>input_sequence_74932
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----------------------------------------------------------------------ATGGTGGTCT
ACACGCAGGAGCACGTCTACCGGCACCCGTGGGACCGCGTGACGGCGGCGGCGTGGCGCAAGTTCACGGACCCGGCCTCC
CGCACGGCGCTCTCCCACGTCGCCGACGTGCACACCCTGCAGCGCCGCGTCGACACGGACGCCGGCCGCCTCCACGCCGC
GCGCTCCATCACCGTCCGCTCCCCGCCGCTCCCCTTCATCCTGCGCCGCCTCCTCCCGGCCGCCGCCGCCTCCCCCTCGG
GCGCCGCGATCTGCCACTGCGTCGAGACCTCCGTCGTCGACGCCCCGCGCCGCGCCATGGACATCGTCGTCCGCAACGTC
AGCCTCCGCGGGATCATCGAGGTCGAGGAGCGCTCCACCTTCCGGCCCCACCCGGACCGCCCCGATGATTGGACGCAGTT
CAGGCAGGAGACCACGATCCGGTGCCGCCCGCTCGCCAAGCTCGCCGCCGTCGCCGAGAAGGTCGAGACCCGCTGCGCCG
AAAGGTTCCTGCAGAACAGCGCCAAGGGGAGGGAGGTCGTCGAGCGGATCTGCCGCTACCTCGAGGCCGAGGCCGCCGGC
GCCGCGCCTTCCGCCGTCTGA-----------------------------------------------------------
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>chr6B_1_TraesCS6B01G310300
ATTTATGATAGGCGACCTTCGTCAAGACCATCTTTAAGTCAGTTGGAGAGAAAATCACCCACTTTTCCCAAAGACAAAAG
GGGCTAGAAAGGATGTAAAGAGAGCATTTGAAGTGCTTCAACCCGTTTTGCAATTGTTCGAGAAGCTAAAAAAATATGGG
ATCCAGAGATCTCATGTGAGGTGATGACAACCTGTGTCATTATGCACAACATGACTGTGGAGGATGCTAGTGAAGGACCT
GACGGGGATATGAAATCTGAGAACTTGAGTGACTCCATCCAACTCCTAGCTTAGAATCTAACCATGTCTGAGAAGTTTGT
CCAAATGTGTGAAAAAATTAGGCATTGAGCGACTTAAGAATAATCCGGTTGAGCATCTAT-----GAGCTGTTAAAAAGG
ACTCAAGTTTGGCTATTTAATTTAAAAACTTATTAATGTTTGAATTGTACTCCCTTTTTACCATAATATATGTCGTTTTA
GCAGTTCAATTTAAAGCAGTTCAATGTGAACTACTGAAACGACATATATGAAGGGAG-----------TAATATTTAAAT
TTAAACTATGCTTTATTTTGAAGTATTGCGGACTTAAAACAAATGCTTTGT---------GATATGATTGGATGGCCGAC
TCTCCTGTCTCGTCCCGTGAACACGTCTACGGACGGACAGTAAGTCCGTCTTGTGTTCAAGGAAGCGGATTTCGAACTAG
CCGCTTACCACGACACGTGGCAGGACAAGAGAAAACGCAACGGACACGGGGGACGGACCACCGCACCGCTCCCGGTTTCG
GGTCCGCCTTCCTCTCCAATCCAGCTTTCGCCTCACGGCCTACAA-GAACCGGCCCCCGTCCTCCGTCTTCCCCTTTCCT
ACCTCCCCTCGCCGCACCGCGCTAATCAAACCCTCGCCGCACCGCGCTAATCAAACCCTCGCCGCAAGTAAGAAATCGAG
GAGCGAAATCCAAAACCCCGCGAGCCAGCCGCCCGCCCGCTCACCCACCCGCCCGGA----CCCGCCGCCATGGTGGTCT
ACACGCAGGAGCACGTCTACCGGCACCCGTGGGACCGCGTGACGGCGGCGGCGTGGCGCAAGTTCACGGACCCGGCCTCC
CGCACGGCGCTCTCCCACGTCGCCGACGTGCACACCCTGCAGCGCCGCGTCGACACGGACGCCGGCCGCCTCCACGCCGC
GCGCTCCATCACCGTCCGCTCCCCGCCGCTCCCCTTCATCCTGCGCCGCCTCCTCCCGGCCGCCGCCGCCTCCCCCTCGG
GCGCCGCGATCTGCCACTGCGTCGAGACCTCCGTCGTCGACGCCCCGCGCCGCGCCATGGACATCGTCGTCCGCAACGTC
AGCCTCCGCGGGATCATCGAGGTCGAGGAGCGCTCCACCTTCCGGCCCCACCCGGACCGCCCCGATGATTGGACGCAGTT
CAGGCAGGAGACCACGATCCGGTGCCGCCCGCTCGCCAAGCTCGCCGCCGTCGCCGAGAAGGTCGAGACCCGCTGCGCCG
AAAGGTTCCTGCAGAACAGCGCCAAGGGGAGGGAGGTCGTCGAGCGGATCTGCCGCTACCTCGAGGCCGAGGCCGCCGGC
