>input_sequence_75036
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-----------------------------------ATGGATCGGCAGTCGGAGCGGCTGCTTCTCCTGCGCGTGTACGCG
TTCCTCAAGTCGAGGAAACTCAACCGCGCGGCGTACGCGCTGGAGCAGGAGGCGCGCCTCCGGTTCGACTGGCCCCGCGT
GCACCTCATGATCCGGTGCGGGCGGTGGCGATCGGCGGACGAGTACACGTCGGCGTTCCTGGACGGCGGCAGGGCCAGCA
CCCCGGAGGCCTGCGCCGCCCTGTTCCTCCTCAGGTTCCAGCGCTTCGTGCGCGCGC--TCAGGCGCGGCGACGAGGCGT
GGGCGGGGCGGTACCTGGCGCGCCGCATCCTGCCCGTCCTGCATGCCCACCCCGACAGAGACGCCGCCGCGGCCAGGTGC
GCCGCGGTGCTGCGCGACAGGCGCGCCCTCGCCGCGCAGCGCGACGATGCCGAAGCGCGACGCGCCTGCAACCACGAGTT
CCTCGGCCTCATCTTCCAGAACGATGGGTTCTTGATCCTCACCGACGACGACACCGAGCTAAAGCGCCTCGAGCGGGCGG
CCTCCCTTGGCCTCCGACGATACGCACGCCCGCGCCGCGGCCGACCTAGGGCTAGGAGGGCTTGA---------------
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>chr5D_1_TraesCS5D01G185000
AAAAA-TGTATGTGACATTTTATGGAAATATTCTCATGTTTCCAGAAAATGTTTGTGACATTTTAAAAAATGCTATATAT
AATTTAAAGAAATTTTCGTGTAGGTTAAAAAATTGCTTATTTCTATTAAAATG---CATGGAATTTTAAATAAATGATCA
CGCGTTTCCAAAAAATATTCGGGATTTATTTTTAAAAAATGTTTGTGCAATGCGAAAAGAATGTTTGTGTAGTTTAAGAA
TATGTTTATTGACATTAAAAATGTAAAACGAGTATTTGGAAAATGCTACAGTATATTCAAAACATGTATTTTAGAAAAGG
TACATCATGTATTCATAAAATGTCCAACTTGTATTAAAAAATGTTTCACGTGTGCTCTAAAAATGTTAGTTTTGTACTGA
GAAAAAGAAGAGATGTGTTGAGAAAA-GAAACAAAATAAAAACCAAAAATGAAAGTAAACCAGAAAGAAATAAAGAAAAC
AAAATTATAGCGAAGGAAAAATTACAAAACAATGAGAAAACAAAGGAAACCAAAGTAAAATAAAAAACAAAAAAACTCGG
TGAAAAACTGAAGAAAAAAGAAAAGAAAAAACAAAGTAAACCGGTCGAGCGAACTTGCAGCGACCGCTACGAGCGGGAGC
AACCAACCGCGCTAAATCAGCTAGCCCGTTAGTGGTCGCCCCTAGGCGATTATGTCG--------------GGGACACAT
CTGTCGCGAAGTTTAGCCCTCCCGCGTAAGAAGAAACGTGAAATGACACTTCGTCGAGTCCATCAGCTCACCAACGGCTC
GGACATCGGAACGGCAGTTGTGGCGATGAGAACCCAAGTCGGAATCGGCGGCTCCAATCTATAAAAGCATAGGGCGCTAG
TTGTCCTGACGCAAGAACCAAGCAAACTACTCGTCTCGATTGATCGTCAAACTAAACAACAGCAGATAGGAGGAGGAGAG
AGAGAGAGAGAGAGAGAGAGACGCATCATATCAAACTTAGA---------------------------------------
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-----------------ATTGATAGCTTCGTGTGCATGGATCGGCAGTCGGAGCGGCTGCTTCTCCTGCGCGTGTACGCG
TTCCTCAAGTCGAGGAAACTCAACCGCGCGGCGTACGCGCTGGAGCAGGAGGCGCGCCTCCGGTTCGACTGGCCCCGCGT
GCACCTCATGATCCGGTGCGGGCGGTGGCGATCGGCGGACGAGTACACGTCGGCGTTCCTGGACGGCGGCAGGGCCAGCA
CCCCGGAGGCCTGCGCCGCCCTGTTCCTCCTCAGGTTCCAGCGCTTCGTGCGCGCGC--TCAGGCGCGGCGACGAGGCGT
GGGCGGGGCGGTACCTGGCGCGCCGCATCCTGCCCGTCCTGCATGCCCACCCCGACAGAGACGCCGCCGCGGCCAGGTGC
GCCGCGGTGCTGCGCGACAGGCGCGCCCTCGCCGCGCAGCGCGACGATGCCGAAGCGCGACGCGCCTGCAACCACGAGTT
CCTCGGCCTCATCTTCCAGAACGATGGGTTCTTGATCCTCACCGACGACGACACCGAGCTAAAGCGCCTCGAGCGGGCGG
