>input_sequence_74904
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---ATGGCCAAGATCCAGCCCCTCCCTGCGCCCCCCTCGC---CGTCGTCCTCCGATGATCACCTCCAGGGCCAGCGGGC
CAGGCAGGCATACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTCTACGGCCCCGACGGCAGCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCCTCATGGACCGCGCCGGCAACGCCCTCATC
AGGTTCAGGCGCAAGGGCTTCGGCATGTTCAGGAGATGGGAGGTCTGCCGGTA---------------TGAGG-------
--------AGGG---GGAGGAGGCGACGGCGTGGTTCAGCGTTCGGCGGGCCAAGAAGGGCGGGGCCGCCGTGGCGATGC
ACGGCGGCGCAGCGACCTGCTACAGGATCGACGGGGGCT---GTGC------GCGCAAGCCTGAGTACAGAGTGAGCGGT
GTAGATGGCTCGGTCGTGGCGGAGGTGGCGCGGAAGCAGACGGCGGCGGGGGTGGTGCTGGGGGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAAATGGATCAGCTGCTCGCCCTGGGCTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
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>chr3D_1_TraesCS3D01G442200
ATATGGAGATCTC-------------------------------------------------------------------
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------------------------------------------------CCGTTGCGACGATATAGTTTACGCTGCATTAT
TAGCAGAGTTG------TAGTTGCTGGTCTGCACAAGCTTCCCTCCCAA-------CCTCCCGGTTTTGTGGAAGGCCTT
GCTTTGTTTAACAGGTCCGGTTTCTAACTCGGTGAATTGGTATGGTCCGGCAGCATTTTCCTTGTGAGTTT-------GA
AGCTAATTAGTTAGGTGGTAGCCGATTCTTCAGAATTCGA----------------------------------------
--------------------------------TCTCAGTTTTATATAGTTCACGC------TGCATATCCTTTTTCTGTC
AGAGCTGGTGGCGGATTTCAC--TAATCCAGCAAGAGCGTGAGTAAAATAAAAAATCACAGCTTCTTATTCTCAAGCAGT
TCTGCTTACTGAAAAA------GAAAAGAAAAGAAAAACTTTGTTCAATTCTGCAATGTGCGTACATAAAGTGATGTTGT
TATAGACAAAACAAAGTTGAGGGCCTGACATGAGACAAGGGGGGGACACAACGACTCAAGTTTGTCGCCCCACG------
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---------GTCATGAACACTTAAT-------------------------------------------------------
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--------GGAAAACGAGAGAAAACCGAACTGGCCCGAATGCT---TAATTAATCGATTAGGTGCAAGTACTTATCCTTC
CTTCAGGCAGCTAAC-------------------------------GTACATGGCTACATGCCTGCTTTCTTTCTACTCG
CCA-----------------------------------------------------------------------------
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----AAACAAAAC--AATCTATTTTTTGACATATATGGG----------TCGAAATAGTACGTTTCGATCATCCATTTTT
AAACTTGATCT---------------------------------------------------------------------
---CACACATGTTGAGCATTGCATTACATTGTGGTTTTAATTATATATCCATGTTTCAACTCTTG-ATGAATCACCAAAC
GTGGTGCT--AATCGCATGCTGATTCGTACTACAGTACTAGTAGATGACTAGATGGAGCATAAACAACTTTGGT-GCC--
GCACTATTCTATCCCAAGGTGTGACGCTCACAACACTGCCATTAACAAAATCCAGAC-----------------------
---------------CCTGAATAAATAGGCCA----------------------------------AACAGCAGCAGCAG
AGCA-----GGGCCGAGCGGAGCCGAGCAGAGCAA-----------TCTTCTTCTTCTTCGT-----------TCTCTCT
TCAATGGCCAAGATCCAGCCCCTCCCTGCGCCCCCCTCGC---CGTCGTCCTCCGATGATCACCTCCAGGGCCAGCGGGC
CAGGCAGGCATACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTCTACGGCCCCGACGGCAGCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCCTCATGGACCGCGCCGGCAACGCCCTCATC
AGGTTCAGGCGCAAGGGCTTCGGCATGTTCAGGAGATGGGAGGTCTGCCGGTA---------------TGAGG-------
--------AGGG---GGAGGAGGCGACGGCGTGGTTCAGCGTTCGGCGGGCCAAGAAGGGCGGGGCCGCCGTGGCGATGC
ACGGCGGCGCAGCGACCTGCTACAGGATCGACGGGGGCT---GTGC------GCGCAAGCCTGAGTACAGAGTGAGCGGT
GTAGATGGCTCGGTCGTGGCGGAGGTGGCGCGGAAGCAGACGGCGGCGGGGGTGGTGCTGGGGGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAAATGGATCAGCTGCTCGCCCTGGGCTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGAG
TTGTGAC-----------------------CCTCTTCTTCTAGTTCAGGTTCAGGTCTC----TGTAG-----------G
AAGCAAC-------G-----TTTTT-TTCTGACGAACAATTCATCAAGTTTTTTCCCATGCCGATTGGCATGGTGACTCT
TTTT-GGTGTATGACTT-------TTC--CCCCTTTCTCAAAGGGTTTTTCACGACCATAGTTTCAACACAATGAAACAA
GGTTACACGGTGATTGTATAAATCTTTGGATGTGTTCGGTTTCCAGGTTGTCTATGTGTTATCCTCAGTTTGTGGGAGTA
CTTAGTTTAGTTGTACAATGAAACACAAATGTTAGCCTATGAGACTCCAATTTAAGACTTTATGATCCCACACAGAATAA
ATTGAGAGGCATCAAAAATGTTTCTACA-------------------TCGGCCTCTTGGAGAAGAGGCTGATACACACAA
AAACGTTAGCCAGTCACTACTCACTGGCATACACAGCAAGCAGCAGTTATCGCACTGAGAATGGCTAGCACGAAGAAGAA
AGTTGAGTTGGGCACACCACAACTTCAACGCAA-----------------------------------------------
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---------------------------------AGAAGAAAGAAAGAGCGCGCGTCAACATCAGCCTACCAAAACGACGT
CTGTGCCACTGCCAGCCTTATTAAACTCAGTCAATTTATCGAGGAAACCGGAGTACAAAGTGTGTACAACAAGCGGAAGA
CCAGTACGCATAGGCGGCGACGGAGATAGCTGCCGGCTTGAAAAAGAGCAGGCGAGCAGCAGACCGTCTCTCTCCCTCCC
TCCCAAAAGGTTGCAATAATTCACGGGGCTGAGATGTACAATACGTGACAAGTGGTGGCCAATATGAACTTGAGCCTATA
ACCGGAGAAAAA-GAAAAAATTGAGCCCATTTGCCCTTGGCGGTGCCTGGCCACATGATGAGCAACATCACACTCGGCTG
TCAGTGGACCTGAAATACAACTCCACGTCTAGTT-TGACCTTCTCAAACCACCAATCTGGCTCGTCCTTTTCATCAAGA-
--TTTTTGCTGATATTTTTTAACAATAAAAAAAGACCTGGTTGA
>chr3D_8
-------GATCTC-------------------------------------------------------------------
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------------------------------------------------CCGTTGCGACGATATAGTTTACGCTGCATTGT
TAGCAGGGTTGTACTCCTAGTTGCTGGTCTGCACAAACTTCCCTCCCAA-------CCTCCCAGTTTTGTGGTAGCCCTT
GCTTTGTTTAACACA----------------------------------GCAGCATTGTCCTTGTGAGTTC-------GA
AGCTACTCCCTCTGTAAAGAAATATAAGAGCGTTTAGATCACTATTGTAGTGATCTTAGTGCTCTTATATTTCTTTACGG
AGGGAGTAATTAATTAGTGGTAGTAGTTGATCTCTCAGTCTTATGCTCGGAGTCAGAGCCTTGCATATCCATTTTTTGTC
