>input_sequence_74718
--------------------------------------------------------------------------------
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----------------------------------------------------------------ATGGAGAGATCGTCGT
CCCCTTCAAAGGTTCTCCTCGTCTTCCTCCTGCAGTTCCTCCTGCTCTCTGAACCTCAGGAAGCAAGGATACTAGGTGAG
TAGTAGT--ACATGAGTGCATACGCAATTTGTCCATTTTGTAGACATGCATGCATGCACGAT---T-------AAAGTTT
CTGTTCACAAGCATACACAATTCATGGATATATTTTCTTGGTTGGTTGATTTTCCGTTTGGTACAGGACAATTTCTCTTA
-TTCTTACCTTTTCCCCACTTCAGGTGATGCATACGACTACAAGAACCTGCTCGCGTCGGGTGTCGATGGAGATGCCGCA
GCGCTGCCCGCATCACACCTGAACCTCGCCGACGTTGCAGGGAACAGGCGTCCT---TTTGCGCCGCCAGCGCCGAAGGT
GCCCCCAC---------------------------CACCACACCATCTCCACGGAGATGGCGCGCATGAGCAGCATAGGT
CTCCGCCGGCGTCGACCTCCACTGAACCTGCACCACCGCGTGATTACAGTCGCCAACAGGCTGAAGCTGCAGGACACCAA
CCGATGATGGATGTATCTCGCGCGTTTCTCCAAGCGATCATGGGATATGTGACGAAAATGTAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1A_1_TraesCS1A01G367700
TGCTTCGTATGCTTTCCTGTTTTTTAAAGACAAACTGACTGCAATTTTAAATTTG-TTTTTGTTATAGTTTTAAAAAATT
TAGCACCTATTTATGCATCTGTTTTGTTAGGCTTCCCGGTGCAACGCGCAGGCCTTCATCTAGTTGTTTCTGAAGTTGTA
ACCCATGCAACCAATTGGCGTCAAAAACATAAGGAAAGGAAAAGGAGTGAGAACGATAGCTTA------TGAAGCTACAA
TCATTGCCCG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CATCATGCA
GAATACAAAACTCTAACGTAGGTAGTAATTATACC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACATATTCTACGGTTACACACCCCGAACGA
CAGAAAAGGGTGAGCACATGCATTGCAACAGCAAACAGGGCAGGTTTAGCTTCTTTTTATTTTGATGGAACAGGGCAGGT
ATAGCTAAAAACGTCCACTGGGACAAGTGGGCAACATGCTGATTCATTTAAAAAAAATTGTGGGGTGGGCAACATGCTGA
TACTAGTAC----AAGACTGTTTGTCTGTTTGTATCCTTGGGGGGCTCGCCAGAGGTCTTTGGTCTTGAAAAGAGAAGCC
ATTTAACACTTTGAAACTAGCCACAATGAAGAGTAACATATACTAGTAACATACACATATCCTTAGACTATGTTACTATC
TTTACAGTGGGTAGTAGCAAAAATGTGATGTTATACAAAGCTTTATTTATTAGGTTATAGACTCATATTGCATTGGGACA
TGTGATGTTATAGTAAACTACCTCTCTCCTTATTAACTCATTGTCACATAAACAAATTTGCTGAGTTAAATTCGATGTTA
CTGCTGAAGTTAGTCCTACTGTGGCTAGTCTGATAGCAAGGGATCGGGTGAGAGACTCATACGTTGACTAGAGAGTTAGG
CACATGGATGTCCACACGATTGAGCGAGCACCCCGGCCC------GCAGTACATATATC-------CTCGTTGCTCACAG
CCTCAACGCACACAGTTCTCGTACTGATCCACACAAGAGGACCTTAGCTACT----CTTAACCCATGGAGAGATCGTCGT
CCCCTTCAAAGGTTCTCCTCGTCTTCCTCCTGCAGTTCCTCCTGCTCTCTGAACCTCAGGAAGCAAGGATACTAGGTGAG
TAGTAGT--ACATGAGTGCATACGCAATTTGTCCATTTTGTAGACATGCATGCATGCACGAT---T-------AAAGTTT
