>input_sequence_74782
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-----------------------------------------------ATGGAAGGGGGCAGCCTCTGGCACGAGTACGAG
ACGGACCTCCGGGCCGCCGACGTGTGGGAGGTCTATGGCAGCCTCGCTCTCGGGCAACTAGCCCCCCAGCTGCTCCCGCA
CGTCCTCTCAAAGGTCGAGCTTGTAGAGGGAGACGGCGGCGTCGGCACAGTCCTGCTCGTCACTTTCCCTCCTGCAGGTC
CGAATCTCAAAAGCTCGGCTTCAGGATGGTACAGATGTAATCGCAGCTTCAATCAGTTTTTAGTTACCTGCATGTGCTGA
ATCATTTTGTTAGGAGCTTCCGAACCAAGAAGCCACAAGGAGAAGTTCAACGTAGTCGACCATGAGAAGTACATCAAGGA
GGCAGAGACGGTGGAGGGAGGCTTTCTGGATCTCGGCTTCCGGAAATATTTGGTGCGATTCAAGGTCGTAGGAAAAGAAG
ATGGCGCATCCGTTATAAGATCCACGGTTGAGTATGAAGTTGATGCAGAGCATGCCAAGAATGTCTCCTTTGTCAGCACA
GAAGCAATGGCTTCTATTGCTGAGGCCATCACCAAGTACATCAAGGAGCAGAAGAAGAGCCACGAGCAAGCCGCCGAGTA
A-------------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G522500
CAGATCCGATGCCGCGCGGAAGCGGGGGCCGCGGAGGTGGCTCAAAACCACGGGAGCCGACCGCCGCCGGCGTTCGAACG
CCGCGAGCTTGTCGAGTACGAGTACGAGCGCGAGCTCGCGGTCCGCCACCACGCCTCCTCCGGCTCCTCCGCCGCAGGGA
GCTCGTCTGCGGGTGCCTCGAGCTCGCGGCCCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCAGGCCGGTCGCCTTCAAG
CTCGAGGCCG-----------------TC-GC-GTCGAGGAGTAATCGGCCCCGAGGACTACCTCCCACCCCCCCCGGGG
GGGGGCAGGAGGAGCATGTAGAGCGCATCATCATGGAGCGCTCGGCGAGGGAGGGGGAGGAGG----------------C
CGACGCG--CGCCGCCGTCGCGAGCTCGAGTACGAGCAGATCTTCCTCCAGACGGGCGTCGCGGCGTCGC--------AG
GCGCACGCATCCAAGGAGGCGGACCTGCGCGTCATGAAGGCCGAGCAAGCCAAGGTCTTCATTGACCTCGACTCCGACGA
GGACT---GAACTCCTCTGGCTCCTCCGCCGCGTCGTCGCCGTCGCGAGCTCGTCAATTTTGGTAGCGCAGGCTCGGGTG
CACTGCATGGCCCACAGATTCCC---CCC-------TAGTAGTACAATGTAGTAT-AACGATGAATTATGT--ATAATCA
ATGTAGTATGATGATGAACTATGTATGATCAATGTCGTTGCAAGTTTCTCCGTGATTGTTT--TTTTTTAA-----TTTT
ACAGTTTCATATACGGGGTATGATCTGCAGCACACGAATTCATCCCGCAATC----------------TAAACGCATTTT
GCGGGTTGGCATTATACGGGGTCCGCTAGAGATGCTCTAAGGATAGTCATTGATGGATGGATGTAATCACGTTGTGATCC
AAACCTGTGGTCTACAGAATACCATATCGCAACAGA---CTCCAATACTTCAACATCCACACAAAAGGAGACTTGAACAG
AATTCCTCGCATCACATCTTCTTGGACTCCAGCAGCACGAGAGAGCAATGGAAGGGGGCAGCCTCTGGCACGAGTACGAG
ACGGACCTCCGGGCCGCCGACGTGTGGGAGGTCTATGGCAGCCTCGCTCTCGGGCAACTAGCCCCCCAGCTGCTCCCGCA
CGTCCTCTCAAAGGTCGAGCTTGTAGAGGGAGACGGCGGCGTCGGCACAGTCCTGCTCGTCACTTTCCCTCCTGCAGGTC
CGAATCTCAAAAGCTCGGCTTCAGGATGGTACAGATGTAATCGCAGCTTCAATCAGTTTTTAGTTACCTGCATGTGCTGA
ATCATTTTGTTAGGAGCTTCCGAACCAAGAAGCCACAAGGAGAAGTTCAACGTAGTCGACCATGAGAAGTACATCAAGGA
GGCAGAGACGGTGGAGGGAGGCTTTCTGGATCTCGGCTTCCGGAAATATTTGGTGCGATTCAAGGTCGTAGGAAAAGAAG
ATGGCGCATCCGTTATAAGATCCACGGTTGAGTATGAAGTTGATGCAGAGCATGCCAAGAATGTCTCCTTTGTCAGCACA
GAAGCAATGGCTTCTATTGCTGAGGCCATCACCAAGTACATCAAGGAGCAGAAGAAGAGCCACGAGCAAGCCGCCGAGTA
AAATTCAGAAGAACA--TGCATGTAGCTGCATAAGAGTATGAAAGACGAAGTGTCCAACTGAAATGACTGTGGCAGCCAA
GTTCGAGCAAA--TTCCCCTGTACCATTTTGTTCTA----TATATGCAGTGCTCATGCCTTTGGAATTAATGTTTGTATG