GCCGCGCCTTCCGCCGTCTGATCCGGCCTGGTTTGCGCCCCCCTTTCTTGGTCGTTCTGGATCTGATCGAATCGAAGGTT
TCGCTCGATCTGTGCTGCGGCTGAAGACCCAGGCCTCGCATCGAGGCCCTTTTTTGTTTGTTTTTTTGATTTCATTTTGT
TT-TGTATATGAGCTGAATCCTGAATGGAATAAAGCTTGTGAGCATAGACTTAATTGCTGTGTTGTATGTGGAGAAATTT
TAACCCTCTTTTGCGCATAATCTTGTTGAGCTACATTCTGATCTGCAACTCTGAAACCGCTGCATCTTATTGCGCCAATT
TGACAAATTGGGTTAACTGTTAACCCTGCTGTTGTCATGGGCTTTCTGTGAAGGGGCTATTCTATTCTGTGACATGTTGG
TTATCGAATATGGAAGGTGAGTAACTATGCGATTTAACATAGATGCGTCTGTTTAGCTGATTAGTC--------------
--------------------------------------------------GAAATCTATCTATGGCGCAATTGTGCTTAT
ACCTTTGACTAAGCTAGAACTTGTAATATGCTAGTGTGGATTTCATGATTCGTCTGAATCATGTCCCTAACACCAAATAA
GCCTGCAGCTCCTTGGATGCCTGAAAAGATTATGGCAATGGTTGATTCTTGTTATGACATGGATTGTTCTTCTGTTCTTG
GTCCAATATATCTTGATTTGGATGGACTGTGGACAGATTTTATGTCTGTTTTCATGGTGGTTAAGTAGTTATGTTGAATT
AGTTTAGTCAAATCTCCTCGGGTTCTTGCAAGTAAGAATTAAGACAGCTTGGAGTTCTTTTAAATGCAGCTTGCCTTGAA
CAAAAGAAAAACTGAGGCTGCTGCTGCTTACTAGCTTCTGTGAGAACGATCTTTGTGCTGCTGTTTTATTATGCTGTGTT
TCTTTGCTCCTGAACATATGATTTGTTGC---------------------------------------------------
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-------------TTGGTCTGCCTTCAAATTTGTTGCCTGATTTTCAAATCTTCTAGCACATGACATCTCATATTTAGCT
TTCTTTGCTTGATTTTGACTTCAACATTTA
>chr6A_8
-------ATAGACGACCTTCGTCAAGACCATCTTTGAGTCGGTTGGTGAGAAAATAACTCACTTTGCCCAAAGACAAAAG
GGGCTAGAAAAGGATATGGAGA--------AAGCACTCCAACCCGTTTTCCAGCTCTTCGAGAAGCTAAA-AAATATGGG
ATCCTGAGATCTCATGTGAGGTGATGACAACTTGTGTCATCACGCACAACATTACTGCGGAGGATGACAATGAAGGAGCC
GACGGAGATATGGATTTTGAGAACGTGAGTGACCCCATCCAACTTCTAGCTCAGA-------------------GTTTGT
CCCATTGCATCAACAGATTTGACATGGAGCAACTTAAGAATAATCTGATTGAGCATCTAT-----G-----TTAAAGAGG
ATTCAAGTTTGACTATTTTATGTAGAAACTTATTAATGTTTGAATTGTACTCCCTCCATATCATAATATACTTCATTTAG
CAGTAT-------------------------------------------------------------------TTTAAAT
TTAAACTATACTTTATTTTGAAGTATTGCGGACTTAAAAAGAAAAAGAACATATAGTACCGAGTCCGGGACGGTGTTGTT
GA--------------------------------------------CGTCTTGTGTTCAAGAAAGCGGACTTCAAACTAG
CCGCTTACCACGACACGTGGCAGGACGAGAGAAAACGCAACGGACACGGGGGACGGATCA--------CTCCCGGTTCCG
GGTCCGCCTTCCTCTCCAATCCAGCTTTCGCCTCACGGCCTACAAAGAACCGGCCCCCGTCCTCCGTCTTCCCCTTTCCT
ACCTCC-------------------------CCTCGCCGCGCCGCGCCAATCAAACCCTCGCCGCAAGTAAGAAATCGAG
GGGCGAAATCCAAAACCCCGCCAGCCAGCCG------------CCCACCCACCCGGA----CCCGCGGCCATGGTGGTCT
ACACGCAGGAGCACGTCTACCGGCACCCGTGGGACCGCGTGACGGCGGCGGCGTGGCGCAAGTTCACGGACCCGGCCTCC
CGCACGGCGCTCTCCCACGTCGCCGACGTGCACACCCTGCAGCGCCGCGTCGACACGGACGCCGGCCGCCTCCACGCCGC
GCGCTCCATCACCGTCCGCTCCCCGCCGCTCCCCTTCATCCTGCGCCGCCTCCTCCCGGCCGCCGCCGCCTCCCCCTCGG
GCGCCGCCATCTGCCACTGCGTCGAGACCTCGGTCGTCGACGCCCCGCGCCGCGCCATGGACGTCGTCGTCCGCAACGTC