CTGTTCACAAGCATACACAATTCATGGATATATTTTCTTGGTTGGTTGATTTTCCGTTTGGTACAGGACAATTTCTCTTA
-TTCTTACCTTTTCCCCACTTCAGGTGATGCATACGACTACAAGAACCTGCTCGCGTCGGGTGTCGATGGAGATGCCGCA
GCGCTGCCCGCATCACACCTGAACCTCGCCGACGTTGCAGGGAACAGGCGTCCT---TTTGCGCCGCCAGCGCCGAAGGT
GCCCCCAC---------------------------CACCACACCATCTCCACGGAGATGGCGCGCATGAGCAGCATAGGT
CTCCGCCGGCGTCGACCTCCACTGAACCTGCACCACCGCGTGATTACAGTCGCCAACAGGCTGAAGCTGCAGGACACCAA
CCGATGATGGATGTATCTCGCGCGTTTCTCCAAGCGATCATGGGATATGTGACGAAAATGTAACAAACCACGCCCGCATA
TGGCCTTTTTTTGTGA-TGAATCTCGTTGAAATTGTATCGTTTTGTGTAAATTTTTCGCATTTTGAAATAGAGCACACAA
GCTTTCAGCTCAAACCCCTGCTGAAG---TCATCGTTTCCTGTGCCGCTACTTTTTGTAAATCTCAGTGAACTGTAAATT
ATAGCCCGCAAAAAAAAACTGTAAACTAGTGGAAAGTGTTGGTTCATTGGATCGGTTAGGGTTAGGGATCTACGGTGGAG
TACCTTCTCCTTGACTCGAGGAACTCCCGGTGCCGGCCATGGTGACGGTGGCCGGTGATGGCAGAGAGTAGTGGCGGTGG
CGGTGCTTCACGTCACTACTGCGCGAAACCCTAGATCGGTGGGTGTATCGGTGGGCTCTAGGGAATCAAATCTTCTGTAT
GTTAGCATGAGGTCCTTCGTGCCTTGCGCATAACGCAAAGCTTTCTTTACCATCTTCTAGTGCTCTATGCCTGGATTGTC
TTGATATCTACCGAGTACA-CAGTGATAAAAGCTAAGTCAGGACGAGTGCACACTTGTGCATACTATAAGCTTCCAACAT
CCAAAGCATATGGTACTGCTTTCATTTGATCGATTTCGTACTGGTTCTTGGGACATTGGAATTTCCCAAAACTGCCGCCC
TTGATTATAGGAAGAGGTGTCGCTTTACTCGCATGCATATTATACTTTTTAAGAACCTTTTCTAAATATACCTTCGGCGA
TAGTTCTAAAACTCCA-TTTTTTCTATCTCGGTGAATGT--CTATACCCAAAACATATGATGCTTCACCAAAATCTACTA
TATCAAAATTTGAGGACAAGAA---CTTTTTTGTCTCTTGTAGCAGACTAACATCACTGCTAGCAAGCAAGATATCATCC
ACATAAGAGATTAGGAAAATATATTTCCCATTTTTGAACTTTGCATAAATGCAGTTGTCCTCAATATTCTCTTTAAATTC
AAAACTTTTAATTGTTTCATTAAACTTTAGATAC
>chr1D_1
TGCTTCATATGCTTTACT-TTTTTTAAAGACAAACTGACTGCAATCTTAAATTTGTTTTTGTAATAG--TTTTAATTATT
TAGCACCTATTTATGCATCTGTTTTATTAGGGTTCCCGGTGCAACGCGCATGGCTTCATCTAGTTGTTTCTTTAATTGTA
ACCCATGCAACCAATCGGCGTCAAAAACAAAAGAAAAGGAAAAGGAGTGAGAACGATAGCTTACACGCATGAAGCTACAA
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TTGCCCCCATCATGCA
GAATACAAAACTCCAACGTAGGTAGTAATTATACC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACATATTTTACGGTTGCACACCCCGAACGA
CAGAAAAGGGTGAGCACATGCATTGCAACAGCAAACAGGGCAGGTTTAGCTTATTTTTCTTTTGATGGAATAGGGCAGGT
ATAGCTAAAAACGTCCACTGGGACAA--------------------------------------GTGGGCAACATGCTGA
TACTACTAG----AAGACTGTTTGTA------------------------------TCTTTGGTCTTAAAAGAGAAGCCC
CTTTGACACTTTGAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGCAAGGGATCGGGTGAGAGACTCATACGTTGACTAGAGAGTTAGG
