>input_sequence_75021
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--------ATGTGTGCGAGAGAGAATGGAGATAGAATTTTTATAGAGGGCATTGGATGGGATTGCTTTTACTACGACTAT
GATATAAGAAGAGGAGACACGATACATTTTCGCTACAACTATAAAGATTTATTGATGTATATGTCCCCAATACATCCAAA
TGGTGAACCAAAGGTTATAATTAGTAAGTACATACTGTTTTAT-ATTAGTTA-TTTATTTGGTAATATTTT--GATAATT
AACAATTGTTTAA-TTTTTAAAATTCATAAAGCCGATGTATTTGACGAAGAAGAAAGACCTGTTGCATACGACAATGGGT
TTAATCTAATACAAA----------GGCAAGTCAACAACATGCGTACTTTAGTACAGACTTATGAGGACTATCCTGCGCA
GGTCCATT---GCTTTACAACTGCCAACATATATGGTAATTATTTGGTAAGTAAAATACAATATGTAAAACGCAATCTCA
TCACTTCACATTTTAATAATAT----TAATTGT------TTTTAAATGCAGGTAATACATAGACCAATA-----------
-----------GTTGGGAGCCTTGGTCTACAACAATATGGTTTACTTTTACT-GGAAATGAGCCGGCAAACACACCAATC
AACATAA-------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G171800
AATGGGCAAGTGGACCACACACATGAACTCGACCCTTCCCCAACAAGGGATGCGCTGAGCATGATAAAAAGAAAAAAAAG
ATATTAGATAATTGTGGGCACA----ACATTATGAAATGACAAGTCATAGCACAAAATGAATG--------------CTT
CACAAAGTCGTTGTGAAGATCTACACAAATTTCTTTGCAAGTGACCTTAACCTTGTAACATGCACCTAGCCTTTTGTCAC
CACACCAGGGGCATGCTTCGTTCATCGTCTACCATTTTTAGTTAATATATTTTAAACCACATAACACTTTTTTAGT---T
AATATGTGTTAAACCACAAACTTCTTAGT-GCAAATATTCTCACTA-A-AATAGAAAGAACTAACAATTGCAAACATTCT
TACTA---TGAATAGCACGTAGCATACTGTCGCCACACCAGGGGCATGCATGCTTCGTTCATTGCTGAGACTTCCGTATG
CTAAATAAATGGTAAATCACACAACCTATTTTTGTTAGAACCACACATAATCCTATATGCCTAACTATAAAT--AGAGGC
AACAAAATTGTGCATACTGAGAGGTAAGATTGTATCACACAGATTGGTTGCTTGCCTTCT--ATCAAGAAAAATTCACGA
GTACTCCAAGGTAACATATTTAATTTATATTTTGTATGTACTAAACTAATATTTGATGTGTTCTAACAAAGTTGAATTTA
ACTATTTCAGGTTCAAATGGCTAACGTCTGCGACATTTGTGGTATTGGTGTAATACCGTGCACCTTA--GATCATGAACA
AGTAC--CATA--ATTCTGGGCGATAGTTCCAGAGAATCATCGTTATGGGATTGTGAGTCAAC---------AT-TTGTT
G-GTTTGTAATGTGATATGTAACTGTATTATATATCAAATTGCAAAGTAACTTACTACGTACACTAATTATGTATAGAAT
TGTACTTTGCCGAGGCATTTAGCCATTTAGGTACTACATCGAGCAACAATATTTCACAGTGAAGACTTCTCACGGATCTG
GCTACAGGATGTGTGCGAGAGAGAATGGAGATAGAATTTTTATAGAGGGCATTGGATGGGATTGCTTTTACTACGACTAT
GATATAAGAAGAGGAGACACGATACATTTTCGCTACAACTATAAAGATTTATTGATGTATATGTCCCCAATACATCCAAA
TGGTGAACCAAAGGTTATAATTAGTAAGTACATACTGTTTTAT-ATTAGTTA-TTTATTTGGTAATATTTT--GATAATT
AACAATTGTTTAA-TTTTTAAAATTCATAAAGCCGATGTATTTGACGAAGAAGAAAGACCTGTTGCATACGACAATGGGT
TTAATCTAATACAAA----------GGCAAGTCAACAACATGCGTACTTTAGTACAGACTTATGAGGACTATCCTGCGCA
GGTCCATT---GCTTTACAACTGCCAACATATATGGTAATTATTTGGTAAGTAAAATACAATATGTAAAACGCAATCTCA
TCACTTCACATTTTAATAATAT----TAATTGT------TTTTAAATGCAGGTAATACATAGACCAATA-----------
-----------GTTGGGAGCCTTGGTCTACAACAATATGGTTTACTTTTACT-GGAAATGAGCCGGCAAACACACCAATC
AACATAAGTTGATTATCATATTAAAAGAGATGCCTATCTCAAAATTAACGGTCCTGCATGGAGTAATTTTGTAAGTCAAC
ATGAGATATATGTTGACGTGTGTGTAGTAATACTTGTTATTCCTGAAAACAATAGGCAGGAAGTGACGTTGAGATTCAAA
CCTATTACACCAGTTGGAAGGCAAATATTAAGTTCCGATGAAGATTCTGATTCAAAAGATGAAGACTAGGACCATTGT-T
TTTT--AGATATGTCTTAGAATAAG---TTT-TTTTAACTATGTATTACAATGATTTATAATATTTT-------------
--------------------------------------TATAATAGGTTCTTGTTTTAA-CTAAGTATTACAATGATTTA
TATAA-TTTTTTAAAGTGTGCGTTACAATGATTCATATTTCTTTTTA-GAGTATGGTTTCTACACAAACCAATAATACAA
AGTATACATGG---AAAAAATTGGGCATGACTTATGCTAAAA-AGTGAAAACATTTAGTGTCCAAAATGTTACGAAACGG