CCTCCCTTGGCCTCCGACGATACGCACGCCCGCGCCGCGGCCGACCTAGGGCTAGGAGGGCTTGAACATGCATTGGGT--
---------ACGGTCATTGAGATTTGAGAATTATCCAGCAAGCGCGGGCAATGTTCGTGCAGCAACGTGTAGTTGGATGT
TCGAATTCTAAAGAGACTAGATCATTGATGGCGCGCGTTGCTGCGCCCGTCCATTTTGATAATAGAATAATAGAAATTTG
CCTAAATATGTCGATCCACAAAGCATATAAGTTAAATTTATATAAACTTACATACATTTTGGATGCGGGTTTTTTTGTTT
TATAAACAAAAAACCCACATTTACGCAGAGTGATTAGTATTATTACTTCTTTAAACTATCATATTAGGGGAGTAAGAGAT
GCAAACTACCAACAATTGCATAAAAGGACAAGTAATATTCAACATTAGTCAGGGATTGATGTGATACATTAAATCTGGAA
CAGAAAATTATACTATGTACAATCAGGGCACAAATTTACAAAGGAAGAAATTAAAGAATGCTTGCATATCTGCTTTATTG
CCTAGTTGGTTTATTACTAAAAGCAATGATGATCGACGTATGCCGCCTATCATGGTTCAAGAACCATGCATATAAACTCT
GTTCCCTGTGCTTTTAGCTAATTCATTTTGATTT-GTTCAACTAATTTTGAACTGCTGATAGCACTGGAAAGAACAAAAA
GCAAAACCAAGAGTTATTAGTCATAAAAGTACCAAGAACTTATCAAAGAAAAAAATC-TTTATATGATGAGAATAGAGCT
CATGCCGAATAGCTCAAGGGATGCATCTGCCTTGCCAATCTCCTACAGTACAGTTGACGGGAAATTTTGAGCACTTAAAA
ATAAAAATATAGAGCAATGAATAG-------CTAGTAGTGCCAAAATACTGTAGATACATAAAAAGAGATTGATTCCCTA
TTGTATACTACAGCAATCTCTGTCACAGAAACTAAATCTAGATTATATAATAATCTGCCAAGCAATATTGACACATATTG
AGTATTTCAGACTACAGATGTACATGTAGATTGGGTTTAGTGTAG
>chr5A_1
AAACAATGTATGTGACATTTCATGGAAATATTCCCGTGTTTCCAGAAAATGTTTGTGACATTTTTT-AAATGCTATATAT
AATTTAAAGAAATGTGTTGAAAAA--------------------------------------------------------
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--------------------AGAAAA-GAAAATTGATAAAATCCGAAAAAGAAACAAAATGTTGGGAA------------
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-----------TGGCAGTTGTGGCGATGAGAACCCAAGTCGGAATCGGCGGCCCCAATCTATATCAGCATAGGGCGCTGG
TTGCCCTGATGCACGAACCAAACAAACTACTCGTCTCGCTTGATCGTCAAACTTAATAACAGCAGATAGAAGAGGAG---
-GAGAGAGAGAGAGAGAGACACGCATCATATCAAACTTAC----------------------------------------
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----------------GATTGACCGCGCCCTGTGCATGGATCGGCACTCGGAGCGTCTGCTTCTCCTGCGCGTGTACGCG
TTCCTCAAGTCGAGGAAACTCAACCGCGCGGCGAACGCGCTGGAGCAGGAGGCGCGGCTCCGGTTCGACTGGCCCCGCGT
GCACCTCATGATCCGGGCCGGGCGGTGGCGGTCGGCGGAAGAGTACACGTCGGCGTTCCTGGACGGCGGCAGGGCCAGCA
CGCCGGAGGCCTGCGCCACCCTGTTCCTCCTCCGGTTCCAGCGCTTCGTGCGCGCGC--TCAAGCGCGGCGACGAGGCGT
GGGCGGAGCGGTACCTGGCGCGCCGCATCCTGCCCGTCCTGCATGCCCACCCCGACAGAGACGCCGCCGCGGCCAGATGC
GCCGCCGTGCTGCGCGACAGGCGCGCCCTCGACGCGCAGCGTGACGATGCCGAAGCGCGGCGCGCCTGCAACCACGAGTT
CCTCGGCCTCATATTCCAGAACGATGGGTTCTTGATCCTCACCGACGACGACACCGAGCTAAAGCGCCTCGAGCGGGCGG
CCTCCCTTGGTCTCCGACGATACGCACGCCCGCGCCGCGGCCGACCTAGGGCTAGGAGGGGTTGAACATGCATTGGGT--
---------TCAGTCATTGAGATTTGAGAAACATCCGGCAAGCGCGGGCAATGTTCGTGCAGATGCATGTACTTAGATGT
