>input_sequence_74953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACCA
TAGCAACACAGGCAGCAACAACTTC--------TGACTTCACGTACAAGAGTTTTCGGTCAACCGATCTCGGTTTTCGGG
ACCTGATGGAGGAGAACAAGGGAGCGGCGGC---GGCGGTGCCGGAGAAGG---------AGGCGCCAGCGTCGTCGTAC
TTCAAGAACACGGTGGACGAGGGCGCGAGGTTGGTGGAGCTGGCCAAGGGCCAGTACCGGCAGTTCACCGAGGTGCAGGC
GAAGGAACAATGGGCGTGCATCAAGAAGAAGGTCAGCTCCATGCTCGCCGAGCCCATCTTCGGCGGGTCCAAGGGCGACT
CCAGCAGCAGCACGCCGCCGTCCGTCCACTCGCAGTAGATCATCATCGTCATCTAGATAGCCTATTAGTAA---TTTAGT
TGCGTCTTGTTTCTCTCT-AGCACTTG----------------GACAAATTTCAGCATTATCAGTCTGCAGATATCATAA
AAAAAATT--CAGAGGTTTCACAG--AAGTTTCAGAGTTGTGTGAATCCACGTTCTACACTTTCCTTTTTGAAAGGAAAG
GTAGATACGTTCTACACTTTTGAATACCATAACAGATTCA-------AGTTGTAACTAAATCAAAATTCGAAATTATA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr7D_1_TraesCS7D01G453400
GTTTTTGTTCTTTCATTTAATGAATAGCAAGCTTCCAGAC-----TGATGAAGGACTATGAATCATCTTGACAACATGAA
CTACTAGTTAGCGACAATACTGTGCCGATGCGGCCTCGCCAACTTCGCCCCGAGCCCGGAGTCCACCCTAATTGACTGGT
GGCCGTCATCCCGCGTGCTGGTCTCGCCGCATGCTAGGAAAGGTTTCAATTCCATCGTGCTGCTCACTGTCTGGAAGCTT
TGGAAGGAGAGAAACAGTCGTGTCTTCGAGCGCTCTGCCGTAGTAGCTAGCGAGCTCTGTAGGCTGGCCGCCGCCGAGGC
AGAGTTGTGGATGCTCTCTGGGGCATCAGGGTTGAGTCGTTTCTGACGATAGCTAACTTAATGTTGCCCTGGGCGCTGTA
TTGTATCGTACGCTAGTCATGCGAGCCAGGGCATGAGCGTCGTGGCCATCGTATGCCGCTGTTTGTAGCTACACTGTATT
ATTTCTTTTCTTCCCTACCTTAATACACCGACATGCAAGCCTTTTGCGTGTTCGCGAATAAAGAATTCAACAGCTAATTA
TTCAACTCTGAAGACCAGAACTAATTGG---CATCGACAAAAACCTTCAGTAACCAACAGAGCCTCAAACCCTGGAGCTG
GGGACAAGGAAGAAAAGGGACGAGGGACGCAGAGAGAACGAACAGTTCCCGTTCCGTGTGCACTTGGGAAAGGGAAATCA
TCATCAGAAAAGAAAAGAGTCCGTTTTTACTTATAATCCGGACCCAAGAATTTGTTTTTACTTCTTTTCTACCTTGATCC
GAAGGGTTCCTTGTGCCATCATGTAT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTTTATCCAATTA-TTATCATCCAGAGGTTAACGGG
ACGCTCTCTTTCTCTTCCTCGGTTCGGTCTCTGTTTCTTTCTTTTCTCCTACTCCAAGGCTGCGACGGCCCCGGCTTCCT
TCTCAAGACAGCCGGTGCC-------TCATGACCGA-CCCCATATAAGTAGGCCCGGCCCCGCGACCCCCTGGCC-ACCA
TAGCAACACAGGCAGCAACAACTTC--------TGACTTCACGTACAAGAGTTTTCGGTCAACCGATCTCGGTTTTCGGG
ACCTGATGGAGGAGAACAAGGGAGCGGCGGC---GGCGGTGCCGGAGAAGG---------AGGCGCCAGCGTCGTCGTAC
TTCAAGAACACGGTGGACGAGGGCGCGAGGTTGGTGGAGCTGGCCAAGGGCCAGTACCGGCAGTTCACCGAGGTGCAGGC
GAAGGAACAATGGGCGTGCATCAAGAAGAAGGTCAGCTCCATGCTCGCCGAGCCCATCTTCGGCGGGTCCAAGGGCGACT