AGAGCTGGAGCGGGATTTCAC--TAATCCAGCAAGAGCATGAATAAAATC-AAAATCACAGCTTCTTATTCCTATGCAGT
TCTGCTTTCCGC--AA------AAAAAGAAGAAAAATATCTTATGCAGTTCTGCAATGTGCGTATATAGAGTGAAGTTGT
TGTAAACAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGTCATGAACACTTAAT-------------------------------------------------------
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--------GGATAACGAGAGAAACCCGAACTGGCCCGACTGCT---TAATTAATTGATTAGGTGCAAGTACTTATCCTTC
CTTG----AGCAAAC-------------------------------GTACATGGCTACATGCGTGCTTTCTTTCTACTCG
CCA-----------------------------------------------------------------------------
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-----AACAGAAC--AATCTATTTTCTGACATAGTTGGG----------TCGAACTAGTACGTTTCGATCATCCATTTTT
AAACTGGGTCT----------------------------------------------------------------CACAC
ACACACACATGTTCAGCATTGCATTACATTGTGGTTTTAATTATATATCCATGTTTCAACTCTTGGATGAATCACCAAAC
GTGGTGCGACAAACGCATGCTGATTCGTACTACAGTACTAGTAGATGACTAGATGGAGCATAAACAACTAATCGGGTGCG
GCACTCAACGTT---------------------------------------------------------------TAGTC
TACCTCAGAGCACATCCTGAATAAATAGGCCA----------------------------------AACAGCAGCAGCAG
AGCA-----G-----AGCCGAGCCGAGCAGAGCAGAGCAATATTCTTCTTCTTCTTCTTCAT-----------TCTCTCT
TCAATGGCCAAGATCCAGCCCCTGCCTGCGCCCCCCTCGC---CGTCGTCCTCCGATGATCACCGCCA---------GGG
CCAGCAGGCGTACACGGTATGGATGAAGTCGCTGGTCTTCAACGGCAACGGCTGCGCGGTGTACGACAGCGACGGCGCCG
TCACCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCCTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGACGCAAGGGCTTCGGCATGTTCAGGAGGTGGGACGTCTGCCGGTG---------------C---G-------
--------AAGA---CGAGGAGGCGACGCCGTGGTTCACCGTGCGGCGGGCCGAGAAGGGCGGGGCCGCCGTGGTGATGC
ACGGCGGCGCAGCCACCTGCTACAGGATCGACAGGTGCT---GCGC------ACGCAAGCCCGACTACAAAGTGAGCGGC
GTGGACGGCGCGGCCGTGGCGGACGTCGCGCGGAAGCAGACGGCGGCCGGAGTGGTGCTCGGGGAGGACGTGCTGACGCT
GACGGTGGCGGCCGAGGCGGATCACCTGCTCGTCCTGGGCTTGGTCGTGGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
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>chr3A_8
AGCCT---------------------------------------------------------------------------
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------------------------------------------------------------------AGCAGAGCAATCTT
CTTCTTCTTCGATCTCTCGCG----ATGGCCAAGATCCAGCCCCTCCCCGCGGCCCCCTCACCGCCGTCCTCCGGTGATC
ACCGCCGGGGCCAGCAG---------GCGTACACGGTGTGGATGAAGTCGCTGGTCTTCAATGGCAACGGCTGCGCGGTG
TACGGCCCCGATGGCAGCGTTGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCTTCTTCATGGACCG
CGGCGGCAACGCCCTCATCAGGATCAGACGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTGCCGGTATGAGCAGG
GGGAGGAGGCGACACCGTGGTTCACCGTGCGGCGGGCCAAGAAGGGCGAGGCCGCCGTTGCGATGCACGGCGGCGCGAGA
ACCTGCTACAGGATGGACGGGTGCCCTGCCCGCAAGACGGAGTACAAAGTCCGCGGCGTCGATGGCGCGGCCGTGGCGGA
GGTGGCCCCGAAGCAGACGGCGGCGGGGGTGGTGCTGGGCGAGGACGTGCTGACGCTGACGGTGGCGCCGGAAATGGATC
ACCTGCTCGCCCTGGGTATGGTCGTGGTGCGTGGCCTCATCAACCGCTCCTTGTGACCCTCTTCTTCTAGTTCAGGTTCA
GGTCTCTCTAGTTAGTAGCAACGTAGACCAT-------------------------------------------------
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--------------------------------------------------------------------------TTTTTT
CTGACGAACAGTTCAGCAAGTTTTTTCCCATGATGCCAGATTGGCATGGTGACTCTTTTTGGCGTATGACTTTTTTTCCC
TTTCTCAAAGGGTTTTTCACTACCATAGTTTCAACACGATGAAACAAGGTTATACAGTGATTGTATAAATCTTTGGGAGT
ACTTAGTTTAGTTTGTGGGAGTACTTAGTTTAGTTGTCTATGTGTTATCCTTAGTTTGTGGGAGTACTTAGTTTAGTTGT
ACAATGAAACACAAATGTTAGCCTACGAAACTCCAATATAAGACTTTATGGTCTCAGACAGAATAAATTGAGAGGCACCA
AAAATGCCGGCCTCTTGGAGAAGAGGCTGACACACACACAAACATTAGCCAGTCACTCACTGGCAGTGGCACACGCAGAA
AGCAGCTGTCGCACTGAAAATGTCTCGCACGAAAAGAAAGTTCAATAGGGCACACCATAACTTCAACACAAAGAAGAAGA
AAAGAGCGCACATCAACATCAGCCTACCAAAACGACGTCCGTGCCACTGCCAGCCTTATTAAACTCAGCCAATTTATCGA
GGAAACCGGAGTACAAAGTGTGTACAACGAGCGAAAAACCAGTACGCAGAGACGGCGACAGAGATAGCTGCACGCTTGAA
AAA-AGCAGGCGAGCGTCAGACCGTCTATCTCCCTCCCTCTCAAAAGGTTGGAATAATTCACCGGCTCAGATGTACAATA
CGTGACAAGTGGTGGCCAATATGAACTTGAGCCTATAACCGGAGAAAAAGAGAAAAATGAGCCCAGTTGCCCATGGCGGT
GCCTGGCCACATGATATCGCTCACGCCATTTCCACTCAATTGGCGACAGCACACTCGTCTGCCAGTTGACCATCTCAAAC
TCTGACCTTCTCAAACCATCGATACGGCCCGTCCATTTCATCAAGATTTTTGCTGATATTCTTTTTTAACAAACAAAAAT
AGACCTGAGTGACTCTGCATCATCTTCATTTTGTAGCTGCTCACATTTTCCACAACAGACCTGAACAGTTGCATCCAGAA
TTTGTTAGGTTTCCCTCTATCAAAAAGGCTTGCTATACCCACCTCTCCTTCTTTCACATTTCATCTATTTAATAAAATGA
TTCACCATGGATATCTTATCTTGCACCATGATTTTTTTTTATTGTTACACTATATGAACAGCTGCAGACGTATCAACATC
AGCAGCCGGAGGAGCATGATTCATTCATTTCAGGTCTCAGCATGGCTCAAAGTTTACAATATGGTTCTCGCACACATCCT
TTCGTGCTTCGTCACTACCAGGAAACACGGGCGGTCAGACAGCTACCGAAAAGCTTAGGATATATTCACATAAAAGACAA
AAGTCTCCTCATATCACCATCTCCTGATCCCTCGCGAGCCGACTGAACACAATTGTCAAGCTAGCGGTCTCTGAAATAAA
CTGCTAATTCACTTGGACTCCAAGTCGCTGATGCCATAAACCACTACCTCCACCTCCAGTTCGCCTTATTCGTCGAGTGC
TGGCAACCGGAGAACAAAATTAACTGCACAAAATATAAACAAGAATGCTGCAAAAATTACACCATCATCTAACAAAGTAC
TCAAAGCTCAAATGTAGCAATAGCTGCTAGGAAGAAAATACTACAATTGGCCTGGGACTGAAAATAAATGGCCCGATCAC
AACTAACGAGCAAATTATAACTTCTTTTTAAAATTCCCAATGGAGAAAGGATCTCTTAGCCTTACAGTTTCTTTTCATAG
TTTGACATGCACAATTTTCCATCATACAAACTTACAAGTATGGTAACATCAGTAGACAACTAAACGGGCACAATTTAACA
TGTTGGACTCAATGGAAAGGACATTGGAAGCTCATAAGTGGAAGAAACATTAGTCTTGCTGGGTTGAGAAACTATATGGG
AGTTCTCATGAATCTCATAATCTTCCGTGCCGGGCTTTTCTTCTAAGCTGGTACAACCTGAAATGTTCACTTCAGGCTCT
