>input_sequence_75014
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-----------ATGCAAGGCCTCGCGCCATCTTCAAGGG---------TTGTCGTGCTCGCGACGTTTTTCCTGATCGGT
TTCGGCGT---G------GCCGCCGCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGAT
GACGCTCTACTACCACGACATCCTCCACGACGGGGCCAACAACACGGCCAACGCGACGTCGGCGGCGGCGACGAGCCCGC
CGGCGCT---------------GAGCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGC
CAGGCGCTGCCCGCCGGGGCCGAGGAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGGTCGTT
CAACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCGCAGGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGGCGAGGAGACGCGGGACATCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGC
ACCGACGCCGTCGAGGGGTTGCTCTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------
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-----------------
>chr2D_1_TraesCS2D01G156600
CATCGCAATAATGCAGAGGTCGGGGGTTAACCTCCTTTTCAATTTTTTATAAAAAATATCAATGCATTGTTGGGGCTATT
TGCTTCACTGTCAACACTTGCCTTTCTAAAGCTGGGGCAAGTATTTTTATTCTTCTAAAGCTGGTGCAAGTATGCCAGTA
TGTACGGCCAAACCAACTTAGACAAATATTGCTGGCATGCCAAGTCACAGTCGAGTGTTACTGACGAGTAAATATCATTA
AACTTTTATCTTAGAAAGAGTAGTGTTGTTGTTTTGTGATATCATGTTGCGTACAAAATGTGCATTTTGGTGACATGTTC
AAGCGCATCTAGTCGGAGTTGTTCATTTGGGGCGGGACGTAAGAGGGATGGCTAGGGCGACGGCTAGCACCGTGATGGGA
GGAGGTCCAGGAGAGGCTGGGGTGGCAAGGCCGCCGGCCGCGAGGGCTAGAGAGGCGGTTACAACTAGGTAGGCCGCGGG
AGAGGACGAAGAAGATGAACAGGTGGCGGCGCATTCCTGACCGTTGGATATT-GACCTGATGACCATAAATAGAAGTGAC
CGGCATGAATTGTTTTTGCAGGTATCTGACGTATGGGTGCTCCCATGTCAGTGACAAAAATAGTATTCCATCCGTCCCAT
AATATAAGAGCATTTTTTACACTAGAGAGAGTAGTT----------------GTTGATGAGGTTCAAAGTGACGCTGAAA
TGGTACCAAC-GCCATGTTATTTTGCACAAGTTTTCACAGCATGGTGCTGGAACAACGACAGTGTACCAACCATGCCATG
TGTGTCTGATCGCTACCGTTACTTTTCACTCCGATTTATGGGCGGCCGGCCGGCCGACCCCTTTTACCGGGTCGGTCCTT
TTCACCGAATTACCAACCCCAC---TATTATTGTCTGCCCCACGCCACTATATATTTG------------CAGCATGCAC
GAGCCGAGCTCTTCGATCAGCTAGCCGCGCGCTTGCACCA------------------GCAAGAGTTGCACCGGTCGATC
ACAAATTCACAATGCAAGGCCTCGCGCCATCTTCAAGGG---------TTGTCGTGCTCGCGACGTTTTTCCTGATCGGT
TTCGGCGT---G------GCCGCCGCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGAT
GACGCTCTACTACCACGACATCCTCCACGACGGGGCCAACAACACGGCCAACGCGACGTCGGCGGCGGCGACGAGCCCGC
CGGCGCT---------------GAGCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGC
CAGGCGCTGCCCGCCGGGGCCGAGGAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGGTCGTT
CAACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCGCAGGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGGCGAGGAGACGCGGGACATCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGC
ACCGACGCCGTCGAGGGGTTGCTCTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGGCCCTGA
ATATCACCTGATGAGATCATGGGATGCCGTAGGGAGGTGGTGGGATTAATATGCTAGCATACGCGTGTGCGGAACTGCCG
ATTAGGACTTAGGAGTGATGCATGTATGCTGAAGCTGCTGCCGATGTGTTCGTGGTGTGATGTGCGTTGCATGCGTGG--
--GCATGTGGATCGTGTGTCATTGTCGTGTTA--CGCCAATACGAGTGTAAAATGTACCGCACCTTTATTCTGTGTTATA
AAAA--CTCACTTTGCAAACGATAACAGCCCTAGCTTATCGCTGTAGAA--GCACACACCAGCTATTTCACCCAAAAGCC
