>input_sequence_74947
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-------------------------------------------------------------ATGGACGGATTCTCC-TTT
TATGTTGTGGACGTTGAGGAGAAAACTCTTGTTGTTATGGATCCAGCAGAGACAAGCATTCATGATGATGAGATGAGTGT
CAAACATGAGGGTAATGTGACCCAGGTACTAAAAATGCCTCGAACAGTCCTCCGTAATCACTTCGCAGACTGGGATGTCC
CAGAGCTCGGCTGGAGCATCATATATGCCTACAACATGAATGAGCCATGTAATATGTAAGTATTTTCCATTGCAAACAAC
ATCTAAGGCCTGCAAGAAAAATATCCATGG-CA-TTTTATCCATAACTTTGATCATTTGCAGCGAGGACAGCTGGATCTA
CCTTGGTCACTACTGGAGTACATACAATGGCCTGTATCTCGAGAGGCAGCTTGGTGAGGTGCGAAATGA-AAAACTGTAA
CTCGTGGATTTCAAATAATGAATCATTTTTTTGAAT--------TGGAGTGAGTAACTTG------------TTCATAAA
TTGTTTTGCAGTATGAGCTGGCTTACCTGAAGAAGCAGTTTGAGTATGAGGTGATTTCGATGAACGGCAACAAGGGTGAA
CTCCCAAGCTTCATGATCGAGGAAGTCCTGTTCTG----A----------------------------------------
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---------------------------
>chr7D_1_TraesCS7D01G051900
ATTTTTTTTA-ACGCATCTGCCTGTGAGAACCATCGAGTCCAGTTGGATAGTGATCCCTTGTTTCACACGCGAGCTACAT
ATCATAATTCTGGCAGAGGAACAGGTGAAAATCTGTGTTGTAATAAATTAGGACGTACAGAAATAAAATTTGTAATTTGA
TAACTTTGCGGGTTACTCACTGACAAAGAAGGAAATGTTGGTTGTGCAGGTCCTGTGTCGGAAAGAATGTCAAGGAATCT
GAGGTTACCAATTGGGATAGCAAGGCCTGAAGTGAAGGGTGAGATGGGTAGTGTGTTCCCTGGGAGAGCCGGCCTAGTAC
ATGAAATTCCAACTGCACAAAATGTATTGCAATTCTATGACAAGATGGTTCATAGTATGAGGAGTGATCGCGACAAGTGG
GCATTGGTAAAACGA---CAAATTTGTAAAGTACATGTGATTTCTTTGCTATGCCTAAACAGCTCTAC-CCCACCTGTGT
A-AAAATGTTTGCAGGAAATGGTTCAAGCACGTAT----GACCTTGGTCCTACTCAATGGGGATGATTTCATACATGAGT
TTGGTCCTGATGGAGAATTGACAACAATTGGCTGGGCAGCCTTCTCACGTATGCTGACTAGTAAAGATGCACGAATGTAC
GACGAATGGAAGATAAGGTGGAGGCATCTATTCGACATCCATTTTGTGGTACGGGCAACTTCCTTCACATGAAGTAGTAT
AGAAACTTTCTCTTTGAATGATGCCCAGGTACATGGAGTCAATTTGTAACATCAGTC-AAAATTGTGGAAAAAACAGGAA
CACCTGATGGAAAACTCGGATGACCTGGATTATGGCCTACTCGCAAGTATGATGGATGAGGATGTGCTTGGATACAAATT
ACAATGAACAAAGAAGGTATGT-AGATTATAGATGGAATATATGTCGTGTCACTATATCAGAAGGAAAATCA-------A
-TCTGACTCATGATTGCTTTGCATT-TTGCGAATGTGCAGTTGTTCCTTCCTGTACCATTGATGGACGGATTCTCC-TTT
TATGTTGTGGACGTTGAGGAGAAAACTCTTGTTGTTATGGATCCAGCAGAGACAAGCATTCATGATGATGAGATGAGTGT
CAAACATGAGGGTAATGTGACCCAGGTACTAAAAATGCCTCGAACAGTCCTCCGTAATCACTTCGCAGACTGGGATGTCC
CAGAGCTCGGCTGGAGCATCATATATGCCTACAACATGAATGAGCCATGTAATATGTAAGTATTTTCCATTGCAAACAAC