CACATGGATGTCCACACGGGTGT--GAGCACCCCGGCCGGGGCCGGCAGTACATATATG-------CTCGTTGCTCACGG
TCTGAACGCAC--AGTTCTAGTACAGATCTACAGGAGGACCTAGCTACTCTTGAGCCTTAACCCATGGAGAGACCATCAT
CCCCTTCAAAGGTTCTCCTCGTCTTCCTCCTGCAGTTCCTCCTGCTCTCTGAACCTCTGGAAGCAAGGATACTAGGTGAG
TAGTATACCACATGAATGCATACGCAATTTGTCCATTTTGTACACATGCATGCACGATTTATGGGT-------ATAGTTT
ATGTTCGCAAGCATACACGATTCATGGATATATTTTCTTGGTTTGTTGATTTTCCGTTTGGTACAGGACAGTTTCTCTTA
-TTCTTACCTTTTCCCCACTTCAGGTGATGCATACGACTACAAGAACCTGCTCGCGTTGGGTGTCGATGGAGATGCCGCA
GCGCTGCCCGCATCACAGCTGAACCTCGCCGACGTTGCAGGGAACAGGCGTCC---GTATACGCCGCCTTCTCCGGTGCG
ACCTCCGT---------------------------CGCCGCACCATCTCCACGGAGATGGCGCGCATGAGCAGCAAAGGT
CTCCGCCGGCGCCGTCCTCGACTGAACCTGCACCACCGCGTGATTACAGTCGCCAGCAGGCTGAAGCTGCAGGACACCCA
TCGATGAT---------GCGCGCGTTTCTCCAAGCGATCATGGGATATGTGACGAAAATGTAA---ACCACGCCCGCATA
TGGCCTTTTTTTTCCCGTCAATCTCGTTGAAATTGAATCGTTTCGTGTTAATTTTTCGCATTTTAAAATAGAGCATACAA
GCTTTCAGCTCAAAACCACCCTACCTTAATCATCGTTT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1B_8
-------TATGCTTTACT-GTTTTTAAAGACAAACTTACTGCAATCTTAAATTCG-TTTTGTAATAG--TTTTAATTATT
TAGCACCTATTTATGCATTTGTTTTATTCGGGTTTCCGGTGCAACGCGCATGGCTTCATCTAGTTGTTTCTGAAGTTGTA
ACCCATGCAACCAATCGGCGTCAAAAACAAAAGAA------AAGGAGTGAGAACGATAGCTTACATGCATGAAGCTACAA
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TTGCCCCCATCATGCA
GAATACAAAACTCCAACGTAGGTAGTAATTATACGGACGCGGAGTTTTGGCTCCCGGGCTCATCTGCACCCACGCTCAGC
AAAAAATTAAAAAAAAATACTAGAAAAATTCAAAAAATTCCAATTTTTTTATGGTGGTAGATAATTTGACGCGTGAGGTA
CGCCCCAAAATTCAACTCATTTGAGCACCTGAGCAGCTCTCGGCAAAAAAGACAAAATCAGGGCCTGTAAAAATGTATAC
TGTTCACGCACTGTTTTGACCTGATTTGTCTTTTTTGCCGAGAGCTACTCAGATGTCCAAATAAGTTGAATTTTGGGGCG
CACCTCACGCGTCAAATTATCTACCACCACAAAAAAAAATTGGAATTTTTTAAATTTTTCTAATATTTTTTTTGAATTTT
TTGCTGAGCGGGAGCAGATGAGCCCGGGCTCCAGGATGAATTATCGGTATACATATTCTACGGTTACACACCCCGAACGA
CAGAAAAGGGTGAGCACATGCATTGCAACAGCAAACAGGGCAGGTTTAGCTTATTTTTATTTTGATGGAATAGGGCAGGT
ATAGCTAAAAACGTCCACTGGGACAA--------------------------------------GTGGGCAACATGCTGA
TACTACTAGCTAGAAGACTGTTTGTA------------------------------TCTTTGGTCATAAAAGAGAAGCCC
CTTTGACACTTTGAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGCAAGGGATCGGGTGAGAGACTCATACGTTGACTAGAGAGCTAGG
CACATGGATGTCCACACGGGTGT--GAGCACTCCGGCCT------GCAGTACATATATG-------TTCGTTGCTCACAG