TGTCACACCTGCATCACCAGTGGTGGATGCCGTGGACGTGTGAGGTGGGACCCGGCTGCCAGTTGGCATTGGTCCACTTG
TAAGCGCAACATTGAGCGTGTGTGGCTGGGTTATAAGGCCAGCGGTAGCCAGCAGGATAGGCAGGCATGATTTGTATCTA
AACTGGATCCCTCACCTACTCCTGTACTCTCATCTTCCTTGGCAAGAAAGCTATCTTCCCAAGTCCCATCTCATCCCCTT
TCCCTTCTGATCCGATCTGAGATGATGAGTTCGTGACAGTATGTTTTAGACTGTACTAGTTTCTAGGAGTACCTGTCAAC
ATGTGCAATATCTGTA----CGAATATTGTAGTTTAACACATGTGCAGAGGTCAAGCCATTGGCCATGAATGTTAGAAGG
GTGAAAAAAAATCCCTCTAATGAACCCTG------------------AAATATGAGCCT--ATAAGAGGACATGGAGTTT
CTAACCCTGAGCTCACATGCACACGGGTAAACTGTGAAATACAAAAAAATAGGAAAAAGATTCAAACAATTTTTTTTTTT
GTGGCAAACATTGATGAATGCTTCACCTCCGTGCAAAAATTCGTGATGTAATGTCATTTGTCGTGGCCTGAACAAAAATA
AAAAATCAATGCTTCAAAAAGACAAGTATTGGAAGCCTTTTGGAGCATCTTTTTTCCCCGGGCGTCCACCATGGTTATGT
TTGCTGGTTCACGTTCCTTTTTATT----ATTTAAACAATCTTAAATTCAATTTT--TTTTCAAAATAATGCCGTAACCG
T--CCGGTATATACCGACAGCCACG--------CTACCCCCACCCCACCACCATCCTCGGACATCTTCTATGTGAGGAAT
TGACTCAAC
>chr2B_1
CAGATCCAATGTCGCATGGAAGTGGGGGCCACGGAGTTGGCTC--AACCACGGGAGCCGGCTGTCGTCGGCATTCGAATG
CTGCAAGCTC------ATCGAGTACGAGCGCGAGCTCGTGGTCCGCTGCCACGCCTCCTTTGGCTCCTCTACCGCAGGGA
GCTCGTCCGCGGGCGCCTCAAGCTCGCGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTTGGGCCGCTCGCCGTCAAG
CTCAAGGCCGACGTG---CC------GCC-GC-GTCGAGGAGTAATCAGCCCCGAGGACTACCTACCCCC----------
CGGGTCAGGAGGAGCACGTAGAGTGCGTCATCATGGAGCGCTCTGAGAGTGAGGAGGAGGAGG----------------C
CTACGCG--TGCCGCCGCCGCGAGCTCGAGTGCAAGCAGATCTTCCTCCAGACGGGTGTCGCGGCGCCGC--------AG
GTGCACGCGTCCAAGGAGGCGGACCTGCGCGTCATGAAGGCCGAGCAGACCAAGGTCTTCATCGACCTCGACTCCGACGA
GGACT---GAACTCCTCTGGCTCCTTCGCCGCGTCGTCGCCGTCGCGAGCTCGTGGATTTTGGTAGCGTAGGCTCGGGTG
CGCTACATGGCCCGCAGATTCCC---CC---------AGTAGTTCAATGTAGTAT-AATGATGAACTATGT--ATAATTA
ATGTAGTATAATGATGAACTATGTATGATCAATGTCGTCGCAAGTTTCTAATGTGA----TTGTTTTTTTTTCAG-TTTT
ACAGTTTCATATACGGGGTCTGATATGCAGCGCACGAATTCCTCACAAAACTGATCGACAGCAAACTGTAAACGCATTTT
GCGGGTTGGCATTATACGGGGTCTGCTAGAC--GCTCTAAGGATAGTCATTGACGGATGGATGTAATCACGTTGTGATCC
GAACCTGTGGTCTACAGAATACCATATCGCAACTGACTCCTCCAATATTTCAACATCCACACAAAAGGGGACTTGAACAG
AATTCCTCGCATCACATCTTCTTGGACTCCGGCAGCGCCAGAGAGCAATGGAAGGGGGCAGCCTCTGGCACGAGTACGAG
ACGGACCTCCCGGCCGCCGACGTGTGGGAGGTCTATGGCAGCCTCGCTCTCGGGCAACTAGTCCCCCAGCTGCTCCCGCA
CGTCCTCTCAAAGGTGGAGCTTGTGGAGGGAGACGGCGGCGTCGGCACAGTCCTGCTCGTCACTTTCCCTCCTGCAGGTT
CGAATCTCAACACCTCAGCTTCAGGATGGTGCAGATGTAATCGCCGCTTCAGTCAATTTT----GACCTAGTTGTGTTGA
TTCATTTTGCTAGGAGCTTCCGAACCAAGAAGCTACAAGGAGAAGTTCAAGGTAGTGGACCATGAGAAGTACATCAAGGA
GGCAGAAACGGTGGAGGGAGGCTTTCTGGATCTCGGCTTCCGGAAGTATTTGGTGCGATTCGAGGTCGTAGGGAAGGAAG
ATGGCACGTCAGTTATAAGATCGACCGTCGAGTATGAAGTTGACGCCGAGCATGCCAAGAATGTCTCCCTTGTCAGTACA
GAAGCATTGGCTTCTGTTGCTGAGGCCATCACCAAGTACATCAAGGAGCAGAAGAAGAGCCACGAGCAAGCCAACGAGTA
AAATTCGGAAGAACATGTGCATGTAGCTGCATAAGAGTCTGAAAGACCAAGTGTCCAACTGAAGTGACTGTGGCAGCCAA