CCAGCAGCAGCACGCCGCCGTCCGTCCACTCGCAGTAGATCATCATCGTCATCTAGATAGCCTATTAGTAA---TTTAGT
TGCGTCTTGTTTCTCTCT-AGCACTTG----------------GACAAATTTCAGCATTATCAGTCTGCAGATATCATAA
AAAAAATT--CAGAGGTTTCACAG--AAGTTTCAGAGTTGTGTGAATCCACGTTCTACACTTTCCTTTTTGAAAGGAAAG
GTAGATACGTTCTACACTTTTGAATACCATAACAGATTCA-------AGTTGTAACTAAATCAAAATTCGAAATTATACA
TTACATGTGTT----------------------AAGTCAGATCGGTCCTACTCAGCACCGTAGGACTGGATTCACACGTA
CCGTTCGATCCATATCAGCTTGCCTCGTCGACGCTCGCCGCCTCCCTACCACGCTCGCCATCGTTGCCCCCGTGGCATTG
CCTGTCGCTGACGGTAGCACCACGTCTTCAGCGGATTCAAGGGTGAATCCAGTAGTAGCACGCCGCCGTCCGTCGAGTCA
CAGTAGATCATCATCCTCACCTACCATGAGGAAAGGTCAATGATTATTAAACCTACCATGAATTTTCTCGTTTGAAAATC
TTAGCAGATTAAAATCACCCACCTATC-----AAAATAGGGTA--GATTATCTTTCGCCAGGTTAACCAGCTCACGAAGA
AAGTCGGCCTTGAATTCATCCTGGGCTGCACCATACACCGCAACGAGAGTCCATGTGAATTTGCCGGCT--TTGCTGCGG
ATATGGATTTTAATATGATATTC-CCATCCGAACTAGCCAACGCATCCATCGTCCCAGTATTG------AGTAATATGCC
-C-CAGAACGACCCCTAGGCGGACGTAAAATCCAAGTGAAGTTTATGCCGCCTGTAATACAGTTAAGAAGACTTACCAAG
AAATCACATCTACCCGTTTCTGATATAGCCAAAAA--TCTAGATCACGTTCACTATTATAATCCACAATGAATAAATGTT
TAGCCAAGTCACCTA------TGCTATTATAGAACATGCCATTCATTATTGT----TGGGAGATTTAGATGTTTTGGTCC
TCTTAGATGACTTCTGGCCCTTTTTCAAACGTGAGGCTTTAGATTTACGTCTGAATGATGTAATTTCATGCAATGAACTA
AGCTCAGATTCATTCAAACCCACGTTCGAAACCTCTCCCACTACATGAGTTAGGAGCTGACCATCTACGTCCAAATGTTG
TAAGTTCATGCAATGAACTAAGCCCAGATTCATCCAAGCCCACGTCTGAAACCTCTCCCACTACAAGAGTTAGGAGCTGA
CCATCTGCTG
>chr7B_2
-TTTTTGTTCTGTCATTTAATCAATAGCAAGCTTTCAGACTCAGATGATGAAGGACTATGAATCATCTTGACAACATGAA
CTACTAGTTAGCAACAATACTGTGCCGTGCGAATACAGGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCAACAGCTAATTA
TTCAACTCTGAAGACCTGAACTAATAATTGTCATCGACACAAACCTTCAGTAACCAACAGAGCCTCAAACCTTGGATCAG
AGGACAATG-----------------------------------------------------------------------
--------------------------------------------------AAGAAAAGGGACGAGGGAAGCAGAGAGAAC
GAACAGTTCCCGTTCC------GTTTGCACTTGGGAAAGGGAAATCATCATTAGAAAAGAAAAGAGTCCGGTTTTACTTA
TAATCCGGA-CACAAGAATTTGTTGTTTTTACTTCTGTTCTTCCATGATCCGAAGGA-----------------------
---------------------------------------------------------------------------TTCCT
TGTGTCATCATG----------------------TATTC-------TTATCCAG----TTATCATCCAGAGGATAACGTA
ACGCGCTCTTTCTCTTCCTCGGTTCGGTTTCTGTTTCTTTCTTTTCTCCTACTCCAAGGCTGCGACGGCCCCGGCTTCCT