AAATTAATCAATGTTTTGTGATATTTTAGACACTCCTTCGAAGGCATGTTAATCAATTCATCTACAATCTATATTTTTTT
GACT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGTCATCTACAATCTATATTGACGTGCATATAAACA
TCAGCATTAATCTATAATCTAACTTGAATCAAATTTA---ATTATCTACACACTGCTCGAGCGCGAGGCGGACAGGGGAT
CAGTGTCCTTAGCTGAGGGGGAGTTGGTTGCCAGCGGCGGTGACACCCCCCCGCTGCTGGCGGAGGCCATCACATTCGGG
GATGAGGACGGCCTCGGCTAACGAAGACGACCGCGGCAAGGGGGCCGCGATAGAGGACAGGGAACCCAAGGACGAGGGTT
GCCGTGGCGAGGGGATGGGCGCGACGGAGGAGGAGGACCCCGGTGGACGAGGGCTGCCACGGTGAGGGGGGCACGACGGA
GGAGGGCAGGCGCGGTGAAGGATGGGAGCGGCAACGAGGGGAGCGCGTGATGACCCACAAGTATAGGGGATCAAT
>chr1B_2
-ATGGGCAAGGGGACCACACACATAAACTCGGCCCTTCCCCAACAAGGGATACGCTGAGCATGATAGACAG--AAAAAAG
ATATTAGACAATTGTGGGCACATGCAACATTATGAAATGACAAGCTATAACACAAATTGAATGAAACATACCGCTCACTT
CATAAAGTCATCATGAATATCTACACAGATTTCTTTGCAAGTGACCTCAACCTTGTAACATGCACCTAGCCTCGGGTTGC
CACACCAGGGGCATGCTTCGTTCATTGCCTATCATTTTTAGTTAATATATGTTAA-CCACATAATCCATTTTTAGTAAAT
ACTATATGTTAAAACACAAACTTTTTAGCCCCAAACTGTCTCACTACA-AATAGAATGAACTAATAGCTACAAAAATTCT
CACTTAATTAAATAGCAGATAGCCTACTGTCCCCACACCAGGGGCATGGATGCTTCGTTCATTGCGGAGACATCCGTATG
ACAAGTAAATGGTAAACCACACAACCTATTTTCATTAGAACCACACATAATCCTATATGCCTAATTATAAAT--AGAGGC
AACAAAGCTACGCATAGTGAGACGTAACATTGTATCACACAAATTGGTTGCTTGCTTTCT--ATCAAGAAAAATTCACGA
GTACTCCAAGATAATATATTTACTTTATATTTTGTATGTACTAAACTAATATTCGATTTGTTCTAACAAAGTTGAATGTA
ACTATTTCAGATTTAAATGGCTAACATCTGTGATATTTGTGGTACTGGTGTAATACCGTGCACCTTA--GATCATGAACA
AGTGG--CACA--ATTCTGGGCGATAGTTCCAGAAAGTCATCGTTATGGGATTGTGAGTCAAC---------AT-TTTTT
G-GTTTGCTATGTGATATGTAACTGTATTATATATGAAATTGAGGTGTAACTAACTACTTACACTAATTATGTATAGGAT
-GTACCTTGCCGAGGCGTTAAGCAATTTAGGTACTACATCGAGCAACACTATTTCACAGCCGAGACTTCCCATAGATCAA
GCTACAGGATGTGTGCAAGAGATAATGGAGATAGAATTCGTATAGGTGGCATTGGATGGGATTGCTTTTGCTACGACTAC
GATATAAGAAGAGGAGACACGATACATTTTCGCTACAACTGTAGAGATTTTGTGATGTATATGTCCCCAATACATCCAAA
TGGTGAACCAAAGGATATAACTAGTAAGTACATGTTGTTTTAT-ATTAGTTA-TTT-T-TAGTAATATTTT--TATACTT
AACATTTTTTTAA--TTTTTTAATTCATAAAGCTGACGTATTTGACGAAGGAGAAAGACCTGTTGCACACAGCAACGAGT
TTAATCTAACACAAA----------GGCAAGTCAACAACATGCACACTATATTACAGACATATGATGACTATCCTGCGCA
GATCCATT---GCTTTACGGCTGCGAACATGTATGATAATCATTTGGTAAGTAATATACAATATGTAAAATGCAATCACA
TCACTTCGCATTTTAATAAA----------TGT------TTTTCAATGCAGGTAATACATAGACCAATA-----------
-----------GTTGGGAGCATTGGTCTACAACAATATGGTTCAATTTTACT-GCAAATGAGCCGGCAAACACACCAATC
AATAGAAGTTGATTATCATATTAAAAGAGATGGCCGTCTCGAAATTAACGGTCCCGCATGGAGTAATTTTATAAGTCAAC
ATGAGATAGATGTTGAGGGGTGGGTAGTAATACTTGCTATTCCTGGAAACAATAGGCAAGAAGTGACGTTGAGATTCAAA
TCTATTACACCAGTTGGAAGGCAAGTATTAAGTTCTGATGAAGATTCTGATTCAGAAGATGAAGACTAGGACCATTGTAT
TTTT--AGATATTTTTTAGAATAAG---TACATTTGAACTATGTATTACAATGATTTATATAATTTT-------------
--------------------------------------TAGAATAAGTTGTTTTTTTAA-TTATATATTACAATGATTT-
--------TTTTAGAGTTTGTATTACAATGATTCATATTTATTTTTA-GAGTATGTGTTCTACATCAACAGATAATACAT
AGTATGGATGAGCAAATTTTTTGGGCATGACTTCTGCTAAAG-AATGAAAACATTGAGTGTCAAAAATGTTACGAAACTG
AAGTTAAGCAACGTTTCATGATATTTTAGACACTCCTTTGAAGCCCTGTTAATCAACATTTATATTGAGGTGGTTCATTA
AAATCTCTTGGCAAAGGGTGCCAATTTCGTCTGGGCCATGGCAGAGCCAGACGGCCGTGCGAGTAGATGATCTACCTATC
TGTACTAAAGCATGAGCTACATTATTTTGGATTCTCCGAATATGTGCTATAGAATAATCACGTCCAGACTTAAGTAGTTG