GTTGGAGCAAATTTTCCCCTGTACCATTTTGTTCTCTATGTATATGCAGCGCTCATGCCTTCGGAATTAATGTTTGTATG
TTTTAGATTG----------------------------------------------------------------------
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--------------------------------------------------------TAGTTTC------TACCTGTCAAC
ATGA-CAATATCTGCACGATCGAATATTGTAGTG--ATACATGTGCAGAGGTCA-GCCATTGACCATGAATGTTAGAAGT
GTGAAAAAT--TCCCTCTAATGAACCCTGTTACATGCCACTACTCTGAAATATGAGCCAGCATAAGTGGACATGGAGTTT
CTAATCCTGAGCTCGCATGCACCCGGGTAAACAGTAAAGTACGAAAAATAGGAAAAAATTCAAAGAA------TTTTTTT
GTGACAAACATTGACGAATGCTTCACCTCCGTGCAAAAAATCGTGATGTAATGTAATCCGTC------------------
-------------------------------GAAGCCTTTTGGAGCATCTTTTTTCACCAGACTGCCACCATGGTTATGT
TTGCTGGTTCACTTTCCTTTTTATTATTTATTTAAACAAGTTTAAATTCAAATGTAATTTTCAAAATCATGCTGTAACCG
CGGCCGGTATATACCGATAGCCACGCTACCCGCCTACCCCCACCCCACCACCAATCTCGGACATCTTCTATGTGAGGAAT
TGACTCAAC
>chr6B_1
CAGATCCGACGCCGCATGAAAGCGGGGGGTGCGGAGGTGGCTC--AACCACGGGAGCTGGCCGCCGCCGGTGTTCGAACG
TTGCAAGCTC------ATCGAGTATGAGCGCGAGCTTGCGGTCCGCCGCCACGCCTCCTCCGGCTCCTCTGCCACGGGGG
GCTCATCCGCGGGCGCCTCGCGCTTGCGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCGGGTCGCTTGCCGTCAAG
CTCGAGGCCGACGCG---CCGCCGTCACT-GC-GTCGAGGAGTGATCGACCCCGAGGACT----CTCCC-----------
CTGGGCAGGAGGAGCACCTAGAGCGCGTCGTCATGGAGCGCTCTGCGAGGGAGGAG---CAGGAG-------------GC
CGAAGCG--CGCCGCTGCCACGAGCTTGAGTACGAGTAGATCTTCCTCCAGACGGGCGTCGCGGTGTCGC--------AG
GCGCACGCGTCCAAGGAGGTGGACATGCGCGTCATGAAGACGAGGCATGCCAAGGTCTTCATCGACCTCGACTCTGACGA
GGACT---GAGCTCCTCCGGCTCCTCCGCCGCATCGTCGCCGCTGAGAGCTCGTAGATTTTGGTAGCGTAGGCTCGGGCC
CGCAGATC----------CCCCC---CCC-------AAGTAATACAATGTA--------GATGAACTATGT--ATGATCA
ATGTAGTATGATGATGAACTATATATGATCAATGTCGTTGCAAGTTTCTCCCGTAA----ATGTTTTTTTA-----TTTT
ACAGTTTCATATACAGGGTCTGATCTGTAGCGCACGAATTTGCCCCGCAA------------------------------
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>chr7D_1
CAGATCCGACGCCGCACGCAAGCGGGGCGCGCGGAGGTGGCTC--AACCGCGGTAGCCGGCCGCCGCCGGCGTTCGAACG
CCGCGAGCTG------GCCGGGTTCGAGCGCGAGCTCGCCCGCCGCCGCCACGCCTCCTCTGGCTCCTGTGCCGCGGGGA
GCTCGCCCGCGGGCGCCTCGAGCTCGCGGCTCACTCCGGTGAAGAGAGAGCCGGAGGAGCTCGGGCCGCGCGCCGTCAAG
CTCGAGGCCGACGCG---CCGCCG-------C-GTCGAGGCGTGATCGGCCC-GAGGACTACCT-CCCC-----------
CGGGCCAGCAGGAGCACCTCGAGCGCGTCGTGATGGAGCGGTCGGTAAGGGAGCAG---GAGGAA-------------GC
TGAAGAG--CGCCACCGTTGCGAGCTCGAGTATGAGCACATGTTCCTTGAGACGGGCGTCGCGGCGTCGC--------AG
GCACGCGCGTCCAAGGAGGCGGACCTGCGCTTGATGAAGGCGAAGCAGGCAAAGTTCTTCATCAACCTCGACTCCTCCGA
TGAGGACTGA----------------------------------------------------------------------
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>chr6A_1
CAGATCCGACGCCGCACGCAAGCGGCGGGCGCGGAGGTGGTTC--AACCACGGGAGCTGGCCGCCGCCGGCGTTCGAACG
C-GCGAGCTC------TACGAGTACGAGGGAGAGCTCACGGTGCGCCACCATGCCTCCTTCGGCTCCTCTGCCGCGGGGA