AGCCTCCGCGGGATCATCGAGGTCGAGGAGCGATCCACCTTCCGCCCCCACCCGGACCGCCCCGACGACTGGACGCAGTT
CAGGCAGGAGACCACGATCCGGTGCCGCCCGCTCGCCAAGCTCGCCGCCGTCGCCGAGAAGGTCGAGACCCGCTGCGCCG
AGAGGTTCCTGCAGAACAGCGCCAAGGGGAGGGAGGTCGTCGAGCGGATCTGCCGCTACCTCGAGGCCGAGGCCGCCGGT
GCCGCGCCTTCCGCCGTCTGATCCGGCCTGGTTTGTGCCCCCTC-TCTTGGTCGTTCTGGATCTGATCGAATCGAAGGTT
TCGCTGGATCTGTGCTGCGGCTGAAGACCCAGGCCTCGCATCGAGGCCTTTTTTTGTTTGTTTTTTTAATTTCATTTTGT
TTTTGTATATGAGCTGAATCCTGAATGGAATAAAGCTTGTGAGCATAGACTTCATTGCTGTGTTGTATGTGGAGAAATTT
TAACCCTCTTTTGCGCATATTCTTGATGAGCTACATTCTGATCTGCAACTCTGAAACCGCTGCATCTTATTGCGCTAATT
TGACAAATTGGGTTAAATGTTAACCCTGCTGTTGTCATGGGCTATCTGTGAAGGGGCTATTCTATTCTGTGACATGTTGG
TTATTGAATATGGAAGATGAGTAACTATGCGATTTAACATAGATGTGTTTGTTTAGCTGATTAGTA--------------
--------------------------------------------------GAAATCTATCTATGGCGCAATTGTGCTTAT
ACCTTTGACTAATCTAGAACTTGTAGTATGCTA---------------------------ATGTCCCTAACAGCAAATAA
GCCTGCAGCTCCTTGGATGCCTAGAAAGATTACGGCAGTGGTTGATTCA------------------TCTTCTGTTCTTG
GCCCAATATAACTTGACTTGGATAGACCATGGACAGATTTCATGTCTGTTTTCATGGTTGGTAAGTAGTTATGTTGAATT
AGTTTAGTTG-ATCTCCTTGAGTTCTCGCAATTAAGAATTAAGATAGCTTGGAGTTCTTTTAAATGCAGCCTGCCTTGAA
CAAAAAAATGTTGAG-------GCTGCTTACTAGCTTCTGTGAGAATGATCTTTGTGCTGCGGTTTTATTATGACGTGTT
TCTTTACTCCTGAAAAAACCAATGTATTCTGTCCGCTGAATGCTTATAATTGGGCATTAGAGTGACCTGAATTTAGTTGC
ATAGTTTCCTGGAGGGATGAAAATATAATGTGTTGTGAGATGTTTGGATCTCAACAATAATAAGGATTACATTTAGCCAT
CCTTTTATACTCGTACATGTCTATATCCTTCCCAACTAGATGCAGCTTCTACTTTCTTGTGATGATCAATTGTTAGTTCC
ATTTGATCGGTTTCAATGATAGTTCAAATGATTTAATTCAACATCTTTGTTAGGGGCAATGTGGGTATGGGCAACCACTT
AGCTCAGAAAACACCTAAACCAGGAATGCTCGGTATGCATTTTTGTCGGCGGAAAATTGTGCATTGAGCCAATCTAGTAG
ATTTGACTCTATTTTGGCCTGCCTATGAATTTGTTGCTTGGTTTTTAAAC-----------------CTCATATTTAGCT
TTCTTTGCTTGATTT-GACTCCAACATTTA
>chr6D_9
--------TAGGCGACCTTCGTCAAGACCATCTTTGAGTCAGTTGGGGAGAAAATAACCCACTTTTCCCAAAGACAAAAG
GGGCTAGAAAGGA-------------------GTGCTCCAACCCGTTT-GCAGTTGTTCGAGAAGCTAAA-AAGTATGGA
ATCCAGAGATCTCATGTGAGGTGATGACAACTTGTGTCATCATGCACAACATGACTATGAAGGATGACAGTGAAGGAGCT
GGCGGAGATATGGAATTTGAGAACGTGAGTGACCCCATCCAAATTCGAGCTCAGAATCTGCCCATGTTTGAGGAGTTTGT
CTAAATGCATCAACAGATTTGACATTGAGCGACTTAAGAATAATCTGATTGAGCATCTATAAGCGG-----TTAAAGAGG
ATTTAAGTTTGGCTATTTTATTTAAAAACT---TAATGTTTGAATTGTACTGCCTTCTTACCATAATATATGTGGTGTTA
GCAGTTCATTTGAGCTACT-----------------AAACAACATATATGATGATACAGAGGGAATAATAATATTTTAAA
TTAAACTATACTTTATTTTGGGGCATTGCGGACTTAGAACAAACGTTTAATGGATAATTGGATGTGATTGGACTCCCCTA
TCA---------------GAACGCGTCTGCGCACGGAGTGTGAGTCCGTCTTGTGTTCAAGAAAGCGGACTTCAAACTAG