TCGAATTCTAAGAG------------------------------------------------------------------
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>chr5B_1
AAACAATGTATGTGACATTTTATGGAAATATTCCCGTGTTTCCGGAAGTTGTTTGTCACACTATCGAAATTATTATATAC
AATGTAAAGAAATGCTCGTGTAGGTTAAAAAAATGTTTATTTGCATTAAAAATGCACATGAAATTTTAAAAAAA--ATAA
GGCGTTTCCAGAAAATATCCAACAT---TTTTTCAAAAATGTTTGTGCAATGCAAAAA--ATGTTTGTGTAGTTTAAGAA
TATGTTTATTTCCATTAAAAATGAAAAATGTGTATTTGGAAAATGCTAACGTGTATTCAAAAACATGTATTTAAAAAAGG
TACATCATGTATTCATAAAATGCCCAATGTGTATTAAAAAATGTTTCACGTGTGCTCTAAAAATGTTTGTTTTGTACTGA
GAAAAAGTAGACATGTGTTGAGAAAAAGAAACAAAATAAAAACCAAAAAAGGAAGTAAACCACAAA-AGAAATAAAAAAA
CAAATTATAGCAAA-GAAAAAATACAAAACAATAAGAAAACAAAGGAAACCGAAGTAAAATGAAAAAACAAAAAAATTGG
TGAAAACTAAAG--AAAAAGAAAAGAAAAGCTGAAGC------------------TGCAGCGACCGCTACGAGCGGGAGC
AATAAACGGCGCTAAACCAGCCAGCTCGTTAGTAGTCGCCCTTAGGTGATTCCTGTTAGGTATCGGTGTGAGGGACACAG
CTGTCGCGAAGTTTAGATCTCCCGCGTAAGAAGAAACGCGAGATGTCACTTCATCGAGTCCATCAGCTCACCAACGGTTC
GGACTTCGGAGTGGCAGTTGTAGCGATGAGAACCCAAGTCGGAATCGGCGACTCCAATGTATAAAAGCATAGGGCGCTAG
TTGCCTTGACGCAAGAACCAAGCAAACTACTCATCTCGCTTGATCGTCAAACTTAATAACAACAGATAGGAGAGGAA---
-GAG-------GAGAGAGAGACGCATCATATCAAACTTAAGCCCAGTTCTTTTGCCTGAATCTGGAAATTCTCCCAGAAT
CTAATTAGATAGGATTGTAAAAATACGAGGCTCAGAGATTCTGACGGTCGGATTCTGGGAGAATCCCCATATTCTGGCAA
AAGAACTGGGCTTTAGGATTGATCGCGCCCTGTGCATGGATCGGCAGTCGGAGCGGCTGCTTCTCCTGCGCGTGTACCCG
TTCCTCAA------------------------------------------------------------------------
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>chr5B_1049
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---CTCGAGTTGAGGAAACTCAGCCGCGCGGCATACGCACTGGAGCAGGAGGCGCGGCTCCGGTTCGACTGGACCCGCGT
GCACCTCATGATCTGGGGAGGGCGGTGGCGATCGGCGGACGAGTACACGTCGGCGTTCCTGGACGGCGGCAGGGCCAGCA
CGCCAGAGGCCTATGCCACCCTGTTCATCCTCAGGTTCCAGCGCTTCGTGCGCGCGCGCTCAAGCGCGGCGACGAGGCAT
GCGCGGGGCGGTACCTGGCGCATCGCATCCTGCCCGTCCTGCACGCCCATCCCGACCGAGATGCCCCCGCGGCCAGATGA
GTCGCGGTGCTGCGCGACAGGCGTTCCCTCGACGCGCATCGCGACGATGCCGAAGCGCGTCGCGCCTGCAACCTTGAGTT
CCTCGGCAGCATCTTCCAGAACGATGGGTTCTTAATCCTCACCGACGACGACATCGAGCTGAAGCGCCTCGAGAGGGCGG
CCTCCTTTTGCCTCTGACGACACGCACGCCCACGTTGCAACCCACCTAGGGCTAGGAGGGGTTGAACATGCTACATGCAT
TGGGTACGGTCAGTCATTGAGATTTGAGAATCATCCAGCAAGCGCAGACAATGTTCATGCAGCTGCGTGCACTTAAATGT
TTGAATTGTAAGAG------------------------------------------------------------------
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>chr2B_1688
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---------------ACTAGATCATTGATGCCGCGCGTTGCTGCGCCCGTTCATTTTGGTAATAGAATAATAGAAATTTG