CCTCAACCCAC--AGTTCTAGTACCGATCCACAGGA------AGCTACTCTTAAGCCTTAACCCATGGAGAGATCATCTT
CCCCTTCAAAGGTTCTCCTCGTCTTCCTCCTGCAGTTCCTCCTGCTCTCTGAACCTCTGGAAGCAAGGATACTAGGTGAG
TAGTACT--ACATGAGTGCATACGCAATTTGTCCGTTTTGTACACATGCGTGCATGCACGAT---TTATGGGTATAGTTT
CTGTTCACAAGAATACACGATTCACAGATGTATTTTCTTGGTTTGTTGATTTTCCGTTTGGTACAGGACAATTTCTCTTA
TTTCTTACCTTTTCCCCACTTCAGGTGATGCATACGACCACAAGAACCTGCTCGCGTCGGGTGTCGATGGAGATGCCGCA
CTGCTGCCCGCATCACACCTGAACCTCGCCGATGTTGCAGGGGACAGGCGTCCCAAGTATACGCCGCCTTCTCCGGTGCG
ACCTCCGT---------------------------CGCCGCACCATCTCCACGGAGATGGCGCGCATGAGCAGCAAAGGT
CTCCGCCGGCGTCGTCCTCGACTGAACCTGCACCACTGCGTGATTACAGTCGCCAGCAGGCTGAAGCTGCAGGGCACCCA
CCCATGATGGATGTATCGCGCGCGTTTCTCCAAACGATCATGGGATATGTGACGAAAATGTAA---ACCACGCCCGCATA
TGGCCCTTTTTTTCC-GTGAATCTCGTAGAAATTGAATCGTTTTGTGTGAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1A_237
TGTTGGTTCATTGTGGTTGGTTAGGGTTAGGGATCTACGGTGGAGTACCTTCTCCTTGACTCGAGGAACTCCCGGTGTCG
GCCATGGTGACGGTGGCCGGCGATGGCAGAGAGTAGTGGCGGTGACGGTGCTTCCTGTCGCTACTGCGTGAAACCCTAGA
TCAATGGGTGTATCGGTGGGTGTGCGGCAAAGCGACGAACCTTGTAGTGCGTGCCGCCGGCCCCCACCTTTTTATATAGG
GCAGGTGACAGGGGCCGTCAACCATAGTGGGTTGGGCGCCCCAAGGAGCGGGTCAAAGGGCCAGGTGGGCCGTCGGGCCC
ACACGGGAGGAGATCAACCTAACAGAAAGTCGTAGTCAATGGAGGATTAACAAATTCTGAATTCACGCTATACTAAACGA
CAAAGAGCTATGGCTGGAGTTGCTGAGTAAAAAACACGTCCATTCCAAAACACCATGTAAGCGCATTTTCAACGCCATAC
TAAAAAATGACGACAAGACCTAAAAACTGAAAAAAAAAATAGTCTTTTGGCCCCCCAAAACGGCCCAAACAGCACACCTA
AAACTTTACGGGGATGAAAAATTAAACACCTAAATTTTACTATTGTCTAAAGAAAACCTAAATTTTGCCCCCATCATGCA
GAATACAAAACTCCAACGTAGGTAGTAATTATACC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACATATTCTACGGTTACACACCCCTACGAC
--------------------------------------------------------------------------------
---------------------------------------------------AAAAAATGTGGGGGTGGGCAACATGCTGA
TACTAGTAG-TACAAGACTGTTTGTCTGTTTGTATCCTTGGGGGCCTCGCCAGAGGTCTTTGGTCTTAAAAGAGAAGCTC
ATTTGACACTTTGAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGCAAGGGATCGGGTGAGAGACTCATACGTTGACTAGAGAGTTCGG
CACATGGATGTAGACACGGGTGT--GAGCCCCCCGGCCG------GCAGTACATCTATGATCTATGCTCGTTGCTCACAG
CCTCAACGCAC--CTTTCTAGTACTGATCTACAGGAAGACCTAGCTACTCTCAAGCCTTAACACATGGAGAGATCATCGT
CCCCTTCAAAGGTTCTCCTCGTCTTCCTCCTCCAGTTCCTCCTGCTCTCTGAACCTCTGGAAGCAAGGATACTAGGTGAG
TAGTAGT--ACATGGCTGCATACG-AATTTGTCCATTTTGTGCACATGCATGCATGCACGAT---TTACGGGCATAGTTT