AAAGCATAGACATTACTACATTGTTTATGAATACCCTCTTTGCTTCTAAGTGGAGTCTGCACTGCTGGATACCCTCTTTG
CTTGTATTTAGAATATATTTAGAGGGTCATCAAGAGCGTGAAATGTGCTAATAGCTGATTAAATTTCCAAGCAACTTGTA
TTTTGTCAAGAAAGGCTAAATTTCACAACCAACTAGTTTCACTTGAAGAATCCGTGGAACAAATTAACTACATTGGAAAG
ACAATGGTAGCACATTCCACTCTAAAATCATCTAGGTATTGAACAAATTGCAAATCCTTATGCTCGATTGCATGAACTAC
ACTTATTTATGTATGCTAGTTTTAGAGATAATTTTTCTTTCCGTCATCCTATCATAAGCATGTTCAGAAG-TACATATGT
TGTCAAGTATAATATTTGTACTCCCTCTGTCTGAAAATGTAACCCCGTTGTGCGCAGTTGTAACCAAAAGGCGGTCATTA
TATACTCTTATATAAAAGATTAGTTTGTAAAAATTGCATGATTAATTGTTTCCTCCAAAAATTACATGATAAATTGGAAT
GCAGGACACAGGGACTTCACCATGTTAGGTGTCTAGTGTAACAAATTGGATGGTTGTATTGTACCTAGCTCCGCCTATGT
TAGCACTATCACTAACTATTAAAACAATTACAAGCCTTAGTGCAATACACCGGT-AAATGTCTATGCTTGAAAATGACAT
GACTG-----------------------------TTGAATGGAGAACTTAAAATACTGTATTGACCAATAAGCTTGCCGC
CTCGCACATTAAAATGTGTCTACTT--------GTGTAAACAGCAACGTTACATGAAAGTCCAATGCTTTACAATCTCGC
TGGTCCCAAGGAAAATTTTCTCTGACTGGCACAAGCATCCACGTATACTAACACATGGGCAAAGAGGACGGAAATGAGTG
GGAACATGTGGCTCCAGGACTAACTTGGTCTGTATGGAAACTTTTGTGGCGAAAAGGACTTGAGTGAGGAAATTCAGTAC
TAACTTAGAAAAAGGGAAGCAGGAAAAGGAAGGCACTTGGACATCCACTCCGCTGACTCCCTTTGGCTCTCGAGCACCAC
ATATCTTACTGACTAAAAAAAACTTTTCCAAAAAGTTTATACACAATG--ACAAACCAAATTTTCAAAATATCCATATAT
GAGTTCAACTGTCAAATTTCCATATTCAAACTCAAACATGTATGACATGTGCAAAACTAACAACTCCGGCCCCGCTATTC
AAAATTTGAATCCGCCATTCTTTATCTATTTTGTAGGGAGGATCAAAATATTATTTGTACTAGGCGTCAAGAGTATGGTT
TAGATGAAGGTCCTTGACTAAAATGGGCCGCCCCTAAAATGTGTTCTCCCTTTTATCTTGCTTTAGTTTCCACGATGTGA
CGTGTAC-TCACACACGTGTGTGTATCTACTAAGCTCCCGGAGCCTTTCTTTCTAGCAGG--------------------
--------------------TATGTGCAATACCCGTTCTTAAACTGAGGCTTCCTCTCTGTCTGTTGTACTG----GCTA
GCTAGTTCAGCTGCTCCACACTTAGACAACTCGTATCATACCATGAACGCGCAAAGAAAGAAAGCACTGAGTTATCCATC
GTCCACACCTCGAGGCTCGATCAGTTTTACAA-------TATATGGTAGGTATCATGTGTACACACGGATTTTACGCGCT
CGGAAGAATAATATGGAGATCGCTACTGATTCCTCAGAAGTCGATCTCCCGTTGCGACGATATAGTTTACGCTGCATTAT
TAGCAGGGTTGTACTCCTAGCTGCTGGTCTGCACAAACTTCCCTCCCAAGTCCCAACCTTCCAGTTTTATGGTAGGCCTA
GCTTTGTTTAACACA----------------------------------GCAGCATTGTCCTTGTGAGTTC-------GA
AGCTAATTAATTT-------------------------------------------------------------------
-------------------GTGGTAGCTGATCTCTCAGTTTTATATACTCGGAGTCTCA---GCATATCCATTTTCTGTC
GGAGTTGGAGGCAGGTTTCCTAATAATCCAGCAAGAGCATGAGTAAACTC-AATATCACAGCTTCTTATCA---------
----------------------------------------TTATGCAGTTCTGCAGTGTGCGTATATAAAGTGATGTTTC
TGTAAACAAAACAAGGTTGAGGGCCTGACATGAGACAAGGGGGG-ACACAAAAACTTAAGTTTGTCGCCCCACG------
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---------GTCCTGAACACTTCATGGAAAACAAGAGACAACGGAACTGGCCTGTCTGGTTGAAAATGACACTGACTGTT
TTCCCTCAGAGAAAAAAATGGCATGACTGTTGCATGAAGAACTTAAATACTTCATTGAGGCCTGCTTCCTTGCACATTAA
AAATTGTGTACTCGTGTAAACAACAACGTTACATGAAAGTCCAATACTTTGCAATCTGAATGGTCCCATGGAAAATTTCC
TTTGACTAGTACTAGCATCCACATATATTAACACATGTGCAAAGAGGACGGAACTGAGTGCCAACATGTGGCTCCAGGCC
CAACTTGATCTATATGAAAACACTTTCGTGGTGAATAGGAGCTTGGGGGGTCACAGTTGAGCGGGGAAATTCAGCACTGA
AAAGGGAAAAAAGAAAAGGAAGGCACTTCCACCAGGAAAGTTGTGACCCCTGAGGGGCGACAATTGTTATCAAAAGTGGT
TGATTTGATTGACCCTGTCTCCAGTAAATGGGATGAGGCCCTGATTAGACAAACTATGTGGCCCATTGACGCACAACGGA
TTCTTTCAATCCCACTTCGCAACATGATATGGCAGATTTCATTGCCTGGAGTAATACAAAAAATGGGTTGTTTCCGGTAT
GGTCTGCTTATTATGTGGAGTGAAATTATCAGTATGGAAGTAAACTAACATATTCTATCAGGATGGGACGAACTACCACT
ACCCCTGTATGGTGTAAGATATGGAAGTTAGCTTGTCCGGCAAAAGTCAAAAAATTTATATGGCGTACTTTACATGGCAC
CCACCCATGTCGAGTAACACTTGCTAATAGACACATGAAGGTCTCGCCCATATGCCCTACTTTCCCTCAGGGTCTAGAAG
ATACGAAACACATGTTGTTCCTATGTAGTAAAGCAAGTGAGGTTTGGAAGAGGCTTGGGATGGACGAGAATATTAACAAA
GCCTGCAAGGTTTATCGTGCTGGAGAGGCGATATTGGAATATCTTTTACTTCTCCCAGATCAAGATTTGAGTATTATGGG
TTTCCAAAATGTACGAGAAATGATAGCTATATTAGCTTGGTATCTATGGTGGGAAAGACAAAAATTGGTGCATAAGAAAT
TAACTCAGAATGTAACTCAGATATCAATGGGGATCATGGCCCTTACATCAAATTTTGTGAATGCTTCATCTCCAAGAGCG
TCCATAAGAAAGGGGGGTTGGTACTGCCCTCCTAGGGGCTTCGTGAAACTAAATGTTGACGCGTCTTTTGATCATGACAT
GCTGACGGGGACGATGGGAGCAGTCTTGAGAGACGACAAAGGTAGGTTTATTGCGGGAGGAAATGAAAAGATCAAATATT
GTACCTATGTTCTGATGGCAGAAGCTTTAGTCCTGAAATTTGGCTTAACTTTGGCACAAAGAGCGGGATGTAACCGCATA
ATCATCAACTCAGACAATATGGAGGTGATTGAGACCATGTAGGACGGAGCACAATCAGCGGGTGCGGCGGCGGCAATCTT
TGATGACTGTTTTCACTATGCATGTGATTTTGTTGTGACTAGATTCGAACATTGTAATAGAGAGACAAACAAAGTAGCTC
ATGAACTTGCTAGATTAGCTAGATTTTCTGTGACTTTGGAATGGTTTGAGGAGCCTATCAATGAAATTGTAATGATCCTC
AGAAACGATGTACTGATTATTCCAAATAAATAAAGTCTAATTTTAACTCAAAAAAAGGAAAGGAAGGCACTTGGACATCC
GCTGACACCCTTTGACTCTCGAGCACCACGTATCCTAGTGTCAAGAAAAAATCTTTTCCAAAAAATGTTTATATGAAAAC
AGACCAATTCTTCAAAGTATCCACATATGAGTTGAACCATTAAATTTTGATATCCAAATTCAAACATGCATGACATATGC
AAAACTAACAATATGTGCAATCCTTTCTTTGTGGATAATACTGTATGTGCAATCCCAGATCTTAAACTGAGGCTACACGG
AGCCTTGCTCTCTGCCAGCCAGCTAGTTCAGCTGCTCCACACGTAGACAACACGTAGCACGCCACATAAACGCACAAAGA
AAGAAAGAAATGACTTCTCCATCGTCCACACCTGGAGGCTCGGTCAGTTTTGCAAAATACAGTAGGTAGCATCTATGTGT
ACGCACGGTTTTTGCATGCTAAGAATAACGATATGGGGATCGCTACTAACTCTTCAGGAGTCGATCTCCTGTCGCACGAT
ATATATAGTTATTACGCATCATTATTGGCAGAGTCGTTGTTGCTGATCTCCATAAGTCCTAAGGGTCAGACGATTTTAAG
GGATCTGTTCGGGCCTGTTTTTTGATTGAAACTGTAAAAAATAGTTATTCTACGGGCAAATTTTAGCATGGTCCCTCTTA
CCTCCTCTTTTTACATGTGAGGTAAGAAGGTAAGAGTTAATCAGGCCATGTTAAAACTGCTCTATTCTACGAGTTTGATC
ATCTATGCGGAGTCTGCTAGAGATGCTCTAAGCCTCCTTCCCAACCTCCCAGTTTTATGGTAGGCCTTGCTTTGTTTAAA
ACTGCAGCCAGCATTGCCCTTGTGGTAGCTCATCTCTCAGTTTTATATATACTCGGAATTGTTCATTTTCTGTCATTGAT