ATCTAAGGCCTGCAAGAAAAATATCCATGG-CA-TTTTATCCATAACTTTGATCATTTGCAGCGAGGACAGCTGGATCTA
CCTTGGTCACTACTGGAGTACATACAATGGCCTGTATCTCGAGAGGCAGCTTGGTGAGGTGCGAAATGA-AAAACTGTAA
CTCGTGGATTTCAAATAATGAATCATTTTTTTGAAT--------TGGAGTGAGTAACTTG------------TTCATAAA
TTGTTTTGCAGTATGAGCTGGCTTACCTGAAGAAGCAGTTTGAGTATGAGGTGATTTCGATGAACGGCAACAAGGGTGAA
CTCCCAAGCTTCATGATCGAGGAAGTCCTGTTCTG----AGCAAGGCAGACTTGGCTCTTTATCTACTAGTGTAAACTAT
GTGCTAAGGGTTTATGAAATGCGTACTTGCAGACTTAACTAGGTTTGGAAATCAAGCATAGTAGTGGTGA----TTGTTT
TAGCTCACATCCCTCCTGCTGGTGTGGGGGTGCAACATGCCCTGATATGCCGGCGTCGACCTTAACCCTGATAAGGGTGA
GGGTGTGTATTTTGTGTCCTGGAGTACAGGACTTTGGGATGGAACCTGTGTGGCTAGTTGTGCAGGCCATCTCATTTTGG
GGCTGTGTGGTTGGATCGAATCATTATGTGTGTACAAGACTTATTTCGTAGATGGAATGTGACGACGTTTTTAAATTCTT
GTTCTTCCGTTTGGTTTGAAATGCTATCAGCAAATCCCTATATCCTATCTGCAACAACAGAGTTGGTAAACTTACTACTG
ATATGTACAATTTTTAGTGGACTGGAGTTAAGCATTTTGGGGTTGCTGTGTGGTTGGAGGGAGTACATTGCGTCCTTGTT
GACTGG-AAAGGCAACAGATTGACAGAAAAAATAGGATGGTTGCCGTCGT----AAAAAAGGAGAGGCGTGTCGATTGAT
TTCGTGATGCCTCAATTTGTTAT--TTTGAAATATGCAGTTGGAAAATGGGAAGAATTCACATATGCAAAATACTGTGAA
ATGCATAATAACAACCATTGAAAAGTTTGCACATTTAACAAGCGAGGAAAAATGTTGATGTTGCTGGT------------
----TAAGTCGTGATAAGCATATGTAGGCATTTCAGGATTTATGTAACATGCCGTGGCGCACCCAACTGAACGGATTTTT
GGTGTAAACAGATGATGTGCATCATTCTGTATATTACATGGTCGAGCAGGGGTAGGGTGATAGATTAAAACCTGACACAT
GTATCTTACAACCCAAAATAAATCTACGATATTCCAGTGATCAAACTACGACAAATGGAGCTTGGTTTCAATAGACTCTC
ATAAGGGAAATGCAGCTCTCGCACACG
>chr2A_1
ATTTTATTTA-ACGCAGCTGCCTGTGATAACCGTCGAGTTGAGCTGGATAGTGATCCCCTATTTCACACGCGAGCTACAA
TTCATAATTCGGGTAGAGGAACGGGTGAAAAGATGTGTTGAAATAAATTAGGAGTTACAAAAATAAAATTTGTAATTCAA
TAACTTTGCGGGTTACTCAGTGACAAAGAATAATAAGTTGGTTGTGCAGGACCTGTTTCGGAAAGAATGTCAAGGAATCT
GAGCTTACCAATTGGGATAGCAAGGCCTGATGTGAAGGGTGAGATGGGTAGTGTGTTCCCTGGGAGAGCTGGCCTAGGTC
ATGAAATTCCAACTGCACGAAATGTATTGCAATCCTATGACAATATGGTTCATAGTATGAGGAGTGATCGCGACAGGTGG
GCACTGCTAAGACGA---CAATTTTATAAAGTACATGTGATTTCTTTTCTATGACTAAACATCTATGC-CACACCTATGT
ATAAAATGTTTGCAGGAAATGGTTCAAGCATGTATTCATGACCTTGGTCCTACTCAATGGGGATGATTTCATACATGAGT
TTGGTCCTGATGGAGAAATGACAACAATTGGCTGGGCAGCCTTCTCACGTATGCTGACTAGTAAAGATGCGCGAATGTAC
GGCAAATGGAAGATAAGGTGGATGCATCTATTCGACATCCGATTTGTGGTACGTGTAACTTCCTTGACATGAAGTAGTAT
AGAAACTTTCTCTTTGAATGATTCCTAGGTACATGGAGTCAATTTGTAACAGCAGTC-GAACTTGTGGAAAAAACAGGAA
CACCTAATGGAAAACTCGGATGCCTTGGATTATGGACTGCTTGCAAGTATGATGGATGAGTATGTTCTTGGATACAAATT