CCTCAAGACAGCCACCGCCTCATGAATCATGACCGA-TCCCATATAAGTAGGCACGACCCCGCAACCCG-----C-ACCA
TAGAAACACGGGCAGCGACATCTTC--------T----TCACGCACGCAAGTTTTCGATCAACCGATCTCAATTTTCGGG
ACCCGATGGAGGAGAACAAGGGAGCGGCGGCAGCGGCGGTGCCGGACAAGGAGGCGGCGCAGGCGCCAGCGTCGTCGTAC
TTCAAGAAGACGGTGGACGAGGGCGCGAGGTTGGTGGAGCTGGCCAAAGACCAGTACCGGCAGTTCACTGAGGTGCAGGC
GAGAGAACAATGGGCGTGCATCAAGAACAAGGTCAGCTCCATGCTCGGCGAGCCCATCTTCGGCGGATCCAAGGGCGACT
CCAGCAGCAGCACGCCGCCGTCCGTCGAGTCGCAGTAGATCATCATCGTCATCTA-ATAGCCTATTATAGTAATTTAAGT
TGCGTCTTGTTTCTGAAAAAAAATTGTCCAAGTGGTGCTCAGAGAGAAATTTCAGCGTTATCAGTCTGCAGATATCATAT
ATTT--TTTGCAGATGTTTCACAAAAAAGTTTTAGAGTTGTGTGAATC--------------------------------
-----TACGTTCTAAACTTTTGAATACTAGCAGGCGAGTCAAGTAGGAGTAGTAACTAAATCAAAATTGTACATTAGATG
CCTTTTACTTGAGGCCGGCGGGCGACTGGCACAAAGTCAGATCGGTCCGACTCAGCACCGTAGGACTGGATTCACACGTA
CCGTTCGATCCCTATCCTCAGCCAATTTGCTCACACGCTTGAGATCGTACGCACAGGAAAAATATTCCCTGGCTTTCGTC
ACACACCAGCCGGCTGCCTTCTCGTCGCCTTGGTTGCAGATCC----------AGCAGCAAGCCGCCGTCCGTCAAGT--
-----GATCATCATCTTCAAA-----------------AAGGATTATCAAACCTACCATGGATTTTGTCGTTTGGAAATC
TTAGCAGATTAAAATCACC-ACCTATC-----AAAATAGGATAGGGATTATCGTTTGCCAGATTAACCAACTCACGAAGA
AAGTCGGCCTTGAATTCATCCGGGGCTGCACCATATATGG----------------------------------------
------ATTTCAATATGATACTC-CCATCCGAACTAGCCAACACATCCATCGTCCCAGTATTCACACCAAGTAATATGCC
AC-CAGAACGACCCCTAGGCGGACGTGAAATCCAAGTGAAGTTTATGCCGCCCGAAATACAGTTAAGAAGACTTACCAAG
AAATCACATCTACCCGTTTCTGATATAGCCAAAAAAT-CTAGATCATGTTCCTTATTACAATCCACGATGAATAAATGTT
TAGCCAAGTTGCCAAGATTTGTGCTATTATAGAACATGCCATTCATTATTGT----TGCGAGATTTAGACGTATTGGTTC
TCTTAGATGGCTTTTGACCCTTTTTCAAACGTGAGGCTTTAGATTTATGTCAGG--------------------------
--------------------------------------------------------------------------ATGTTG
TAAGTTCATGCAATGAACTAAGCCCAGATTCATCCAAGCCCACGTCATGA------------------------------
----------
>chr7B_632
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GGGACAAGGAAGAAAC----------------------------------------------------------------
----------------------------------------------------------GGACGAGGGAAGCAGAGAGAAC
GAACAGTTTCCGTTCCCGCTCCGTTTGCACTTTGGAAATCG---------------AAGAAAAGAGTCGGTGTTTACTTC
CAATCCGGA-CCCAAGAAT---TTGTTTTTACTTCTTTTCTTCCATAATTCCATGATCCG----AAGTAGTAGTTCCCTT