CCAAGCAGCCGTTTGTGCAAGCAGCTTTTTTTTAGTCACTCGCAAAAAAAAATGTACGGATATAACCAAAACCACAGCTT
CTTATTCTTATGCAGTTGTGCCATGTGTGGATTTAAAGTGGTGCTGTAAACAAAGTTGAGGGTCGATCGCTGGCCTGACA
TGAGACAAGGAAAACGAGAGAAAAGTGAACTGGCCCGACTGCATAATAATTGATTAATTAGGTGGAAGTACCTATCCTTC
CATG----AGCAAAC-------------------------------GTACATGGCTACATGCATGCTTTCTTTCTACTCC
CTCCGTTCCTAAATACTTGTCTTTCTAGGCATTTCAACAAGTGACTACATACGAAGCAAAATGAGTGAATCTACACTCTA
AAATATGTTTACATACATCCGTATGTAGTAGTCATGTGAAATGTCTAGAAAAACAAATATTTAGGAACGGAGGGAGTACT
CGGCAAACAGAAC--AATCTATTTTCTGACATATATGGG----------TCCAAATAGTACCTTTCGGTCATCCATTTTT
AAACTTGATCT----------------------------------------------------------------CACAC
ACACACACATGTTCAGCATTGCATTACATTGTGGTTTAAT---TATATCCATGTTTCAACTATTGGATGAATCACTAATG
GTGTTGCT--AATCGCATGCTCACTCGTACTACAGTACTAGTAGATGA--------------------------------
--------------------------------------------------------------------------GTAGTC
TACTTCAGAGCACATCCTGAATAAATAGGCCA----------------------------------AACAGCAGCAGCAG
AGCA-----G-----AGCCGAGCCGAGCAGAGCAA-----------TCTTCTTCTTCTTCGT-----------TCTCTCT
TCAATGGCCAAGATCCAGCCCCTCCCTGCG--------------GCCGTCCTCCGATGATCACTGGCAGGGCCAGCGGGG
CAAGCAGGCGTACACGGTGTGGATGAAGTCGTTGGTCTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGATGGCAGCG
TTGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCTTCTTCATGGACCGCGGCGGCAACGCCCTCATC
AGGATCAGACGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTGCCGGTA---------------TGAGC-------
--------AG---GGGGAGGAGGCGACACCGTGGTTCACCGTGCGGCGGGCCAAGAAGGGCGAGGCCGCCGTTGCGATGC
ACGGCGGCGCGAGGACCTGCTACAGGATGGACGGGTGCC---CTGC------CCGCAAGACGGAGTACAAAGTCCGCGGC
GTCGATGGCGCGGCCGTGGCGGAGGTGGCCCCGAAGCAGACGGCGGCGGGGGTGGTGCTGGGCGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAAATGGATCACCTGCTCGCCCTGGGTATGGTCGTGGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
------C-----------------------CCTCTTCTTCTAGTTCAGGTTCAGGTCTC----TGAGAGTAGGAACGCTG
TAGGTGGTTCATGTGACCA--TTTT-TTCTGACGAACAATTCAG-AAGTTTTTGCCCAGAATGAGGA-CATGATTGCTCT
TTTT-GGTGTATG--CTCGACTACTTTTTTCCCTTTCTCAAAGGTTATTTCACGACCATAGTTTCAACAC----------
---------------------ATCTTTGGATGTGTTCGATTTCCAGGTTATCCGTGTGTTATCCTCAGTTTGTGGGAGTT
CTTAGTTTAGTTGTACAATGAAACACAAATGTTAGCATATGAAACTCCAATGTAAGACTTTATGATCCCACACGGAATAA
ATGGAGAGGCATAAAAAATGTTTCTAGAATACAGAATAAATTAGTCGTCGGCCTCTTGGAGAAGAGGCTAACACACACAA
AAACGTTAGCCAGTCACTGTTCACTGGCAGACGCAACAAGCAGCTAT---CGCACTGAAAATGCCTTTCACA-AAAAGAA
AGTTCAATAGGGCACACCACAACTTCAACGCAAAAAGCAGATTAAGGCATAGCCTAGTGGTGGGAAGGGGTTGATGCCTT
CCCACCCACCCAGGTTCAAGGCATGGTACTTGCAATTTGGGGTTGTTGCACCAATATACCGTAGGGGGTTCCCTTACAGT
CTTTTTATTAAAAAAAAAACTTCAACGCAAAAGAGAAAAAA---AGAGCGCACATCAACATCAGCCTACCAAAACCATGT
TCGTGCCACTGCCAGCCTTACTAAACTCAGTCATTTTTTCAAGGAAACCGGAGTACAAAGTGTGTACAATGAGCGGAAGA
CCACTACGCAGAGACGGCGACGAAGATAGCTGTCGGCTTGAAAAAGAGCAGGCGAGCAGCAGCCCGTCTCTCTCCCTCCC
TCCCAAAAGGTTGCAATAATTTAC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3B_9
GGCCTGACATCAGACAAGGGGACACGACAACTCAAGTTTGTCGCCCCACAGTCATGGAAAACGAGAGAAAACCGAACTGG
CCCGACTGCTTAATTGATTAATTAGGTGCAGATACTTATCATTCCTTTGACCAAGCGTACATGGCTACATGCCTTCTTTC
TTTCTGCTCGCCAAACAGAACAATCTATTTTCTGACATATATAGGTCCAAATAGTACGTTTCGATCATCCAGTTTTTTAA
CTTTTAAAATGCGATCTCACACATGTTCAGCATTGCATGACATTGTGGTTTAATTATATCCATGTTCAACTCTTGGATTA
ATCACTAATCGCGGTGCTAATCGCATGCTGACTGGGACTACAGTACATAATGTTTCAACTAATCCGGTATAAATAGGCCA
AACCAGCCAACCAGCCCAATAATTCTACACCTACGTACACTTACGGGCCTAAACCTTCCACTAATCCCTCCGGCCCCCTT
GATTTTAACTATGGGCCCCGCCCTCCTGATTTCCAACTAACAAATCATTAGATGCCACGATGATTTCGTAAGGAGTTTAC
GTAAAAAGATTACGTAAGTGTAGCAAACCTCAACCATCCCAATCATCCCACTAACTGTGCAACAGCAGCAGAGCAATCTT
CTTCTTCTTCTTCGTTCTCTCTTCAATGGCCAAGATCCAACCCCTTCCTACGGCCACCTCGTCGTCGTCCTCCTATGATC
ACCGCCAGGGCCAGCGGAGCAAGCAAGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACAGCTGCGCGGTG
TACGGCCCCGACGGCAACGTCGCCTTCCGGGTCGACAACTATGGCTGCAGGGGCGGCCGTGAGGTCTTCTTCATGGACCG
TGCCGGCAACGCCCTCATCAGGATCAGGCGCAAGGGCTTCGGCATGTTCAGGAGATGGGAGGTATGCCGGTGCGTGCACC
AGGAA---GCGACGCCGTTGTTCACCGTGCGGTGGGCCGAGAAGGGCGGGGCCGCAGTTGCGATGCACGGCAGCACGGGA
ACATGCTAAGGATCA-ACGGGTGCTCTGCCAGCAAGAGGGAGTACAAAGTACGCGGCGTTGATGGCGCGGCCGTGGCGGA
GGTGACCCGGAAGCAGACATCGACGGGGGTGGTGCTGGGGGAGGACGTGCTGACGCTGACGGTGGCGTCGGAAATGGATC
ACCTGCTCACCCTGGGCTTGGTCGTTGTGCGTGGCCTCATCAACCGCTCCTTGTGGCCTTCTTCTTCTAGTTCAGTTTCA
GGTCTCTGTAC---GTAGCAACGTAGATGATGAGAGTAGGAACAATGTTTTAAATAGCAGGCTATGACATATAGTGGCAA
CCCTTAAAAACAACTATAACTGGGCTATAGCGGCAAATTATACATGAAATCATTTAGCAGCAACATGCTAGAACAGCTAT
AGCAGAGCTATAGCGGGGCTATAGCTGGCTATTTGAAACTACGGTAGGAACGTTGTAGGTGGTTCGTGTGACCATTTTTT
TTTACGAACAATTCAGCAAGTTTTTGCCCATGCCA----ATTGACATGGTGACTCTTTTTGGTATATGACTTTTTTTCCC
TTTCTCAAAGGGTTTTCCACCACCAGTTGAA----------AAACAAGGTTATACAGTCATTGCATAAATCTTTGGATAT
GTGCTCGATTTCCAG-----------------GTTGTCGATGTGTTATCCTCAGTTTGTGGGTTTACTTAGTTTAGCTGT
ACGATGAAACACAAATGTTAGCATATGAAACTCCAATAAAAGACTTGATGGCCCCACACAGAATAAACCGAGAGTC----
-----GCCGGCCTCTTGGACA-----CTGACACACACAAAAACATTAGTCAGTCACTGCCCACTT---GCAGATGCAGCA
AGCAGCTGTCACATTGAAAATGTCTCGCATGAAAAGAAAGTTCAATCGGGCACACCACAAATTCAACGCAAAGAAGAAAA
GAAGAGCGCACATCAACATCAGCCTACCAAAACGATGTCAGTGCCACTGCCAGCCTTATTAAATTCAGTCAATTTATCGA
GGAAACCAGAGTACAAAGTGTGTACAATGAGTGGAAGACCATTACGCAGAGACGGTGATGGAGATAGCTGCCGGCTTGAA
