>input_sequence_74849
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------------------------------------------------------------ATGGATGCCGGCGCCGGCCA
CGGCGCCTCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCGCGCCGTGGC
AGTCGTCG---TCCTCCTCGCACGCCCGCCGCGCGGGGACGACCACGACGGACGAGGAGTGGTGGCACCAGGTGGGGGAA
GGGGGCGCAGGGACGGGGGCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTGATGAAGGTGCGCGA
GTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACCACCGGCACGGGGGCG
GGGCCGGCGCCGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGCCACGGCGCC
AGCCCGGAGGGC---CCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGCCGGGCTCCGC
CAGGTCCTCCATGGACCTCGGCGGCCGCGACGCGCCCTCGCTGTTCCACCACCCGCTGCCGCAGCAGCCGCACACTCCCC
CCGCCGCCGC------GCGGGGCTGA------------------------------------------------------
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>chr7D_1_TraesCS7D01G192000
GCGTCGCCAGAGGAGGAGGCACCGGCGGTGGCGGTGTGAGATCTGGGGATCTCGAGGGGATGGCGGCGCAACGATCTCGA
GGGAATCGAGAGCGACGGCGACGCAGCTTACTCGAGGGGATCGAGAGCCGAGGGCGGCGGCGACGGGAGGGGATCGAGAG
TGGAGGGCAGGAGAGTCGTGCGTGCGATTGGTTTAGGTTTTTTTTTCGCTGGTTAATTTTCGTTGGTTAATTTTCGGAGG
TTTTTTTCCTTCGCTTGTAGATGGGTGCGACGTTAGGTGCGGCCCTGGACTGTGTGGGGGCATCGCGACGTGGTTTTTTT
ATTTGACGCGGCTAACAGTGAGGTGGGAGCAGGTATCAAAAAACCATGGTAGGTGGGACGAAAATAAATCCGGAACGGAG
ACTACCATACCAACTAAGACGTTAGAAGTAGAGATTGAATAAACTTTTTTTTAGAAAAAACTCTGCATGGGATGGGGGAT
GGGGGATGGC-GCGCCATCCAACGAATCATACCCCGAGCAAGAATAACCGCCCGTCCTGGCTTCTGCTCTGTATCCTCAC
TGTTCTCTGGACCCACCCCCACAACGTCTGG--CCACTGACAACCCTACCCGGCGGA--ACTGACCGCCACCCGTCACCG
TCCGTCAAGCAGCAACGACGTGACAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCGTCTCCACTGACACCT
GTGCCCCGAAACCACGGGCCCCACAGACTCCCGAGAGAGAAAGCCCCACCACCACGCTGGAGGTGGGCCCGGGGTCACGA
GGCGAAGGGATGGATGGATGGATGGCAGTTGGGCTCAC------CAGGCGCGAGGGGGCGCGCGCCGTCGCGGGCAAGTG
GAAACCGCCTCCCCGATAAAACCCTGGCGCCCCTCCCCGCTCTCGCCTCCGCCTCCGC---------TCCCCTCCGCCCC
GCGCACGCGTCACGCATCGCTCTTCAAGAAAGAGTTTCGGCCAACCGCCCCGAGATCCCCATGGATGCCGGCGCCGGCCA
CGGCGCCTCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCGCGCCGTGGC
AGTCGTCG---TCCTCCTCGCACGCCCGCCGCGCGGGGACGACCACGACGGACGAGGAGTGGTGGCACCAGGTGGGGGAA
GGGGGCGCAGGGACGGGGGCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTGATGAAGGTGCGCGA
GTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACCACCGGCACGGGGGCG
GGGCCGGCGCCGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGCCACGGCGCC
AGCCCGGAGGGC---CCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGCCGGGCTCCGC
CAGGTCCTCCATGGACCTCGGCGGCCGCGACGCGCCCTCGCTGTTCCACCACCCGCTGCCGCAGCAGCCGCACACTCCCC
CCGCCGCCGC------GCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTATAGTGGGGCGGCGGAGGCGATAAG
GCGGGACGTCCCTTTCTTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGGTGGTGGTGGTGGTGCTCCGG
CAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACAG---CAGTAGAACTCAATTTT---GTTGTAAT
AGTCACAGAATTTGTCCAGAAAGCTCCT-CTCGCTTGTATCTATGATCATCATCTCCCATCATCATGTTATGAAACATAT
ATTTGTAGATTCCTGTTATCATCAT------TAGTGCTGCAGTCGATGATATTACAAATTAACGTGGTATA-TTTTTTGC
ATGACACTTCCTACCTTTCATTCATTGCAAAGATATGGTTCGAATTTTAATAATTGCAAAGATATTGCACAGAGAAATAC
CACTAATA---TAGATAGTCCAGCAACTTTGGGTGGCGCCTCTGCTAGTTTTCATCATTCCAAAGATATTACAAGCAAGA
AATGGCAAG-----------TACTAATAGAGTCCAGCAACTTAATTAAGACCGCAAATCCGCCAGAGCATTGGATGCTCG
GAAGATTCGGGGGAGGTCACTCGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCACTCGCCACCCGTGAGATGATGAG
ATCAGATTTCGATGTTGCCGACACGGTTCGTGCAATCACATCTGCATAGATGGTTGCATCAATCTGGCACCTCATCATCA
AGAATCAAATACGAGTATG----CCGCTGCTCCGTTTTTTGTTTTCTGAAC------TGCATGCTGGGTCTGGACGGAGA
CCTCCGCTTGTCGTACTGGCGATTACCAAGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTGTCTGGTCCA
AAACTAGTTGACCCTGGGTTTACTCCTCGTCGTAGATCAACAATTGACACAAGGGTTCGCCAAAAAGAAAAGAAAAATGG
CAGTTGATGTACAATTCTTTCTTT
>chr7A_476
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---------------------------------------------------------------------------GGGAG
GGGGGATGGC-GCACCATCCAAGGAATCGTACCCCGAGCAAGAATGACCGCCCGTCCTGGCTTCTGCGCTGCATCCTCAC
TGTTCTCCGGGCCCACCCCCACAACGTCTGG--CCACTGACAACCCTGCCCCGCGGA--ACTGACCCCCGCCCGTCACCG
TCCGTCAAGCAGCAACGACGTGGCAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCATCTCCACTGACACCT
GTGCCCC-AAACCACGGGCCCCACGGAC------------------CACCACCACGCGGGCGGTGGGCCCGGGGTCACGA
GGCGAAGGGG--------TGGATGGCAGTTGGGCTCAGCAGGCGCGAGCGCGAGGGGGCGCGCGCCGTCGCGGGCAAGTG
GAAACCGCCTCCCCGATAAAACCCTGGCGCCCCTCCCCGCTCTCGCC------TCCGC---------TCCCCTCCGCCCC
GCGCACGCGCCACGCATCGCCCTCCAAGAAAGAGTTCCGGCCAACCGCCCCGAGATCCCCATGGACGGAGG---CGGCTA
CGGCGGCGCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCGCGCCGTGGC
AGTCGTCGTCCTCCTCCTCGCACGCCCGCCGCGCGGGGCCGACCACGACGGACGAGGAGTGGTGGCACCAGGTCGGGGAA
GGG---------ACGAGGGCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTGATGAAGGTGCGCGA
GTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACCACCGGCACGGGGCCG
GCGCCGGCGCCGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGCCACGGCGCC
ACCCCGGAGGGCGCCCCGGGCGGCGAGCTCCCGGGGTACCCCGACTTCTCCGCCCGCTTCGCCGCGCCGCCGGGCTCCGC
CAGGTCCTCCATGGACCTCGGCGGCCGCGACGCGCCCTCGCTGTTCCACCACCCGCTGCCGCAGCAGCCGCACACTCCCC
CCGCCGCCGCCGCCGCGCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTGTAGTGGGGCGGCGGAGGCGATAAG
GCGGGACGTCCCTTTCCTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGCTGCTGGTGGTGGTGCTCCGG
CAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACCATCACAGTAGACCTCAATTTT---GTCGTAAT
AGTCACAGAATTTGTCCAGAAAGCTCATCCTCGCCTGTATCTATGATCACCATCTCCCTTCATCATG-TATGAAACATAT
ATTTGTAGATTCCTGTTATCATCATCATCAGTAATGCTGCAGTCGATGATATTACAAATTAAGA-TTTCCTTTTTTGTGC
ATGACACTTCCTACCTTTCATTCATTGCAAAGATATGGTTCGAATTTTAATAAGTGCAAAGATATTGCACAAAGAAATGC