CCGCTTACCACGACACGTGGCAGGACGAGAGAAAACGCAACGGACACGGGGGACGGGCCACCGCACCGCTCCCGGCTTCG
GGTCCGCCTTCCTCTCCAATCCAGCTTTCGCCTCACGGCCTAC-AAGAGCCGGCCCCCCTCCTCCGTCTTCCCCTTTCCT
ACCTCC-------------------------CCTCGCCGCACCGCGCGAATCAAACCCTCGCCGCAAGTAAGAAATCGAG
GGGCGAAATCCAAAACCCCGCGAGCCAGCCCGCCAGC----CACCCACCCACCCGGACCCGCCCGCGGCCATGGTGGTCT
ACACGCAGGAGCACGTCTACCAGCACCCGTGGGACCGCGTGACGGCGGCGGCGTGGCGCAAGTTCACGGACCCGGCCTCC
CGCACGGCGCTCTCCCACGTCGCCGACGTGCACACCCTGCAGCGCCGCGTCGACACGGACGCCGGCCGCCTCCACGCCGC
GCGCTCCATCACCGTCCGCTCCCCGCCGCTCCCCTTCATCCTGCGCCGCCTCCTCCCGGCCGCCGCCGCCTCCCCCTCGG
GCGCCGCGATCTGCCACTGCGTCGAGACCTCCGTCGTCGACGCCCCACGCCGCGCCATGGACATCGTCGTCCGCAACGTC
AGCCTCCGCGGGATCATCGAGGTCGAGGAGCGATCCACCTTCCGCCCCCACCCGGACCGCCCCGACGACTGGACGCAGTT
CAGGCAGGAGACCACGATCCGGTGCCGCCCGCTCGCCAAGCTCGCCGCCGTCGCCGAGAAGGTCGAGACCCGCTGCGCCG
AGAGGTTCCTGCAGAACAGCGCCAAGGGGAGGGAGGTCGTCGAGCGGATCTGCCGCTACCTCGAGGCCGAGGCCGCCGGC
GCCGCGCCTTCCGCCGTCTGATCCGGCCTGGTTTGCGCCCCCTC-TCTTGGCCGTTCTGGATCTGATCGAATCCAAGGTT
CCGCTCGATCTGTGCTGCGGCTGAAGACCCAGGCCTCGCATCGAGGCCCTTTTTTGTTTGTTTTTTTAATTTCATTTTGT
TTT-GTATATGAGCTGAATCCTGAATGGAATAAAGCTTGTGAGCATAGACTTCATTGCTGTGTTGTATGTGGAGAAATTT
TAACCCTCTTTTGCGCATATTCTTGTTGAGCTACATTCTGATCTGCAACA------------------------------
--------------------------------TGTCATGGGCTTTCTGTGAAGGGGCTATTCTATTCTGTGACATGTTGG
TTATTGAATATGGAAGATGAGTAACTATGCGATTTAACATAGATGTGTCTGTTTAGCTGATTAGTACTCCCTCCGTCCCA
TAATATAACTAGTGTTAAAAACGCTCTTATATTATGGTACGGAGGGAGTAGAAATCTATCTATGGCGCAATTATGCTTAT
ACCTTTGACTAGGCTAGAACTTGTAATATGCTAGTGTGGAATTCATGATTCATCTGAATCATGTCCCTAACAGCAAATAA
GCCTGCAGCTCCTTGGATGCCTAAAAAGATTATGGCAGTGGTTGATTCTTGTTATGACATGGATTGTTCCTCTGTTCTTG
GCCCAATATAACTTGATTTGGATGTACTGTGGACAGATTTCATGTCTGTTTTCATGGTGGTTAAGTAGTTATGTTGAATT
AGTTTAGTCG-ACCTCCTTGAGTTCTTGCAAGTAAGAATTAAGGCAGCTTGGAGTTCTTTTAAATGCAGCTTGCCTTGAA
CAAAAAAAAAAACCCGAGGCTACTTAC-TAGTAGCTTCTGTGAGAACGATCTTTGTGCTGCTGTTTTGTTATGCTGTGTT
TCTTTGCTCCTGAATAAATGATTTGTTGC---------------------------------------------------
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-------------TTGGTCTGCCTGCAAATTTGTTGCGTGCTGTTTAAATCTTCTAGCACATGACATCTCATATTTAGCT
TTCTTTGCTTGATTTTGACCTCAACATTTA
>SNPs
SSSSSSS----------------------------S----------S--------S------------------------
-------------SSSSSSSSSSSSSSSSS-------S--------------S-----------------S---------
-------------------------------S--------S-------------------------SS---------S--
-----S------S---S-------S--------S----------S------S-------SS------S----S-------
-------SS-S--S-S---S-S-----------------------S-S------------------SSSSS-----S---
-S----------------S-------------------------------------S-----------------------