TTTCCCTTCCTCAACTAACGCAGCCACTTGAGATCTATTTGGCGTGTCATCTACAATCTATATTGACGTGCATATAAATA
CCAACATTAATCTACAATCTATAATGGATAAAATATA---A---CCTGCACGCTGCTTGAGCGCGAGGCGGACAAGGGAT
CGATGACCTCGTCTGATGAGGAGTTGGCTGGCGGCGGCGGTGTCAGCCCCTCGCTGCCGGCGGAGGCCATCGTGTTCGGG
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_301
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-ATATATGCTAAACCACAAACTTTTTAGCCGCAAACATTCTCACTATAAAAAAGAGGGAACTAATAGTCGCAAACATTCT
CAGTA---TAAATAGCACGTAGCCTACTGTCGCCAAACCAGAGGCATGCATGCTCCGTTCATTGCCGAGACTTCTGTATG
TTAAATAAATGGTAAACCACACAACCGCTTTTTGTTAGAACCACACATAATCCTATATGCCTAACTATAAAT--AGAGGC
AACAAAGCAACACATAGTGAGAGGTAAGATTGTATCACACAGATTGGTTGCTTGCCTTCT--ATCAAGAAAAAATCATGA
GTACTCCAAGGTAACATATTTACTTTATATTTTGTATGCACTAAACTAAGATGAGATGTGTTCTAACATAGTTCAATGTA
ACTATTTCTGGTTCAAATGGCTGCAGTCTGCGACATTTGTGGTACGGGTGTAATACCGTGCACCTTA--GATCATGAGCA
AATCG--CACA--ATTTTGGGCGATAGTTCCAAACTCTCATCGTTATGGGATTGTGAGTCAAC---------AT-TTTTT
G-GTTTGTAATGTGATATGTAACTGTATTATATATCTAAATAAGGTGTAACTTACCACATACACTAATTATGAATAGAAT
-GTACT--------------------------------------------------------------------------
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>chr5D_306
--------------------------------------------------------------------------------
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------TGTTAAACCACATACTTTTTAGCCGCAAATATTCTCGCTATA-AATAGAAGGAACTAATAGCTGCAAACATTCT
CACTA---TAAATAGCACGTAGCCTATTGTCGCCACACCAGGGGCATGCATACTTCGTTCATTGCCAAGACTTTCGTATT
CTAAATAAATGGTATACCACAAAACCTATTTTTGTTAGAACCACACATAATCCTATAGGCCTAACTATAAAT--AGAGGC
AACAAAGCTGCGCATAGCGAGAGGTAAGATTGTATCACACATATTGGTTGCTTGCCTTCT--ATCAAGAAACATTCACGA
GGACTCCAAGGTAACATATTTACTTTATATTGTGTATGTAGTAAACTAATATTTGATGTGTTCTAACAAAGTTGAATGTA
ACTATTTCAGGTTCAAATGGCTAATGTCTGTGACATTTGTGGTACTGGTGTAATACTGTGAACCTTA--TATCATGGACA
AGTAC--CAAA--ATTCTGGGCGATAGTTCCAGACAGTCGTCGTTATGGGATTGTGAGTCAAC---------AA-TTTTT
TTGTTTGTAATATGATATGTAACTGTATTATATATCAAATTGAGGATTAACTTACTACGTACACTAATTATGTATAGAAT
-GTACCTTCCTAAGACGTTAAGCAGTTTAGGTACTACATCGAGCAACGATATTTCACAGCCGAGACTTCTCATGGATCTA
GCTAGAGGATGTGTGCGAGAGACAATGGAGATAGAATTTGTATAGAGGGCATTGGATGAGATTGCTTTTGCTACGACTAC
GATATAAGAAGGGGATACACGATACATTTTTGCTACAACTGTAGAGATACTGTGATGTATATATCGCCAATACATCCAGA
TGGTGAACCAAAGGATATAATTAGTAAGTACATATTATTTTAT-GTTACTTA-TTTCTTTAGTAATAATTTTTTATAATT
AACAATTGTTCAA-TTTTTAAAATTCATAAAGATGACGTATTTGACGAAGGAGAAAGACCTGTTGCGTACAACAATAAGT
TTAACTGAACACAAA----------GGCAAGTCGACAACATGCACACTTTATTGCAGATGTATGCGGACTATCCTGCGAA
GATCCATT---TCTTTGCAACTGCCAACATATATGGTAATCATTGGGTAAGTAAAATACAATAT--------------CA
CCACTTCACATTTTAATAAAAT----TTATTCT------TTTTTAATGCATGTAATATATAGACCAATA-----------
-----------GTTGGGAGGCTTGGTCTACAACAATATGGTTCACTTTTACT-GAAA-TAAGCAGGCAAACACAGCAATC
AATAGAAGTTGATTATCATTCTAAAAGAGATGGCCGTCTCGAAATTAATGGTCCTGCATGGAGTAATTTTGTAAGTCAAC
ATGAGATATATGTTGATGTGTGGGTAGTAATACTTGTTATTCCTGGAAACAATAGGCCAGAAGTGACATTGAGATTCAAA
GCAATAACAATAGTTTAAAGGCAAGTATTAAGTTCTGATGAAGATTCTGATTCGGAAGATGAAGACTAGAACCATTTTTT
TAT----ATA-TTGTTTAGAATAAGTTC-TT-TTTTAACTATGTATTACAATGATTTATATTT-----------------
---------------------------------TTTTTTAGAATAGGTTC-TTTTTTAA-CTAACTACTACAATTATTTA
TATAA-TTTTTGAGAGTGTGTATTCCAATTATTCATATTTATTTTTA-GAGTATGTGTTCTACATCAACCAATAATACAG