-------TTTTTAACATCACCG--------------------------------------------AAGTAGTAGTTCCT
CGTGTCATCATGT-----------GGCCAATTTGTATTC-------TTATGCAG----TAGTCATCCAGAGGTTAACGGG
AAGCTCTCTTTCTCTTCCTCGGCTCGGTTTCTGTTTCTTTCTTTCCTCCTACTCCAAGGCTGCGACGGCCCCGGCTTCCT
TCTCAAGACAGACGGCGGC-------TCATGACCGA-CCCCATATAAGTAGGCACGACCCCACGACCTCCTGGCC-ACCA
TAGCAACACAGGCAGCGACAACTTC--------T----TCACGCACGCAAGTTTTCGATCAACCGATCTCAGTTTTCGGG
ACCTGATGG---AGAACAAGGGAGCGGCAGC---GACGGTGCCGGAGAAGGAGGCGGCGCAGGCGCCAGCGTCGTCGTAC
TTCAAGAGGACGGTGGA---------------------GCTGGCCAAAGACCAGTACCGGCAGCT---CGAGGCGCCGGC
GAAGGAGCACTGGGCGAGCATGAAGAACAAGGTCAGCTCCGTGCTCGGCGAGCCCTTCTTCGGCGGATCCAAGGGTGACT
CCAGCAGCAGCACGCCGCCGTCCGCCGAGTCGCGGTAGATCATCATCGTCATCTAGATAGCCTA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr7D_637
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CAATG-----------------------------------------------------------------------
--------------------------------------------------AAGAAACGGGACGACGGAAGCAGAGAGAAC
GAACAGTTTCCGTTCCCGCT-CGTTTGCACTTTGGAAATCC---------------AAGAAAGGAGTCGGTGTTTACTTC
TAATCCGGA-CCCAAGAAT---TTGTTTTTACTTCTTTTCTTCCATAATTCCACGATCCGAAGTAAGTAGTAGTTCCCTT
-------TTTTTA-CATCACCGAAGTAGGGTAAACATGTTGTAGAGCATAGGCTTTGGGACACCCCAAGTAGTAGTTCCT
CGTGTCATCATGT-----------GGCCAATTTGTATTAATTCTTTTTATCCAGTTATTATTCATCCAGAGGTTAACGGG
ACGCTCTCTTTCTCTTCCCCGGTTCGG--TCTGTTTCTTTCTTTTCTCCTACTCCAAGGCTGCGACGGCCCCGGCTTCCT
TCTCAAGACAGCCGGCGCC-------TCATGACCGAACCCCATATAAGTATGCACGACCCCGCGACCCCCTGGCAAACCA
TAGCAACACAGGCAGAGACATCTTC--------T----TCACGCACGCAAGTTTTCGATCAACCGATCTCAGTTTTCGGG
ACCTGATGG---AGAACAAGGGAGCGGCAGC---GGCGGTGCCGGAGAAGGAGG---------CGCCAGCGTCGTCGTAC
TTCAAGAGGACGGTGGA---------------------GCTGGCGAAAGACCAGTACCGGCAGCT---CGAGGCGCCGGC
GAAGGAGCACTGGGCGAGCATGAAGAACAAGGTCAGCTCCGTGCTCAGCGAGCCCTTCTTCAGCGGATCCAAGGGTGACT
CCAGCAGCAGCACGCCGCCGTCCACCGAGTCGCAGTAGATCATCATCGTCATCTAGATA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr7A_814
AATCCACAATGAATAAATGTTTAGCCAAGTCACCTATTCTATTGTGGAACATGCTATTCATTATTGTTGGGAGATTTAGC
GTTTTGGTCCTCTTAGATGACTTCTGACCCTTTTTCGAACGTGAGACTTTGGACTTACGTCTGAATGCTGTAAGTTCATG
CAATGAACTAAGCCAAGATTCATCCAAGCCCACGTCCGAAACCTCTCACACTACATGAGTTAGGAGCTTACCATCTACTG
TGGCATGCAGCGCTCCTCCTCAACTAAATGAGAGGGAATGGGTTTGTTAGAAATCAGTGAAGTAACCTTTAATCAGTCAT