GCTCGTCCGCGGGCGCCTCGAGCTCGCGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCGGGCTGCTTGCCGTCAAG
ATCGAGGACTAC----------------------------------------------CT----CCCCC-----------
TGGGACAGAAGGAGCACCTAGAGCGCGCCATCATGGAGCGCTCGGCGAGGGAGGAGGAGGAGGAG-------------GC
CGACGCG--CGCCACCGCCGCGAGCTCGAGATCGAGCACATCTTCCTCGAGCAGGGCGTCGCGGCGTCGC--------AG
GT--GCACGTCCAAGGTGGCGGACCTGCGCGTCATGAAGGCCGAGCAGGCCAAGGTCTGGATTGACCTCAACTCCGACGA
GGACT---AAGCTCCTCCGGCTCCTCCGCCGCGTCGTCGCAACCGCGAGCTCATCGATGTTGGTAGCGTAGGCTCGGG-A
CGCTGCATGGCCTGCAGATT-CC---CCC-------TAGTAGTACAATGCAGTAT-AATGATGAACTATGT--ATGATCA
ATGTAGTATGATGATGAACTATATATGATCAATGTTGCTGCAAGTTTCTCCCGTGA----T--TTTTTTAA-----TTTT
ATAGTTTCATATACAGGCTCTGATCTATAGTGCATGAATTCTCCCCGCAAAT----------------CAAA--------
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>chr2B_5
----TCCGATGCCGCACGCAAGTGGGCGGCGCGGAA-TGGCTC--AACTATGGGAGCCGGCCGCCGCCAGCGTTCGAACG
CCGCAAGCTC------GATGAATGCGAGCCCGAGCTCGTGGTCCTCCACCGCGCCTCCTCCGGCTCTTCTGCCACGGGGA
GCTCGTCCACGAGCGCCTCGAGCTCGTGGCTTACTCCGGTCAAGAGAGAGCCGGAGGAGCTCGGGCCTCTCGCCATCAAG
CTCGAGACCGATGTGGACCC------GCC-GC-GTCGAGGCATCATCGGCCCCGAACACTACCTTCCCC-----------
GGGGGCAGGAGGACTACCTTGACCGCGCCATCATGGAGCGCTCGGCGAGGGAGAAA---GAGGAG-------------GC
CGACGCG--CGCCACCGCCGCGATCTCGAGATCGAGGAGATTTTCCTTGAGTAGTGCGTCGCGGCATCGC--------AG
GCGCACGCGTCCAAGGAGGCGGACCTGCGCGTCATGAAGGCCGAGCAGGCCATGGTGTGGATCGACCTCGTCTCCGACAA
GGACT---GAGCTGCTCCGGCTCCTCCGCCGCGTCGTCGCCGCCGCACC--CGTCGATTTTGGTAGCCTAGGCTCGGGTA
TGCTGCACGGCCCGCAGACCCCC---CCCCCCTATATAGTACTATGATGTAGTAT-GATGAACAACTATCT--ATG----
AAGTAGTATGATGGTCAACTATGTATGATGATTTTCGTTGCAAGTTTCTCCCGCAA----ATGTTTTTTTA-----TTTT
ACAATTTTATATATGGGGTCTGATCTACAGCGCATGAATTCGCCCAACAATC----------------T-----------
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>chr7D_5
----TCCGACGCCGCACGCAAGCGCGGGGCGCGGAAGTGGCTC--AACTATCGGAGCCGGCCGCCGCTGGCGTTCGAAAA
CTGCGAGCTC------GACAAGTACGAGCGCGAGCTCGCGGTCCGCCGCCGCGCCTCCTCTGGTTCCTCTGCCGCGGGGA
GCTCATCCGCGGGCGCCTCGAGCTCGCGGCTCACTCCGGTCAAGAGAGAGCCTGAGGAGCTCGGGCCGCTTGCTGTCAAG
CTCGAGGCCGACGCGGACCC------GCC-GCGGTCGAGGCGTTATCGGCTCCGAAGACTACCTCCCCC-----------
TGGGGCAGGAGGACCACCTCGAGCGCGCCATCATGGATCACTCGGCGAGGGAGGAG---GAGGAG-------------GC
CGACGCG--CGCCGCCGCCGTGAGCTCGAAATTGAGGCGATCTTCCTCGAGCAGGGCGTCGCGGCGTCCT--------AG
GCGCACGCGTCCAAGGAGGCGGACATGCGCGTCATGAAGGCCGAGCAGGCCAAGGTCTGGATCGACCTCGACTCCGACGA
GGACT---GAGCTCCTCTGGCTCCTCCGCCGCGTCGTCGCCGCCGCACA--CGTCGATTTTGGTAGTCTAGGCTCAGGTA
CGCTGCACGACCCACAGATC-CTCCTCCCCCCTATGTAGTACTATGATGTAGTAT-GATGAACAACTATAT--GTG----
ATGTAGTATGATGATCAACTATGTATGATGAATGTCGTGGCAAGTTTCTCCCGCGA----ATGTTTTTTTTTCAAATTTT
ACAGTTTCATATACGGGGTTTGATCTGCAGCGCACGAATTCGCCCAGCAAAT----------------CT----------
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>chr5B_5