AGTACGTATGGACAAAAAAATTGGGCATGACTTATGCTAAA--AATGAAAACATTCAATGTCCAAAATGTTGCGAAAAGG
AAATTAATCAACTTTTGGCGATACATTAGACACTCCTTTGAAGCCCTGTTAATCAATTCATCTAGAATCTATATTTTTTG
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GTGTCATCTACAATCTATAATGACGTGCATATAAATA
CCATCATTAATCTAAAACCTAACATGAATCAAATTTAATTA---TCTACACACTGCTTGCACGCGAGGCGGA--------
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>chr6D_511
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---------------------------------------------------------TGTCTCACTACAAAT--AGAGAA
CTAATAGCG-CATAGTGAGAGGAGTAGGAT-TTTTTCACAAAATTGGTAACTTGCCGTCT--ATTAAGAAAAACTCAGGA
TTACTTCAAGTTAACATATTTATTTTATATTTTGTGTGTACTAAATTAATATTTGATGTGTTATAACACAATTGGATGGA
ACTTTTTTAGCTTGAAATGGGTAACGTCTGCAATAATTGTACTACTGGTGTAACACCGTGCATCTTA--GATCGTGAATA
AGTATCACACA--ATTCTGTGTGATAGTTCCACAAAATCATCGTTATGGTAATGTGAGTCAACCATTTTTATAT-TTTTT
G-GTTTGTAATGTGATATGTAACTGTATTATACATCAAATTGAGTTGTAACTTACTATGTACACTTATTATGTATAGAAT
-GTACATTGCTGAGGAGTTATGCAATTTAGGCACTACATCAAATAGCGTTATTTCACAGGCGAGACTTCTCACCTATCAA
GCTAAATGATGTATGTAAAAGATAACGGAGATAGGATTAATATAGGTGGCATTGGATGAGATTGGTTTTGCTACAACTAT
GATATAAAAATAGGAGAGAAGATACATTTTCGCTACAACTGTCACCCTTTTGTGATGTATATGTC-CCAATACATCAAGA
CGGTGAACCAATGGATATAATTAGTAAATACATATTGTTTTAAAATTAGTTG-TTT-TTAAGT--TTATTTTTTAAAATT
AACAACTGTTCAA-AATTTTAAATTAATATAGCAGACATATTTGACGAAGGAGAAAGACCTGTTGCATACTGCAATGAGT
TTAATTTTACAGAAA----------G----------AACATGCACACTATATTAGAGACATATGATGAATATCCTACGTG
GGTCCATT---GCTTCACTGCTGCCAACATGTATTAGAATCATTTGGTAAATAATA-ACAATATGTGAAATATAATCTCA
TTACTTCACAATTTAATAAAAACTACTTATTTT------TATTTAAATATAGTAAAACATAGACCAATA-----------
-----------GTTGGCAGGCTTGGTCTCCGACGATATGGTTCAATTTTGTTGGAAA-TGAGCCAGAAAACACACCAATC
AGTAGAAGTTGATTATTAGATTAAGAAAGATGCC----------------------------------------------
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>chr6D_517
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---------------------------------------------------------------ACTACAAATAGAGAGAA
CTAATAGCG-CATAGTGAGAGTGGTAGGATTTTTTTCACAAAATTGGTAACTTGCCGTCT--ATTAAGAAAAAATCAGGA
GTACCTCAAGTTAACATATTTATTTTATATTTTGTATGTACTAAATTAATATTTGATGTGTTATAACACAGTTGGATGTA
ACTTTTTTAGGTTGAAATGGGTAACGTCTGCAATAATTGTACTACTGGTGTAACACCATGCATCTTA--GATCGTGAATA
AGTAT--CACACAATTCTGTGCGATAGTTCCACAAAGTCATCGTTATGGTATTGTGAGTCAACCATTTTTATGTATTTTT
G-GTTTGTAATGTGATATGTAACTGTATTATACATCAAATTGAGTTGTGACTTACTACGCACACTTATTATGTATAGAAT
-GTACATTGCTGAGGAGTTAAGCAATTTAGGCACTACATCAAATAACGTTATTTCACAGGCGAGACTTCTCACCTGTGAA
GCTAAATGATGTATGTAAAAGATAATTGAGATAGGATTAATATAGGTGGCATTGGATGAGATTGCTTTTGCAACAACTAT
GATATAAGAATAGGAGACAAGATACATTTTCGCTACAACTGTCACCCTTTTGTGATGTATATGTCT-CAATACATCAAGA
CGGTGAACCAATGGATATAATTAGTAAATACATATTGTTTTAAAATTAGTTG-TTT-TTAATT--TTATTTTTTAAAATT
AACAACTGTTCAA-AATTTTAAATTAATATAGCAGACATATTTGACGAAGGAGAAAGACCTGTTGCATACTACAATGAGT
TTAATTTAACAGAAAGTCAAGTACAG----------AACATGCACACTATATTAGAGACGTATGATGAATATCCTGCGCG
GGTCCATT---GCTTTACGGTTGCCAACGTGTATTAGAATCATTTGGTAAATAATATACAATATGTGAAATATATTCTCA
TTACTCTACATTTTAA----------------------------------------------------------------
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>chr6D_551
