>input_sequence_74673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGGCGGACGTCGAGTACCGCTGCTTCGTCGGCGGCCTCGCCTGGGCCA
CCGACGACCAGTCCCTCCAGAACGCCTTCTCCAAGTACGGCGACGTCATCGACTCCAAGGTACCGTCC---------CCC
TCCCCCGATCCGCCCGA-----------------------------TAGATCTGTGAATTCG-A-----------GATGG
ATCTGTGGTTTTTTGCTTGTGGA------GATCTGACCGGTTTGGTGTGTT--TTGGCG--GTGCAGATCATCACTGACA
GGGAGACGGGCCGTTCCCGCGGGTTCGGGTTCGTCACCTTCGCGTCGGACGAGGCGATGCGCCAGGCGATCGAGGCCATG
AACGGCCAGGACCTGGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGAGGCGGCGGCGGCTT
CA---GCGGCGGAGGCGGTGGCGGCTACGGCGGCCAGCGCCGCGAG------------GGCGGCGGCGGCGGCTACGGCG
GCGGCGGCGGTGGCTACGGAGGTGGCCGCAGCGGCGGCGGCGGTGGCTACGGCAGCCGT---GAGGGCGGCGGCGGCTA-
-----CGGCGGCGGC------------------GGCGGCGGCTACGGCGGCAGCCGCGGCGGCTCCGGCGGCGGCAACTG
GAGGGAGTGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4A_1_TraesCS4A01G293000
CTTTGCCCCGGGCATAAGAACCAAAAGGAAGACAATGCATCCTCTCCATGGACTCTACGACGAGGTGTCATGGAGGCTTC
ACCGTCTCAAGTAGTGCCATCCCCGACGACGACGAGTTTGCGTCCGGATGAAAGATGCGAAGGACCGGATCATAT-TCTC
CATCTGATTGTTGTAGCATCTCTGTAAAAGTGAGG-------TTTCAATTTACAATTTTTCTCTCCGTCCCATAATGTAA
GACGTTCTTTTGACACTACACCAGTGTCAAAA-AACAGCTTACATTATGAGACGGGGGGAGTAGGTATAGTTATCGGTCC
TGAATCAACTAAAAA-AAGTTATCGATCCCGAAGTAAGTTGCTCATTCCACCACTTATTATTAGGCCCTGTTCGGTAGTC
ATCCAGCCCCGGAAGCACGCAGAGCGATATACTTGGGCGACTCGTAGAAAATGGACTGCGTGCCGCTTCGCTCCTGCGCA
GAGCGGAGAGCTACTCCTACCGAACAGCGCCTCAATGCAGCCTTGTGCAAAAAATTATCAGTGTCACA----TATCAAGA
AAGAAAACCGCATTTCACTCCAAGTGTGCACTAG---CCCGAAAATATCTGCCGACGTGCCGCGTGATTGGTCCATA-CC
AGGCCCGCCGCGTCACGACCCGATCGGGGCGGGGTTGGTGGCGGCGCGAGAATCCAAAACCCTAGACGCTCCCCGTCCGA
AAATATCTCCCCG--------CGAGCGAGTCAGG---GGCGACCCAATCGTGCGTGGGCTGGCCCAGAAAGCCAGAACA-
--CTCCTCGAGCCCATCGCGCG---AAAATATCTCGCCCC---------------CCGATCCTTATCCCGCG--------
--GCGCCGTCCGATCCGATCACGACGGCCCGCGCGGCGCCGCGCGCGCTATAAAAGGCGCGGGTAGGGCAACCTTGACTC
CTCGTGCTTTCTCAGGGGTTGGCTTCTCCTCCCCACTCAGTCCTCGGTTCCCGGCC-----CG-----GTTCGGTTCGTT
AGGGTTTAGTAGTGGGGAAGAGGAGGAA-GAATGGCGGACGTCGAGTACCGCTGCTTCGTCGGCGGCCTCGCCTGGGCCA
CCGACGACCAGTCCCTCCAGAACGCCTTCTCCAAGTACGGCGACGTCATCGACTCCAAGGTACCGTCC---------CCC
TCCCCCGATCCGCCCGA-----------------------------TAGATCTGTGAATTCG-A-----------GATGG
ATCTGTGGTTTTTTGCTTGTGGA------GATCTGACCGGTTTGGTGTGTT--TTGGCG--GTGCAGATCATCACTGACA
GGGAGACGGGCCGTTCCCGCGGGTTCGGGTTCGTCACCTTCGCGTCGGACGAGGCGATGCGCCAGGCGATCGAGGCCATG
AACGGCCAGGACCTGGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGAGGCGGCGGCGGCTT
CA---GCGGCGGAGGCGGTGGCGGCTACGGCGGCCAGCGCCGCGAG------------GGCGGCGGCGGCGGCTACGGCG
GCGGCGGCGGTGGCTACGGAGGTGGCCGCAGCGGCGGCGGCGGTGGCTACGGCAGCCGT---GAGGGCGGCGGCGGCTA-
-----CGGCGGCGGC------------------GGCGGCGGCTACGGCGGCAGCCGCGGCGGCTCCGGCGGCGGCAACTG
GAGGGAGTGAATGGTGGGGCCCCTCGCTGGCCAGTTATCCTAGTTACCCGATCCG-TTTTTACCTGTCTACCAAAA-TGT
TATCGCTCGC-TCGCTCCCGAGTATCCTAGATCTCGCTCCGTCGCGTAGGTTCCGAGATGTTCAGGCTACCGTTAGATGT
GACGCTGCTACCGTTCCGTGTTACTG--TTCCGTCCCCGCTCTGTTCGCTATGCTTCTAAGATTGAAATGAAAACCT-GA
GCAAA-GTTTGTTCGCATGTGATGCTTCTCTCGGAAGTTTGTTCC----------TTCTGTTTGTGCCGTGAACGCTTGG
CCTTGCCACTGGGTGATATTTTGCCGCACCCACTAGGTGATACGTATTTTGGTGCAGATTTTGTAGCCCCTGAATTCGAT
TGGCTCGACTGGGACGTGCTCCTCCCTTAAGTTGATGTTCCCCAGTATTGTTTACATTCTCTTCGTTCATGTCTTACGAA
TTAGTTGTTGGAGGTGTCCAGACAAATATAACAAATTTCGGCCTTTGTGTAGAAGAATGAAGCTCCAAGGGAACCAACAC
AATGTACTAATCCG------------------------------------------------------------------
-----------------TGATTTCTAATTGAAGTACTCAATGTAAGGATATTCTGATTCTTCACTCATATGGCAACCCTG
-TTAGTCATCAGTGATCAACATCAGATTCGTCAGATCAACTGTTTGGACCAGGAGCATGCTCCAATAGAAGT---GTTTG
AATACATTGACCTCAAATTTTATTGGGTGCTCAATATC----------------TGAAAATGGACAACTACGACTGTTCC
AGTACGTC-GAGAGCTCAATGTTTACTCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGGGAAGATTCAA
TCTCAGTACCATCTGTGGCATTTTCTAAGTACTGCGAGACGATGCAGGCATAATTGAGGGTAGTCGTTCCCCACTCGAGA
CTGGAATCCACTTGTATACTCTTACTAACACCCACCGTGGCATTT-----------------------------------
----------------------------------------------------TAATCAGGCTATAGCTCATTGCCAAACA
TCCTTGTCCTACCATGGTATTTCAACACTTCAATGCCCACATTCACTCAAGATGGG
>chr4B_1
CTTTGCCCCGGGCACAAGAACCAAAAGGAAGACAATGCATCCTCTCCATGGACTCTACGACGAGGTGTCATAGAGGCTTC
ACCGTCTCAAGTAGTGCCATCCCCGACGACGACGAGTTTGCGTCCGGACGAAAGATGTGAAGGACCCGATCATGTGTCTC
CATCTGATTGTTGGAGCATCTCTGCAAAAGTGAGGCTCCAGTTTGCAATTTACTCCGCCCTTCTTG------TAACGTAA
GACGTTCTTTCGACACTACACTAGTGTCAAAAAAACATCTTACATCATGAGAC--GGGGAGTAGGTCCAGTTATCGGTTC
TGAATCAACTAAAAAAAAGTTATCGGTCCCGAAGTAAGTTGCTCATTCCACCACTTTACTTATTATTAATCCTG------
--------------------------------------------------------------------------------
---------------------------------------GCCTTATTCAAAAAATCATGTTATGTTACATAGTATCAGGA
AAGAAAACCGCATTTCACTCCAAGTGTGCACTA---CCCCGAAAATATCTGCCGACGTGCCGCGTGATTGGTCCACAGCC
AGGCCCGCCGCGTCACGACCCGATCGGGGCGGGGTTGGTGGCGGCGCGAGAATCGAAAACCCTAGACGCTCCCCGTCCGA
AAATATCTCCCCGTGCGCGCGCGAGCGAGTCAGG---GGCGACCCAATCGTGCGTGGGCTGGCCCAGAAAGCCAGAGCA-