ACAATGGACAAGGAAGGTATGT-AGATTATAGATGGAATATATGTCATGTCACTAAATCAGAAAGAAA---AAATACATA
CCCCGACTCATGATTGCTTCGAATT-TTGTGAATGTGCAGTTGTTCCTTCTTGTACCGTTGATGGATGGATTCTCC-TTT
TATGTTATGGACGTTGAGGAGAAAACTATTGTTGTTATGGATCCAGCAGAGACAAGCATCCATGATGATGAGATGAGTGT
CAAACATGAGGGTAACACGACCCTAGTACTAAAAGCGCTTCGGAAAGTCCTCCGTAATCACTTCGCAGACTGGGATGTCC
CAGAACTCGGTTGGAGCATCATATATGCCTACAACATGAATGAGCCGTGTGATATGTAAGTATTTTCCAATGTAAACAAC
ATCTAACACCTACAAGCAAAAATTCCTTAG-GA-TGACATCCATAAATGTGATCATTTGCAGTGAGGACAGCTGGATCTA
CCTTGGTCACTACTGGAGGACATACAATGGCCTCTACCTCAAAA------------------------------CTGTAA
CTCGTGAAGTTCAAATAATGAATAAAAAATTTTGGGGGGGGGGATGGGGTGAGTAACTTG------------TTCATAAA
TTATTTTGTAGTATGAACCGGCTTACCTGAAGAAGTAGTTTGCGTATGAGGTGATTTCGATGAAGGGCAACAAAGGTGAA
CTCCCAAGCTTCATGATCGAGGAAGTCTTGTTCTG----AGCAAGTCAGACTTGGCTCTTTGTCCACTAGTGTAAATTAA
GTGCTAAGGGTTTACGAAATGTGTAGCTGCAGACTTAACTAGGTTTGGAAATCAAGCATAGTAGTGGTG----GTTGTTT
TAGCTCCTATCCCTCCTGCTGGTGTGGGGGTGCAACATACCATGATATGCCGGCGTCGACCTAAACCCTGATAAGGGTCA
GGGTGTGTATTTTGCGTCCTGGAGTACAGGATTTTGGGATGGAACCTATGTGGCTAGTTGTGCAGGCCATCTCATTTTGT
GTCTGTGTCATTGGGTCGGATCATTATGTGTGTACAAGACTTATTTCCTAGATGGAATGTGACGACGTTTTAAAATTCCC
GTTCTTCTGTTTGGTTTGATATTCTATCAGCAAATGCCTATATCCTATCTGCAACAACAGAGTTGGTGAACTTACTACTA
ATATGTACAATATCTAGTGGACTGGAGTTAAGCATTTTGGGGCTGTTGTGTGGTTGGAGTTAGTACATTGCCTCCTTGAT
ATCTAG-AAAGGCAACATATGG-CAGGAAAAACAGAATGGTTGCCGTCAGAAGAAAAAAATGCGAGGCGTGTTGATGGAT
TTCTTCATGCCTGAATTTGTTAT--TTTGAAATATGCAGTTCGAAAATGGGAAGATTTCACATATGCAAACTGCTGTGAA
ATGGATAATAACAACCACTGAAAAGTATGCACATTTAACAAGCAAGGATATATGTTGATGTCGCTGGT------------
----TAACTGGAGATAAGCATATGTAGGCATTTCAGGATTTATATAACAT-CCGTGGGGCACCCAACTGAACGTGTTTTT
GGTGTAAATAGATGATGTGCATCATTCTGTATATTACATGGTCGAGCAG-GGTAGGGTGATAGATTAAAACCTGACACAT
GTATGTTACAACCCAAAATAAAACTACGATATCCCATTGATCAAACTACGACACATGGAGCTTGGTTTGATTAGACTGTC
ATAAGGGAAATGCAGGTCTCGCACCCG
>chr5D_2
TTTTTGTTTCGACGCAGCAGCCTCTGAGAACATACTAGTCCAGCCGGATGCGGATCCCCTGTTTCAGACGCAAGGTGCAG
CTCATAGTTGTCAGAGAGGAACAGGTGAATACATGTGTTATAATATATTAGGATGTAAAGAAATAAAATTTTGAATTTAA
TAACTTAGTGGGTACTCACTG------------AATGTTGGCTGTGCAGGGCCTGTGTCGGAAAGAATGTCAAGGAATCT
GAGGTTGCCAATTTGGGTAGCAAGGCCTGAGGTAAAGGGTGAGATGGGTAGTTTGTTCCCTAGCAGAGCCGGCCTACGAC
ATGATATTCCAAATGCTGAAAATTTATTGCAATTCTACGAAAAGATGGTTCATAGTATGAGGAGTGATCGGGACAGGTGG