ACTTCATATGGCTCAAAGCATTAGTCGAAACATAAATTTCCTTTTCATTACTACCTAGACTAACACCAACATTATTTAGG
TTTGAAGCAATTGTAGTAGCCGGCATATGGTTACTTGGATGACGAGATTATGCCTGTGTGGTTGAGGTTATGCACCGCTT
TACGGCGCATTGCCTTGGCCAAGGAATCTTCATCCGTATCCATCCGCCCATTCTCAGCAACTGTATGCCGGTTACTACGA
CGAGACGGAGTCGTCTCCACTGAAGCATGCCGCACGTGCTAACTGTCGATGAAGGGGATGAAGTTGGTGTAGAAACCCCC
TCCCCAACAGCATCGATAGAAGGCTTGAGTGAAGATGTCGCAAAGGTCGGTGTAGATGGAGCAGGATCAGAGGTCGGTGT
AGAGGGTGTTTTCTTGAGAGGAAAGCTCCGGCTTGGAGCAGGGGACAAGGAAGAAACGGGACAAGGGAAGCAGAGAGAAC
GAACAGTTTCCGTTCCCGCT-AGTTTGCACTTTGGAAATCC---------------AAGAAAAGAGTCGGTGTTTACTTC
CAATCCGGACCCCAAGAAT---TTGTTTTTACTTATTTTCTTCCATA-TTCCATGATCCG----AAGTGGTAGTTCCTTT
CTTCTTCTTTTTGACATCACCG--------------------------------------------AAGTAGTAGTTCCT
CGTGTCATCATGTCCATGTGGCCAGGCCAATTTGTATTC-------TTATCCAG----TCATCATCCAGAGGTTAACGGG
ACGCTCTCTTTTTCTTCCTCGGTTCGATTTCTGTTTCTTTCTTTTCTCCTACTCCAAGGCTGCGACGGCCCCGGCTTCCT
CCTCAAGATAGCCAGCGCC-------TCATGACCGA-CCCCATATAAGTAGCCACGACCCCGCAAGCCCCTAA-C-ACCA
TAGCAACATGGGCAGCAACAACTTCGGAC----T----TCACGTACGCAAGTTTTCGATAAACCGATCTTAGTTTTCGAG
ACCTGATGGAGGAGAACAAGGGAGCGGCGGC---GGCGGTGCCAGACAAGGAGGCGGCGCAGGGGCCAGCGTCGTCGTAC
TTCAAGAAGACGGTGGACGAGGGCGCGAGGTTGGTGGAGCTGGCCAAGAGCCAGTACCAGCAGTTCACCGAGGTGCAGGC
GAAGGAGCAATGGGCGTGCATCAAGAACAAGGTCAGCTCCATGATCGGCGAGCCCATCTTCGGCCGGTCCAAGGGCGACT
CCAGCAGCAGCACGCCTCCGTCCGTCGAGTCGCAGTAGATCATCATCGTCATCTGGATGGCCTATTAGTAA---TTTAGT
CGCGTCTTGTTTCTCTCTGAGCACTTG----------------GACAAATTTCAGCATTATCAGTCTGCAGATATCATTT
TTTT--TAATT---TGTTTCATAAAAAAGTTTTAGAGTTGTGTGAATC--------------------------------
-----TACGTTCTAAATTTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr7A_832
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTATCATCCAGAGGTTAACGGG
ACGCTCTCTTTCTCTTCCTCGGCTCGGTTTCTGTTTCTTTCTTTTCTCCTACTCCAAGGCTGCGACG-CCCCGGCTTCCT
TCTCAAGACAGCCGGCGCC-------TCATGACCGA-CCCCATATAAGTAGGCACGACCCAGCAGCCC-CTGGCC-ACCA
TAGCAACAGAACCAGCAACATCTTCTTCCGACTT----TCACGTACACAAGTTTTCGATCAACCGATCTCGGTTTTCGGG
ACCTGATGGAGGAGAACAAGGGAGCGGCGG---------TGCCGGAGAAGGAGGCGGCGCAGGGGCCAACGTCGGCGTAC
TTCAAGAAGACGGTGGACGAGGGCGCGAGGTTGGTGGAGCTGGCCAAGGGCCAGTACCGGCAGTTCACCGAGGTGCAGGC
GAAGGAGCAATGGGCGTGCATCAAGAACAAGGTCAGCTCCATGATCGGCGAGCCCATCTTCGGCGGGTCCAAGGGCGACT