----TCCGATGCCGCACACAAGCAGGGGGCGCGGAGGTGGCTC--AACTACGGGAGCCGGCCACCGCCGGCGTTCGAACG
CCGCGAGCTC------GACGAGTACGAGTGCGAGCTCGCGGTTCGCCGCCACACCTCCTCTGGCTTCTCTACCGCAGGGA
GCTCGTTCGCGAGTGCCTCGAGCACATGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCAGGCCGCTCGCCGTCAAG
CTCGAGGCTGACGCGGACCC------GCC-TC-GTCGAGGAGTAATCGGCCCTGAGGACTACCTCCCCT-----------
TGGGGCAGGAGGAGCACCTCGAGCGCACCATCATGGAGCGCTCAGCGAGGAAGGAG---GAGGAG-------------GC
CGACGCGGGCGCTGCCGCCACGAGCTTGAGATTGAGAAGATCTTCCTCAAGCAG--------GGCGTCGTGGCATCGCAA
GTGCACGCATCCAAGAAGGCAGACCTACGCGTCATGAAGGCCCAGCAGGCCAAGGTCTGGATCGACCTCCACCCCGATGA
GGACT---GAGCTCTTCCGGCTCCTCCGCCGCGTCATCGCCGCTGCGAGCTCGTCAATTTTGGTAGCATAGGCTCGGGTA
CGCAACACGGCCCGCAAATTCCC---CCC-------TATTAGTACAATGTAGTAT-AATGATGAACTATGT--ATGAT--
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>chr6B_25
G-----------------------GGGCGCACGGAGGTGGCTC--AACCACGGGAGCCGGCCGTCGTAGGCGTTCGAACG
CCGTGAGCTC------GTCGAGTATGAGCACGAGCTCGCGGTCCACCACCACACCTCCTCCGGCTCCTCTGCTGCGGGGA
GATCGTCCGCGGGCGCCTCGAGCTCGCGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCGGGTCGCTCGCCGTCAAG
TTCGAGGCCGACGCG---CC------GCC-GT-GTCGAGGAGTAATCGGCCCCGAGGACTACCTCCCCC-----------
-GGGGCAGGAGGAGCACCTAGAGTGCGTCATCATGGAGCGCTCGACGAGGGAGCGG---GAGGAG-------------GC
CGAAGCG--CTCCGCCGCCGCGACCTTGACTACGAGCGGATCTTCCTCGAGAAGGGTGTCTTGGCGTTGC--------AG
ACGCATGCGTCCAAGGAGGCGGACCTGCGCGTCATGAAGGCCGAGCAGGCCAAGGTCTTCATCGACCTCGACTCCGACGA
GGACT---GAGCTCCTCCGGCTCCTCCGCCGTGT----------------------------------------------
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>chr4B_31
------------------------------GCGGAGGTGGCTC--AACCACGGGAGCCGGCCGCTTGCGGCGTTCGAACG
CCGCGAGCTC------GACGAGTACGAGCGCGAGCTTGCGGTCCGCCGCCACGCCTTCTCCGGCTCCTCTGCCGCGCGGA
GCTCGTCCGCGGGCGCCTCGAGCTCGCGGCTCACTCTGGTCAATGGAGAGTTGTAGGAGCTCGGGTCGCTCGCCGTCAAG
CTTGAGGCCCACGCG---CC------ATC-GC-GTCGAGGAGTAATCGGCCCCGAGGTCTACCTCCCCC-----------
-GGGGCAGGAGGAGTACCTAGAGTGCGCCATCATAGAGCGCTCGGTGAGGGAGGAG---GCCGAC-------------GC
G-----------CGTCGCTGCGAGCTCGAGCACGAGCAAATCTTCCTCGAGACAGGTGTCGCGGCGTCGC--------AT
GCGCACACGTCCATGGAGGCGGACTTGCGCGGCACGCAGGCCGAGCACGCCAAGGTCTGGATCGACCTCGACTCCGATGA
GGATT---GAGCTCCTCCAGCTCCTCCGCCGCGTCATCACCGTCGCGAGCTCGTCGATTTTGGTAGCGTAGGCTCGGGTA
CACTGGACGGCCCACAGATTCCC---CCC-------TAGTAGTACAGTGTAGTAT-AATGATGAACTATGT--ATGATCA
ATGTAATATCATGATGAACTATGTATGATCAAGGTCGTTGCAAGTTTCTCCCGCGA----ATGCTTTTTTAG--AATTTT
ATAGTTTCATATACA-GGTCTAATCTGCAGTGCACAAATTCGTCCCGCAA------------------------------
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>chr3A_109
--------------------------------------------------------------------------------
----------------------------CGCAAGCTCGCGGTCCACCGCCACGCCTCCTTCGGCTCCTCTGCTGTGGGGA
