>input_sequence_74931
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---------------------------------------------ATGGCCAAGACTTGCTTCAAGACCGAGCACCCCCT
GGAAAGGAGGCAAGCTGAATCTGCTAGGATCCGTGAGAAGTACGCTGACAGAATTCCGGTGATCGTTGAGAAGGCTGATA
AGTCTGATCTCCCGAAAATTGATAAGAG---GTACCTTGTCCCTAACGAGATGCTAAACCCGCCAGTCCGCGACCCATCT
CGCCTCAACGAGCGTAGTTCTACTATGGCTGGCGCACCGTTCTGCTGTTGCGGCCTCAAGCCGGCGCCCCCGAGCTTCCT
CCTCTGCCATGGCTCTTCGCGGCTGCCACACAAACACGGCATGTCACCGCGGCCTACTTCAACTCGCCCGCTTTCTCCCG
TGCGCCCGTGTCACTGCCTCTGCTATCCCATGGCTGCGCACTGCCCCGAGCCTCGCCATGGCCGTGCGTCTCCTCCACTG
GCAGGCCCGCCACCAAGCACCTCCTCTGCATGGCTCGTGCGCCTCTGTCTCGGCCACCGGCCGCAGCCGTGCCTCGCCTA
CCGCGCTTCTCCGCGGCATCGGCTCCCCGGTCGTCCAGCGCCCGCCTGTCGGCGGCTGACCCCTCTGGTGCTACTCTAG-
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>chr6B_1_TraesCS6B01G214000
CTGTGAGTACACGATGCAAACAAAAGGAAAGGAAACCTGGAAGACCGGTCAAAACTCCTTGGCTGCCGAGGCGAATTCAA
CCTACTAGCGCAATGGATGAAAAGTGTTTTTGCACAAACTTCAAGGACCTACTCCATGACATTGCATGTGAGACCAAAAG
CAATCCAAAAAAGAGTCAACCCAGGCGACCACCTGACGGTTCAATATCCAATACGATAGCCATAGATTCAGTGAGCGGAC
ATAGAGGTGTTCAGACAAGCCATTGTGGGGATCATGCAAAAAGAAGTGTAGTATAATCATGGGAGGAGCACGAGCTGAAG
ACTAGCAAAATCCGGAGCCAGGTTGCTGTTGTTCCCCATGGTACATCAAAGGAATACACTGACGAGGGTTCTCCAAACCA
ACCATAACTGGGAGGAGGACAGGGACGAGAGTCAATCAAACCGGTTATGAAACAGAAAGCGGGCGCGGACTCGATTCCCC
GCCAGAACACCAAGTCGCCAGACTCGCCTTTTAGGACGCCGCCTCTGCCCTGCCCTGGCTCGCCCTTCTCACCTCCTGCT
CGCCCCGCTGTCCCTCGTCTCGACCTGCCTCTGCCA-----AGTCGCCCGACCCTGCCACCGGGTTACCTTTGCCGGCTT
CGCTTCAAAGCATGACTCCGCGCCGAGTCCTCTCTCCAACACCTGAGTCGCCTCCGCCTCCGTGGAGCCGCAGTCCTGGT
GTTGAACCGCCGCCAGATCAAGTCGACCTGGCCTTGCTGCAGCCCCTACGGTCGTCCGAGTTATAATTGCCAAGTGCCCG
CCTCGGTTTGAGTCACCACTTGGTCAGCAGAGGCCTGACCCGCCGAGCCTTTCTGCTTTTGCGCCGATTCAGCGCTGGTA
CAAGCCAGCCCTGTTACAAACTTCCACCGCTGCAGCTTCGGGCCGGCCATACCTCTGTTGCCGCCCGCGTGACTCAAGGC
GCCTCTACTTCCAAGCCCCCGGCTGCGCCCTTCCGTCGGTTGGAGATGGCCAAGACTTGCTTCAAGACCGAGCACCCCCT
GGAAAGGAGGCAAGCTGAATCTGCTAGGATCCGTGAGAAGTACGCTGACAGAATTCCGGTGATCGTTGAGAAGGCTGATA
AGTCTGATCTCCCGAAAATTGATAAGAG---GTACCTTGTCCCTAACGAGATGCTAAACCCGCCAGTCCGCGACCCATCT
CGCCTCAACGAGCGTAGTTCTACTATGGCTGGCGCACCGTTCTGCTGTTGCGGCCTCAAGCCGGCGCCCCCGAGCTTCCT
CCTCTGCCATGGCTCTTCGCGGCTGCCACACAAACACGGCATGTCACCGCGGCCTACTTCAACTCGCCCGCTTTCTCCCG
TGCGCCCGTGTCACTGCCTCTGCTATCCCATGGCTGCGCACTGCCCCGAGCCTCGCCATGGCCGTGCGTCTCCTCCACTG
GCAGGCCCGCCACCAAGCACCTCCTCTGCATGGCTCGTGCGCCTCTGTCTCGGCCACCGGCCGCAGCCGTGCCTCGCCTA
CCGCGCTTCTCCGCGGCATCGGCTCCCCGGTCGTCCAGCGCCCGCCTGTCGGCGGCTGACCCCTCTGGTGCTACTCTAGG
GCGCACAGCCCTCTTCCGACGTCCTGCGATGGAGCCACCCGTAGCTCCCTACTCCTTGCTGCTTTCCACCAACTGCGCCG
CATCGCTCGTGCTCCCCTCCTCGTCACGCCGGGCCGCCTCCGCCCGTAGGACGACGTCCACTCCGCGCGTTCAGGCTGCC
TGTTGGCTCCGCTCACCGTGCCTGCTTGGCTGGCTTCCGCCTCCCGTCAGCTCGTCCCTGCCCTGTCCGGCCTCCAGCGA