AAAGAGCAGGCGAGCAGCAGACGGTCTCTCTCCCTCCCTCCCAAAAGGTTGGAATAATTCACCAGCTGAGATGTA---TA
CGTGACGAGTGGTGGACAATATGAACTTGAGCCTATAACATGAGAAAAAGAAAAACTGCAAATCCCC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------ATGCTCGATTGCATGAACTAC
ACTTATTTATGTATGCTACTTTTAAAGACAACTTTTCTTTCCTTCATCCTATCAGAGTGTTTAGAAGTTATTACATATGT
TGTCAAATCTAATATT-GTACTCCCTCTATCCCAGAATGTAGCCCCGTTGTGCGCAGTTGTAACCAAAAGGCGGGCATTA
TATACTCTTATACAAAAGATTAGTTTGTAAGAATTGCATGATTAATTGTTTCCTTC-AAAATTACATGATAAATTC-AAT
GCAGGACACATGGACTTCACCATGTTAGGTGTCTAGTGTAACAAATTCGATTGTTGTATTGTACCTAGCTCCGCCTATGT
TAGCACTATCACTAACTTTTGAAACAATTGCGAGCCTTGGTGCAATACACCGGTAAAATGTCAATGCTTGAAAATGACAT
GACTGCTTTCCTTCAGGGAAAAATGGCATGACTGTTGCATGGAGAACTTAAAATACTTTATTGAGCAATATTCTTGCTGC
CTCACACATTAAAAAGTGTTTACTCGTCAACTCGTGTAAACAACAACATTACATGAAAGTCCAATGCTTTACAATCTCGC
TGGTCCCAAGGAAAATTTTCTCTGACTAGCACTAGCATCCACATATACTAACACATGCGCAAAGAGGACGGAAGTGAGTG
GGAACATGTGGCTGCAGGCCCAACTTGGTCTGTATGGAAACTTTTGTGGCGAAAAGGACTTGAGTGAGGAAATTCAGCAC
TAACTAAGAAAAAGGGAAAAA-GAAATGGAAGGCACTTGGACATACGCTCCGCTGACTCCCTTTGGCTCTCGAGCACCAC
GTATCTTACTGACAATAAAAAAAATCATTTCCAAAAATGTATAAATGAAAACAAACCAACTGTTCAAAGTATCCATACAT
GAGTTCAACCATTAAATTTTCATATCCAAATTCAGACATGTATGACATGTGCAAAACTAACAACTCCGGCCCTGCTATTC
AAAATTTGAATCCGCCATTATTTATCTATTTTGCAGGGAGAATCAAAATGTTATTTGTACTAGGGGTCAAGAGAACGGTT
TAGATGAAGGTCCTTGACTACAATGGGCCGCCCCTAAAATGTGTTCTCCCTTTTATCTTGTTTTAATTTCCACGATGTGA
CGTGGACATCACACACGTGTGTGTATCTACTAAGCTCCCGGAGCCTTTCTTTCTAGTGTCAAAAAACGTTCTTATATTTT
GGGACAGAGGGAGTAGAAAATATGTGCAATACCCGTTCTTAAACTGAGGCTTCCTCTCTGCCTGTCGTACTGGCTAGCTA
GCTAGTTGAGCTGCTCCACACGTAGACAACTCGTACCATACCATAAACGCGCAAAGAAAGAAAGAACTGAGTTATCCATC
GTCCACACGTCGAGGCTCGATCAGTTTTACGTACAATATTATATGGTAGGTATCATGTGTACACATGGATTTTGCGCTCT
CGAAAGGATAATATGGAGATCACTACTGATTCCTCAGAAGTC-ATCTCCCGTTGCGACGATATAGTTTACGCTGCAATAT
TAGCAGAGTTGTACTCCTAGTAGCTGGTCTGAACAAACTTCCC-------TCCCAACCTCCCAGTTTTATGCTAGGTCTT
GCTTTGTTTTACACA----------------------------------GCAGCATTGTCCTTGTGAGTTGTGAGTTGGA
AGCTAATTAATCAG------------------------------------------------------------------
-------------------------------------------------------------------TCGATCTTCTGTC
AGAGCTGGAGGCGGATTTCAT--TAATCCAGCAAGAGCATGAGTAAAATC-AAAATCACAGCTTCTTATTCTCATGCAGT
TATGCTTTCTGC--AACCAAAAAAAAGAATTAAAAAAATCTTATTCAGTTCTGCAATGTGCGTATATAAAGTAATAATGT
TGTAAACAAAACAAAGTTGAGGGCCTGACATGACACAAGGG-GGGACACAATGACTCAAGTTTGTCGCCCCACG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTCATGAACACTTCAC-------------------------------------------------------
--------------------------------------------------------------------------------
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--------GGAAAACGAGAGAAAACCGAACTGGCCCGACTGCT---TAATTAATTGATTAGGCGCAAGTACTTATCCTTT
CTTCAGGCAGCTAAC-------------------------------GTACATGGCTACATGTCTGCTTTCTTTCTACTCG
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AAGCAGAACAAATCTATTTTCTGACAAG---GGG----------TCGACATAGTACGTCTCGATCATCCATTTTT
AAACTTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAC
ACACACACATGTTCAGCATTGCATTACATCTAGG-TTTAATTATATATCCATGTCTCAACTCTTGGATGAATCACTAATC
GTGGTGCT--AATCGCATGCTGACTGG-------------------GAGTAGATGGAGCATAAACAACTAATCGAGTGCA
GCACTATTCTATCCCAACGTGTGACGCTC---ACAGTGCCATAAACTAATCAAGACACGGGAATAACGAACGAAGTAGTC
CACTTCAGAGCACGTCCTGAATAAATAGGCCA----------------------------------AACAGCAGCAGCAG
AGCCGAGCCG-----AGCCGAGCAGAGCAGAGCAA-----------TCTTCTTCTTCCATCTCTCCTCTCTCCTCTCTCC
TCAATGGCCAAGATCCAGCCCCTTCCTTCGTCTTCCTGCTCCACCTCTTCCTCCGGAGATCACCACCA---------GAA
CCGTCAAGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCTTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGGCGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTCCCGGTGCGCCCACAACGGCCAC---G-------
--------AGGA---CGAGGAAGCGACGCCGTGGTTCAGCGTGCGACGGGCCGAGAAGGGCGGAGCCGCCGTGACGATGC
ACGGCGGCGCGAGGACGTGCTACAGGATCGCCGGGTGCTCCGGCGC------GCGCAAGCCCGAGTACACAGTCCGCGGC
GTCGATGGCGCGGCCGTGGCAGAGGTGGCGCGGAAGCAGACGGCGGCGGGGGTGGTGCTAGGGGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAGGTGGATCAGCTGCTCGTCCTGGGCTTGGTCGTAGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3A_249
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGCATATCCATTTGCGGTC
AGAGCTCGAGCCCGATTTCAC--TAATCCAGCAAGAGCATGAGTAAAATC-AAAATCACAGCTTCTTATTCTTATGCAGT
TATGCTTTCCGTG---------AAAAAAATTAACAAAATCTTATGCAGTTCTGCAGTGTGCATACATAGAGTGATGTTGT
TGTAAACAAAACAAAGTTGAGGGCCTGACATGAGACAAGGGAGGGACACAGCGACTCAAGACTGTCGCCCCACG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTCATGAACACTTGAT-------------------------------------------------------
--------------------------------------------------------------------------------
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--------GGAAAACGAGAGAAAACCGAACTGGCCCGACCGCT---TAATTAATTGATTAGGTGCAAGTACTTATCCTTC
CTTG----ATCAAATGTACATGGCTACATATGCTCAAAAAAAAAATGTACATGGCTACATGCCTGCTTTCTTTCTGCTCG
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AACACAAC--AATCTATTTTCTGACATATAGTACGTTTCGATCATCCAAATAGTACGTTTCGATCATCCATTTTT
AAACTTGATCTC--------------------------------------------------------------ACACAC
ACACACACATGTTCAGCATTGCATTGCATTGTGGT-TTAATTATATATCCATGTTTCAACTCCTGGGTGAATCACTAAAC
--------------------------------------------ATGAGTAGATGGAGCATAAACAACTTTGGT-GC---
------------------------CGCTCACAACACTGCCATTAACTACCAGACAC---GGAATAACGAACGAAGCAGTC