GCTCGTCTGCGGGTGCCTCGAGCTCGCGGCTCACTCCGGTCAAGAGAGAGCCGGAGGAGCTCGGGCCGCTCGCCGTCAAG
CTCGAGGCCGACGCG---CC------ATCGGC-GTCGAGGAGTAATCGGCCCCAAGGACTACCTCTCG------------
TGGGGCAGGAGGAGCACCTAGAGCATGTCATCATGGAGCGCTCGGCGAGGGAGGAG---CAGGAG-------------GC
CAACGCG--ATCCGCCACCGCCAGCTCGACTACGAGCGGTTCTTCCTCGAGCAG--------GGCGTCGC--------AG
GTGCTCGCGTCCAAGGAGGCAGACCTGCGCGTCATGAAGGCCGAGCAGGCCAAGGTCTTCATCGACCTCGACTTCGACGG
GGACT---GAGCTCCTCCGGCTCCTCCGCCGCGTCGTCGCCACCGTGAGCTCGTCGATTTTGGTAGCGTAGGCTCGGGTA
CGCTGCACGGCCCGCAGATCCCC---CCC-------AAGTAGTACAATGTAGTATAAATGATGAACTATGT--ATGATCA
ATGTAGTATGATGATGAACTATGTATGATCAACGTCATTGCAAGTTTCTCCCACTA----ATGC--TTTTCTAAAAATTT
ACAGTTTCATATACGGGGTCTGATTTGCAGCGCACAAATTCGCCCCTGCAA-----------------------------
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>chr7D_109
--------------------------------------------------------------------------------
----------------------------CGCAAGCTCGCGGTCCGCCGCCACGCCTCCTCCGGCTCCTCTGCCACGGGGA
GCTCGTCCGCGGGCGCCTCAAGCTCATGGCTCACTGCGGTCAAGAGAGAGCTGGAGGAGCTCGGGCCGCTTGCCGTCAAG
CTCGAGGCCGACGCG---CT------GCC-GT-GTCGAGGAGTAATCGGCCCCGAGGACTACCTCCTCT-----------
GGGGGCAGGAGGAGCACCTAGAGCGCGTCATCATGGAGCGCTCGGCGAGGGAGGAG---GAGGAG-------------GC
CGACGCG--CTCCGCCGCCGCGAGCTTGACTACGAGCGGATCTTCCTCGAGCAG--------GGCGTCGC--------AG
GCGCACACATCCAAGGAGGCGGACCTGCGCGTTATGAAGGCCGAGCAAGCCAAGGTCTTCATGGACCTCGACTCC-----
GGACT---GAGCTCCTCCGGCTCCTCCGCCGCGTCGTCACCGTCGCGAGCTCGTGGATTTTGGTAGCATAGGCTCAGGTC
CACCGCC--GCCTGCAGATTCCC---CCT-------AAGTAGTA----------------------------------CA
ATGTAGTATAATGACGAACTATGTATGATCAATGTCGT------------------------------------------
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>chr7A_109
--------------------------------------------------------------------------------
----------------------------CGCAAGCTCGTGGTCCGCCGCCACGCCTCCTCCGGCTCCTCTGCCACAGGGA
GCTCGTCCGCGGGCGCCTCGAGCTCGTGGCTCACTGCGGTCAAGAGAGAGCTGGAGGAGCTCGGGTCGCTCGCCGTCAAG
CTCGAGGCCGACGCG---CT------GCC-GC-GTCGAGGAGTAATCGGCCCCGAGGACTACCTCCTCT-----------
GGGGGCAGGAGGAGCACCTAGAGCGCGTCATCATGGAGCGCTCGACGAGGGAGGAG---GAGGAG-------------GC
CGACGTG--CTCCGCCGCCGCGAGCTTGACTACGAGCGGATCTTCCTCGAGCAG--------GGCGTCGC--------AG
GCGCACGCATCCAAGGAGGCGGACCTGCGCGTTATGAAGGCCGAGCAGGCCAAGGTCTTCATCGACCTCGACTCCGACGA
GGACT---GAGCTCCTCCGGCTCCTCCGCCGCGTCGTCGCCGTCGCGAGCTCGTGGATTTTGGTAGCGTAGGTTCAGGTC
CACCGCC--GCCTGCAGATTCCC---CCT-------AAGTAGTA----------------------------------CA
ATGTAGTATAATGATGAACTGTGTATGATCAATGTCGT------------------------------------------
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>chr5B_192
--------------------------------------------------------------------------------
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-------------------------------CACTCTGATCAAGAGAGAGCCGGAGGAGCTCGGGCCGCTCGCCGTCAAG