CGGTGCATGTAGCTCCCACTTGCGCAGGGTCCGGAGAAGGGTCCGACCACTTTGCGTCTATAGTACGCAGCCTTCCCCTA
CATTTCTGTAAGAGACTGTCTTCAAGACTTGACAATAGCTTTACCACTGCGCCAAGGCTCCCCTTCCCTAGTTCATCCAA
AAGCAAAAAAAAGAAAAAGAAAAAGAAGAGAAGAAGTTGATAACACGCCTTCCACCTTCGGTACGGTGAATGCATGTACC
AATCAATTTCAACACTATACCTCAAGTTTAGACTCTTTCGGTGTTTAGGCTGAGATCA----------------------
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-------------------------------------------------------------------ACAATGCTCATGT
CAAAATTTTCTATGCGCCGAACCTCCGAGCAGCTCGTCGAGGTTCACAAGCTGGCAAGGAGGCTTGGGCTTGACTCATTT
GACCTCCGAGCCGAGCCAAGC-------------CACGAGTCTCGAGCTTTCTGTTCACCTTTATAAAGCGTGCAACATA
GTTATGGTTTTGATTTTTAGGGTTACCCTC--------------------------------------------------
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---------------------------------------------------------------GCATCATCATAAGAGGT
TGCCAACATGATGAAGCGAGGTTCTTTTTTCTTTAAGACCATGAAGGGAGGTTTTGCCGATGATCCAAGAGCATGACGGG
ACACAATACTAATGCCTGATTTTTGGACGACCAGCTAATCGAGCGGCCATTGCCTTTTGACTCCCATGCATATGCCACGG
ATTAACAAGGTCGTGCA
>chr2A_139
--------------------------------------------------------------------------------
----------------------------------------------------------AGCTGGGCCAAGTATGCCAGTA
TGTACGGCCAAATCAACGAAGCCAAACATCGCTGGCATGCCAAGTCACAGTCGAGTGTTACTGACGAGTAAATATCATTA
AACTTTTCTCTTAG-AAGAGTAGTGTTGTAGTTTTGTGAC--CATGTTGCCTACTAAATGTGCAGTTTGGCGACATGTTT
CGTAGGTAAAGTGCACGTAGGGGAGTTTTGCGCATAAG------------------------------------------
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-----------------------------------------CCTATGTCAGTAGAAAAAT--------------------
-----------------------------AAATAGTACTCCCAGAGGGAGTAGTTGATGAGGTTCAAAGTGACGCGGAAA
TGGCACCAAC-GC-ATGTTATTTTGCACAAGTTTTCACAGCATGGTGCTGGAACAACGACACTATACCAACCACGCCATG
TGTGTCTGATCGCTACCGTTACTTTTCACTCAGATTTATGCCCGGCCGGCCGGC---CCCCTTTTACCGGGTCGGTCCTT
TTCACCGAA---CCAACCCCAC---TAGTATTGTCTGCTCCACGCCTATATATATGCGGATTTGCTTACACAGCATGCAC
GAGCCGAGCCCTTCGATCAGCTAGCTACTGGCACTGCCTGCTTAAGCACATATAGCAGGCAAGAGTTGCACCGATCGACG
--------ACAATGCAAGGCCTCGCGGCATCTTCAAGGG---------CCGTCATGCTCGCGACGTTTCTCCTGATCGGT
TTCGGCGTCGCC------GCCGCCGCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGAT
GACGCTCTACTACCACGACATCCTCCACGACGGCGCCAACAACACGGCCAACGCGACGTCAGCGGCCGCGACGAGCCCGC
CGGCGCT---------------GAGCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGATGACCCGGTGACGGTGGGG
CAGGCGCTGCCCGCCGGGGCCGAGGAGGAGCCCGCGGCGCGCGCACAGGGGTTCTACTTCTACGACGGGAAGGGGTCCTT
CAACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAATCTCATGGGCGCCGACCTCA
TGGGCGAGGAGACGCGGGACATCTCCGTCGTCGGCGGCACCGGCGATTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGC
ACCGACGCCGTCGAGGGGTTGCTCTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGGCTCCGA
ATATCACCTGATGAGATCATGGGATGCCGTAGGGAGGTGGTGGGATTAATATGCTA----------GTGCCGAACTGCCG
ATTA-------GGAGTGATGCATGTGTGCTGAAGCTGCTGCCGATGTGTTTGTGTTGTGATGTGCGTTGCATGTGTGGGC
ATGCATGTGGATCGTGTGTCATTGTCGTGTTATACGCCAATACGAGTGTAAAATGTACCGCACCTTTATCCTGTGTTATA
TAAAGACTCACTTTGCAAATGATAACAACCCTAGCTCATTGCTGTAGAAGTGCACGCACCGGCCAGATCACCCAAAAGCC