TACTTCAGAGCACATCCTGAATAAATAGGCCA----------------------------------AACAGCAGCAGCAG
AGCA-----G-----AGCCGAGCCGAGCAGAGCAA-----------TCTTCTTCTTCTTCGT-----------TCTCTCT
TCAATGGCCAAGATCCAGCCC-TCCCTGCGGCCACCTCGC---CGTCGTCCTCCGATGATCAGCGGCA---------GGG
CCAGCAGGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCAG
TCACCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCCTCATGGACCGCGCCGGCAACGCCCTCATC
ACGATCAGGCGCAAGGGCTTCGGCATGTTCAAGAGGTGGGAGGTCCGCCGGTG---------------C---GCCCACAA
CGGCCACCAGGA---CGAGGAAGCGACGCCGTGGTTCAGCGTGCGGCGGGCCGAGAAGGGCGGGGCCGCCGTGGCGATGC
ACGGCGGCGCGAGGACGTGCTACAGGATCGACGGGTGCTCCGGCGC------GCGCAAGCCCGAGTACAGAGTCCGCGGC
GTGGATGGCTCGGTCATGGCGGAGGTGGCGCGGAAGCAGACGTCGGCCGGGGTGGTGCTGGGGGAGGACGTGCTGACGCT
TACGGTGGCGCCGGAGGTGGATCACCTGCTCGCCCTGGGCTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGAA
TTGTGATGCATGGATGGATGAAATGACAATCCTCTTCTTCTGGTTCAAT--------TC----TCTAG-----------G
TAGGTGGTTCGTGCTACTA--TTTTCTTCAGACGAACAATTTAGGAAGCTTTTGCCCAAGCCGAGGA-CATGGTGACTCT
TTTT-GGTGTATG--CT-------TTTTGACCCTTTCTCAAAGGGTTTTTCAATACCATGGTTGTAACAGAGAGAAGCAA
AGTT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_778
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----------------------------------------------------------------------------AAAC
GTGATGCT--AATCGGGTGCTGACTAGGAGCGGTACAGCAG---T--ACTAGATGGAGCATAAACAACTTTGGT-GTGCG
GCACTATTCTATTCTTACGCGTGACGCAC---ACACTGCCATTAACAAAGTAGTTCAAGCATCT----------------
--------------------ATAAGTAGATGAAACCAACCACTGCACCCACCATCCAAATCATCGCAACAGCAGC-----
--------------------AGCCGGGCAGAGCAA-----------TCTTCTTCTTCGATCTCTCGTCAT-------TCA
TCAATGGCCAAGATCCAGCCCCTTCCTTCCTCTCCCTGCTCCA---CCTCTTCCTACGGAAACCAACA---------GAG
CTCGCAGGCTTACACGGTGTGGATGAAGTCGCTGGTCTTCAACGGCAACGGCTGCGCGGTGTACGGCCCAGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCTTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGGCGCAAAGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTCCCGCTG---------------C---GCCCACAA
CGGCGGCCAGGA---CGAGGAGGCAACGCCGTGGTTCAGAGTGCGCCGGGCCGAGAAGGGCGGGGCCGCCGTGGCGATGC
ACGGCGGCGCGGGGACGTGCTACACGATGGACGGATGCT---GCGC------GCGCAAGCCGGAGTACAGAATCCGCGAC
GTGGATGGCACGGTCGTGGCGGAGGTGGCGCGGAAGCAGACGACGGCGGGTGTGGTGCTCGGAGAGGACGTGCTGACGCT
GACGGTGGGGCCGGAGGTGGGCCACCTGCTCGTCTTGGGCTTGGTCGTTGTGCGTGGCCTCATGAACGGATCCATGTGA-
--------------------------------------------------------------------------------
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>chr3A_778
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----------------------------------------------------------------------------AAAC
CTGATGCT--AATCGGATGCTGACTAGGAGCAGTACATTAGTACT--ACTAGATGGAGCATAAACAACTTTGGT-GTGCG
GCACTATTATATCCTTACGCATGACGCAC---ACACTGCCATTAGCAAAGTAGTTCAAGCATCT----------------
--------------------ATAAATAGATGAAACCAACCACTGCAGCCACCATCCCAATCATCGCAACAGCAGCAGCAG
AGCA-----G-----AGCTA-----------------------------TCTTCTTCTTCCA-----------TCTCTCG
TCGATGGCCAAGATCCAGCCCCTTCCTTCCTCTCCCTGCTCCATCTCTTCCTCCGATGATCACCAGCA---------GGG
CAGACAGGCGTACACGCTCTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCAGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCTTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGGCGCAAAGGC---GGCATGTTCAGGAGGTGGGAGGTCTGCCGGTG---------------T---ACCCACGA
CGGAGGCGAG---GGGGACGAGGCGACTCCTTGGTTCAGCGTGCGCCGGGCCGAGAAGGGCGGGGCCGCAGTCACGATGC
ACGACGGCGCGGGGACGTGCTACACGATGGACGGATGCT------C------GCGCAAGCCGGAGTACAGAATCCGCGAC
GTCGATGGCATGGTCGTGGCCGAGGTGGCGCGGAAGCAGACGGCGGCGGGTGTGGTGCTCGGAGACGACGTGCTGACGCT
GACGGTGGGGCCGGAGGTGGGCCACCTGCTCGTCTTGGGCTTGGTCGCCGTGCGTGGTCTCATGAACGGATCCATGTGA-
--------------------------------------------------------------------------------
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>chr3B_955
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---------------AGCAGAGCCGAGCAGAGCAA-----------------TCTTCTTCGA-----------TCTCTCG
TCAATGGCCAAGATCCAGCCCCTTTCTTCGTCTCCTTGCTCCA---CTTCTTCCTCCGGAGTTCAACA---------GGG
CAGGCACGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCCTCTTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGGCGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTCCCGCTG---------------C---GCCCAAGA
CGGCGGCCAGGA---CAAGGAGGCGACTCCTTGGTTCAGCGTGCGCCGGGCCGAGAAGGGCGGGGCCGCCGTCGTGATGC
ACGGTGGCGCGGGGACGTGCTACACGATGGACGGATGCT------C------GCGCAAGCCGGAGTACAGAATCCGCGAC
GTGGATGGCACGGTCGTGGCGGAGGTGGCGCGGAAGCAGACGGCGGCGGGTGTGGTGCTCGGGGAGGACGTGCTGACGCT
GACGGTGGGAACGGAGGTGGGCCACCTGCTCGTCTTGGGTTTGGTCGTTGTGCGTGGCCTCATGAAC-------------
--------------------------------------------------------------------------------
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>chr3D_960
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--------------------AGCCGAGCAGAGCAA-----------TCTTCTTCTTCTTCGA-----------TCTCTCG
GCGATGGCCAAGATCCAGCCCCTCCCCGCGGCCCCATCGC---CGCCGTCCTCCGGTGATCACCGCCA---------GGG
CCAGCAGGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCTTCTTCATGGACCGTCAGGGGAACGCCCTCATC
AGGATCAGGCGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTGCCGGTG---------------C---G-------
--------AGGA---CGAGGATGCGACGCCGTGGTTCACCGTGCGCCGAGCTGGCAAGGGCGGGGCCGCCGTTGCGATGC