CTCGAGGCCGACGCG---CC------ACC-GC-GTCGAGGAGTAATCGGCCCCGAGGACTAGGTACCCC-----------
CGGGGCAGGATGACCACCTAGAGCGCGTCATCATGGAGCACTCGGGGAGGGAAGAT---GAGAAGGCCGACGCGCTCCGC
C---------------GCCGCAAGCTCGACTACGAGCGGATCTTCCTCGAGCAG--------GGCGTCGCGGCGTCGCAG
GCACACGCGTCCAAGGAGACGGACCTGCGCGTCATGAAGGCCGAGCAGGCCAAGGTCTTCATCGACCTCGACTTCGACGA
GGACTGATGAGCTCCTCCGGCTCCTCTGCCACGTCGTCGCCGCCGCGAGCTCGTTGGTTTTGGTAGCGTAGGCCCGCGTT
CGCTGCACGGACCGCAGGTT-CT---CCC-------TAGTAGTACAATGTAGTAT-AACGATGACTATGTATGATC----
ATGTAGCATGATGATGAACTATGCATGGTCAATGTTGTTACAAGTTTCTCCCATGA----ACGTTTTTTTTA--G-TTTT
ACAGTTTCATAAACAGGATCTAATTTGCAGCGCACGAATTCATC------------------------------------
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>chr5A_192
--------------------------------------------------------------------------------
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-------------------------------CACTCCAGTCAAGAGAGAGTCGGAGGAGCTCGGGCCGTGCGCCGTCAAG
CTCAGGGCCGACGCG---CC------GCC-GC-CTCGAGGAGTAATCGGCCCCGAGGACTATCTCCCCC-----------
CGAGGCAGGAGGAGCACCTAGAGCGCGTCATCATGGAGCGCTCGGCGAGGGAGGAG---GAGGAG-------------GC
C---------------GCCGCGAGCTGGAGTACGAGCAGATCTTCCTCAAGATGGGCGTCGCGGCGTCGC--------AG
GCACACACGTCCAAGGAGGCGGACCTGTGCGCCATGAAGGTCGAGCAGGCCAAGGTCTGGATCGACCTCGACTCCAACGA
GGACT---GAGCTCCTCCAGCTCCTCCGCCGTGTCATCGTCGCAACGAGCTCGTCGATTTTGGTAGCATAGGCACGGGTA
TGCTGCATGGCCCACAGATTCCC---CCC-------TAGTGGTACAATGTTGTAT-AATGATGAACTATGT--ATGATCA
ATGTAGTATGATGATGAACTATGTATGATCAATGTCGTTGCAAGTTTCTCCCGCGA----ATGCTTTTTTTAAAAAATTT
ACAGTTTCATATACGGGATCTGGTCTGTAGCGCACAAATCCGCCCCGCAA------------------------------
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>chr2A_972
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------------------TTCTTGGACTCCAGCAGCGCGAGAGAGCAATGGAAGGGGGGAGCCTCTGGCACGAGTTCGAG
ACGGACCTCCCGGCCGCCGACGTGTGGGAGGTCTATGGCAGCCTCGCTCTCGGGCAACTAGTCCCCCAGTTGCTCCCACA
GGTCCTCTCAAAGGTCGAGCTTGTAGAGGGAGACGGCGGCGCCGGAACAGTCCTGCTCGTCACTTTCCCTCCTGCAGGTC
CGTGTCTCAAAACCTCAGCTTCAGGACGGTGCAGATGTAATCGCAGCTTCAGATTATTTT----TACTTACTTGCGCTGG
TTCATTTTGCTAGGAGCTTCCGAACCAAGAAGCTACAAGGAGAAGTTCAACGTAGTCGACGATGAGAAGTACATCAAGGA
GGCAGAAACGGTGGAGGGAGGCTTTCTGGATCTCGGCTTCCGGAAATATGTGGTGCGATTCGAGGTCGTTGGGAAGGAAG
ATGGCACGTCGGTTATAAGATCGACCGTCGAGTATGAGGTTGATGCCGAGCATGCCAAGAATGCCTCCCTTGTCAGCACA
GAAGCAGTGGCCTCTATTGCTGAGGCCATCACCAAGCACATCAAGGAGCAGAAGAAGAGCCCCGAGCAAACCCCCGAGTA
AAATTCAGAAGAACT--TGCATGTGCCTGGATAAGAGTCGGGAAGACGAAGTGTCCAACTGAAGTGACTGTGGCAGCCAA
GTTGGAGCAAA--TTCCCCTGTACCATTTTGTTCTA----TATATGCAGTGCTCATGCCTTTGGAATTGATGTTTGTATG
TTTTAGATTATAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ACTAGTTTC------TACCTGTCAAC
ATGTACAAAATCTGTA----CAAATATTGTAGTTTAACACAAGTGCAGAGGTCAAGCCATTGGCCATGAATGTTAGAAGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------