CCAGCAGGAGCACGCCGCCGTCCGTCGAGTCGCAGTAGATCATCATCGTCATCTAGATGCCCGATTAGTAA---TTTAGT
CGCGTCTTGTTTCTCTCTGAGCACTTG----------------GACAAATTTCAGCATTATCAGTCTGCAGATATCATAT
TTTT--TT--CAGATGTTTCACAAAAAAGTTTTAGAGCTGTGTGAATC--------------------------------
-----TACGTTCTACACTTTTGAATACCATAACAGATTCA-------AGTTG----TAAATCAAAATTCGAAATTATACA
TTAGATGGGTT----------------------AAGTCGGACCGGTCCTACTCAGCACCGTAGGACAGGAAT-ACACGTG
CCGTTCGATCCCTATC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr5D_1840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGGAAAGACCAATGATGATAAAACCTACCACGACTTTTCTCGTTTGGAAATC
TTAGCAGATTAAAATCACC-ACCTGCCAGAATAGGATAGGATAGGGATTATCTTTTGCCAGATTAACTAGCTCACGAAGA
AAGTCGGCCTTGAATTCATCCTGGGCTGCACCATACACCGCAACGAGAGTCCCTGTGAAGTTGTTGGCT--TTTTGATGG
ATATGGAGTTTAATATGATACTCACCATCCGAACTAGCCAACACATCCATAGTCCCAGTATTCACACCAAGTAATATGCC
-C-TAGAACGACCCCTAGGCGGATGTGAAATACAAGTGAAGTCTATGCCGCTCGAAAGACGGTTAATAAGAC--------
---TCACGTCTACCCGTTTCTGAAATAGCCAAAAAAT-CTAGATCATGTACTCCATTACAATATGTAATGGATAAATGTT
TAGCCAGGTCACCAAGACCTCTGCTATTATAAAACATGTCATTCATTAGGAAACAATGGAAGATTTAGAGCTTTTGGCCC
TCTTAGACGACTTTTGACCCTTTTTTGAATGGGAGGCTTTAGATTTACGTCCGG--------------------------
--------------------------------------------------------------------------ATGCTG
TAAGTTCATGCAACAAACTAAGCCCAGGTTCATCCAAGCCCACGCCCAAATCCTCTCCCACTACATGAGCTAGGAGTTGA
CCATCTAC--
>chr5A_1840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGGAAAGACCAATGACGATCAAACCTACCACGACTTTTCTCGTTTGGAAATC
TTAGCAGATTAAAATCACC-ACCTATC-----AGAATAGGACATGGATTATATTTTGCCAGATTAACCAGCTCACGAAGA
AAGTCGGCCTTGAATTCATCCTGGGCTGCACCATACAGAGCGACAAGAGTCCATGTGAAGTTGTTGACT--TTGTTATGG
ATATGGATTTTAATATGATATTTACCATTCGAACTAGCCAACACATCCATAGTCCTACTATTCACGCCAAGTAATATGCC
-C-TAGAATGACTCCTAGGCGAACGTGAAATACAAGTGAAGTCTATGCTGCTCGAAAGACGGTTAATAAGAT--------
---TCACGTCTACCCGTTTCTGAAATAGCAAAAAAATTCTAGATCATGCACCCTATTGCAATCCGCAATGAATAAATATT
TAGCCAAGTCACCAAGACCTCCGCTATTATAAAACATGTCATTCATTATGAAGCAATGGAAGATTTAGACATTTTGGCCC
TCTTAGATGACTTTTGACCCTTTTTCGAACGAGAGGCTTTAGATTTACATTGGG--------------------------
--------------------------------------------------------------------------ATGCTG
TAAGTTCATGCAACGAACTAAGCCCAGGTTCATCCAAGCCCACATCCAAATCCTCTTCCACTACATGAGCTAGGAGCTGG
CTATCTAC--
>chr1A_1840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGGAAAGGCCAATGATTATCAAACCTACCGGGGCTTTTCTCATTTGGAAATC