ACGGCGGCGCGGGGACATGCTACAAGATCGACGGGTGCT------CT---GCCAGCAAGACGGAGTACAAAGTCCGCGGC
GTGGACGGCGCGGCCGTGGCGGAGGTGGCGCGGAAGCAGACGGCGGCCGGGGTGGTGCTGGGAGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAAATGGATCACCTGCTCGTCCTGGGTTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
------C-----------------------CCTCTTCTTCTAGCTCAGGAACGCCGTAGATGGTGAGAGTAGGAACGCCG
TAGGTGGTTCATGTGACCATTTTTT-TCCTGACGAACAATTCAGGAAGTTTTTGCCCATGCCGATTGGCATGGTGATTCT
TTTT-GTTGTATGACTT-------TTTTTTCCCTTTCTGAAAGGGTTTTTCGCGACCATAGTTTCAACACAATGAAACAA
GGTTATACACCGATTGTATAAATCTTTGGATGTGTTCGATTTCCAGGTTGTCTATGAGTTATCCTCTGTTTGTGAGAGTA
GTTAGTTTAGTTGTACAATGAAACACAAATGTTAGCCTATGAAACTCCAATATATGAATCTATGATCCCACACAGAATAA
ATTGAGAGGCACCCAAAATGTTTCTAAAAATCTG----AATTAGTCCTCGGCCTCTTGGAGAAGAGGTTGGCGCACACAA
AAACGTTAGCCAGTCACTACTCATTGGCAGACGCAGCAAGCAGCTGT---CGCACTGAAGATGTCTCTGCGCGAAAAGAA
TGTTCAATAGGACACACCACAACTTCAACGCAA-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGAAGAAA---AGAGCACACATCAACATCAGCCTACCAAAATGACGT
CCGTGTCACTGCCAGCCTTATTAAACTCAGTCAATTTATCGAGGAAATCGGGGTACAAAGTGTGTACAACGAGCGGAAGA
CCAGTACACAGAGGCGGCGACGGAGATAGCTGTCGGCTTGAAAAAGAGCAAGCGAGCAGCAGACCGTCTCTCTCCCTCCC
TCCCAAAAGGTTGGAGTAATTCACC-GGCTGAGATGTAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3B_975
--------------------------------------------------------------------------------
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----------------------------------------------TCTTCTTCTTCTTCGA-----------TCTCCTG
TCGATGGCCAAGATCCAGCCCCTCCTCGCAGCCCCATCGC---CGCCGTCCTCCGGTGATCACCGCCAGGGCCAGCGGGG
CAGGCAGGCGTACACAGTGTGGATGAAGTCGCTGGTCTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGAGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTTCTTCTCATGGACCGCGCCGGCAACGCCCTCATC
AGGATCAGGCGCAAGGGCTTCGGGATGTTCAGGAGGTGGGAGGTCTGCCGGTA---------------T---G-------
--------AGGAAGGGGAGGAGGCGACGCCGTGGTTCACCGTGCGCCGGGCTGACAAGGGCGGGGCCACCGTGGCGATGC
ACGGCGGCGCGGGGACGTGCTACAGGATCAACGGGTGCT------CA---GCCCGCAAGACGGAGTACAAAGTCCACGGC
GTGGATGGCGCAGCCGTGGCGGAGGTGGCCCGGAAGCAGACGGGGGCGGGGGTGGTGCTGGGGGAGGACGTGCTGACGCT
GACGGTGGCGCCGGAAATGGATCACCTGCTCGCCCTGGGCTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
------C-----------------------CCTCGTCTTCTAGTTCAGGTTCAGGTCTC----TGTAG-----------G
TAGCAATGATGAGAG-----TTTTT-TCCTGACGAACAATTCAGCAAGTTTTTTCCCATGCCGATCGGCATGGTGACTCT
TTTTTGGTGTATGACCT-------TTTTTCCCCTTTCTCAAAGGGTTTTTCACGACCATAGTCTCAACACAATGAAACAA
GGTTATACAGTGATTGTATAAATCTTTGGGTGTGTTCGATTTCCAGGATGTCTATGTGTTATCCTCAGTTTGTGGGAGTA
CTTAGTTTAGTTGTACAATGAAACACAAATGTTAGCATATGAAACTCCAATATAAGACTTTATGGTCCCACGCAGAATAA
ATTGAGAGGCACCAAAAATGTTTCTAGAATACTG----AATTAGTAGTCGGCCTCTTGGAGAAGAGGCTGACACACACAA
AAACGTCAGCCAGTCACTACTCACTGGTAGACGCAGCAAGCAGTTGT---CACACTAAAAATGCTCACACG--AAAAAAA
AGTTCAATAGGGCACACCACAACTTCAACGCAA-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGGAGAAAAAAAGAG----CATCAACATCAGCCTACCAAAGCAACGT
CCGTGCCACTGCCAGCCTTGTTAAACTCAGTCAATTTATCGAGGAAATAGAAGTACAAAGTGTGTACAACGAGCGGAAGA
CAAATACACAGAGACGGCGATGGAGATAGCTACCGGCTTGAAAAGGAGCAAGCGAGCAGCAGACCGTCTCTCTTCCGCCC
TCCCAAAAGGTTGTAATAATTCACC-GGCTGAGATGTACAATACGTGACAAGTGGTGGCCAATATGAACTCGAGCCTATA
ACCGGAGAAAAAAGAAAAAATTGAGCCCATTTGGCCATGGCGGTGCCTGGCCATGCAATTGGCGACAGCACACTCGTCTG
CCAGTTGACCGGAAATGCAACTCCACGTCTAGTTCTGACCTTTTCAAACCACCAATCAGGCCCGTCTATTTCATCAAGTT
TTTTTTTTGAAATTTTTCTTAACAAAAGAAAAGACCT-------
>chr3D_991
TCTCTCTG------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
TCAATGGCCAAGATCCAGCCTCTCGCTGCCGCCGCCTCGC---TGTGTTCCTCCGATGATCACCGGAGGCAGCAGGGCAG
GCAGCTGGCGTACACGGTGTGGATGAAGTCGCTCGTGTTCAACGGCAACGGCTGCACGGTGTACGACCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCTTCTTCATGGACCGTCAGGGGAACGCACTCATC
AGGATCAGACGCAAGGGCTTCGGCATGTTCAGAAGGTGGGAGGTCTGTCGCTG---------------C---GCCCACAA
CGGCGGCCAGGA---AGAGGAGGCCACGCCGTGGTTCAGCGTGCGGCGGGCCGAGAAGGGCGGGGCCACCATGGCCATGC
ACGGCGGCGCCGGGACGTGCTACACGATCGACGGGTGCT------CT---GCCCGCAAGTCGGAGTACAGAGTACGTGGC
GTGGATGGCGCGGTGGTGGCGGAGGTCGCACGGAAGCAGACGGCGGCGGGGGTGGTGCTCGGGGAGGACGTGCTGACGCT
GAAGGTGGCGCCGGAGGTGGATCACCTGCTCTTCCTGGGTTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
--------------------------------------------------------------------------------
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--------------------------------------------
>chr3A_991
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-------------------------------------------------------------------------TCTCTCG
TCCATGGCCAAGATCCAGCCCCTTGCTGCCGCCGCCTCAC------CGTCGTCCTCCGGAGTTCAACA---------GGG
CAGGCAGGCGTACACGGTGTGGATGAAGTCGCTGGTCTTCAACGGCAACGGCTGCACGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGTCTTCTTCATGGACCGTGAGGGGAACTCCCTCATC
AGGATCAGGCGCAAGGGCTTCGGCATGTTCAGGAGGTGGGAGGTCTGTCGGTG---------------C---GCCCACAA
CGGCGGCCAGGA---GGAGGAGGCCACGCCGTGGTTCAGCGTGCGGCGGGCCGAGAAGGGCGGAGCCGCCGTGGCGATGC
ACGGCGGCACGGGGACGTGCTACACGATCGACGGGTGCT------CT---GCCCGCAAGTCGGAGTACAGGGTACGCGGC
GTGGATGGCGCGGTGGTGGCAGAGGTCGCACGGAAGCAGACGCCGGCGGGGGTGGTGCTGGGGGACGACGTGCTGACGCT
GACGGTGGCGCCGGAGGTGGATCACCTGCTCTTCCTGGGCTTGGTCGTCGTGCGTGGCCTCATCAACCGCTCCTTGTGA-
--------------------------------------------------------------------------------
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--------------------------------------------
