>input_sequence_74720
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---------------------------------------CTATAAATACCATTCGCCATGCACACACCCACTCACACACA
GAGCAAGCGCACATCACAAGCACAAGCAGC----------------TCGATCGCACTAGCTTTGCTGC-----ACGACCT
G----CTCCGTCACAAATGGCCATGGCACCGAGAGCGTTGCTCCTCCTGGCCGTTGGGCTCATGGTCGTGGCCTCGGCGA
GCGCCCACGGCGGCTAC---------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAGGGAC
GGGCTGAAGGTGAAGGCGTGCGTGAACGTGCTGGGCCTGCTCAAGGTCAATGTCAACCAGCCGCGCGACGAGCACTGCTG
CTCGCTCCTCGACGGGCTCGTCGGTCTGGACGCGGCGCTCTGCCTCTGCACAAATCTCCATGCCAATGTGCTCGGCCTCA
ACCTCAACCTCCCCGTCGACCTACGCCTCATTCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCAGTGCCCACAC
CACTAGATC-----------------GAGTA-------------------------------GCTTGATGTTGTCATGCC
TGGATTTGTA-AGCACTGTTTGTTTATTTGTTGGTACAA----T----GTTGTATTCTTTTGTTTCCCATGATTT---TT
TTTTGCGGGAATTTCCCATGATTATTTTGGTTTAATGTTCATCGA-----------------------------------
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>chr1D_1_TraesCS1D01G213400
TGAGGGACGTCGCCGATGCCGGGCCGGTCCAGCCGACCAAAGTTTCCTCCGGTCCCCATCCTATACCACCAACCCTTCGT
CTGCTCCGGATCCGACAGCGAGCCAAGAACCGAAACCTAC---ATA----GATGAGATTGCCATTGGG------------
----TCGAGAAG-ACATCCGTAGTAGATATCCAGGCATCGAATCAGACGATCCGACGCAGCCAGCAGCGAAGACCACCAC
CCCGCGCCGGCCGACCGTGTCCAGCATCAGATCAAGATCCGATCTGAACCCAGCAAC-----------CTCCTG------
----CCGCGTAGCCATCACCACACCGCGCGATGGGATCTCGCCGCCGCC---GCCGCACCGCGGACAGCGTCGACAAAGG
TAGCCCAGCCGCCGCGCCGCCGGACCGCACGCAAACCCAGCGGCTCCTCGTAGTCCAACCGTCCTGCGTCGGTGGATATG
CTTGAAGGGGAAGAAGTCCCGCCGCCGCACTGCCGGCTAGGCTTTGCCTGGTGGCGCTGCGGACGGCGGCGAGGAGGGTG
GGAGGCGGGAGGG--CTCGAAGGGAAGTGGGACTAGGGTTT---CCCCCCGGGTCGCCCACGGGAGCCGCCTTGGGTGGT
TTGTTGGGGGCGCTGCTGGAGATGCTCTAATATATCGGACGAGGCTGTGATCTGATTTGCGCTTTTG----TAGGTTGAA
GCCCTGATCGTATTGATCCCCGGTCATCAATTCATCATCATCTGAATTCTGAACAACCTTTCTGCCAGGATCACCAAATT
GACGCAGTTACCGCTAACTGCATGCCGACCGATGCCACATGCTTAATCCAGTA---AGCAAACAAAT-CATGA--ACTGG
ACGGAACATGCAATCGGAATATAAACACATTTGAAGCTATCACGGATGCATATGCATACGATCGAGTCCAAATCAAAAGA
GGCAATCATCCCTGACGCGCCAGCTCGGAACCACATGCACGGCC-------CCATCTCATCTCACACCGCTTTCCCATTG
GAGGCGAGCAATCTGAT--------ACACAATCT-CCATCTATAAATACCATTCGCCATGCACACACCCACTCACACACA
GAGCAAGCGCACATCACAAGCACAAGCAGC----------------TCGATCGCACTAGCTTTGCTGC-----ACGACCT
G----CTCCGTCACAAATGGCCATGGCACCGAGAGCGTTGCTCCTCCTGGCCGTTGGGCTCATGGTCGTGGCCTCGGCGA
GCGCCCACGGCGGCTAC---------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAGGGAC
GGGCTGAAGGTGAAGGCGTGCGTGAACGTGCTGGGCCTGCTCAAGGTCAATGTCAACCAGCCGCGCGACGAGCACTGCTG
CTCGCTCCTCGACGGGCTCGTCGGTCTGGACGCGGCGCTCTGCCTCTGCACAAATCTCCATGCCAATGTGCTCGGCCTCA
ACCTCAACCTCCCCGTCGACCTACGCCTCATTCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCAGTGCCCACAC
CACTAGATC-----------------GAGTA-------------------------------GCTTGATGTTGTCATGCC
TGGATTTGTA-AGCACTGTTTGTTTATTTGTTGGTACAA----T----GTTGTATTCTTTTGTTTCCCATGATTT---TT
TTTTGCGGGAATTTCCCATGATTATTTTGGTTTAATGTTCATCGAATAAAATCAAAAGGTAATTTGTATCGCGGAGTCGA