GAATTGCTAAGATGA---CAAAGTATTCAATTGTTTGTGATTTCTTTGAAATGAATTAATAGTTGTGCCCCTAT-TGTGT
A-AAAATGTTTGCAGGAAATGGTTCAAACACGTATTCATGACCTTCGTCCTGCTCAATGGGGATGATTTCATACATGAGT
TTGGCCCTGATGGAGAAATGACAACAATAGGCTGGACAGCGTTCTCACGTAGGCTGACTAGCAAAGATGCACGAATGTAC
GGCAAGTGGAAGATAAGGTGGAGGCATCTATTTGACATCCGTTTTGTGGTACGGTCAACTTCCTCCATATGATGTAGTAT
AGAAACTATCTCTTTTCATGATGCCCTAGTACATGGCGTCAATTCCTAACATCGGTTAAAACTTGTGAAAAAAACAGGAA
CACCTGATGGATAACTACGATGCCCTGGATTATGGCCTCCTAGCAAGTATGATGGATGAGGATGTTCTTGGATACAAATT
ACAATGGACAAAGAAGGTAAGA-AGATTATAGATGGAATATATTTCGTGTGACACTATCAGATGGAAAAACAATTACATA
-CCAGTCTGATGATTGCTTCACATTTTTGCGAATGTGCAGTTGTTCCTTCCTGTACCATTGATGGACGGATTCTCC-TTT
TATGTTGTGGAAGTTGAGGAGAAAACTCTTGTTGTTCTGGATCCAGCAGAGACAAGCATTCATGATGATGAGATGAGCAT
CAAACATGAGGATAACGCGACACTGGTACTAAAAACACTTCGGACAGTCCTCCGTAATCACTTCTCAGACTGAGATATAC
CAGAGCTCGGCTGGAGCATCATATATGGCTACAACATGAATGAGCCGTGTAATATGTAAGTATTTACCATCGCAAAAATC
ATCTAAGGCCTGCAAGAAAAATATCAAATAACA-TTACATGCAAACCTGTGATCATTTGTAGCGAGGACAGCTGGATATA
CCTTGGTCACTATTGGAGGTCATACAATGGACTGTATCTCCAAAGACAACTTGGTGAGGTACG-ATTTGGAACACTCTAG
ATCCTGTTGTCGAAGAAATGAATTTTTTTT------------GATGGAGTGAGTAACTTG------------CTCATAAA
TTGTTTTGCAGTACGAGCTGGCTTACCTGAAGAAACAGTTTGCGTATGAGGTGATTTCGATGAAGGGCAACAAAGGTGAA
CTCCCAAGCTTCATGATCCAGGATGTCTTGTTCTG----AGCTAGCCAGACTAGCGTCTTTATCTACTAGTGTACATTAT
GCGCTAAGGTTTTATAAAATGCGTACTTCCCGAATGAACTAGGTTTGGAAATCAAGCATAGTAGTGGTCA----TTGTTT
TAGCTCCCATCCCTCCTAGTGGTGCGGGGGTGCAATCTGCCCTGCTATGCCGGCAGTCGCTGCAG----GATAAGGGTGA
AGGTGTGTATTTTGCGTCCTGTAGTACAGGAATTTGTGATGGAACCTGTGTGGCTGGTTGTGCAGGCCATCTTATTTTGG
GTCTGTGTGGTTGGATTGAATCATTATGTGTGCACAAGACTTATTTCGTAGATGGAATGTGATGTTGTTTTAAAAAACTT
GTTTTTGCCTTTGGTG---AATGCTACCAACAAATGCCTACATCCTGTCTGCAACTTAAGACTGGT--------------
-TATGTAGATGTTTTAGTACCCTGGAATTAATGATTTTGGGGCTGCTGTGTGGTTGCATGCAGTAACGTACATCGTTTTT
GAATGAAAAAGGCAACAGATTAACATTAAAAACAGGTTGGTTGCCGTGTTAAAAATAT-----GAGACATGTCAATGGAT
GTCATGATGCATGAATTTGTTATCTTCTGAATAATGCAGTAGGTTAAAAGGCAGAATTCACATATCAAAAAATCTAGGGA
ATGGTTAATACCAACAATTCAAAATTGTGGACATATTAGTAGCAACGAAGAATGTTGAACATAAGTAGGCATTCAGGATA
TAGATAAGTCGTGCCAAGCAAATGTAGGCATTA-AGGATTTATATAACATGCCGTGGCTATCCCAACTGATAGGCTATTT
GGTGCGAACAAATGATGAGCATCATTCTACATATTACATGATGAAGCAG-GGTAGGGTGATGGATTAGAACCTGACGCAT