CTGCTCACAAGAATGCAAGATTTT-------------TTGGTTTGTTGATTTTCCGTTTGGTATAGGACAATTTCTCTTA
C-TCTTACCTTTTCTCCACTTCAGGTGATGCATACGACTACAAGCGACTGCTCGCGTCGGGTGTCGATGGAGATGCCGCA
CTGCTGCCCGCATCACACCTGAACCTCGCAGATGTTGCAGGGAACAGGCCTCCCAAGTATACGCCACCGTCGCCGAAGCC
GCGGCCATCGCCGCGTCCGATGCTCGGTTGGCGACCGCCGCACCGGTGCGACGGAGATTGCGCGCAGGAGCAGCAGAGGG
CTCCGCCGGCGTCGTCCTCCACTGAACCTGCACCACCGAGTGATTACAGTCGCCAGCAGGCTGAAGCTGCAGGGCACCCA
CCGATGATGGATGTATCTCGCGCGTTTCTCCAAGCGATCATGGGATATGTGACGAAAATGTAA---ACCACGCCGT-ATA
TGACCTTTTTTC-CC-GTGAATCTCGTAGAAATTGAATCGTTTTGTGTGAATTTTTCGCA--TTAAAATAGAGCATACAA
GCTTTCAACTCAAACCC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr1B_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTCCTGTAT
GTTAGCATGTGGTCCTTCGTGCCTTGCGCATAATGCAATGCTTTCTTTACCATCTTTCAGTGCTCTGTGGCTGGATTTTC
TTGATATCTACCGAGTACCCCGGTGATAAAAGCTAAGTCAGGACGAGCGCACACTTGTGCATACTGTAAACTTCCAACAG
CCGAAGCATATGGTACTGCTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTAAAATTTCCCAAAACTGTCGCGC
TTGACTATAGG-AGAGGTGTGGCTTTACTCGCATGCATATTATACTTTTTAATAACCTTTTCTAAATATGCCTTCTACGA
TAGTCCTAAAACTTCA-TTTTTCCTATCTCGGTGAATTT--CTATGCCCAAAACATATGATGCTTCACCAAGATTTGTTA
TATCAAAATTTGAGGACAAGAA---CTT---TGTTTCTTGTAGCAGACTAACATCACTGCTAGCAAGCAAGATATTATCC
ACATACAAGATTAGGAAAATATATTTTCCATTTTTAGATATTGCATAAATGCAGTTATCCTCAACATTCTCTTTAAATTC
AAACCTTTTAATTGTCTCATTAAACTTTAGATAC
>chr4D_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTTCTGTAT
GTTAGCATGAGGTCCTTCGTGCCTTGCGCATAACACAAAGCTTTCTTTACCATCTTCCAATGCTCTATGCCTGGATTGTC
TTGATATCTACCGAGTACCCCGGTAATAAAAGCTAAATCAGGGCGAGTGCACACTTGTGCAT-CTGTAAGCTTCCAACAG
CCGAAGCATATGGTACTGCTTTCATTTGATCGATCTCATACTGGTTCTTGGGACATTGGAATTTT-CAGAACTGTCGCCC
TTGACTATAGGAGCAGGTGTGGCTTTACTCGCATGCATATTATACTTTTTAAGAACCTTTTCTAAATAGGCCTTCTGCGA
TAATCCTAAAACTCCA-TTTTTCCTATCTCAGTGAATTT--TTATGCCCAAAACATATGATGCTTCACCAATATCTGTTA
TATCAAAATTTGAGGACAATAA---CTTCTTTGTTTCTTGTAGCAGACTAACATCACTGCTAGCAAGCAAGATATCATCC
ATATACAAGATTAGGAAAATATATTTTCCATTTTAAAACTTTGCATAAATGCAGTTGTCCTCAATATTCTTTTTAAATCC
AAAACTTGTAATTGTTTCATTAAACTTTAGATAC
>chr2D_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTCCTATAT
GTTAGCATGAGGTCCTTCATGCCTTGCGCATAACACAATGCTTACTTTACCATCTTCCAGTGCTCTATGCTTGGATTGTC
TTCATATCTATCGAGTACCCCAGTGATAAAAGCTAAGTCATGGCGAGTGCACACTTGTGCATACTGGAAGCTTCCAACAG
CCGAAGCATATGGTACTGCTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTGGAATTTCCCAAAACTGTTGCCC