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>chr2B_459
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----------------------------------------------------------TTACAGCTAGGTAGGCCGGGGA
AGAGAAGGAAGAAGATGAACAAGTGGCGGTGGGTTCCTGACCGTTGGATATTTGACCTGATGGCTAGAAATAGAAGTGAC
CGACATGAATGGTTTTTGCAGGTATCTGACGTATGGGTGCTCCCATGTCAGTGACAAAAT--------------------
-----------------------------AGTAGTT----------------GTTGATGAGGTTCAAAGTGACGCTGAAA
TGGTACCAACCGC-ATGTTATTTTGCACAAGTTTTCCCAGCATGGTGCTGGAACAACGACACTATACCAACCATGCCATG
TGTGTCTGATCGCTACCGTTACTTTTCACTCCGATTTATGGCAGGCCGGCCGG----CCCCTTTTACCGGGTCGGTCCTT
TTCACCGAATTACCAACCCCACTAGTATTATTGTCTGCCCCACGCCACTATATATATG------------CAGCATGCAC
GAGCCGAGCTCTTCGACCAGCTAGCCGCTTGCCCGCCTAAGC---------ATAGCACGCAAGAGTTGCACCGATCGATA
--------ACAATGCAAGGCCTCGCGGCAGCTTCAAGGG---------TCGTCGTGCTCGCGACGTTTTTCCTGATCGGT
TTCGGCGT---G------GCCGCCGCCGACGGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCTTGCAGGCAGAT
GACGCTCTTCTACCACGACATCCTCCACGACGGCGCCAACAACACGGCCAACGCGACGTCGGCGGCCGCGACGAGCCCAC
CGGCGCT---------------GAGCAACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGC
CAGGCGCTGCCCGTCGGGGCCGAGGAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGGTTCTT
CAACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGGCGAGGAGACGCGGGACATCTCCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCAACCATCCGC
ACGGACGCCATCGAGGGCCTCTACTACTTCCGCTTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAGACTTCGA
--ATCACCTGATGAGATCATGGGATGCCGTAAGGAGGTAGTGGAATTAATATGCTAGCATACGCGTGTGCCGAACTGCCG
ATTA-------CGAGCGATGCATGTATGCTGAAGCTGCTGCCGATGTGTTCGTGGTGTGATGTGCGTTGCATGCGTGG--
--GCACGTGGATCGTGTGTCATTGTCGTGTTATACGCCAATATGGG-----AATGTAGCGCACCTTTATTCTGTGTTATA
AAAA--CTCACTTTCC--ATGATAGCAGCCCTAGCTCATCGTTGTAGAAGTGCACACACCAGCTAGTTCACCGAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------GCCTTCCACCTTG-----GGTGAATCCATGTACC
AATCAATTTCAACACTTCACCTCAAGTTTAGACTCTTTCGGTGCTTAAGCTGAGATCAATGCAGACCACAACTACTTTTG
TTAATAGTGCGTTGGCCGGGTTTTGTACATGAGACCTCATGGCTCTAATTTTATATTGAACTGAGCTATTTTAGCTTTTT
CTAACAAAAAGTTTGAGTAGTGAAGTGAAAAGAGGGTAAAGATTTCTTCCATCCTTCCTAGGTCCTTGTGCTTGCACCCT
CTCAGACATCTTTTTCACACTACAACTAGTTACCACAAAAGTCTAAATTCATGGACAAGAGCTGAGCTATGCCCCATGTG
TTGATTGTCAGGATCAACTAGGTTAAGGGACTGTTCGGAGTCCCTCTGCTCCACGCTGCCGCTCCCGGAGCTGGCGGAGT
TTTAGTTGAAAACCGCGGAGCGAGTGAACAGGTATTCATCAGATTCTTAAATTCCAGAGACCCCTAAGCTTGAGCCACAT
AGAAATGAGAAGATGGACAATTACCTTGATCTTTTTTTTAGAAAAGGAGGATGACCCCGGTCTCTGCATTCTGGGAGAAG
CATGCGGCCATTTTATTGATTATTCTCGAGGACCTTACAAAGTAGAACAACAATATGCCTGAATCCAGTATCTTGGCAAT
TTGCCGCTACTCCTGTCCATATAATGAAGGGGTGCAAGCTGAACAACATACCCAGCCTCTCACCTAAGCCTAACGTCTAA
AGCCGGAGGCCCCGACCGAACCATCTGCCAGGTCTGGGGCACAAATTGGTCCGACGCACTCATATCTGTCGTCGCCGCAT
CTTTCACTAGTCCACCTTCAAAGCAGATTGAGGTGTCAACCCATCTTGAGGTCTTGTCATCTTCTCTTCTTCTTCCTTCT
CTTTCTAGATCTTAATATGATGTCTGTTTGGTCCTTTGCAGTGCCTCCAGTGCTTGCTCTGATCCTGAGTTTGGGGTCGA
GCTTGAGCGAGGGTGAGAGCGAGAGCTTAGAGCAACCGCATATGGATCTCTCACATGTATTTATATGCACTGTGCACTAT
GTTGGAGGAAAGTTGCCCCCGATCATGACAAAATTGCTGTAGCAACTAGACCACTGCTGCAACACTGTAGCAGTATTGTA