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-------------------AGAGGTAAGAATGTATCACACAAATTGGTTGCTTGCCTTCT--ATCAAGAAAAAATCACGA
GTACTCCAAGGTAACATATTTAATTT------------------------------------------------------
---------------AATGGCTAATGTCTGCGACATTTGTGGTACTAGTGTAATACCGTGCACCTTA--GATCAGGAACA
AGTAC--CACA--ATTCTGAGTGATGGTTCGACACAGTCATCTTTATGGGATTGTGAGTCAAC---------GT-TTTTT
C-GTTTGTAATGTGATATGTAACTGTATTGTATATCAAATTGAGGGGTAACTTACTACGTACACTAATCATGTATAGAAT
-ATACCTTGCCGAGGTGTTAAGCAATTTAGGTACTACATCGAACAACACTATTTCACAGCCGAGACTTCTCACGGATCAA
GCTACAGGATGTGTGCGAGAGATAATGGAGATAGAATTCGTATAAGTGGCTTTGGATGAGATTGCTTTTGCTACGACGAT
GATATAAGAAGAGGAGAAACGATATATTTTTGCTACAACTGTAGAGATTTTGTGATGTATATGTCCCTAATACTTCCAAA
TGGTGAACCAAAGGATATAATTAGTAAGTACATATTGTTTTAT-ATTAGTTT-TTTATTTAGTAATACTTTTATATAATT
AACAATTATTCAA-TTTTTTAAATTCATAAAGATGACGTATTTGACGAAGGAGAAAGACCTGTTGCATAAAGCACCGAGT
TTAATCTAACACAAA----------GGCAAGTCAACAACATGCACACTCTATTATAGACGAATGAGGACTATCCTACGCA
GATCCAAT---GCTTTACAGCTGCGGACATGTCTGATAATCATTTGGTAAGTAATATACAATATGTAAAATGCAATCTCA
TCACTTCACATTTTAATAAA----------ATTTATCCTTTTT---------------------CAATA-----------
-----------GTTGGGAGCCTTGCTCTACAACAATATGGTTCAGTTTTACTGTAAA-TGAGCCGACAACCACAACAATC
AATAGAAGTTGATTATCATATTAAAAGCAATGACCGTCTCAAAATTAACGGTCCTGCGTGGAGTAATTTTGTAAGTCAAC
ATGAGATAGATCTTGAGGGGTGGGTAGTAATACTTGTTATTCCTGAAAACAATAGGCAAGAAATGA-GTTGAGATTCAAA
TCTATTACGCCAGTTGGAAGCCAAGTATTAAGTTCTGATGAAGATTCCCATTCAGAAGATGAAGACTAGCACCATTGTGT
TTTT--AGAT-TTTGTTAGAATAAGTTCTTT-TTTTAACTATGTATTACAATAATTTACATAATTTTGTACAAGAAGTTC
TTTTTTTACTACATATTAAAATTATTTACATAATTTTTTATAATAGGTTC-TTTTTTAAAGTAAGTATTACAATGATTTA
TATAA-TTTTTTAGAGTGCGTATTACAATGATTTATATA---TTTTT-GAGTATGTGTTCTACATCGACCAATAATATAG
AGTATGGATGGACAAAGAATTTGGGCATGACTTCTGCTAAAG-AATGAAAACATTGAGTATCAAAAATATTGCCAAACCG
AAATT----AATGTTTCGTGATATTTTAGACACTC--TTGAAGCCCTGTTAATCAATTCATCTACAATCTATATCTTTTT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr6A_552
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GAGGTAAGAGTGTATCACACAAACTGGTTGCTTGCCTTCT--ATCAAGAAAAATTCACGA
GTACTCCAAGGTAACATATTTACTTTATATTTTGTATGTACTAAACTAATATTTGATGTGTTCTAACACAGTTGAATGTG
ACTATTTTAGGTTCAAATGGCTAATGTCTGCGAGATTTATGGTACTAGTGTAATACCGTGCACCTTA--GCTCATGAACA
AGTAC--CACA--ATTCTGAGTGATGGTTCGACACAGTCATCTTTATGAGATTGTGAGTCAAC---------AT-TTTTC
C-GTTTGTAATGTGATATGTAACTGTATTGTATATCAAATTGCGGTGTAAGTTACTACGTACACTAATTATGTGTAGAAT
-ATACTTTGCCAAGGAGTTAAGCAATTTAGATACTACATCGAACAACGCTATTTCACAGCCGAGACTTCTCATGGATCAA
GCTACAGGATGTGTGTGAGAGATAATGGAGATAGAATTCGTACAAGTGGCATTGGATGAGATTGCTTTTGCTACGACGAC
GATATAAGAAGAGGAGACACGATATATTTTTGCTACAACTGTAGAGATTTTGTGATGTATATGTCCCTAATACTTCCAAA
TGGTGAACCGAAGGATATAATTAGTAAGTACATATTGTTTTTT-ATTAGTTTTTTA-TTTAGTAATACTTTTATATAATT
AACAATTGTTCAA-TTTTTTAAATTCATAAAGATGACGTATTTGACGAAGGAGAAAGACATGTTGCATACAGCAATGAGT
TTAATCTAACACAAA----------GGCAACGCAACAACATGCACACTATATTACAGACGAATGAGGACTATCCTGCGCA
GATCCATTATTGCTTTACAGCTACGGACATGTCTGATAATAATTTGGTAAGTAATATACAGTATGTAAAATGCAATCTCA
TCACTTCACATTTTAATAAA----------TTTTATCCTTTTT---------------------TAATGCTGGTAATACA
TA------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr6A_552
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------GAGGTAAGAGTGTATCACACAAATTGGTTGCTTGCCTTCT--ATCAAGAAAAATTCACGA