TTGACTATAGGAGCAGGTGTGGTTTTACTCACATGCAGATTATACTTTTTAAGAACCTTTCCTAAATATGCCTTATGCGA
GAGTCCTAAAACTCCA-TTTTTCCTATCTCGGTTAATTT--CTATGCCCAAAATATATGATGCTTCACCAAGATCTGTTA
TGTCAAAATTTGAGGACAAGAA---CTTCTTTATTTCTTGTAGCAGACTAACATCGCTGCTAGCAAGCAAGATATCATCC
ACATACAAGATTAGGAAAATATATTTCCCATTTTTAAACTTTGCATAAATGCAGTTGCCCTCAATATTCTCTTTAAATCC
AAAACTTTTAATTGTTTCATTAAACTTTAGATAC
>chr5B_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTCCTGTAT
GTTAGCATGTGGTCTTTCGTGCCTTGCGCATAACGCAATGCTTTCTTTACCATCTTCCAGTGCTCTGTGCCTGAATTCTC
TTGATATCTACCGAGTACCACGGTGATAAAAGCTAAGTCAGGGCGAGTGCACACTTGTGCATACTG---ACTTCCAACAG
CCAAAGCATATGGTACTGCTTTCATTTGATCAATCTCGTACTGGTTCTTGGGACATTGCAATTTCCCAAAATTGGCGCCC
TTGACTATGGGAGCAGGTGTGCCTTTACTCGCATGCATATTATACTTTTTAAGAACCTTTTCTAAATATACCTTCTACGA
TAGTCCTAAAACTCCTTTTTTTCCTATCTCGGTGAATTT--CTATGCCCAAGACATATGATGCTTCACCAAGATCTGTTA
TATCAAAATTTAAGGATAATAACTTCTT---TGTTTCTTGTAGTAGACTAACATCACTGCTAGCAAGCAAGATATCATCC
ACATACGAGATTAGGAAAATATATTTCTCATTTTTTAACTTTGCATAAACGCAGTTATCCTCAACATTCTCTTTAAATCC
AAAACTTCTAATTGTTTCATTAAACTTTAGATAC
>chr6D_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGTGAATCAGATTTCCTGTAT
GTTAGCATGTGGTCCTTCGTGCCTTGCGCATAACGCAATGCTTTCTTTACCATCTTCCAGTGCTCTGTGCCTGGATTCTC
TTGATATCTACCGAGTACCCCGGTGATAAAAGCTAAGTCAGGGCGAGTGCACACTTGTGCATACTGTAAACTTCCAACAG
CCGAAGCATATGCTACTGCTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTGGAATTTCCCAAAACTGTCGCCC
TTGACTATAGGAGCAGGTATGGCTTTCCTCGCAAGCATATTATACGTTTTAAGAACCTTTTATAAATATGCCTTCTGTGA
TAGTCCTAAAACTCTA-TTTTTCCTATCTCGGTGAATTT--CTATGCCCAAAACATATGATGCTTCACCAAGATCTGTTA
TATCAAAATTTGAGGACAAGAA---CTTCTTTGTTTCTTGTAGCAAACTAACATCACTGCTAGCAAGCAAGATATCATCC
ACATACAAGATTAGGATAATATATTTCCCATTTTTAAACTTTGCATAAACGCAGTTATCCTCAACATTCTCTTTAAATCC
AAATCTTTTAATTTTCTCATTAAACTTTAGATA-
>chr6D_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTCCTATAT
GTTAGCATGTGGTCCTTCGTGCCTTGCGCATAATGCAATGCTTTCTTTACCATCTTCCAGTGCTCTGTGCCTGGATTCTC
TTGATATCTACCGAGTACCCCGGTGATAAAACCTAAGTCAGGGCGAGTGCACACTTGTGCATACTGTAAACTTCCAACAG
CCGAAGCATATGGTACTGCTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTGGAATTTCCCAAAACTGTCACCC
TTGACTATAGGAGCAGGTGTGGCTTTACTCGCATGTATATTATCCTTTTTAAGAACCTTTTCGAAATATGCCTTCTGCGA
TAGTCCTAAAACTCCA-TTTTTCCTATCTCGGTTAATTT--CTATGCCCAAAACATATAATGCTTCACCAAGAACTTTTA