CCCGACTGCGCCCGCTCGACGGCTCTTCCCGTCCGGCGTCCTGCATCCCAGCCACGCTGCTGCGTTGTCCGCGCCCGCGA
TGCTTCTCCGCGTCCGCGCCCGTCACCGCTGGTTAAACCGCTGCGGGTTAAAGCGCTGCACCAACCTCTCTTCGAGCCAC
CGCTGTGGGTCATCGCACTCGCAGACTTGCAAAACTACCGTTTGCACGCCCGTGGGCCTTCGATCCAAGTCAAGGCCCAT
TCTGCTTTGCCCCCGCGGCTTTGCGCTAAGTCGCTGTCACCAGGCCGATGGCCGCCGGTCCTGGTTGTCGCCTCTGCAAT
GAAGTCGCAGACGCGCCTCTGCTTCCGCACTGCTTCCGGGTCACGGAAGGACTTGGCCTCGCTTACCACCAACCAAGTTT
CTGCCTTGAACCGCCGCAACCTTCGTTCCACAACCCGATCGTGCTCCGCCGGATTTCGCCTCGGTCCGCATGGCAGTCTT
CTGTTTTGGCCTCATTTTGAACCGCCGGATGCTGTTGTCGCCGTCGCCTTACCACCTTGTGACAAGACGATGCTCTATCT
TCACTGTGGTGGCGGGTCATGCATTACCGTGGCCTTGAACCACCGTCGCCGTTTTCCTCATGATGCCCTGAGTCACTATG
TTGGATGCCGGCCCGTCTCCGCTTCATGAACCATCTTGAGCTGCCGCGAGTCTCCCGTGAACCGCTCTGACTTCCGCCGG
TTCACCTTTGCTACTACGGACTCGACCGATGTGACCCAT
>chr1B_1
CTGTGAGTACACGATGCAAACACAAGGAAAGGAAACCTGGAAGACCGGCCAAAACTCCTTGGCTGCCGAGGCGAATTCAA
CCTACTAGCGCAATGGATGAAAGGTGTTCTTGCACAAACTTCAAGGACCTACTCCAAGACATTGCACGTGAGACCAAAAG
CAATCCAAAAAAGAGTCAACCCAGGCGACCACCTGACAGTTCAATATCCAATACGATAGCCATAGATTCATTGAGCGAAC
ACAGAGGTGTTCAGACAAGGCATTATGGGGATCATGCAAAAAGAAGTGTAGTATAATCATGGGAGGAGCATGAGCTGAAG
ACTAGCAAAATCCGGAGCCAGGTTGCTGTTGTTCCCCATGGTACATCAAAGGAGTACGCTGACGAGGGTTCTCCAAACCA
ACCACAACTGGGAGGAGGACAGGGACGAGAGTCAATCAAACCGGTTATGAAATAGAAAGCGGGCGCGAACTCGATTCCCC
GCCAGAACACCAAGTCGCCAGACTTTGCTTTTAGGACACCGCCTCCGCTCGCTCCGGCTCGCCTTG-CTCACCTCCTGCT
CGCCCCGTTGTCCCTCGTCTCGACCCGACTCCACTCTGTGGAGTCGCCCGACCCTGCCGCCGGGTTACCTTTGTCGACTT
CGCTTC-AAGCACGACCCCACGCCAAGTCCTCTCTCCCACGCCTGAGTCGCCTCCGCCTCCGTGGAGACACAGTCCCGGT
GTTGAACCACCGTCGGATCAAGTCGACCTAGGCTTGCCGCAGCCCCTGCGGACGTCCGAGTTATAATTGCCAAGTGCCCG
CCTCGGTTTGAGTCGCCACTTGGCCAGCCGGGGCCTGACCTGCTGAGCCTTTCTGCTTCTGTGCCGATTCAGCACTGGTA
CAAGCCGACCCTGTTACAAACTTCCACCGCTGCATCTTTGGGCCGGCCATACCTCTGTTGCCGCCCGCGTGACTCAAGGC
GCCCCTACTTCCAAGCCCCCGGCTATGCCCTTCCGTCGGTTGGAGATGGCCAAGACTTGCTTCAAGACCGAGCACCCGCT
AGAAAGGAGGCAAGCTGAATCTGCTAGGATCCGTGAGAAGTACGCTGACAGAATTCTGGTGATCGTTGAGAAGGCTGATA
AGTCCGATGTCCCGGAAATTGATAAGAAGAAGTACCTTGTCCCTGACGAGCTGCTAAACCCGCCAGTCCATGACCCATCT
CGCCTCGACGACCGCAGTTCTACTATGGCTGGCGCACCATTCTGCTGTTGCAGCCTCAAGCCGGCGCCCCCGAGCTTCCT
CCTCTGCCATGCATCTTCGCGGCCGCCACACAAACATGGCCTGTCACCACGGCCTACTTCAACTCGCCCGCTTCTCCCG-
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>chr2B_1390
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-------------------------------------GCACTGCCCCGAGCCTCGCCATGGTCGTGCGTCTCCTCTGCTG
GCAGGCCCGCCGCCAAGCACCTCCTCTGCATGGCTTGTGCGCCTCCGTCTCGACCATCGGACACGGCTGTGCCTCGCCTA
CCGTGCTTCTTCGCGGCGTCAGCTCCCCGGTCGTCCAGCGCCCGCCTGTCGGCGGCTGACCCCTCTGGTGCTACTCTGGG
GCGCACGGCCCTCCTCCGATGTCCTGTGATGGAGCCACCCGTGGCTCCCTACTCGTTGCTACCTTCCACCAACCGCGCCG
CATCGCTCGCGCTCCCCTCCTCGTCGCGATGGGCCGCCTCCGCC-GTAGGCCGGCGTCCATTCCGCGCGTTCGGGCTGCC