GCTTTTGGCACTTTGATATCGCCAT-------------------------------------------------------
----TGTTAATTACCTGATCAATACTCATGCGTGCGTC-AACTAAATGAACGGCCCAACCTGAAAAGTGAAAACACTCAC
GGTACATTTTCTTGCGATCATGTATGAACCACC-----------------------------------------------
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--------AAAGGATATTATATTCGTATCTGG----ATAATACTCTAATGTTTCTAAGCAACATGAGATCGTGGACTGTT
CTACAAGGGTATACGGTGGGATATATAAATGCATAAAAGCTTGGCCCTTGTGGACTTTTCTCGGGAAAAAGAAGATATGC
TAATGCGGAGGAAATTGCACAAACCACCAACTGTTGGGGTTAACCTTGCATAAAACATCATACTATTCAGGTTTGCTGCA
AAAAACACACCATCTATTAGTATAATCCGTTGCAGTTTGCTCTAATCCACCGTTTAATTCCGTTGACATGATTCGATGGG
TGAGTCCCGCTTGTAAGTGTATATGTGGCAAAAAAAATAGGCCACACCGGTCA---GCTTACTAAAGCGGCCAATATCAC
CCGAATCAGTGGTCAAAATTAACCAAAAAT--TTAGATCAGTACTAATTACATATATGACTTATTGGATTTCTTTGTATT
TTCTTGAAAACATGGAACTTCAAATAATTTCATTGTATGAACCAACTAAACTACCAATTCCTCTCAAACATGTGACCTCC
TTAAGGTAAAAA---TATTCTATTACCGGGATACATATATAATTTACTATGGTTTTTTTAGATTTTTGTATAACATTGAA
TTTTGATACAAAAGTTTGAATGTTGGTCAGTTGATGTGGTCAGCGGAGGAAAACCCAGCTACATGTGCGGAAACATAAAC
AACAAATTGAACCCTAGTCATGCCTCTGCAACTAGCTCATGTACTGATGATGATCTTGCTCTCTTGATCATGAGCATTGT
TATAGTAACAAAGATGTTATCAATAATGAGAACATATTGTTATTCAACAATG-
>chr1D_1
TGAGGGACGTCGCCGATGCCGGGCCGGTTTAGCCGACCAAAGTTTCCTCCGGTCCCCATCCCATACCACCAAACCTTGGT
CTGCTCCGGATCCGGCAGCGAGCCAAGAACCGAAACCTACATAATA----GATGAGATTGCCATGGGG------------
----TCGAGAAG-ACATCCGTAGTAGATATCCAGGCGTCGAATCAGACGATCCGACGCAGCCAGCGGCGAAGATCACCAC
CCCGCGCCGGCCGGCCGTGTCCAGCATCAGATCGAGATCCGATCTGAACCCAGCGGCAC--CTGCAACCGCAAG------
----CCGCGTAGCCATCACCACACCGCGCAATGGGATCTCGCCGCCGCC---GCCGCACCGCGCACAACGTCGATAAGGG
TAGCCCAGCCGCCACGCAGCCGGACCCCACGCAAACCCAGCGGCTCCTCGCAATCCAGCCATCCCGCGCCGGTGGAGATG
CTTGAAGGGGAAGAAGTCCCGCCGCCGCCCTGCCGGCAAGGCTTTGCCTGGTGGCGCTGCGGACAGCGGCGAGGAGGGTG
GGAGGCGGGAGGG--CTCGAGGGGGAGTGCGACTAGGGTTT---CCCCCCAGGTCGCCCATGGGGGCGGC----------
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>chr5D_1
TGAGGGACGTCGCCGATGCCAGGCCGGTCCAGCTGACCAAAGTTTCCTCCTGTCCCCATCCTATACCACCAA-TCTT-GT
CTGCTCCGGATCCGGCAGCGAGCCAAGAACCGAAACTTAC---ATA----GATGAGATTGCCATGGGA------------
----TAGAGAAG-ACATCCGTGGTAGATATCCAGGCGTCGAATCAGACGATCCGACGCAGCCAGCGGCGAAGACCACCAC
CCCGCGCCGGCCGACCGTGTCCAGCATCAGATCGAGATCCGATCTGAACCCGGCGACAC--CCGCAACCTCCTG------
----CCGCGTAGCCATCACCACACCGCGCGATGGGATCTCGCCGCTGCCGCCGCCGCACCGCGCACAACGTCGACAAGGG
AAGCCCAGCCGCCGTGCCGCCGGACCCCATGCAAACCCAGCAGCTCCTCGCAATCCAGCTGTCCCGCGCCGGTGGAGATG
CTTGAAGGGGAAGAAGTCCCGCCGCCGCCCTGCCGGCCAGGCTTTGCCTGGTGGCGCTGCGGACGGCGGCGAGGAGGGTG
GGAGGCGAGAGGG--CTTGAGGGGGAGTGCGACTAGGGTTT---CCCCCCGGGTCGCCCACGGGGGCGGC----------
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>chr5D_1
TGAGGGACGTCGCCGATGCCGGACCGGTCCAGCCGACCAA-GTTTCCTCCGGCCCCCATCCTATACCACCAAACCTTCGT
CTGCTCCGGATCCGGCAGCGAGCCAAGAACCGAAACCTAC---ATA----GATGAGATTGCCATGGGG------------
----TCGAGAAG-ACATCTGTAGTAGATATCCAGGCGTCGAATCAGA-GATCCCACGCAGCCAGCGGCGAAGACCACCAC
