGTATAGCAAGTTGCATATATGAAATAG
AGTCTAACCTATCTAGGGCAAATACTAGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCGTCGCGGAAGTAGTCGTCGGCGACCGGATCGTCCGTGATGAAGCAGCCAGTAGTCGCGCTAAGCGCTCCCC
AA-AACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGTCCCGACGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGACAGCAGCAGCTCAGAGATGGAACCGATGGCGAGAGGAAGGAGAAGTTCTGGTGCGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCGAACAGCCAGTAGCCGAAGGG-CTGCGCCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATCGGCTTGGCTCATTCCCGCAACCCGCGTCG
CGTCGTGACGAG----------GCGT-----GGCGTGGCAAGGCGGGCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAACTCCATCTAAACTA
>chr7D_1632
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----------------------------------------------------TGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAGAAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGGAAGTTGCATATATGAAATAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGGAACTGTAGCAGGACCTCTAATAGAAAGGAGAAAAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
AAAGTCATCGTCGGGGAAGTAGTCGTCGGCGACCGGATCATCCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTAGAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGTCCCGAAGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGACAGCAGCAGCTCAAAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTGGTGCGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCGAACAACCAGCAGCCGAAGAG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTTAGC
TTCCGTGTGACCTTTCGTATACCCGTAGTGCGTGGCAAAAATTTAGACATCGGCTCGGCTCATTCCCGCAACCTGCGGCG
CGGCGC-----GGCGAGGCGTGGCGT-----GGCGTGGCGAGGCGGGCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAGGAGGTCCAACTCCCACTCAACTA
>chr7D_1632
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----------------------------------------------------TGTTGGAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAA-TAG
AGTCTAACATATCTAGGGCAAATACTAGAACAAGGAACTATAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCAGGGAA
GAAGTCGTCGTCGGGGAAGTAATCGTCGGCGACCGGATCGTTCGTGATGAAGCAGCCAGTAGTCGCGCTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACATGACTCAAAATGTGCGGTTTCAGAGGCCTAATGTCCCGATGTGCGGTGCATG
CCGCAAGCCGGGATGAGGAAGATAGCAGCAGCTCAGAGATGGAACCGATGGCGAG-GGAAGGAGTAGTTCTAGTGCGTCT
CTCTGGGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCAAACAGCCAGCAGCCGAAGGG-CTGCACCGTTCGCATTCGAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATACTCGTAGTGCGTGGCTAAAATTTAGACATCGGCTCGGCTCATTCCCGCAACCCGCGTCG
CGTCGT-----G----------TCGT-----GACGTGGCGAGGCGGGCGGCGTAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGTCCAAATCCCTCTAAACTA
>chr1D_1633
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-----------------------------------------------------GTTGAAAATATGAGCAATTTACCGAAT
GATTTTATTAACAGAAATACTAGATAAAGCATGACCAGAATAGTAGTGATAAAACAAGCCATGCGATTTGACAAAGAGAA
GGTAAACAACATCTTCATATATGAACTGTAACTAAACATATCTAGAGCAGACAGTATAGCAAGTTGCATATATGAAAGAG
AGTCTAAACTATCTAGGGCAAATACTAGAACAAGAAACTGTAGCAGGACCTCTAATAGAAAGGAGAAGAACACGTACGGG
ACAGCAGCAGCAGAAGCGCTGGACTTGGGGTCGGTGTCCTCGCCTGCCATGTCGTCGAGGAGGTCGTGGACGTCGGGGAA
GAAGTCGTCGTCGGGGAAGTAGTCGCCGGCGACCGGATCGTCCGTGATGAAGCAGCCAGTAGTCGCGTTGAGCGCTCCCC
AAAAACCTTATCACCCTTCTCCCGTACAGGACTCAAAAGGTGCGGTTTCGGAGGCCTACTGTCCCGACGTGCGGTGCACG
CCGCAAGCCGGGATGAGGAAGACAGCAGCAGCTCAGAGATGGAACCGATGGCGAG-GGAAAGAGTAGTTCTGGTGCGTCT
CTCTGAGAGGAGCGACCTCCCTTTTATAGGCGCAAGAGAAGGAGGCGAGAGGGCAGCGACGGGAGGCGAAACGAAGAGAC
GGAGATGAAGCGAACAGCCAGCAGCCGAAGGG-CTGCACCGTTCGCATTCAAACTCCACTTTCGCAAAAATCTTTTCAGC
TTCCGTGTGACCTTTCGTATATCCGTAGTGCGTGGCAAAAACTTAGACATCGGCTCGGCTCATTCCCGCAACCCACGGCG
CGGCGC-----GTCGTGAGGAGGCGT-----GGCGTGGCGAGGCGGGCGGCGGAGGAGGAGCGCGCGTGGATGTCCCTCT
TGTTCTCATGCTCATACAAGTGGGGAAAGAACCTCCCTTATAAAGAGGCCCAACTCCCTCTAAACTA
>SNPs
-----------------------S---S--------------------SS----------S-----SSS--S--S-----
---------------SS-SS--------------S-SSSSSSSSSS------S--S---------------------S--
--------------S--------S------------S------------------------------------------S
---SS--------S------------S--------SS-----SSS-S--------S---S-SS----S---------S--
---S-S-----SS------S-S----------SS-SS-----SSSS--------S-----S-S--------S--------
------------S--SS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SS--S--------------SS------S-SS--S---S-S---S-S--S------S-S
-SS-------S------------S---S--S-SS----S---S--------------S-----S-----------SSS-S
SSS-S-S---SS------------S------SSS--------S-------SS-----------SSSS--SSSS-------
-----S-----SS--S---S----------------S------SSSSSSS--S----S-------------S---SS-S-
-S--------S------S------------S------S--------S---S--S-----S------S--------S----
S-------------------SS-------S-S---S---------SS-------------------------S-S---SS
------S--SS-----------------S--------SSSSSS-S--S--------------------------------
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------------------------------------------------------S-S-----S-----------------
---------------------------------------S---------------------------S---S--------
------------S------------------------------------S--S---------------------------
-------------------S------------------------------S------S----S-----------------
--------------S--S--------------------------------------------------------------
-S---------------SS------------------------S-------------S-----S----------------
------------------------------------------------------S-S----------S------------
---------------------------------------------------S-----------S---S------------
S-S------------------------------SS---------------------------------------------
------S-----------------------S------S--S---------------------------------------
--------------------------------------------S-----------------------------------
------------S-------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-------------S---------------------------------------S-----------S--------------
------------------------S------------------S-----------------------S------------
-------------------------------------------S----------------------S-------------
----------------------------------------------------------------------------SS--
------------------------------S-----------------------------S-----------S------S
-------S------------------------S-----------------------------------------------
---SS----------------------------------------------------------------------S---S
-S----------------------------------------------SS------------------------------
-------------------------------------------------------------------
>forward_427
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-------AACGCTACTGCCAATTCGGA-----------------------------------------------------
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>reverse_3014
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-----------------------------------------------------ATCGAGGAGGTCATGGACGT-------
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-------------------------------------------------------------------