GTAGCAACAAATTATTGATCTACTATTTAGATGCAAATCACAAAATATCCAACAGCAGGCACTACATATTATTTTTAATT
TTTTAGGTAAAATTTTGAAGGTATTACATATATAGAATTTTGTATGGGTCAGGGTTCAGCCCGTTGAATGGTCAGCAGTT
AACTTTTGATAAAAAAGAAAAAAAAATCCAAAAACAAAAAGGTTAGCGAATTCAAAGAAGTCCTTGGATTAAAAAAAAGC
AATTTCAGTAATAGTTCCCAACTTTTAAAAAACATGGTTTTGAAAAAAAGTTCAAGGATTTGAAAAGTGTTCGTTGATTT
TGCAAAAAGTTCATTTATTTTGACAAAATGTTCACGAATTTTAAAAAAGTTCATTGATTTAAAAAAAGTGCACGAATTTT
GAGAAAAAAAATCACGGATTCGAAAAGTTCATCGATTATGAAAAAACATCAATTTTGAAAAAAATTCATTGATTTTGAAG
AAAAAGTTCATGGATTTTGGAAAAAGTTCATCAATTCGGGGGAAAAAGTTCATGAATTTTTAAAGGTTTGCGCATTTGAG
AAAAAAGAAAGAAAATAAATAAAAAAGGAGAAAAAGAAACAAGGAAAAAGAAAGAAGAAAGAAAAACTAAATAAGAACCA
CCCAAAACCGACTAGCAAACCGGGAAACCGGTTGGGGAAGCTTCCCAAAACCGAGGGTTTTCGCGAACTGAAAAAAAAGG
TAATAGGCACGAGCGTTAAGATGTCCTAGTTGGTTTTGCAGTTCTCTCTCAATGAAGAAGTCATGAGTTCGAGTCATGTC
GCCTGCACATTTTATTAAAGTTTAACAGAAAAAGGGTAAATGGTCATGAGGGGTGTGCGCCGGTTGGCTAATTAGCCTTT
TACCGACGCTGATGGCGCCAAATAGGTGTCGGGCTAACTAGCACGTACATGACATACATTGACTTAAAAAAACATACTCT
CTCCGTTCCTAAATATTTGTCTTTCTAGACATTTCAAATGACTAACACATACGAATGTGTGTAGACATATTTTAGAGTGT
AGATTCATTCATTTTACTCCGTATGTAGTCACTTGTTAAAATGCCTAGAAAGATAAGTATTTAGGAAAGGAGGGAGTACA
TGACACACGTGACCAGACGCTCGACCTCATGTTCGACCACCGACCGCCACCGTCGTAACGGCCTCCTCCAGTAACTTCCC
CAACTCATTGGTCATCTGCACGAGCGTCGAGTGCGCGGCCCCGGTTCCTCGGTTGCTGGTCTGTTGCCACACCGCGCTGC
CACCCTGCCGCCGTTTGCTGCCCGCCGACTCACTTGCGTCTTTGACCGTCCTTAAAACGGACACTGTATTTGTCTGCGCA
CTAGTCCGGAGAGTCCAAGTCATCCAACCCTGTCTCGCAAAACGTCCATCCTTGTTTTTAAGTCTGCAACACTTCAAATA
CATATAGAAAATAACATAATTCATCCATAAATAGCATGTAAATATTCCTAGTACAACAATAGTTCAAATATAAATATCAC
ATCCGAGATAATTGGATGTTCAACAATGCTTCCCATTTGAATATGCTTGTGAATTGCCAAAGTTTCAACAATGCTCATGT
CAAAAATTTCTATGCACCGAGCCTCCGAGCAGCTCGTCGAGGTTGACAAGCTGGCAAGGAGGCTTGGGCTTGACTCATTT
GACCTCCGAGCCGAGCCAAGCTTGTGAGCCAAGCCACGAGTCTCGAGCTTTCTGTTGACCTTTATAAGGCGTGCAATATA
GTTATGGTTTTGATTTTTCAAAAATGGTAGACGTACAAGCTTTTACAGGTTTCTACAGGCTTCTTTCAAACTTTCTAAAC
ACCCTCCTCCCTCTGATTTCAATGGGGGTGGGCCCGTGCCTCTACTAATGACCAATTAAAAACTGCCACAACACCCTGTA
AACCCCTCATGCCTGTAACATCCTGTATGTGTAGCAAAGCTCTTGATTTTTAGGGTTACCGCTGCATCATCATAAGAGGT
TGCCAACATGATGAAGCGAGGTTATTTTTTCTTTAAGGCCATGAAGGGAGGTTTTGCCGATCATGCAAGAGCATGATGGG
ACATGATACTAATACCCGATTTTTGGACGACCAGCTAATTGAGCGGCCAGTG----------------------------
-----------------
>chr2D_998
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--------ACAATGCAAGGCCTCGCGGCATCTTCCAAGCTGTCGCTGACCGTAGTGGTCGTCGCGGTGTTTCTGCTCGGC
TTG------GCG------GGCGCCGCCCACGGCAGGAGGAAGCTCGTCTCCAGCGCCAACGACGAGCCGTGCAAGAAGAT
GACGCTCTACTACCACGACATCCTCTACGACGGCGGCAACAACACGGCGAACGCCACGTCGGCAGCGGCCACGGAGCCGA
CGGCGCTGAGCAATA---------------GCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCCATGACCAAAAGG
AAGGCGCTGCCCGTTGGAA---ATGAGCTGCCCACGGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAAAGGGTCCTT
GAACTCGTGGTTCGCTTTCTCACTCGTGTTCAACTCCACGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGGCGAGAGAACGCGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGC
ACCGACGCCATGGAGGGCTTGTACTACTTCCGCT-----ATGGACATCAAACTCTACGAGTGCTATGTCTGA--------