CCCGCGCCGGCCGACCGTGTCCAACATCAGATCGAGATCCGATCTGAACCCCGCGGCAC--CCGCAACCTCCTG------
----CCGCGTAGCTAACACCACACCGCACGATGGGATCTCGCGGCCGCC---GCCGCACCGCGCATGACGTTGACAAGGG
TAGCCCAGCCGCCGTGCCGCCGGACCCCACGCAAACCCAGCGGCTCCTCGCAATCCAGCCGTCCCGCGTCGGTGGAGATG
CTTGAAGGGGAAGAAGTCCTGCCGCCGCCCTGCCGGCCAGGCTTTGCCTGGTGGCGCCGCGGACGGCGGCGAGGAGGATG
GGAGGCGGGGGGGAGCTCGAGGGGG-------------------------------------------------------
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---------------------------------------AGTGCGACTAGGGTTTCCCCCCCGGGTCGCCCACGGG----
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>chr7D_1
TGAGGGACGTCACCGATGCCGGGCCGGTCCAGCCGGCCAAAGTTTCCTCCATTCCCCATCCTTTACCACCAA-CCTTCGT
CTGCTCTG---CCGGCAGCGAGCCAAGAACCAAAACTTAC---ATA----GATGAGATTGCCATGGTG------------
----TAGAGAAG-ACATCCGTGGTAGATATCCAGGCGTCGAATCAGACGATCCGACGTAGCCAGCGGCGAAGACCACCAG
CCCGCGCCGGCCGGCCGTGTCCAGCATCAGATCGAGATCCGATCTGAACCCGGCGGCAC--CCGCAACCTCCTG------
----CCGCGTAGACATCACCACACCGCGCGATGGGATCTCGCCGCTGCT---GCCGCACCGCGCACAACGTCGACAAAGG
AAGCCCAGCCGCCGCGCCGCCGGATCCCACGCAAACCCAGCAGCTCCTCGCAATCCAGCCGTCCCGCGCCGGTGGAGATG
CTTGAAGGGGAAGAAGTCCCGTCGCCGCCCGGCCGGCCAGGCTTTGCCTGGTGGCGCTGCGGACGGCGGCGAGGAGGGCG
GGAGGCGGGAGGG--CTCGAGTGGGAGTGCGACTAGGGTTT---TCCCCCGGATCGCCCACGGGGGCGGC----------
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>chr6D_1
TGAGGGACGTCGACGATGTCGGGCCGGTCCAGCCGACCAAAGTTTCCTCCGGTCCCCATCCTATACCACCAA-TCTTCGA
CTGCTCCGGATCTGGCAGCGAGCCAAGAATCAAAACTTAC---ATA----GATGAGATTGCCATGGAG------------
----TAGAGAAC-ACA-CCGTGGTAGATATCCAGGCGTCGAATCAGACGATCCAACGCAGCCAATGGCGAAGACCACCAC
CCTGCGCCGGCCGACCGTGTCCAACATTAGATCGAGATCCGATCTGAACCCGGTGGCAC--CCGCAACCTCCTG------
----CCGCGTAGCCATCACCACACCGCGCGATGGGATCTCGCCGCTGCC------GCACTGCACATAACTTCGACAAGGG
AAGCCCAGCCGCCGCGCCGCCGGACCCCACGCAAACCCAGTGGCTCCTCGCAATCCAGCCATCCCGCGCCGGTGGAGATG
CTTGAAAGGGAAGAAGTCCCGCCGCCGCCCTGCCGGTCAGGCTTTT-CTGGTGGCGCTGCGTACGGCGGCGAGGAGGGTG
GGAGGTGGGAGGG--CTCGAGGGGGAGTGCGACTAGGGTTT---CCCCCTGGGTCGCCCACGGG----------------
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>chr3B_1
TGAGGGACATCGCTGATGCCGGGCCGGTCCAGCCGGCCAAAGTTTCCTCCAATCCCCATCCTATACCACCAA-CCTTCGT
CTGCTCCGGATCCGGCAGCGAGCCAAGAATCGATACTTAC---ATA----GATGAGATTGCCATGGTG------------
----TAGAGAAG-ACATTCGTGGTAGATATCCAGGCGTCGAATCAGACGATCCGACGTAGCCAGCGGCAAAGACCACAAC
CCCGCGTCGGGCGACCGTGTCCAGCATCAGATCAAGATCCGATCTGAACCCGGCGGCAC--CCGCAACCTCCGG------
----CCGCGTAGCCATCACCACACTGCGCGATGGGATCTCGCCGCCGCC---ACCGCACCAAGCACAACATCGACAAGGG
AAGCCCAGCCGCCACACCGCCGGACCCCAGGCAAACCCAGCGGCTCCTCGTAATCCAGCTGTCCCGCGTTGGTGGAGATG
CTTGAAGGGGAAGAAGTCCCGCCGCCGCCCTGCTGGCCAGGCTTTGCCTGGTGGCGCTGCGGACGTCGGCG---------
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>chr3A_1
TGAGGGATGCCGCTGATGCCGGGCCGGACCAGCCGACCAAATTTTCCTTCGGTCCCCATCCTATACCACCAAACCTTCGT
CCGCTCCGGATCCGGCAGCGAGCCAAGAACCGAAACCTAC---ATA----GATGAGATTGCCATGGGGCTCAACCCAATA
GGAGTCGAGAAGAACATCCGTAGTAGATATCCATCCGCCGAATCAGCCGATCCGACGTGAGCAGCGGCGAAGACCACCAC