GTACTCCAAGGTAACATATTTACTTTATATTTTGTATGTACTAAATTAATATTCGATGTGTTCTAACACAGTTGAATGTA
ACTATTCCGGGTTCAAATGGCTAATGTCTGCGTCGTTTGTGGTACTAGTGTAATACCGTGCACCTTA--GATCATGAACA
AGTAC--CACA--ATTATGAGTGATGGTTCGACACAGTCATCTTTATGGGATTGTGAGTCAAC---------AT-TTTTC
C-GTATGTAATGTGATATGTAACTGTATTGTATATCAAATTGAGGTGTAAGTTACTACGTACACTAATTATGTGTAGAAT
-ATACCTTGCCGAGGCGTTAAGCAATTTAGGTACTACATCGAACAACGCTATTTCACAGGCGAGACTTCTCATGGATCAA
GCTACAGGATGTGTGTGAGAGATAATGGAGATAGAATTCGTATAAGTGGCATTGGATGAGATTGCTTTTGCTACGACGAC
GATATAAGAAGAGGAGACACGATATATTTTTGCTACAACTGTAGAAATTTTGTGATATATATGTCCCTAATACTTCCAAA
TGGTGAACCAGAGGATATAATTAGTAAGTACATATTGTTTTAT-ATTAGTTT-TTA-TTTAGTAATACTTTTATATAATT
AACAATTGTTCAA-TTTTTTAAATTCATAAATATGACGTATTTGTCGAAGGAGAAAGACATGTTGCATACAGCAACGAGT
TTAACCTAACACAAA----------GGCAATGCAACAACATGCACACTATATTACAGACGAATGAGGACTATCCTGCGCA
GATCCATT---GCTTTAAAGCTACAGACATGTCTGGTAATCATTTGGTAAGTAATATACAATATGTAAAATGCAATCTCA
TCACTTCACATTTTAATAAA----------ATTTATCCTTTTT---------------------TAATGCTGGTAATACA
TAGATCAATAGGTTGGGAGCCTTGCTCTACAACAATATGGTTCAGTTTTACTGTAAA-TGAGCCGACAAACACAACAATC
AACAGAAGTTGAATATCATGTTAAAAGACATGACCGTCTCAAAATTAGCTGTCCTTTATGGAGTAATTTTGTAAGTCAAC
ATGAGATAGATGTTGAGGGGTGGGTAGTAATACTTGTTATTCCTGAAAACAATAGGCAAGAAATGA-GTTGATATTCAAA
TCTATTACGCCAGTTGGAAGCCAAGTATTAAGTTCTGATGAAGATTTCGATTCGGAAGATGAAGACTAGAACCATTGATT
TTTTTTAGAT-TTTGTTAGAATAAGTTC-TT-TTTTAACTATGTATTACAATAATTTATATAATTTTGTACAAGAAGTTC
TTTTTTAACTACATATTACAATGATTTATATAATTTTTTAGAATAGGGTC-TTTTTTAAAGTAAGTATTACAATGATTTA
TATAA-TTTT-TAGAGTGCGTATTACAATGATTTATATA---TTTTTTGAGTATGTGTTCTACATCGACCAATAATATAG
AGTATGGATAGCCAAAGAATTTGGGCATGACTTCTGCTAAAG-AATGTAAACTTTGAGTGTCAAAATTGTTGCAAAACAG
AAATTAATCAATGTTTCGTGATATTTTAGACACTCCTTTGAAGCCCTGTTAATCAATTCATCTACAATCTATATGTTTTT
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr6D_552
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GAGGTAAGAATGTATCACACAAATTGGTTGCTTGCCTTCTATATCAATAAAAATTCACGA
GTACTCCAAGGTAACATATTTAATTTATATTTTTTATGTACTAAACTAATATTCGATGTGTTCTAACACAGTTGAATGTA
ACTATTTCAGGTTCAAATGGCTAATGTCTGCGACATTTGTGGTACTAGTGTAATACCGTGCACCTTATAGATCAGGAACA
GGTAC--CACA--ATTCTGAGTGATGGTTCGACACAGTCATCTTTATGGGATTGTGAGTCAAC---------GT-TTTTT
C-GTTTGTAATGTGATATGTAACTGTATTGTATATCAAATTGAGGGGTAACTTACTACGTACACTAATTATGTATAGAAT
-ATACCTTGCCGAGGTGTTAAGCAATTTAGTTACTACATCGAACAACACTATTTCACAGCAGAGACTTCTCATGGATCAA
GCTACAGGATGTGTGCGAGAGATAATGGAGATATAATTCGTATAAGTGGCTTTGGATGAGATTGCTTTTGCTACGACGAC
GATATAAGAAGAGGAGACACGATATATTTTTGCTACAACTATAGAGATTTTGTCATGTATATGTCCCTCATACTTCCAAA
TGGTGAACCAAAGGATATAATTAGTAAGTACATATTGTTTTAT-ATTAGTTT-TTA-TTTAGTAATACTTTTATATAGTT
AACAATTATTCAA-TTTTTTAAATTCATAAAGATGACGTATTTGATGAAGGAGAAAGACCTGTTGCATAAAGCACCGAGT
TTAATCTAACACAAA----------GGCAAGTCAACAACATGCACACTCTATTACAGACGAATGAGGACTATCCTACGCA
GATCCAAT---GCTTTACAGCTGCGGACATGTCTGATAATCATTTGGTAAGTAATATACAATATGTAAAATGCAATCTCA
TCACTTCACATTTTAATAAA----------ATGTTACCTTTTT---------------------GAATA-----------
-----------GTTGGGAGCCTTGCTCTACAACAATATGGTTCTGTTTTACTGTAAA-TGAGCCGACAACCACAACAATC
AATAGAAGTTGATTATCATATTAAAAGAGACGACCGTCTCAAAATTAATGGTCCTGCGTGGAGTAATTTTGTAAGTCAAC