CCTAAATATGTCGATCCACAAAACATATAAGTTAAATTTATATAAACTTACATACATTTTGGATGCGGGTTTTTTTGTTT
GAAAAACAAAAAACCCACATTTACGCAGAGTGATTAGTATTATTACTTCTTTAAATTATCATATCAGGGGAGTAAGAGAT
GCAAACTACCAACAATTGCATAAAAGGACAAGTAATTTTCAACATTAGTCAAGGATTGATGTGATACATTAAATCTGGAA
CAGAAAATTATACTATGTACAATCAGGGCACAAATTTACAAAGGAAGAAATTAAAGAATGCTTGCATATCTGCTTTATTG
CCTAGTTGGTTTATTACTAAAAGCAATGATGATTGACGTATGCCACCTATCATGGTTCAAGAACCATGCATATAAACTCT
GTTCCCTGTGCTTTTAGCTAATTCATTTTGATTTGGTTCAACTAATTTTGAACTGCTGATAGCACTGGAAAGAACAAAAA
GCAAAACCAAGAGTTATTAGTCA--AAAGTACCAAGAACTTATCAAAGAAAAAAAATATTTATATGATGAGAATAGAGCT
GATGCCGAATAGCTCAAGGGCTGTATCTGCCTTGCCAATCTCCTACAGTACAGTTGACAGGAAATTTTGAGCACTT-AAA
ATAAAAAAATAGAGCAATGAATAG-------CTAGTAGTGCCAAAATACTGTAGATAAATAAAAGGAGATTGATTCCCTA
TTGTATACTACAGCAATCTCTGTCACAGAAACTAAATCTAGATTATATAATAATCTGCCGAGCAATATTGACACATATTG
AGTATTTCAGACTACAGATGTACATGTAGATTTGGTTTAGTGTAG
>chr7B_1688
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---------------ACTAGATCATTGATGGCGCGCGTTGCTGCGCCCGTCCATTTTGTTAATAGAATAACAGAAATTTG
CCTAAATTTGTCGAT-CACAAAACATATAAGTTAAATTTATATAAACTTACATACACTTTGGATGTGGTTTTTTTTGTTT
TATAAACAAAAAACTCACATTTAGGCAGAGTGATTAGTATTATTACTTCTTTAAATTATCAAATTAGGGGAGTAAGAGAT
GCAAACTACCAACAATTGCATAAAAGGACAAGTAATATTCAACATTAGTCAGGGATTGATGTGATACATTAAATCTGGAA
CAGAAAATTATAGTATGTACAATCAGGGCACAAATTTACAAAGGAAGAAATTAAAGAATGCTTGCATATCTGCTTTATTG
CCTAGTTGGTTTATTACTAAAAGCAATGATGATTGACGTATGCCGCCTATAATGGTTCAAGAACCATGCATATAAACTTT
GTTTCCTGTGCTTTTAGCTATTTCATTTTGATTTGGTTCAACTAATTTTGAACTGCTGATAGCACTGGAAAGAACAAAAA
GCAAAATCAAGAGTTATTAGTCA--AAAGTACCAAGAAATTATCAAAGA-AAAAAATCTTTATATGATGAGAATAGAGCT
CATGCCGAATAGCTCAAGGGCTGTATCTCCCTTGCCAATCTCCTACAGTACAGTTGACAGGAAAATTTGAGCACTTAAAA
ATAAAAAAATAGAGCAATGAATAGCTAGTGCCTAGTAGTGCCAAAATACTGTAGATAAATAAAAAGAGATTGATTCCCTA
TTGTATACTACAGCAATCTCTGTCACAGAAACTAAATCTAGATTATGTAATAATCTGCCGAGCAATATTGACACATATTG
AGTATTTCAGACTACAGATGTACATGTAGATTTGGTTTAGTGTAG
>SNPs
---S-----------------------------S-S----------------------------SS--------------
-------------S------------------S--S------SS-------SS-------S---------S---SS--S-
S---------S-------S-SSS--SSS-----S-------------------S----SS--------------------
----------SS-----------S----S-S-----------------SS--S---------SSSSSSS----S------
----------------------S----SS--------------------------------------S------------
-------S---S-------------------------------------S------------S---S-S-S-S-S----S
S----------S--S------S-----------S-----------------S---------S-----SS------S-S--