CCCGCGCCGGCCGACCATGTCCAGCATCAGATCGAGATCCGATCTAAACCCGGCGGCACGCCCGCAACCACCTGGCCAAG
CCCACCACGTAGTCGTCACCATGCCATGAGATGGGATCCCGCCGCCGCC---GCTGCGCCGCGCACGACGTCGGCAAGGG
TAGCCCGCACGCCGCGCCGATGGACCCCACGTAAATCCAACGCCTCCTCGCGATCCAGCCATCCCGCGCCGGTGGAGATG
CTCGAAGGGGAAGAAGTCCCGCCACCGCCTTGTCGGCCAGGCTTTGCCTGGTGGCGCTGCGGACGGCGGCGAGGAGGGTG
GGAGGCGGGAGGG--CTCAAGGGGGAGGGCGGCTAGGGTTT---CCCCCCGGGTCGCCCATGGG----------------
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>chr7B_2
-GAGGGACGTCGCCGATGCCGGGCCGGTCCAGCCGACCAAAGTTTCCTCCGGTCCCCATCCTATACCACCAAACCTTCGT
CTGCTCTGGATCCGGCAGCGAGCCAAGAACCGAAACCTAC---ATA----GATGAGATTGCCATGGGG------------
----TCGAGAAG-ACATCCGTAGTAGAT-TCCAAGCGTCGAATCAGACGATCCGACGCAACGAGCGGTGAAGACCACCAC
CCCACGCCGGCCGACCATGTCCAGCATCAGATCGAGATCCGATCTAAACCCGGCGGCAC--CCGCAACCTCCTG------
----CCGCGTAGCCATCACCACACCGCGCGATGGGATCTCGCCGCCGCC---GCCGCACCGCGCACAACATCGACAAGGG
TAGCCCAGCCGCCACACTGCCGGACCCCATGCAAACCCAGCGACTCCTCGCAATCCAACCGTCCTGCGCCTGTGGAGAGG
CTTGAAGGGGAAGAAGTCCTGCCGCCGCCCTGCCGGCCAGGCTTTGCCTGGTGGCACTGCGGACGGCGACGAGGAGGGCG
GGAGGCGGGAGGG--CTCGAGGGGGAGTGCGACTAGGGTCCCCCCCCCCCCGGTCGCCCACGGGGGCGGC----------
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>chr1B_4
---GGGACGTCGCCGATGCCGGGCCGGTCCAGCCGACCAAAGTTTCCTCCAGTCCCCATCCTATACCACCAAACCTTCGT
CTGCTCCGGATCTGGCAGCGAGCCAAGAACCGAAACCTAC---ATAGATAGATGAGATTGCCATGGGG------------
----TCGAGAAG-ACATCCGTAGTAGATATCCAGGCGTCGAATCAGA-GATCCGACGCAACCAGCGGCGAAGACCACCAC
CCTGCACTGGCCGACCATGTCCAGCATCAGATCGAGATCCGATCTGAACCCGGCGGCAC--CTGCAACCTCCTG------
----CCGCGTAGCCATCACCACACCGTGGGATGGGATCTCGCCGCCT---------CACCGCGCACGACGTCGACAAGGG
TAGCCTAGCCTCCACGCCACCGGACCACACACAAACCCAGCGGCTCCTCGCAATCCACCCGTCCCGCGCCGGCGGAGATG
CTTGAAGGGGAAGAAGCCCCGCCGCCGCCCTGCTGGCCAGGCTTTGCCTGGTGACGCTGCGGACGGCGGCGAGGAGGGTG
GGAGGCGGGAGGG--CTCGAGGGGGAGTGTGACTAGC--CCCCCCCCCCCAGGTCGTCCACGGGGGCGGC----------
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>chr1D_614
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--------------------------CTAACATATGGTACCAGGCCGTGATTTGATTTCTGTCTTTGTAGCTAGGTTGAA
GCCCTGGTCAGATTGATCCCC------TGG-TCACCATGATCTGACCTCTGAACCAACTGTCTGCCTGGATCACCAAATT
TACGTAGTCACCACTAACTGCATGCCGACCGATGCCACATGCTTAACCCAGTA---AGCAAACAAATATATGA--ACTGG
ACGTAACATGCAGTCGGAATATAAACACATTCGAAGGAGTCACGGATGCATATGTGCATA--CGAGTCCAAATCGAGGGA
GGCAATGATCCCTGACGGGCCAGCTCGGAACCACATGCGATGCGCGG--CACCATCTCATCTCACACCGCTTTCCCATCG
GAGGTGAGCAGCC--------TCATGTCATGC---------ATAAATACCACTCGCCATGCACACACTCACTCACACACA
GCAAGC-------GCACATTGCAAAGCACAATC----GCAGCTCGATCGCACGCACTAGCTTGCAC--------------
----GCTCCGTCGCAAATGGCCATGGCACCCAGAGCGCTGCTCCTCCTGGCCGTCGGGCTCGTGATCGCAGCCTCGGCGA
GCGCCCACGGCGGCTACGAG------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAAGGAC
GGGCTGAAGCTGAAGGCGTGCGTGGACGTGCTGGGCCTGCTCAAGCTCAAGGTGAACGTGCCGCGCCATGAGCCTTGCTG
CTCGCTCCTGGACGGGCTCGTCGGCTTGGACGCGGCGCTCTGCCTCTGCGCAAACATCGACGCCAATGTGCTCGGCCTCA
ACCTCCACCTCCCCGTCGACCTCCGCCTCATCCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCGGTGCCCAC--