TAAGAAAATTGAAATCCCC-ACCTATA-----AGAATGGGGTAGGGATTATCTTTCGCCAGATTAACCAATTCACGGAGA
AGATCAGCCTTGAACTCGTCCTGGTCTGCCCCATACACGGCGACGAGGGTCCATGTGAAGTTGTCGGCT--TTGTTGCGA
ATATATAGCTTAACATGAAACTCACCATCCGAACTAGACAAAACATCCATAGTCCTTGCATTTACACCAAGTAAAATGCC
-CCCAGAAGAACCTCTAGGCGGTCGTGAAACCCAAGTGAAGTCTATCCCGCCAGAAAGACGATTAAGCAGACTTAC----
------CGTCTCCCCGTTTCAGAGATAGCCAGAAAAT-ATAAATTGTATTCCCTATTACATTCCGCAATGAATAAATGTT
TAGCCAAGTCACCAAGACCTCTTCTATTAAAAAACATTCCATTCATGAGGAAACAATAGGAGATTTAGAACATTTCGCCC
TCTTATGGGACTTATTATCTTTTTTTGAATGTGCGGTCTCTGATTTACGTCCAG--------------------------
--------------------------------------------------------------------------ATGTTG
CAAGCTCAATCAATGAGCTAAGCCCGTGTTGATCTAGGCCCACGTCCGAAACCGCTCCTACTAAATGAGAGAGTAGCTGA
CCTTCT----
>chr1B_1841
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GGAAAGGCCAATGATTATCAAACCTACCACGACTTTTCTCGTTTGGGAATC
TTAGCAAATTAAAATCACC-ACCTATC-----AGAATAGGATATGGGTTATCATTCGCCAGATTAACCACCTCACGAAGA
AAGTCGGCTTTGAACTCATCATGTGCTGCACCATACACGGCGACAAGGGTCCATGTGAAGTTGCCGGCCTCTTATTACGG
ATATGAAGTTTTATATGATACTCACCATCCGAACTAGCCAACACATCCATAGTTTCTGTATTCACGCCAAGTAATATGCC
-CCCAGAACGACCCCTAGGCGGACGCGAAACCCAAGTAAAGTCTATTCCACCAGAAAGACGGTTAAGAAGACATACCGAG
AAATCACGTCTACCTGTTTCAGAGATAGCCAAAAAAT-CTAGATTATGCTCCCTATTACAATCCGCAATGAATAAATGTT
TAGCCAAGTCACCAAGACCTCTGCTATTATAGAACATGCCATTCATTAGGAAACAAGTGGAGATTTAGATGTTTTGGCCC
TTTTAGAAGACTCATGACCCTTTTTCGAACGGGAGGCTTTAGATTTACGTCTGG--------------------------
--------------------------------------------------------------------------GTGCTG
TAAGTTCGTGTAATGAACTAAGCCCAGGTTCATCCAGGCCCACATCTGAAACCTCTCCCACTACATGGGCTAGGAGCTGA
CCATCTAC--
>SNPs
S----------S---------S------------S---------------------------------------------
------------S--------------SSSSSSSSSS-S-SSSSSSSSSSS--SSSSS-SS-SS-SS--SSSS-SSSSSS
SSSS-SSS-SSSS-SS-S-SSSSS-SSSS-SSSS-SS----SS-S---SSSSSSSS-S-S-SSSSS--SS-SSSSSS--S
---S-S-SSSSSSS-SSS-SSSS--SSSS-S-SSSSSSS-SSS-S-S---SS-S-SS--S--SSSSSSSSSSS-S-SSSS
-SSSSSSSS-SSS-SSSSSSSSSSSSS-SSSS-S-S-SSSS-S-SSSSSSSSSSSSSSSSSSSSSS-SSSSSSSSS-SSS
--SS-SSSS-SSS----SSSSS-SSSSS--SS-SSS-SS-SSS-SSSS-SSSSSSSS-SS---SSSSSSSSSSSSSSS--
SSSSSSSSSS-S--S-SS-SS-SS-SS-SSSSSSSSS-S--S-SS--SSS---S-SSSS-SS-S----------------