--CTCCTCGAGCCCATCGCGCGCAGAAAATATCTC------------------GCCCGATCCTTATCCCGCGGCTCGCCC
GCGCGCCGTCCGATCGGATCTCGACGGCCCGCGCCGCGCCGCGCCCGCTATAAGAGGGGCGGGTAGGGCAACCTTGACTC
CTCGTGCTTTCTCAGGGGTTGGCTTCTCCTCCCCACTCAGTCCTCGGTTCCCGGTC-----CGGTCCCGTTCCGTTCGTT
AGGGTTTAGTAGTAGCGGGGAAGAGGAAGGAATGGCGGACGTCGAGTACCGCTGCTTCGTCGGCGGCCTCGCCTGGGCCA
CCGACGACCAGTCCCTCCAGAACGCCTTCTCCAAGTACGGCGACGTCATCGACTCCAAGGTACCGTCC---------CC-
-TCCCCGATCCGCCCGA-----------------------------TAGATCTGTAGATTCG-A-----------GATGG
ATCTGTGGTGTTGCGCTTGTGGAACCCTAGATCTGACG----------GTT--TTGTTG--GTGCAGATCATCACTGACA
GGGAGACGGGCCGATCCCGCGGGTTCGGGTTCGTCACCTTCGCGTCGGACGAGGCGATGCGCCAGGCGATCGAGGCCATG
AACGGCCAGGACCTGGACGGCCGCAACATCACCGTCAACGAGGCGCAGTCCCGTCGCTCCGGCGGAGGAGGCGGCGGCGG
CTT---CGGCGGCGGCGGTGGCGGCTACGGGGGCCAGCGCCGTGAGGGC---------GGCGGCGGCGGCGGCTACGGCG
GCGGCGGCGGCGGCTACGGAGGTGGCCGCAGCGGCGGCGGCGGCGGCTACGGCAGCCGT---GACGGCGGCGGCTACGGA
------GGCGGCGGC------------------GGCGGCGGCTACGGCGGCAGCCGCGGCGGCTCCGGCGGCGGCAACTG
GAGGGAGTGAATGGTGGGGCCCCTAGCTGGCCAGTTATCCTAGTTACCGATCCCTTTTTTTACCTGTCTACCAAAG-TGT
TATCGCTCGC-TCCCGAGTAC----CCTAGATCTCGCTCCATCGCGTAGGTTCCGAGATGTTCTGGCTACCGTTAGATGT
GACGCCGCTACCGTTCCGTGTTACTTGTTACCGTCCCTGTTCCGTTCGCTATGAA--------TGAAATGAAAAATCAGA
GCAAAAGTTTGTTCGCATGTTATGCTTCCT-------TGGAAGTTTGTTCCTTTTTTCTTTTTGTGCCGTGAAGTTGGC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4D_543
AAGAAAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GAAAACTGCATTTCACTCCAAGTGTGCACTAGTACCCCGGAAATATCTGCCGACGTGCCGCGTGATTGGTCCACA-CC
AGGCCCGGCGCGTCAGGA-CCGATCGGGGCGGGGTTGGTGGCGGCGCGAGAATCGAAAACCCTAGACGCTCCCCGTCCGA
AAATATCTCCCCC----CGCGCGAGCGAGTCAGGAGGGGCGACCCAATCGTGCGTGGGCTGGCCCAGAAAGCCAGAGAGC
CGCTCCTCGAGCCCATCGCGCG---AAAATATCTCGCCCCAGCCAGCCAGATCGCCCGATCCTTATCCCGCGACGCGCCC
GCGCGCCGTCCGATCGGATCACGACGGCCGGCGCGGCGCCGCGCGCGCTATAAAAGGGGCGGGTAGGGCAACCTTGACTC
CTCGTGCTTTCTCAGGGGTTGGCTTCTCCTCCCCACTCAGTCCTCGGTTCCCGGTCCGGTTCGGTTCCGTTCGGTTCGTT
AGGGTTTAGTAG---CGGGGAAGAGGAAGGCATGGCGGACGTCGAGTACCGCTGCTTCGTGGGCGGCCTCGCCTGGGCCA
CCGACGACCAGTCCCTCCAGAACGCCTTCTCCAAGTACGGCGACGTCATCGACTCCAAGGTACCG--ATCCCCCGTCTCC
TCCCCCGATCCGCCCGA-----------------------------TAGATCTCTAAATTCGTA-----------GGTGG
ATCTGTGGTGTTGTGCTTGCGGAACCCTGGATCTGACGGGTTTGGTGTGTT--TTGGCG--GTGCAGATCATCACTGACA
GGGAGACGGGCCGTTCCCGCGGGTTCGGGTTCGTCACCTTCGCGTCGGACGAGGCGATGCGCCAGGCGATCGAGGCCATG
AACGGCCAGGACCTGGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGAGGCGGCGGCGGCTT
CGGCGGCGGCGGCGGCGGCGGCGGCTACGGCGGCCAGCGTCGTGAAGGA---------GGAGGCGGCGGCGGCTACGGCG
GCGGCGGCGGTGGCTACGGAGGTGGCCGCAGCGGCGGCGGCGGTGGCTACGGCAGCCGT---GAGGGCGGCGGCGGCTAC
GGCAGCGGCGGCGGC------------------GGCGGCGGCTACGGCGGCAGCCGCGGCGGCTCCGGCGGCGGCAACTG
GAGGGAGTGAATGGTGGGGCCGCTCGCTGGCCAGTTATCCTAGTTACCGATCC-TTTTTTTACCTGTCTACCAAAAGTGT
TATCGCTCGCCTCCCGAGTAC----CCTAGATCTCGCTCCATCGCGTAGGTTCCGAGATGTTCTGGCTACCGTTAGATGT
GACGCCGCTACCGTTCCGTGTTACCTGTTCCGTCC------CCGTTGGCTATGAA--------TGAAATGAAAAATCAGA
GCAAA-GTTTGTTCGCATATGATGCTTCTCGCGGAAGTGCAAGTTTGTTCC-TTTTTCTGTTTGTGCCGTGAACGCTTTA
CCTTGCCGCTGGATGATATTTTGCTGCACCCACTAGGGCCATG---TTTTGGTGCAGATTCGGTAGCCCCTGAATTCGAT
TGGCACGACCGGGGCGTGCTCCTCCTTGTTA---ATGTTCCCCAGTATTGTTTAAATTCTCTTCGTTCATGTTTCCCGAA
TTTGTTGTTGGATGTATCCAGACGAATCTAACAAATTTTGGCCGGAGGTAATTTGCCTGTGCCATCTTCCGTCCACCCCT
TCCAGATTCAGAGCAAAATGTTAGATTTCTTGCGACACAGGGTTTAATTGATTCGTGTTTGTGCGTGTCTGTTTGTGTTT
TACATAGAGGGCACACATGATTTCTAATTGAAGTATTCAGTATAAGGAT-TTCTGATACTTCAGTCATAGTGCAACCTTG
TTTAGTCATCAGTGATCAACATCAGATTCATCAGATCAACTATTTGGACAAGGAGCATGCTCCAATAGAAGTAGTGTTTG
AATACGTGGACCTCAAAATTTGTTGGGTGCTAAATATCTGGATATGAGATGACTTGAAAATGGACAACTACGACTGGTCC
AGTACGCATGAGAGCTCAACGCTTACTTTAGATGTTTACTTTTGAGAGTAAAACTGAGGGTGGTCGTACTCTTGCCACCG
TCTCCACCGGCCAGCTGCCGGCGTCCCCGGCGTCGACGCCTACACCCTTGACGGGGCCAGGTCAGGTGGCCACTCCCGTG
CGTTCTGGTTGGGGGGGCTGGCTTGGATGCTTCGGAAGGAAGCTCGTGGGGAAACATTGGGAGACTGGCACCGGGCGCCG
CCGCTCGCCATCTTCAAATGCCTTCCGTCGGCCCGGTTCCAATGCTCGGCTGGCTCCGGGATCGATCCTTTCGGTGGCTC
GTCAAAGGTCATCATGCCCGTTCTTGCAGGGACCCAATTCGGTGCACAGGATGCCTTCGTTTCGGCCACAAAGTGCGTTT
TTGTCATGCTCAACACTGCTCCGATCTAACTACGAAGCCGCGTCGTGATGCTGCAACACCTACCCAACCGCCTGCATCGG
AGGTTGATGCAAGACCAGTTGATGTGCAATTGCAACCCATCCTAGCGGAGGAGACCGAGCTACTTCGCACTGAGCTGCGC
GATTGCCTTGCGCGAGTTGGGAGTGTTTTGTGGAGAGCGGAGGCTGCTCTCGCTGAACTAGAGGTTGTGCCGGTTGTGTC
CTCGCTTCCTGAGCTTCAGATTGGGTCTCCTGTTGGGGAGGAAGCAAGCCTCTATGGACATTTCTCCCCTGGTGCTACAT
CATGTTCGCCGATGCCTGTGCTGCTCACTGACCCTGGGTATGTAGTCATCGGTGAGGTCATGGCTCCAGTGCTGCAAATT
ATGCCTGAGCTACAGGAGCGTTGTGGGGAGCCTACTTCACCTCTTTCAATGGTGCTTCCGAAGGAGATGTGATGGGTGGT
GTCTGTGGGTGGCGAGGCTGATGAGGTAGGTGCGATGGCACCTATCTCTGGGGCGCAACTACAGGGTTTGCCTCTGCCAT
GTGTGCAACCGAAGGCGCCTGAGTCCATCGTGTTGGTGGTACCCGTGGCTGAGCATGTTAATGCAGTGGTGTCTGTGAGG
GACAAGGTTGATGAGATTCTATTTGAGATATAGGTCAGCAGCTTACTCACACGTTTGGAGGCGGTCAACCCTGGATCTGG
CAAGATGATTATGGAGAAGGCTCTCAAGAGCAAAACTAAGAAGAGTGGTGCCACAAGAAAGGCGTCTGTAGCTGCTTGAT