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>chr1A_614
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--------------------------CTAATATATCGGACCAGGCTATGATCTGATTTGTGTTTTTG----TAGGTTGAA
GCCCTGATCATATTGATCCCCGGTTATCAATTCATCATCATCTGAATTCTCGACAACCTTTCTGCCAGGA-CACCAAATT
GACGCAGTTACCGCTAACTGCATGCCGACCGATGCCACATGCTCAATCCAGTAATAAGCAAACAAATACATGA--ACTGG
ACGGAACATGCATTCGGAATATAAGCACATTTGAAGCTATCACGGATGCATATGCATACGATCGAGTCCAAATGAAAAGA
GGCAATCAACCCTGACGCGCCAGCTCGGAAGCACATGCACGGCC-------CCATCTCATCTCACACCGCTTTCCCATTG
AAGGCGAGCAATCAGAT--------TCACAATCT-CCCTCTATAAATACCACTCGCCATGCACACACCCACTCACACACA
GAGCAAGCGCACATCACAAGCACAAGCAGC----------------TCGATCGCACTAGCTTTGCTGC-----ACGACCT
GCTAGCTCCGTCGCAAATGGCCATGGCACCCAGAGCGCTGCTCCTCCTGGCCGTCGGGCTCATGGTCGTGGCCTCGGCGA
GCGCCCACGGCGGCTAC---------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAAGGAC
GGGCTGAAGGCGAAGGCGTGCGTGAGCGTGCTGGGCCTGCTCAGGGT---------------------------------
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>chr1B_614
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--------------------------CTAACATATGGTACCAGGCCGTGATATTATTTCTGTCTTTGTAGCTAGGTTGAA
GCCCTGATGCGATTGATCCCCATCCCCTGG-TCGCCATCATCTAAATTCTGAACCAACTCTCTTCCTGGATCACCAAATT
TACGCAGTCACCACTAACTGCATGCCGACCGATGCCACATGCTTAACCCAGTA---AGCAAACAAACACATGAACACTGG
AGGTAACATGCAGTCGGAAGATAAACACATTCGAAGCAGTCACGGATGCATATGTGCATA--CGAGTCCAAATCGAGGGA
GGCGAGCAGGCAC---------------------------------G--CACCATCTCATCTCACACCGCTTTCCCACCG
GAGGCGAGCAGCC--------TCACACAGGATCT-CCATCTATAAATACCACTCGCCATGCACACACTCACTCACACACA
GAGCAAGCGCACAGCACAAGCACAAGCACAAGC----ACAACTCGATCGCACGCACTAGCTTGCACTTACGCTACCACCT
----GCTCCGTCGCAGATGGCCATGGCACCCAGAGCGCTGCTCCTCCTGGCCGTCGGGCTGGTGATCGTGGCCTCAGCGA
GCTCCCACGGCGGCTAAGAG------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAAGGAC
GGGCTGAAGCTGAAGGCGTGCGCGGACGTGCTGGGCCTGCTCAAGCTCAAGCTGAACGTGCCGCGCGATGAGACTTGCTG
CTCGCTCCTCGACGGGCTCATCGGCTTGGACGCGGCGCTCTCCCTCTGCGCAAATATCGACGCCGATGTGCTCGGCCTCA
AGCTCCACCTCCCCGTCAACCTCCGCCTCGTCCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCGGTGCCCACCA
CGCCACTGAAAGGCGTCTCGTCT---GAGTA-------------------------------TCGTGATGTTGTCTTGTC
TGAATTTTTG-AGCGCGGTTTGTTTATTTCTTGCTACAACTGAT----GTCGCAATCTTTTGTTT---------------
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>chr1B_641
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-----------------------------------------------------GATTTATGCTTTTG----TAGGTTGAA
GCCCTGATCATATTGATCCCCGGTCATCTATTCATCGTCA-------TCTGAACAACCTTTCTGCCAGGATCACCAAATT
GACGCAGTTACCGCTAACTGCATGCCGACCGATGCCACATGCTCAATCCAGTA---AGCAAACAAATACATGA--ACTGG
ACGGAACATGCAGTCGGAATATAAACACATTTGAAGCTATCACGGATGCATATGCATACGAT--AGTCCAAATCAAAAGA
GGCAATCATCCCTGACGCGCCAGCTCGGAACCACATGCACGGCC-------CCATCTCATCTCACACCGCTTTCCCATTG
GAGGCGAGCAATCTGAT--------ACACAATCTCCCATCTATAAATACAACTGGCCATGCACACACCCACTCACACACA