TATCAAAATTTGAGGACAAGAA---CTTCTTTGTTTCTCATAGCAGACTAACATCACTGCTAGCAAGCAAGATATCATCC
ATATACAAGATTAGGAAAATATATTTCCCATTTTTAAACTTTGCATAAACGCAGTTATCCTCAGCATTCTCTTTAAATCT
AAAACTTTTAATTGTCTCATTAAACTTTAGATAC
>chr7B_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAGATCTCCTATAT
GTTAGCATGAGGTCCTTTATGCCTTGCGCATAACGCAATGCTTTCTTTACCATCTTCCAGTGCTCTGCGCATGGATTTTC
TTGATATCTACCGAGTACCCCGGTGATAAAAGCTAAGTCAGGGTGAGTGCACACATGTGCATACTGTAAACTTCCAATAG
TTGAAGCATATGGTACCGCTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTGGAATTTCCCAAAACTATCGCCC
TTGACTATAGGAGCAGGTGTGGCTTTACTCGCATGCATATTATACTTTTTAAGAACCTTTTCTAAATATGCCTTCTGCGA
TAGTCCTAAAACTCCA-TTTTTCCTATCTCGGTGAATTT--GTATGCCCAAAACATATGATGCTTCACCAAGATCTCCTA
TATCAAAATTTGAGGACAGGAA---CTTCTTTGTTTCTTGCAGCAGACTAACATCACTGCTAGCAAGCAAGATATCGTCC
ACATACAAGATTAGGAAAATATATTTCCCATTTTTAAACGTTGCATAAATGCAGTCGTCCTCAACATTTTCTTTAAATCC
AAAACTTTTAATTGTTTGATTAAACTTTAGATAC
>chr6B_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCTAGGGAATCAAATCTCCTGTAT
GTTAGCATGAGGACCTTCATGCCTTGTGCATAACGCAATGCTTTCTTTACCATCTTCCAGTGCTCTATGCCTAGATTGTT
TTGATATCTACCAAGTATCCCGGTGATAAAATCTAAGTCAGGGCGAGTGCACACTTGTGCACACTATAAACTTCCAACAG
CCGAAGCATATGGTACTGCTTTCATTTGATTGATCTCGTACTGGTTCCTGGGACATTGGAATTTCCCAAAACTATCAGCC
TTGACTATAGGAGCAGGTGTGGCTTTACTCGCATGCATATTATACGTTTTCAGAACCTTTTCTAAATATGCCTTCTGCGA
TAGTCCTAAAACTCCA-TTTTTCCTATCTCGGTGAATTTTTCTATGTCCAAAACATAGGATGCTTCACTAAGATCTATTA
TATCAAAATTTGACGACAAGAA---CTTCTTTGTTTCTTGTAGCAGACTAACATCACTGCTAGCAAGCAAGATATCATCC
ACATACAAGATTAGGAAAATATATT--CCATTTTTAAACTTTGCATAAATGCAGTTGTCCTCAATATTCTCTTTAAATCC
AAAACCTTTTATTGTTTCATTAAACTTTAGATAC
>chr2B_1988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------TAGGGAATCAGATCCTTTGTAT
GTTAGTATGAGGTCCTTCGTGCCTTGCGCATAACGCGATGCTTTCTTTACCATCTTCCAGTGCTCTATGCCTGGATTGTC
TTGGTATCTACAGAGTACCCCGGTGATAAAAGCTAAGTCAGGGCGAGTGCACACTTGTGCATACTGTAAGCTTCCAACAG
CCGAAGCATATGATACAACTTTCATTTGATCGATCTCGTACTGGTTCTTGGGACATTGAAATTTCCCAAAACTATAGCCC
TTGACTGTAGGAGCAGGTGTGGCTTTACTCGCATGCATATTATACTTTTTAAGAACCTTTTCTAAATATGCCTTCTGCGA
GAGTCCTAAAACTCCA-TTTTTCCTACCTCGGTGCATTT--CTATGCCCAAAACATATGATGCTTCACCAAGATCTGTTA
TATCAAAATTTGAGGGAAAGAA---CTTGTTTGTTTCTTGTAGCAGACTAACATCACTGCTAGCAAGTAAGATATCATCC
ACATACATGATTAGGAAAATATATTTCCCATTTTTAAACTTTGCCTAAATGCAGTTGTCCTCAACATTCTCTTTAAATCC
AAAACTTTTAATTGTTTCATTAAACTTTAGATAC
>SNPs