GGATGATTATCAGTCTATTGGGCGGTCCATATGGCCTGGCGTGGGTTTGGAGGTGTTTGTGGACTTCGGCGGAGGTGCTC
TCGTTAGGGGTTTCTTTGCGATGTACTCCCTCCGTCCTAAAATGTAAGACATTTTTGAGACTTAGTCTAAGCCTAAAAAA
TGTCTTATATTTCGGGACAAAGGGACTAGTAGTTTGGAGGTTGATGGTCGTTACGTGTTGGGTGTCTTTGTAGGACTGAT
AGTGCGCTTCTGGAGTTGCATGTTTTGTGAGTAGTCCGCATGTTGTTGGTTTGTATCGGTTTTCCGTTAATTAACTGGGC
AATTCTCTTCTGCTTAATTAATCGATGAGGCAAATCTTTTGCCTCCGTTTCAAAAAAAAATTCCTTTTGGGAAGATTCAA
TCCAAGTACTCCTAGTAAA--------------------------------------------------------CGAAA
CTGGAATCCACTTGTATACTCTTACTAACACCCATTGGCATTTTTCCTTGAGAATTTGAGATCATGATTAGTACTCCGTC
CGTCCCATAATATAAGACCATCTAACAAGATATCTGTTTTCAAATTTCCAGCTAATTAGGCTATAGCTCATTGCCAAACA
TCCTTGTTTTACCATGCCATTTCAACATTTCAATGCTCACATTCAC----------
>chr5B_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGGCGGAGACGGAGTACCGCTGCTTCGTGGGCGGCCTCGCCTGGGCCA
CCGACGACAACAACCTCCAGCAGGCCTTCAGCCAGTACGGCGAGATCCTCGACGCCAAGGTAACCCTAACCCCCCTTCCC
CTCCCAGATCCGTTCGAATTTCGCGTCGTCGGCGC-----------TAGATCTGGCCCGATCTGGTGGTTTCTGTGGCGG
ATCTGA--------------------CCGCGTCTGGCGGGTTTTGTTCTGTGCGTGCGTGCGTGCAGATCATCAACGACC
GCGAGACGGGGAGGTCCCGCGGGTTCGGCTTCGTCACGTTCGGCAGCGAGGAGTCGATGCGCCAGGCCATCGAGGAGATG
AACGGCAAGGAGCTCGACGGGCGCAACATCACCGTCAACGAGGCCCAGTCCCGCCGCTCGGGCGGAGGG-----------
-------GGCGGCGGCGGCGGCGGCTACGGCGGCCAGCGCGGCGGTGGCGGAGGCTACGGCGGCGGCGGCGGCTACGGAG
GCGGCGGCGGCGGCTACGGCGGCCAG---------GGCGGTGGCGGCTACGGCGGCCAGCGCGGTGGCGGCGGCGGCTAC
GGCGGCGGCGGCGGCTACG---------GCGGTGGTGGCGGCTACGGCGGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr5D_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGGCGGAGACGGAGTACCGCTGCTTCGTGGGCGGCCTCGCCTGGGCCA
CCGACGACCACAACCTCCAGCAGGCCTTCAGCCAGTACGGCGAGATCCTCGACGCCAAGGTAACC--AACCAACCAA---
CTCCCAGATCCGTTGGAATTTCGCGTCCGATTTGCTGTCCGTGTGGTAGATCTGTCCCGATCTTG-GGTTTGTGTGGTGG
ATCTGA--------------------CCGGATCTGGTGGTTTTTGTGTTTT--GTGCGTGCGTGCAGATCATCAACGACC
GCGAGACGGGCAGGTCCCGTGGCTTCGGCTTCGTCACGTTCGGCAGCGAGGAGTCGATGCGCCAGGCCATCGAGGAGATG
AACGGCAAGGAGCTCGACGGGCGCAACATCACCGTCAACGAGGCCCAGTCCCGCCGGTC---------------------
CGGCGGTGGGGGCGGCGGCGGCGGCTACGGCGGCCAGCGC------------------GGCGGTAGCGGAGGCTACGGCG
GCGGCGGCGGTGGCTACGGCGGCCAG---------GGCGGTGGCGGCTACGGCCAGGGA---GGCGGTGGCGGCTACGGC
CAGGGCGGTGGTGGCTACGGCGGCCAGCGCGGTGGCGGCGGCTACGGCGGCGGCGGCGGCGGCTACGGCGGCGGCGGTGG
TGGCTACGGCGGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>SNPs
--------------S--------------------------------------------------------S--------