ATACCTTACAACCCAAAAGAAATCTAAGATAACCCAGTGATGAAACTACGATA-----------GTTTGTTTAGACTCTC
AAAAGTGAAATGCAGCTCTCGC-----
>chr3A_36
------------------------------------AGTTCAGTTGGATAGAGATCCGTTGGTTCAGAGAAGCACTAGAG
ATTAGAGTGCTGGCAGGGCAACAGGTGTAATTCTTTGTTATATTAATTCG---GATATAAGAAAAATATATGGAGGTTGA
AAACCTTTTTGATTGCTTAC--------AAGAAATTGTTGATTTTGCAGCACCTGTGTCGGAAAGAATGGCAATGAATCT
AAGGTTGCCAGTGGGGATAGTAAGGATTGAGGTGAAGGATGAGATGGGGGAAATGTTTCCTGGTAGAGTTGGGCTAAGAC
ATGAAATACGAATTGCTCAAAACGTACTGCAATTCTATGACAAAATGGTGCATAGTGTGAGGAGTGATCGTGACAGGTGG
GCCTTGCTATTTGTCCTTCATTTTGGTAATTTGCATGCGATT-CTATCAAAAAACTTAATACCTCTACACCCAAATGGGG
--AAAATATGTGCAGGAAATGGTTCAAGCACCTGGTCATGACCTTGGTCCTCCTCAATGGGGATGATTTCATACATGAGT
TTGGGCCTGATGGTCAATTAACAATACTTGGCTGGACAACCTTTTCACGTATGCTGATTAGTAAGGATGCACAGATGTAT
GGCAAATGGAAGATAAGGTGGAGGCATCTATTCAACATCCAATTTGTGGTATGAGCAACTATCTCATTTACTGGTAGTAG
ATAAAATTTTCATCAGG--GACACCCTGCTGTATAGACTCATTAGCTAACAGTAGAG-ACACTTGTT-----AACAGGAA
CACCTGATGTATAACTCTGATGACCTGAACTATGACCTTCTCGCCAGAATGATGGATGAAGATGTACTTCGGTACAAGTT
ACAGTGGACAATGAAGGTATGTGAAATGACAGTTGGATGATATTTCGTTGCATTGTAGGGAAAAAGGAATGAATTCCATA
CCTGTCTTCATGTTTGCTCTACTTT-TAAA-AATGTGCAGTTGTTCCTTCCTGCACCAATGATGGACGGATTCTCCTTTT
TATGTTGTGGACGTTGCGGAAAGAACTCTTCTTGGCATGGATCCAGCGGAGACGAGCATTCATGATGATGAGATGAGTGT
GAAACACGAGGGGAATGTGAACCTGGTACTGATAACACTTCAGAGAGTCCAAAGTGACCACTTCATAGACTGGTATGTTC
TGGAGGACGACTGGAGCGTCACATATGCCTACAACATGAAAGAGCCATGTGAGATGTTAGTATCTTGTTGTACAAGTACA
TCTG--GGCCTACAAAAAAAGACTTGTGCATGCCTGAGCTCTATATCTGTGATCCTTTGCAGCAAGGACAGATGGATCTA
CCTTGGGCACTACTGGAGGTACTACAATGGCATGTATCTTGAGAGGCAACCGGGTGAGGTACG-AAGAA-AAATGTGTAA
ATCCTAGAGATGAAAAGATGTATGATTTTT------------TTTGTGATTTGAAATGACTAACTGGTGAAACTCAAAAA
ATGTTTTCAAGAATGAGCTGGCTTACCTGCAGAAGCAGTTTGCGTACGAGGTGATTTCGATGAAGGGGAACAAGGGTGAA
CTCCCAAGCTTCATGATCGAGGATGTGCCATTCTTGGCAAGGAAGTAGTATTTGCCTCTTTATCTACTTATGTAA--TAT
GTGTTAATGTCGAATGAATTGTGTACTCGAAGTAGTAATTAGGTGCAAAATCCAACACAGTGGGGTGGGGTTTGTTGTCT
TAGCTCCCATCCCTCCTGCTGGTGTGGGGGTGCTTCTTGCCC--------------------------------------
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>chr3D_36
------------------------------------AGTTCAGTTGGATAGAGATCCGTTGGTTCAGAGAAGCACTAGAG
ATTACAATGCTGGAAGGGCAACAGGTGTAATTCTTTGTTATATTAATTCG---GATATAAGAAAAATATATGGAGGTTGA
AAACTTTTTTGATTGCCTAC--------AAGAAAATGTTGATTTTGCAGCACCTGTGTCTGAAAGAATGGCAAGGAATCT