ATGAGATCGATCTTGAGGGGTGGGTAGTAATACTTTTTATTCCTGAAAACAATAGGCAAGAAATGA-GTTGAGATTCAAA
TGTATTACGCCAGTTGGAAGCCAAGTATTAAGTTCTGATGAAGATTCCGATTCAGAAGATGAAGACTAGCACCATTGTTT
TTTT--AGAT-TTTGTTAGAATAAGTTCTTT-TTTTAACTATGTATTACAATAATTTACATAATTTTGTACAAGAAGTTC
TTTTTTTACTACATATTACAATTATTTATATAATTTTTTAGAATAGGCTC-TTTTTTAAAGTAAGTATTACAATGATTTA
TATAA-TTTT-TAGAGTGCGTATTACAATGATTTATATA---TTTTT-GAGT-TGTGTTCTACATCGACCAATAATATAG
AGTATGGATGGACAAAGAATTTGGGCATGACTTCTGCTAAAG-AATGAAAACATTGAGTGTAAAAAATGTTGCCAAACCG
AAATT----AATGTTTCGTGATATTTTAGACACTC--TTGAAGCCCTGTTAATCAATTCATCTACAATCTATATCTTTTT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_924
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-----------GAGGCGTTAAGCAACTTAGGTACTACATCGAGCAACGCTATTTCACAGCCGAGACTTTGCACAGATCAA
GCTACAGGATGTGTGCGAGAGACAATGGAGATAGAATTCGTATAGAGGGCATTGGACGGGATTGATTTTGCTGCGACTAC
GATATAAAAAGAGGAGACACGAAACATTTTCACTACAACTGTAGAGATTTTGTGATGTATATGTCCCCAATACATCCAAA
TGGTGAACCAAAAGGTATAATTTGTAAGTACATATTGTTTTAT-ATTAGTTA-TTT-TTTAGTAATAATTTTTGATAACT
AACAATTGGTCAATTTTTTTAAATTCATAAAGCTGACGTATTTGATGAATGAGAAAGACCTATTGCATACAACAATGAGT
TTAATCTAACACAAA----------GGTAAGTCAACAACATGCACACTATATTACAGATGTATGAGGACTATTCTGCGCA
GGTACATT---GCTTTACAGCTGCGAACATATATGATACTCACTTGGTAAGTACTATACAATATGTAAAATGCAATCTCA
TCACTCCACATTTTAATAAA----------ATTTATTCCTTTTTAATGCAGGTAATACATAGACCAATA-----------
-----------GTTGGGAGCTTTGGTCTACAACAATACAGTTCAATTTTACTGCAAA-TGAGCCGGCAAACACACCAATC
AATAGAAGTTGATTATCAGATTAAAAGAGATG------------------------------------------------
--------------------------------------------------------------------------------
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>chr4A_1806
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----------------------------------------------------------------ACTGGGACCA-TGTTT
TTTA--GATA-TTTTTTAGAATAAGGTATTT-TT----------------------------------------------
------AACTATATATTACAATGATTTATGTAATATTTTAGAATAGGTTC--TTTTTTAACTAAGTATTACGATTATTTA
TATTTCTTTT-TGTAGTACGTATTACAATGATTCATATT---TCTTTCTAGAGTATGTTCTACATCAACCAATAATATGG
AGTATGTATGGACAAAAAATTTGGGCATGAATTATGCTAAAAAAATGAAAACATTGAGTGTCCAAAATGTTGCGAAACGG
TAATTAATAAATGTTTCACAATATTGTAGACACTCTTTTGAAGCCTTGTTAATCAATTCATCTACACTTTATATTATTTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GGCGTGTCATCTACAATCTATATTGACGTGCATATAATCA
CGAACCTGAATCTACAATCTAACATGAATCAAATTTAATTA---CCTGCACACTGCTTGAGCGTGAGGCGGGCGAGGGAT
CGGTGGCCTCGACTGAGGAGGAGTTGGAAGCCGGCGGTGGTGTCAGCCCCCTGCTGCTGGCGGAGGCCATCATGTTCGGG
GA------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr4A_1834
--------------------------------------------------------------------------------
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---------------TTAGAATAAGTTATTT-TT----------------------------------------------
------AACTATGTATTACAATGATTTATGTAATATTTTAGAATAGGTTC--TTTTTTAACTAAGTATTACAATGATTTA
TATTTCTTTT-TGAAGTACGTATTACAATGATTCATATT---TCTTTCTAGAGTATGTTCTACATCAACCAATAATATGG
AGTATGTATGGACAAAAAATTTGGGCATGAATTATGCTA-AAAAATGAAAACATTGAGTGTCCAAAATGTTGCGAAACGG
TAATTAATCAATGTTTCACAATATTGTAGACACTCTTTTGAAGCCTTGTTAATCAATTCATCTACACATTATATTATTTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GGCGTGTCATCTACAATCTATATTGACGTGCATATAATCA