------------------------------------------------S--------S--------S------S------
-------------S----------S-------------------S--------SSSSSSSS---SSSSSSSS---S----
----------S----------S---------------S-------S-------SS-----------SS----------S-
-------------------------S------------------------------SSSS-SSSSSSSSSSSS-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S--------S--SSSSSSSSSS---------S--
---------------------------------------------------------------------------S----
------------------------------------------------------S-------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
---------------S-----------------------------------------S----------------------
------------------------------------------------------S-------------------------
-------------S-S-SS--S----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---------S--S------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------SSSS--S-------------------------
-------------S-SSSSSSSSSS---------------S----------------------S----------------
-----S-------------------S---S-------S-S--S----------SSSSSSSSSS-----------SSS---
------------------------------S-------SSSSSSS---------------------------------SS
-------S----S-----------S------------SSSSSSSSS--------------SS------------------
----S----S---S-----------S-SSSSSSS--------------------S-----------------S-SS----
--S---------S--S-------S---S----------S----SSS-SSS-SSS-SS--SSS-SS-SSSS-SS-SSS-SS
SSSSS-S-S-SSSS------------------------------------------------------------------
-----------------------------------S---S-S-------S-------S-----S-----SS------S--
-----------------------------S-----------S-------S------------------------------
-----S-S---------S---S---------S--------------------------------------------S---
------SS-----------S-S-----SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS-----SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-
----------------------------------SS-SSSSS--------------------------------------
--------------------------------------------------------S-----------------------
-------SS-------SS---------S--------S---------SSSSSSSSSS
>forward_401
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TAGGCCCTGTTCGGTAGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_2080
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CCTTGCCACTGGGTGATAT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