GAGGTTGCCAGTGGGGATAGTAAGGATTGAGGTGAAGGATGAGATGGGGGAAATGTTTCCTGGTAGAGTTGGGCTAAGAC
ATGAAATACGAATTGCTCAAAATGTACTGCAATTCTATGACAAGATGGTGCATAGTGTGAGGAGTGATCGTGACAAGTGG
GCCTTGCTATTTGTCCTTCATTTTGGTAATGTGCATGCGATT-CTATCAAAAAACTTAATACCTCTACACCCAAATGGGG
A-AAAATGTGTGCAAGAAATGGTTCAAGCACCTGGTCATGACCTTGGTCCTCCTCAATGGGGATGATTTCATACATGAGT
TTAGGCCTGATGGTCAATTAACAATACTTGGCTGGACAACCTTTTCACGTATGCTGATTAGTAAGGATGCACGGATGTAT
GGCAAATGAAAGATAAGGTGGAGGCATCTATTCGACATCCGATTTGTGGTATGAGCAACTATCTCATTTACTGGTAGTAG
ATAAAATTTTCATCGGG--GACACCCTACTGTATAGACTCATTAGCTAACAGTAGAG-AAACTTGTT-----AACAGGAA
CACCTGATGTATAACTCTGATGACCTGAACTATGACCTTCTCGCCAGAATGATGGATGAAGATGTACTTCGGTACAAGTT
ACAGTGGACAATGAAGGTATGTGAAATGAAAGTTTGATGATATTTCGTTGCATTGTAGGGAAAAAGGAATGAATTCCATA
CCTGTCTTCATGTTTGCTTTACTTT-TAAA-AATGTGCAGTTGTTCCTTCCTGCACCAATGATGGACGGATTCTCCTTTT
TATGTTGTGGACGTTGCGGAAAGAACTCTTCTTGGCATGGATCCAGTGGAGACGAGCATTCATGATGATGAGATGAGTGT
GAAACACGAGGGGAATGTGAACCTGGTACTGAGAACACTTCAGAGAGTCCAACATGACCACTTCACAGACTGGTATGTTC
TGGAGGACGGCTGGAGCGTCACATATGCCTACAACATGAAAGAGCCATGTGAGATGTAAGTATCTTGTTGTGCGAGTACA
TCTG--GGCCTAC-AAAAAAGACTTGTGCATGCCTGAGCTCTATATCTGTGATCCTTTGCAGCAAGGACAGCTGGATCTA
CCTTGGGCACTACTGGAGGTACTACAATGGCCTGTATC------------CGGGTGAGGTACG-AATAA-AAATGTGTAA
ACCCTGGAGATGAAAAGATGTATGATTTTT------------TTTGTGATTTGAAATGACTAACTGGTGAAACTCAAAAA
ATGTTTTCAAGAATGAGCTGGCTTACCTGCAGAAGCAGTTTGCGTACGAGGTGATTTCGATGAAGGGGAACAAGGGTGAA
CTCCCAAGCTTCATGATCGAGGATGTGCCATTCTTGGCAAGGCAGTAATATTTGCCTCTTTATCTACTTATGTAAATTAT
GCGTTAATGTCGAATGAATTGTGTACTGGAAGTAGTAATTAGGTGCAAAATCCAACACAGTGGGGTGGGGTTTGTTGTCT
TAGCTCCCATCCCTCCTGC-------------------------------------------------------------
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>chr3D_36
------------------------------------AGTTCAGTTGGATAGAGATCCGTTGGTTCAGAGAAGCACTAGAG
ATTAGAATGCTGGCAGGGCAAAAGGTGTAATTCTTTGTTATATTAATTCG---GATATAAGAAATATATATGGAGGTTGA
AAACTTTTTTGATTGCTTAC--------AAGAAAATGTTGATTTTGCAGCACCTGTGTCGGAAAGAATGGCAAGGAATCT
GAGGTTGCCAGTGGGGATAGTAAGGATTGAGGTGAAGGATGAGATGGGGGAAATGTTTCCTGGTAGAGTTGGGCTAAGAC
ATGAAATACGAATTGCTCAAAATGTACTACAATTCTATGACAAAATGGTGCATAGTGTGAGGAGTGATCGTGACAAGTGG
GCCTTGCTATTTGTCCTTCATTTTGGTAATGTGCATGCGATT-CTATCAAAAAACTTAATACCTCTACACCCAAATGGGG
A-AAAATGTGTGCAGGAAATGGTTCAAGCACCTGGTCATGACCTTGGTCCTCCTCAATGGGGATGATTTCATACATGAGT