------SSSS-SSS---------------SSSS---SSSSSSSSSSSSSSSSSSS-------------------------
--SS---S--------S----S---S-------S-------S----S----SSSSSS----------------------S
----------------SS--------------------S--S---S------S------------------------S--
----S-----SS--------------------------------------------------------------------
---S----------------------------------S--------------S--S---------------SS-S-SSS
S--------------------------------------SS---------------------------------------
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-----------------------S--SS-S--------------------------------------------------
--------------------------------------------------------S-----------------------
----------------S---------------------------------------------------------------
-S---------------S--------------------------------------------S-----------------
----------------------------------------------------------------------------S---
-------------------------------S---------------------------S--------------------
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------------------------------------------------------------S-------------------
---------S-S-------------------S-------------------------------SS------S--S-----
-----------SSSS-------------------------------------------S---------------------
----------------------S---------------------------------------------------------
-------------------------------------------------------S------------------------
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---------------------------------S----------------------------------------------
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-----------------------SS------------------------------SS-----------------------
--------------------S--S----------------------------------S---------------------
-------S-------------------------------------------------S----------------------
-----------------------------------------------------------S--------------------
--------------------------------S------------
>forward_612
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--------------------------------AAAGTAAACCGGTCGAGCGA----------------------------
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>reverse_2501
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--------------------ATGCATCTGCCTTGCCAATC----------------------------------------
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