CACTAATATAGTAGATAGTCCAGCAACTTAGGGTGGCGCCTCTGCTAGCTTTCATCATTCCAAAGATATCACAAACAAGA
AATGGCAAGTACTA----ACTACTAATATTGTCCTGCAACTTAATTAAGACCGCAAATCTGGCAGTGCATTGGATGCTCG
GAAGATGCGGGGGAGGTAGCATGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCACTCGCCACCCGTGAGATGATGAG
ATCAGATTTTAATGTTGCCCACACGGTTCGTGCAATCACATCTGCATAGATGGTTGCATCAATCT-GCACCTCATCATCA
AGAATCAAATAGAGTAGTG----CCGCGGCTCAGCCTTCCGTTTTGTTAAAATCAAGTGCATGCTGGGTCTGGATGGCGA
CCTCCGCTTGTCG-ACTGGCGATTGCGAGGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTGTCTGGTCCA
AAGCTAGTTGACCCTGGGTTTACCCCTCGTCGTAGCTCAACAAGTTACAGAAGAATTCGCCAA----AAAGAAAA-----
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>chr7B_476
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---------------------------------------------------------------------------GGGAG
GGGGGAATGGGGCACCATCCAACGAATCATACCCCGAGCAAGAATAACCGCCCTTC----CTTCTGCTCTGTATCCTCAC
TGTTCTCCGGACCCACCCGCACAACGTCTGGCCCCACTGACAACCCCGCCCCGCGGGGTACTGATCCCCGCCCGTCACCG
TCCGTCAAGCAGCAACGACGTGACAAATAAACGGCCGCGCCTGCCAGCCGATGACAACCCACCCGTCTCCACTGACACCT
GTGCCCC-AAACCACGGGCCCCATGGACCT------------------CCACCACGCGGGAGGTGGGCCCGGGATCACGA
GGCGAAGGGCTGGACGGATGGATGGCAGTTGGGCTCACCATGCGCAGGCGCGAGGGGGCGCGCGCCGTCGCGGGCAAGTG
GAAACCGCCTCCCCGATAAAACCCTCGCGCCCCTCCCCGCTCTCGCC------TCCGCCTCCGTGAATCCCCCACGCCCT
GCGCACGCACAACGCATCGCTCTCCAGGAAAGACTTTCGGTTAACCGCCCCGAGATCCCCATGGACGCCGGCGCCGGCCA
CGGCGGCGCGCCCGACGACGCCGACGCGGCCTTCTTCTCGCGCCGCCGGTACCGCTGCTGCTGCTTCTCCGCGCCGTGGC
A------GTCGTCCTCCTCGCACGCCCGCCGCGCGGGGACGG---CGACGGACGAGGAGTGGTGGCACCAGGTGGGGGAA
GAG---GCGAGGGCGGGACCGGGCGCGGAGCGGCGGCGGTGGTGGCGGCGCGGGGTGGACGCGCTCATGAAGGTGCGCGA
GTGGTCGGAGCTGGTGGCCGGCCCGCGCTGGAAGACCTTCATCCGGCGGTTCCGCCGCGGGCACC---GGCACGGGGCCG
GCGCCGGCGCTGGCGGGGGGCGGAAGCTCAACTACGACGCGCTCAGCTACGCGCTCAACTTCGACGAGGGCCACGGCGCC
AGCCCGGAGGG---CCCCGGCGGCGAGTTCCCGGGGTACCCCGACTTCTCCACCCGCTTCGCCGCGCCGACGGGCTCCGC
CAGGTCCTCCATGGACCTCGGCAGCCGCGACGCGCCCTCGCTGTTCCATCACCCGCTGCCGCAGCAGCCGCACACTCCCC
CCGCCGCCG------CGCGGGGCTGACGGCGCCGGCCAACCGATTCTTTTCTGCTGTAGTGGGGCGGCGGAGGCGATAAG
GCGGGACGTCCCTTTCTTCCTGTTGGCCGCTGGTGGCGGTGGATGGTGTCCATAGGCTGGTG------GTGGTGCTCCTG
CAATTCTTTCATTTTCTTGTCTCGTTCGCCATTGTATAAAATCATACAG---CAGTAGAACTCAATTTTGTCGTCGTAAT
AGTCACAGAATTTGTCCAGAAAACTCCT-CTCGCTTGTGTCTATGATCATCATCTCCCATCATCATG-TATGAAACATAT
ATTTGTAGATTCCTGAT------ATCATCAGTAGTGCTGCAGTCGATGATATTACAAATTAAGATTTTCCTTTTTTGTGC
ATGACAATTCCTACCTTTCATTTATTACAAAGATATGGTTCGAATTTTAATAATTGCAAAGATATTGCCCAAAGAAATAC
CACTAATATA---GATAGCCCAGCAACTTAGGGTGGCGCCTCTGCGAGCTTTCATCATTCCAAAGATATCACAAACAAGA
AATGGCAAGTACTTAACTACTACTAATATAATCCAGCAACTTAATTAAGACCGCAAATCGGCTAGTGCATTGGATGCTCA
GAAAATGCGGGGGAGGG----CGCATTGCAACCGCGTGTCCCGTCGGTGTCAATTCAATAGCCACCCGTGAGATGATGAG