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>chr2D_1000
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----------AATGCAAGGCCTCACGGCATCTTGCAAGA---------TCGTGC------TCGTGATGTTTCTGCTCGGC
TTAGGCTT---GGCAGGAGCCACCGCCGACAGCCGTAGGAGGCACATCTCCAGCAGCCCTGACGAGCCGTGCAAGAAGAT
GACGCTCTACCTCCACGACATCCTCTACAACGGTGTCAACAACAGTGCCAACGCGACGGCGGCGCCGGCGACCAAGCCGA
CGGACCTGAGCACAACGCACTGGAGCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGG
ACGGCGCTGCCCATCGGGC---AGGAGGAGCCGGCGGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAAGGAGTCGTA
CAGCGGGTGGTTCTCCTTCTCGCTCGTGTTCAACTCAAAGGCATGCAGGGGCACCCTCAACCTCATGGGCGCCGATCCCA
TGGACGCGGAGACGCGTGACTTTTCCGTCGTCGGGGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCGACGATCCAC
ACCGACGCCACCGAAGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCT----------
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>chr2A_1000
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----------AATGCAAGGCCTCACGGCATCTTGCAAGA---------TCGTGC------TCGTGATGTTTCTGCTCGGC
TTAGGCTT---GGCAGGAGCCACCGCCGACAGCCGTAGGAGGCACATCTCCAGCAGCCCTGACGAGCCCTGCAAGAAGAT
GACGCTCTACCTCCACGACATCCTCTACAACGGTGTCAACAACACCGCCAACGCGACCGCGGCGCCGGTCACCAAGCCGA
CGGACCTGAGCACAACGCACTGGAGCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGG
ACGGCGCTGCCCGTCGGGG---ACGAGGAGCCGGCTGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAAGGAGTCGTA
CAGCGGCTGGTTCTCCTTCTCGCTCGTGTTCAACTCAAAGGCATGAAGGGGCACCCTCAATCTTATGGGCGCCGATCCCA
TGGACGCGGAGACGCGTGACTTTTCCGTCGTCGGGGGCACCGGCGACTTATTCATGGCGCGCGGCGTCGCCACGATCCGC
ACCGACGCCACCGAGGGGTTGTTCTACTTCCGCCTAAAGATGGATATCAAGCTCTACGAGTGCTACGTCTGA--------
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>chr2A_1000
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----------AATGCAAGGCCTGGCGGCATCTTGCAAGA---------TCGTGC------TCGTGATGTTTCTGCTCGGC
TTAGGCTT---GGCAGGAGCAACCGCCGACAGCCGGAGGAGGGTCGTCTCCAGCAGCCCCGACGAGCCGTGCAAGAAGAT
GACGCTCTACCTCCACGACATCCTCTACAACGGCGTCAACAACACCGCCAACGCGACGGCGGCGCCGGTGACCAAGCCGA
CGGACCTGAGCACGTCGCACTGGAGCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTCACGGAGGGT
ACGGCGCTGCCGGTCGGCG---ACAAGGAGCCGGCGGCGCGCGCGCAGGGCTTCTACTTCTACGACAAGAAGGAGTCGTA
CAACGCGTGGTTCACCTTCTCCCTCGTGTTCGACTCCAAGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGACGACGAGACGCGCGACCTCTCCATCGTCGGCGGTACCGGCGACTTCTTCATGGCGCGTGGCATCGCGACGATTCGC
ACGGACGCCACTGAGGGCTACTTCTACTTCCGCCTCAAGATGGACACCAAGCTCTATGAGTGCTACGTCTGA--------
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>chr2B_1062
TC------------------------------------------------------------------------------
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--G------GCG------GGTGCCGCCCACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGAT
GACGCTCTACTACCACGACATCCTCTACAACGGCGT-AACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCA
CGGCGCCGAGCACGACCCACTGGAAGAACGGCACCTACTTCGGCACGCTTGTGGTGTTCGACGACCCCATGACGGTGGGG
AAGGCGCTACCCGTGGCGG---GGGAGGAGCCCGCGGCGCGCGCCCAGGGCTTCTACTTCTACGACAAGCAGGAGTCTTA