TTAGGCCTGATGGTCAATTAACAATACTTGGCTGGACAACCTTTTCACGTATGCTGATTAGTAAGGATGCACGGATGTAT
GGCAAATGGAAGATAAGGTGGAGGCATCTATTCGACATCCGATT-GTGGTATGAGCAACTATCTCATTTACTGGTAGTAG
ATAAAATTTTCATCGGG--GACACCCTACTGTATAGACTCATTAGCTAACAGTAGAG-AAACTTGTT-----AACATGAA
CACCTGATGTATAACTCTGATGACCTGAACTATGACCTTCTCGCCAGAATGATGGATGAAGATGTACTTCGGTACAAGTT
ACAGTGGACAATGAAGGTATGTGAAATGAAAGTTTGATGATATTTCGTTGCATTGTAGGGAAAAAGGAATGAATTCCATA
CCTGTCTTCATGTTTGCTTTACTTT-TAAA-AATGTGCAGTTGTTCCTTCCTGCACCAATGATGGACGGATTCTCCTTTT
TATGTTGTGGACGTTGCAGAAAGAACTCTTCTTGGCATGGATCCAACGGAGACGAGCATTCATGATGATGAGATGAGTGT
GAAACACGAGGGGAATGTGAACCTGGTACTGAGAACACTTCAGAGAGTCCAACGTGACCACTTCACAGACTGGTATGTTC
TGGAGGACGGCTGGAGCATCACGTATGCCTACAACATGAAAGAGCCATGTGAGATGTAAGTATCTTGTTGTGCGAGTACA
TCTG--GGCCTACAAAAAAAGACTTGTGCATGCCTGAGCTCTATATCTGTGATCCTTTGCAGCGAGGACAGCTGGATCTA
CCTTGGGCACTACTGGAGGTACTACAATGGCCTGTATC------------CGGGTGAGGTACG-AATAA-AAATGTGTAA
ACCCTGGAGATGAAAAGATGTATGTTTTTT------------TTTGTGATTTGAAATGACTAACTGGTGAAACTCAAAAA
ATGTTTTCAAGAATGAGCTGGCTTACCTGCAGAAGCAGTTTGCGTACGAGGTGATTTCGATGAAGGGGAACAAGGGTGAA
CTCCCAAGCTTCATGATCGAGGATGTGCCATTCTTGGCAAGGCAGTAGTATTTGCCTCTTTATCTACTTATGTAAATTAT
GCGTTAATGTCGAATGAATTGTGTACTGGAAGTAGTAATTAGGTGCAAAATCCAACACAGTGGGGTGGGGTTTGTTGTCT
TAGCTCCCATCCCTCCTGC-------------------------------------------------------------
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>SNPs
-----S----------S---------------S----------------------------------------------S
-----------------------------------------------------S--------------------------
-------------------------------S------------------S-----------------------------
------------------------------S----------------------------------------------S--
--------------------------------------------------------------------------------
------S---S------------------------------------------S--------------------------
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-S-S----------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------S--------------------------S--------------
------S-------------------------------------------------------------------------
-S-S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------S--S---S-------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------SS----------S-------------------------------
------------------S-----------------------------S-----------S--S---S------------
--------S--------------S--------SSSS--------------------------------------------
------------------------------------------S---------------------S---------------
---------------------------------------------S------------------------------S---
--------------------------------------------------------------------------------
------S-------------------------------------------------------S-----------------
--------------S----------------S------------------------------------------------
-S---------------------------------------------------------------------S--------
-----------------------------------S-------------------------------S-----------S
------------------------------------------S-----------------S----------S--------
--------------------------S-----S---------------S-----------S-S-------------S---
---S--------S-----------------------------------------------------------S-------
---S----------------------S----------------S------------------------------------
-------------------------------------------S------------------------------S-----
-------------------------------------------------S------------------------------
--------------------------------S--------------------S--------------S-S---------
------------------------S--
>forward_33
-------------GCATCTGCCTGTGAGAACCA-----------------------------------------------
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>reverse_1409
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------------------------------------------------GCTTGGTGAGGTGCGAAATG------------
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>forward_271
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-----------TTGGGATAGCAAGGCCTGAA-------------------------------------------------
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>reverse_2221
--------------------------------------------------------------------------------
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------------------------------------------------------------GGAGAGGCGTGTCGATTGAT
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---------------------------