GAGAAAACACACATCACAAGCACAAGCAGC----------------TCGATCGCACTAGCTTTGCTGC-----ACGACCT
----GCTCCGTCGCAAATGGCCATGGCACCGAGAGCGTTGCTCCTCCTGGCCGTCGGGCTCATGGTCGTGGCCTCGGCGA
GCGCCCACGGCGGCTACGTGATGCAACCAGGGTTAACGTTAACATTGTTGCTGCTCAAACATTGTCATGTGCCAAAGGAT
TATGGATGAAAGAGGATAAGAAATTCTACGTATTTCCAGGAGAAAGTGCATGCATGTACGTATATTTTGGAGAGCGTGGT
TTGCATGCTACTAATGCATGTAAAGATTCCAGTTTTTTTGGAGATAGAAGAAACGAAGCATGCATGGTTAATATGGAGGA
TTTGCTAGCTGCTCGTACAAGGTTGCAAGTACACGAATTTTATTCAGTTGGAATTAAAGGAGATGGTGCTGGTTACTACT
TTGACATGCCACGCCCACCTGAAGAGATAGAAAGAAATTGCAGGAGGTTTGTGTCGTGGAGAACTCTATCCTTGTGTGCC
TTGGGATGGGGTCCACCACAAACGGACCAACAAACAGTCCATGTTAATATAGAGATTAACTTGCCAAACTATAAAACAAG
TAATCTAATAGAAATTTTAGAGTCCTAGTTTTAGAAGGTAGCTTTTCTTTATCTATCTATCTTCTACGTGAGATGGATGG
TAGGATGTGATGCTTGTTTCCCAAGCTAGTTGGCTTTCATAGCTATTATATAAGGCCAAGCCAGTACGATGTAAGGAGGA
TAGGTTATATTTATATATATGAAATAGACAAATGTGTTTTCAGGGGTAGACACCCGTATTAAGTTTTTGATGTAGCTTTA
GAAAACCTTTTTGTTGCGATTTCTGTGAGGAAATTGTTTTGTGTGTGAGGTGTCGTCGTCCAGATTGTTTCTCTTGTGCT
GAGCCGCAAGGTTCAAACCCTCTACTTCATGTACATCGCATGCACGGGTGAAAGGTTACTGCTACTGAAGGTGGAATACC
GTGAAAATCGGACCGCAACAAGAGACCGGATCTCGCCCTCGAGGTTCGATCCTTATCACTACGGGTCGTGCCCCAGGGAC
ATGCTGAAGGTGAAGGCGTGCGTGAACGTGCTGGGCCTGCTCAAGGTCAATGTCAACCAGCCGCGCGACGAGCACTGCTG
CTCGCTCCTCGACGGGCTCGCCGGCCTGGACGCGGCGCTCTGCCTCTGAACAAATCTCCATGCCAATGTGCTCGGCCTCA
AGCTCGACCTCCCCGTCAACCTACGCCTCATTCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCAGTGCCCACAC
CACTAGATC-----------------GAGTATTCCGTTTCGAAAAAAACTAGATCGAGTATTTCTTGATGTTGTCATGCC
TGGATTTTTA-AGCACTGTTTGTTTATTTGTTGGTAAAA----T----GTTGTATTCTTTTGTTTCCCATGATTATTATT
TTTTGCGGGAATTTCCCATGATTATTTTGGTTTAATGTT------ATAAAATCAAAAGGTAATTTGTATCGCGAAGTCGA
GCTTTTGGCATTTTGATATCGTCAATGTTAATTACCTACCAGGCGACAAGCGTGGTAAAAGCAATCTCAAATTGACAAAA
AAAATGTTAATTACCTGACCAATACTCATGCGTGCGTCGAACTAAATGAACGGCCCAACCCGAAAAGTGAAAACACTCAT
GGTAAATTTTCTTGCGATCATGTATGAACCATC-----------------------------------------------
--------------------------------------------------------------------------------
--------AAAGAATATTATATTCGTATATCTGGATATAATACTCTAATGTTTCTAAGCAACATGAGATCTTGGACTGGT
CTACAAGGGTATACGGTGGGATACATAAATGCATAAAAGCTTGGCCCTTGTGGACTTTTCTCGGAAAAAAGAAGATATGT
TAATGCGGAGGAAATTGCACAAACCATCAACTGTTGGGGTTAATCTCGCATAAAACATCATACTATTCGGGTTTGTTGCA
AAAAAAA---CATCTATCACTGTAATCCGTTGCAGCTAACTCTAATCCACCGTTTAATTCTGTTGACATGATTTGACGGG
TGAGTCCCGCTTGCAAGTGTATATGTGGCAAGAAA---ATAGGCCACATTGGTCCGGCTTACTAAAGCGGCCAATATCAC
CCAAATCAGTGGGCAAAAAAATAGGCCACACTGATCG---------GTTACATATATGATTTATTGGATTTCTTTGCATT
TTCTTGAGAACATGGAACTTCGAATAAATTTATTGAATGAACCAACTAAACTACCAGTTTCTCTC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr1D_739
AAACTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--CGTAGTCACCACTAACTGCATGCCGACCGATGTCACATGCTTAATCCAGTA---AGCAAACAAATACATGA--ACTGG
ACGTAACATGCAGTCGGAATATAAACACATTCGAAGCAGTCACGGATGCATATATGCATA--CGAGTCCAAATCGAAGGA
AGCAATGATCGCTGACGGGCCAGCTCGGAACCAC-----ATGCGCGGCACACCATCTCATCTCACACCGCTTTCCCATCT