CACCTCGTGGTTTGGTTTCTCCATTGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCGGACCTCA
TGGATGACAAGACGCGGGACCTCTCCGTCGTCGGCGGCACTGGCGATTTCTTCATGGCGCGCGGCATCGCCACGCTCCGG
CTCGATGCCTCCGAGGGAACCGTCTACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------
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>chr2A_1062
TC------------------------------------------------------------------------------
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--G------GCG------GCCGCTGCCCACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGAT
GACGCTCTACTACCACGACATCCTCTACAACGGCGTCAACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCA
CGGCGCTGAGCACGACCCACTGGAAGAACGGCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCATTGACGGTGGGG
AAGGCGCTACCCGTGGCCG---GGGAGGAGCCCGCGGCGCGCGCCCAGGGGTTCTACTTCTACGACAAGCAGGAGTCGTA
CACCTCCTGGTTTGGCTTCTCCATCGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCGGACCTCA
TGGACGACAAGACGCGGGACCTCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGC
CTTGACGCCTCCGAGGGAGCCGTCTACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------
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>chr2D_1069
GGC-----------------------------------------------------------------------------
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-----------------AGCCGCCGACAGCAGCCGGAGGAGGCTCGTCTCCAGCAGCTCCGACGAGCCGTGCAAGCAGAT
GACGCTCTACCTCCACGACATCCTCTACAACGGCGTCAACAACACTGCCAACGCGACGGCGGCGCCGGCCACCAAGCCGA
CGGACCTGAGCACGTCGCACTGGAGCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTCACGGAGGGG
ACGGCGCTGCCGGTGGGGG---ACGAGGAGCCGGCGGCGCGCGCGCAGGGCTTCTACTTCTACGACAAGAAGGAGTCGTA
CAACGCGTGGTTCACCTTCTCCCTCGTGTTCGACTCCAAGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCA
TGGACGACGAGACGCGCGACCTCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGTGGCATCGCCACCATCCGC
ACCGACGCCACCGAGGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------
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>chr2B_1069
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-----------G------GCCGCCCCTGACAGCCGTAGGAGGCACATCTCCAGCAGCCCTGAC-------GCAAGAAGAT
GACGCTGTACCTCCACGACATCCTCTACAACGGCGTCAACAACACCGCCAACGCGACCGCCGCGCCGGTCACCAAGCCGA
CGGACCTGAGCACGTCGCACTGGAGCAACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTGACGGAGGGG
ACGGCGCTGCCGGTCGGGG---ACGAGGAGCCGGCGGCGCGCGCGCAGGGCTTCTACTTCTACGACAAG---GAGTCGTA
CAGCGGGTGGTTCTCCTTCTCACTCGTGTTCAACTCAAAGGCATACAGGGGCACGCTCAACCTCATGGGCGCCGATCCCA
TGGACGAGGAGACTCGTGACTTCTCCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCGACTATCCGC
ACCGACGCCACCT-GGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA--------
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>chr2A_1080
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----------------------------ACGGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGAT
GACGCTCTACTACCACGACATCCTCTACAACGGCGTCAACAACACGAAGAACGCGACGTCGGCGGCGGCCACAAAGCCCA
CGGCGCTGAGCACGACCCACTGGAAGAACGGCACCTACTTCGGCACGCTCGTGGTGTTCAACGACCCCATGACGGTGGGG