----------------S--------SSS-----------S-------------------------------S----S-S-
----------------SS--S-SSSSSS-SSS---SSS--S-S--S--SSSS-SSS--SSSSSSSSSS-S---SSSS-SS
SS-SSSSSSSSSSSSSSSSSSSSSSS-SSSSSS-SSSS-S-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---SS-----SSS-S--SSSSS--S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------------------------S---------------------------------------------------
---------------S-------------------------------------S--S-----------------------
----------------------------------SSSS---------SS--------S----------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------S-------------------S--------------------------------
--------------------------S-S---------------------------------------------------
-------------------------------------------------------------------------------S
-SSSSS--------S--------S--------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------------------------
---S---S------------------------------------------------------------------------
-----------S----SS-SSS-SSSS-SSS-S-S---SSSSSSS-SSS-S-S-SS-SS-SSSS-S---SS-SSSSSS-S
S-SSS-SSSSSS-S-SS-SS-S----SS-SSS-SSSSSS-SSSSSSSSSSSSS--S----S-------------S---SS
SSSSS----------S---SSSSSSSSS--------S----------S--------------------------S-----
-------------------S-----------------------------------------S------------------
-----------------------------------------------------------S--------------S-----
------------------------------------------S-------------------S-----------------
--------------------------S-------------------------S-S-------------------------
----------------------------------------------S----S------S---------------------
-------------S------------------------------------------------------------------
-------------S--S------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
-----------------------------------------------------------------S---S----------
------S-SS
>forward_469
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGTATGCCGCTGTTTGTAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CACGTTCGAAACCTCTCCCA----------------------------------------
--------------------------------------------------------------------------------
----------