CA-----------------TATCACACATAATCT-CCATCTATAAATACCACTCGCCATGCACACACTCACTCACACACA
GAGCAAGCGCACAGCACATTGCAA-GCACAAGCGCAGGCAGCTCGATCGCACGCACTAGCCTGCAC----GCTACCACCT
----GCTCCGTTGCAGATGGCCATGGCACCCAGAGCGCTGCTCCTCCTGGCCGTCGGGCTCATGGTCGTGGCCTCGGCGA
GCGCCCACGGCGGCTACGAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGGTCGTGCCCCAGGGAC
GGGCTGAAGCTGAAGGCGTGCGTGGACGTGCTGGGCCTGCTCAAGCTCAAGGTGAACGTGCCGCGCCATGAGCCTTGCTG
CTCGCTCCTCGACGGGCTCGTCGGCTTGGACGCGGCGCTCTGCCTCTGCGCAAACATCGACGCCAATGTGCTCGGCCTCA
ACCTCCACCTCCCCGTCGACCTCCGCCTCATCCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCGGTGCCCACCA
CGCCACTGAAAGGCGACTCGTCTGAGGAGGA-------------------------------TCTTGATGTTGTCCTGTC
TGAATTTTTTTAGCGCGGTTTGTTTATTTCTTGGTACAA----TTGATGTCGCAATCTTTTGT-----------------
------------TT------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>chr1A_753
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACCACTAACTGCATGCCGACCGACGCCACATGCTTAGTCCAGTA---TGCAAACAAATACATGA--ACTGG
ACGTAACATGCAGTCGGAATATAAACACATTCGAAGCAGTCACGGATGCATATGTGCATA--CGAGTCCAAATCGAGGGA
GGCAATGATCCCTGACGGGCCAGCTCGGAACCACATGCGATGCGCGGCACACCATCTCATCTCACACCGCTTTCCCATCG
GAGGTGATGAGCAGCCTCGTATCACACATAATCT-CCATCTATAAATACCACTCGCCATGCACACACTCACTCACACACA
CAGCAAGCGCACAT-----TGCAAAGCACAATC----GCAGCTCGATCGCACGCACTAGCTTGCAC--------------
----GCTCCATCGCAAATGGCCATGGCACCCAGAGCGCTGCTCCTCCTGGCCGTCGGGCTCGTGATCGCGGCCTCGGCGA
GCGCCCACGGCGGCTACGAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------GGGTCGTGCCCCAAGGAC
GGGCTGAAGCTGAAGGCGTGCGCGAACGTGCTGGGCCTGCTCAAGCTCAAGGTGAACGTGCCGCGCGATGAGACTTGCTG
CTCGCTCCTCGACGGGCTCGTCGGCCTGGACGCAGCGCTCTGCCTCTGCACAAACATCGACGCCAATGTGCTCGGCGTCA
ACCTCCACCTCCCCGTCAACCTCCGCCTCGTCCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTCCGGTGCCCAC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>chr1A_1253
CAAGGG--------------------------------------------------------------------------
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----------------------------------------------TCAATGTCAACGAGCCGCGCGACGAGCACTGCTG
CTCGCTCCTCGACGGGCTCGTCGGTCTGGACGCGGCGCTCTGCCTCTGCACGAATCTCCATGTCAACTTGCTCGACCACA
ACCTCGACCTCCCCGTCGACCTACGCCTCATTCTCAACAACTGCGGCAAGGTCTGCCCCACCGATTTTCAGTGCCCACAC
CACTAGATC-----------------GAGTA-------------------------------TCTTGATGTTGTCATGCC
TGGATTTTTG-AGCCCTGTTTGTTTATTTGTTGGTACAA----T----GTTGTATTCTTTTGT-----------------
------------TTCCCATGATTATTTTGGTTGAATGTTCATCGAATAAAATCAAAAGGTTATTCGTTTCGTGAAGTCGG
GCTTTTGGCACTTTGATATCGCCAT-------------------------------------------------------
----TGTTAATTACCTGACCAATACTCATGCGCGCGTC-AACTAAATGAACGGCCCAACCTGAAAAGTGAAACGGAATTA
CTGTACACACAACAGTTGCTGGCCGAACTCTGGATGATTGAAGAATCGAATGGTGCTGTTCACCTTTGCTCTACGCATCG
ATGGCTTGATGTGCTGCATCATCTGAAGATCATTCAGAACCCGTCGGCTGTGTAGCAGTGCTCAAAGTTAAAACATTATG
GACCAGCAAAAGGATATTATATTCGTATCTGG----ATAATACTCTAATGTTTCTAAGCAACATGAGATCTTGGACTGTT
CTACAAGGGTATACGGTGGGATATATAAATGCATAAAAGCTTGGCCCTTGCGGACTTTTCTTGGGAAAAAGAAGATATGT