ATCAGATTTTA-TGTTTCCGACACGGTTCGTGCAATCACATCTGCATAGAT-------------TGGCACCTCATCATCA
AGAATCAAATAGAGTATGCCTGCCCGCTGCTCAGTTTTTTGTTTTGTGAAC------TGCACGCTGGGTCTGGACGGCGA
CCTCCGCTTGTCG-ACTGGCGATTGCCAAGCCTGTTCGTTCGGCAGCTGGGTTGCGTGCCGTGTTCCTCTGTCTGGTCCA
AAACTAGTTGACCCTGGGTTTACTCCTCGTCGTAGCTCAACAAGTGACAGAAGAATTAGCCAA----AAAGAAAAAAGAG
CAGTTGATATACGATCCTTTCTTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S
-------------S------------------------------------------------------------------
-------S---------------------------------------S---S--------------S--S----------
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-------S----------------S---SSSSSSSSSSSSSSSSSS-----------S----------------------
---------S----S-----------------------------------------------------------------
-----------------------------------------------SSSSSS---------------------------
---------S-------------S-----------------------------------------S--------------
-----S-S------------------------------------------------------------------------
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---SSS--SS----------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-S------------------------------------------------------------------------------
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-------------------------------------------------------S------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------S-----
-------------------------------------------------------------------S------------
--------------------------------------------------------------SS-SS-SSS-----S---
-----------------------------------------------------------------------S--------
-----------------------------S------------------S--------------------S----S-----
----------------------------S------------------------------S-----S--------------
------S----------SS-S-----------------------------------------------------------
---------SS---------------------------------------------------------------------
-----------SSSSSS---------------S------------S-------------------------------S--
-------------S----------S-------------------------------------------------------
-----------------------------------S-------S-----S---SS--------SSSS---SS-----SS-
--------S---S--S--------
>forward_122
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----------------------GCAGCTTACTCGAGGGGATC--------------------------------------
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>reverse_1997
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----------------------------------------------------------------------------TTGC
ATGACACTTCCTACCTT---------------------------------------------------------------
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