>chr3A_1070
C-------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GGG
CAGGCAGGCGTACACGGTGTGGATGAAGTCGCTGGTGTTCAACGGCAACGGCTGCGCGGTGTACGGCCCCGACGGCGCCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCACGAGGCCCTCTTCATGGACCGTCAAGGGAACGCACTCATT
AGGATCAGACGCAAGGGCTTCTGGACGTTCAGGAGGTGGGAGGTCTGCCGTTG---------------C---ACCCACGA
CGGCAGCGAGGA---GGAGGAGGCGACGCCGTGGTTCAGCGTGCGTCGTGCTAAGAAGGGCGGGGCCGTCGTGGCGATGC
ACGGTGGCGCAAGGACGTGCTACAGGATGGACGGGTGCT------CCGGCGCGCGCAAGCCCGAGTACAGAGTCCGCGGC
GTGGATGGCTCGGTCGTGGCGGAGGTGGCGCGGAAGCAGACGTCGGCGGGGGTGGTGCTGGGGGAGGACGTGCTGACGCT
CACGGTGGCGCAGGAAATGGATCACCTGCTCGTCCTGGGCTTGGTCGTCGTGCGTGGTCTCATCAACCGCTCCTTGTGA-
--------------------------------------------------------------------------------
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>chr3B_1071
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-----------------------------------------------------------------------------GGG
CAGGCAGGCGTACACGGTGTGGATGAAGTCGCTGCTGTTCAACGGCAATGGTTGCGCGGTGTACGGCCCCGACGGCGTCG
TCGCCTTCCGCGTCGACAACTACGGCTGCAGGGGCGGCCGCGAGGCCCTCCTCATGGACCGTGAGGGGAACGCACTCATC
AGGATCAGACGCAAGGGCTTCGGGACGTTCACGAGGTGGGAGGTCTGCCGGTG---------------C---GCGCAGGA
CGGCGGC---GA---GGAGGAGGCGACGCCATGGTTCACCGTGCGGCGGGCTGAGAAGGGCGGGGCGGCCGTCGCGATGA
ACGGCGGCGCGGGGACGTGTTACAGGGTCGACGGAAGCT---GC------GCGCGCAAGCCGGCGTACAGAGTTCGCGGC
GTGGATGGCTCCGTTGTGGCGGAGGTGGTACGGAAGCAGACGGCGGCGGGGGTGGAGCTGGGGGAGGACGTGCTGACGCT
GACGGTGGCGCCCGAGGCGGATCACCTGCTCGTCTTGGGTTTGGTCGTCGTGCGTGGTCTCATCAACCGCTCCTTGTGA-
--------------------------------------------------------------------------------
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--------------------------------------------
>SNPs
-SSSS---------------------------------------------------------------------------
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------------------------------------S-------------------------S---------S-------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------------S---------
---------S----SSSSS-SSSSSSSSSS-SSSSSSSSS----------------------------------------
-----------------------------------------------S-SSSS-S---------------S---------
--------S-----------------------------S----------SS-----------------------S-----
-------S---SSS--------S-------S-S-----SS--S----S--------------------------------
-S--S---------------------------------------------------------------------------
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--------------------------------------S---------------S-------------------------
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-------------------------S------------------------------------------------------
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-------------S------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------S-------------------------------S-SSSSSS-----------------------
--------------------------------------------------------------------------------
----------SSSSS---S-------------------------------------------------------------
----------------------------------------------------------------S--------------S
---------S--------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---S-------------------------------S--------------------------------------------
-----------S----------------S-------------S-------------------------------------
-----------------------------------S-------------------------S-----------------S
--S-----------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
S-----S------------------------------------S------------------------------------
--------------------------S-----------------------------------------------------
-----S--S-----------------------------S-----------------------------------------
------------------------------------------S--------S----------------------------
--------------------------S--------------------------------------------S--------
-----------------------------S--S-----------S--SSS--------S----S---S---SS-S-----
----S-S-S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S---------S-S--------------------------
-S--------------------------------------------------------------------S---------
----------S---------------------------------------------------------------------
------------------------SS--------------------------------------------S---------
---------------------------------S--S----------------SSSS--SS--S---S--------S---
S----S----S-----S-------------------------S--------------S---S----SS----------S-
-------SSSS--S---S-------S-S----SSS-SSSSSSSS
>forward_5473
--------------------------------------------------------------------------------
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-------------GGTCCGGTTTCTAACTCGGT-----------------------------------------------
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>reverse_10930
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-------------------------------------------------TCGCACTGAGAATGGCTAGC-----------
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--------------------------------------------------------------------------------
--------------------------------------------