------S--------S---------------------------------------------SSSSS-SS---S--SS---
-------------------------------S------------------S-S---------------------------
---------------S-------------S--------------------------------------------------
---SSSSS-S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-----------------S---------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSS-------SSS-------------------
--------S-----------------------------------S----------------------S---SSSS-SS--
----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
------------------SS--SSS-------------S-------------------S---------------------
-----------SS------S-------------SS--SSSSSSSSSS--SS------------------------S----
---------------------------------------------------------S----------------------
------------------------------------------S-------------------------------S-----
------------------S------------------------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S----S-S-------SS--------SS
---S---S----------------------------S--S-----------------------------------S----
--------------S----------------------------------------S----------------------S-
---------------------------------------------------------------SSS--------------
------------SSSS-------------------S------------S---------------S----------S----
-----------------SSS--SSSS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
---------------------------------------------------------S----------------------
------------------S------------------------------------------------------------S
----------------------------------S---------------------------------------S-----
----S---------------S------------------------------------------------------S----
----S-----------------S--------------S-------S-------------------------S--------
----------------------------S-----S---------------------------------------------
-----S-----------------------------S--------------------------------------------
----------------------------------
>forward_1241
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GACAAGTGGGCAACATGCTG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2801
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGGTGCTTCACGTCACTACT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