TAATGCGGAGGAAATTGCACAAATCATCAACTGTTGAGGTAAACCTTGCATAAAACATCGTACCATGCAGGTTTGTTGCA
AAAAACACACCATCTATTAGTATAATCTGTTGCAGCTAGCTCTAATCCACTGTTTAATTCCGTTGACATGATTCGGTGGG
TGAGTCCCGCTTGTAAGTGTACGTGTGGCAAAAAA---AGGCCACACCGGTCA---GCTTACTAAAGCGGCCAATGTCAC
CCAAATCAGTGGTCAAAATTAACCAAAAATAATTAGATCAGTACTAGTTACATATATGACTTATTGGATTTCTTTGCGTT
TTCTTGAAAACATGGAACTTTGAATAATTTCATTGTATGAACCAACTAAACTACCAAATCCTCTCAAACATGTGACCTCC
TTAAGGTAAAAAATATATTCTAATACCGGCATACGTATATAATTTACTATG-TTTTTTTAGATTTTTGTATAACATTGAA
TTTTGATACAAAAATTTGAATGGTGGTCAGCTGATGTGGTCAGCGGAGGAAAACCCAACTACATGTGTGGAAACATAAAC
ACCAAATTGATCCCTAGTCATGCCTCTGCAACTAGCTCATGTATTGATGATGATCTTGCTCTCCTGATCATGAGCATTGT
TATAGTAACAAAGCTGTTATCAATAATGAGAACATATTGTTATCAAAACAATG
>SNPs
------------------------------------------------------------------------S-------
--------------S-------------------------------------------------S---------------
------------------------------------S----------------------------S--------------
------------------------------------------------------S-------------------------
---------------------------------------------------------------S---S------------
--------------------------S-------------------------S-----------------------S---
----------------------------S--------S------------------------------------------
--------------------S---S----S----------------------------------S--S--SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------------------S--------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------S-----------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------S------------------------------------------------------------------S-----
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
------------------S------------------------------------------------------------S
----S--------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------------------------------------------------S
--------------------------S------------------------------------------------S----
-----------------------------------S-S------------------------------------------
-----------------------------------SSS------------------------------------------
--S-------------------------------------------S-----------------------------S---
---------------------S----------------------------------------------------------
----------------------S------S----S----------------S----------------------------
-------------S--------S-------S--------------------------S---------S------------
-S--------S--------------------------------S-------------------S----------------
-------------S-----------------------------SS--SS-SS-
>forward_295
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GATCCGATCTGAACCCAGCA-------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_2714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GAGTCGA
GCTTTTGGCACTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------