>SNPs
---------------S---------------------------SS--------------S--------------------
---------SSSSSSS-----------------------------------------------------S----------
------------------------------S-------------------------------------S-----S-----
-------------------------------------------------------------------S--SSSSSSSSSS
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
---------------------------------------------------SSS-SSSSS--------------------
-------------------S-----------S------------------------------------------------
-----------------------S------SSS--------------------S--------------------------
S--------------------------------S-------------S--------------------S-----------
------------------------------------S-------------------------------------------
----------S--------------------------------------------------S------------------
--------------------------------------------------------------------------------
------------S---S-------------S--------------------S---S----SSSS-----S-S--------
S--------S-----------------------S----------------------------------------------
------S------------------------------------------------------S----------S--S----
-----S-S--S-----------S--S--S-----------------S---------------------S-----------
------S-----------------------------------------------------------------S-------
--------------------------------------S------------------------S----------------
---S----------------------------------------------------------------------------
-S-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------SSSSSS-----------
----S---------------------------------------------------------------------------
--------SSS-----------------------------------------------S-------S-------------
----S---------S-------S---------S--S--S---S-----SSS-S-----SSSSS-S-SSSSSSS-------
---S----------S------------------------S--------------S--SS---SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S--S-S-SS---------------
------------S--------------------------SS----------S-S-------------S----S-------
S----------------S-----------------------------------SS-------------------------
---------
>forward_1077
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-----------------CTTCTTGGACTCCAGCAGCA-------------------------------------------
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---------
>reverse_1965
--------------------------------------------------------------------------------
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--------------------------------------------GTAGCCAGCAGGATAGGCAG----------------
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---------