TGTCGGCTCCGCTCGCCGCGCCTGCTTGGCTGGCTTCGGCCTCCCGCCGGCTCGTCCCTGCCCTGTCCGGCCTCCAGCGA
CCCGGCTGCGCCCGCTCGACGAATCTGCCCGTCCGGCGTCCTGCGTCCCGGCCATGCTGCCGCGTCGTCCGCGCTCGCGA
CGCTTCTCCGTGTCCGCGCCCGTCACCTCTGGTTAA--------------------------------------------
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>SNPs
----------------------S-------------------------S-------------------------------
----------------------S-----S---------------------------S---------S-------------
-------------------------------------S--------------------------------S------S--
-S-----------------S----S---------------------------------------------S---------
-----------------------------------------------------S---S----------------------
----S-----------------------------------------------S--------------S------------
------------------------SSS----------S-------S--S-SSS--S-SSSSS-SSSS-------------
-------S-----------------S-S---SS-SS----------------------S--------------S--S---
------S-----S---S--S----S------------S--S--------------------------S-S------S---
--------S---S-S--------------S-S-----S---------S---S----------------------------
--------------S--------S----S-S---------S--S--------------S--S-----------S------
------SS--------------------------S---S-----------------------------------------
---S--------------------SS---------------------------------------------------S--
S-------------------------------------------------------S-----------------------
----S---S-----S------------S----------------S-----S------------------SS---------
------S----S--S-----------------------S------------S----------------------------
-----------SS----------S------------S---S-------S------------------------SSS--SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S-------------SS---
-----------S-----------------------S---------S------S---S---S-S-S--S------------
---S------S------S--S--------------------------------------------------------S--
------S------S-----S------S---------------S-----------S-----S-S----------S------
---------S---------------S--SS--------------S-----S--S------S-----------S-------
---S----------S---S------------------S--------S-S-------------------------------
----S----------------SS---S-----------------S----S----S-----S----S--------S-----
S---------S----------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_862
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------------------------------------------CCGAGCCTTTCTGCTTTTGC------------------
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>reverse_2256
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---------------GCAACCTTCGTTCCACAACC---------------------------------------------
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