--------S--S-SSSSSSSSSSSSSSSSSSSSSSS----S----------S-SS-S-----------------------
---------S---------------------------------S-S--SS-------------S--------SS----SS
--SSSSSSSSSSSSSSSS----S-----S--S-----SS--S-------------------S-------S---S------
--------------------------S-----------------------------------------------------
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------SSSSSSSSSSSSSSSSSSSSSSSSS----------------S--------------------------------
-S-----------------------------S--SS-SSSS---------S---------------S-------------
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--------------------------------S-----------S--------------------S--S-----------
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-S------------------------------------------------------------------------------
------------------------------------------SSS-----------------------------------
-------------------------------------------------------------------S------------
----------------------------------------------------S---------------------------
-------------------S-------------------------------------------------------S----
----------------S---------------------------------------------------------------
----S-----------S----------------------------S-------------------S--------------
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----------------------------------------S----------S--------------------S-------
----------------------S--------------S------------------------------------------
-S--------S-----------------------------S---------------------------------------
---------SS-------S-S-----------------------------------------------------------
-----S-----SSSS-SSSSSS----------------------------------------------------------
--------------S-S---------------------------------------------------------------
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------------------------S------------S--S----S----------------------------------
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>forward_645
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-----------------------------------------------------------------GATTGGATGGCCGAC
TCTCC---------------------------------------------------------------------------
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>reverse_2494
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-------------GAGGCTGCTGCTGCTTACTA-----------------------------------------------
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