CGAACCTGAATCTATAATCTAACATGAATCAAATTTAGTTA---CCTGCACACTGCTTGAGCGTGAGGCGGGCGAGGGAT
CGGTGGCCTCGACTGAGGAGGAGTTGGAAGCCGGCGGTGGTGTCAGCCCCCCGCTGCTGGCGGAGGCCATCACGTTCGGG
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
S---------S-------------S------S-------------------S--------------S-S--SS-------
--------S-----------------------------------SS---S------S-----------------------
--S------S-SS----S---------S-------------------S------------------------SSS--SS-
-------------------------S-S---S------------------S----S--------SS-S------------
-----S-----------------S----S---------------------------S-------S-S-------------
S--------S-------------S-----------------------------------------S--------------
----------------S---------------------------------------------------------------
------SS--S-----S---------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------S-----------------------------------
---------S------------------------S------------------------------------------S--
-------------------------------------------SS-----------------------------------
S---------------S--S---S-----------------------------------SSS-----------------S
----------------------S----------------S-----------------------------S----------
--------------------------------------------------SS----------------------------
--------------S-------------------S-------------------------S-------------------
---------------------------------S--S-------------S-------------------S------S--
---------S---------------------------------SS------S-------S--------------------
----------------------------------------S-----------------------------S---------
-------------------S-------S---------------S------------------------------------
------------------------------------------S-----------S-------------------------
----S-----------------------------SS--------------------------------------------
----------------S-----S-----------------------------------S---------------------
S-----------------------S----------S------------------S-------------------------
------------S-S---------------------------------------------S-------------------
----------------------------------------------------S---------------------------
--------------------SS------------------S--------------SS-------SS-------------S
-----SS-------------------------------------S----------S------------------------
----------------S---------------------S----S-S----------------------------------
S-S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--S-------------------S-----------------SSS-------------S----------------S-----
-S---S---SSS------S--------S----S---------S--S---------------------------S------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_266
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------AGGGGCATGCTTCGTTCATC------------------------------------------------------
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>reverse_2604
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-------------------------------------------ATCTACACACTGCTCGAGCG-----------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