AAGGCGCTACCCGTGGCAG---GGGAGGAGCCTGCGGCGCGCGCCCAGGAGTTTTACTTCTACGACAAGCAGGAGTCATA
CACCTCCTGGTTTGGCTTCTCCATCGTCTTCAACTCCACGGCGCACAAGGGCACCCTCAACCTCGTCGGTGCGGACCTCA
TGGATGACAAGACGCGGGACCTCTCTGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGGGGCATCGCCACCCTCCGC
CTCGATGCCTCCGAGGGAACCGTCTACTTCCGTCTACAGATGGACATCAAGCTCTACGAGTGCTACGTATGAGG------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------SS--------------
------------S----SS--S----S--S--------------------------------------------------
-------S------S--------------S---------SSS--------S---S---------S-----S--------S
SSSS-SSSSSSSS-SSSSSS-SSSS---S-S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------S--S
----S-S--------------S-------S-SS-----------------------------S-S-S-------------
--S-------S------------------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
-------------S-----------------------------------------------S-S----------------
-----------------------------------------S------------SSS-----------------------
-------------------------------------------------------S------------------------
----------------------------SS--SS--S-S----------------------------------S-----S
SSSSSSSS------------------S----------------------S------------------------------
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---------------------------------S----------------------------------------------
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---------------------------------------------------------------------------S-S--
----------------------------------------------------------------------S---------
----SSSSSSS---------------------------------------------------------------------
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-------------------S----------------S----------------------------S--------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSSSS-------S--------
----------------SS-------------------------S---S--------------------------------
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-----S---------S----S-----------------------S-----------------------------------
--------------------------------------------------------S----------S--------S---
------------------SSSSSSSSSSSS--------------------------------------------------
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-----------------------S-------------S-----------------------S--S-----------S---
---SS--------S--S----------------------S---------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_339
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-------------------------------------------------------------------------------C
AAGCGCATCTAGTCGGAGT-------------------------------------------------------------
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>reverse_2116
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-----------------------------------TAGCTTTACCACTGCGCCAA-------------------------
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-----------------
