>input_sequence_74652
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-------------------------------------------------------------CTATATAAAGGGTCACCAT
CCGGTCATTAAAAACACAACTCATATCTTTCTCGAGAGCAATATCTCCTGATAGATATTTCTTGTCATCTAGTAAAAAAT
CACTTTAGATCATCTCCACTTTGAGTATGCCCAAGAGAGGGAGGTGGTCTGGTGTGGGGAAGGTTGAGTATGAGGCGAAG
AAGGTAAGGATTGCATTGTTAAAAGAACAGGTAGCCCGGTTAGAGAGAGTGGTTGCGCTGGAGAAAGAGAGAGCAAAAGA
GACCAACCAACGCTTTGAGAAGGCCAAGGAAGAGAGCTCTGGAACTGTGGCCAGGTATCTCTTCATGAATGAAGAGGATC
TTAGCCTTGAGGAGTGCAAGGAGTACTGCCAAGAGCTCATGCGGATCAACCAAGAAATTGCAAATCGATTGTCCTTAGAG
TCCGTGGGCTCAAATGTGCCAGCACTGCAGCTGCACTTGTCTTCAGTCGAATCACAAACTAAGGAAGAAAAGTAGTGAAA
CT--CATACCTAGTCCATATGTGGGTCATGTCCCGTTGTTTGAGATATATTACTTATGTTGTCGTGAGGAAATAATGGGA
AGCCGCTTATTTAGCAATGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr2D_1_TraesCS2D01G529700
TATAGAGCAAAGAGGTGGTGCTGGAGGCGGCCCAGGTGGGAACAACCCACCAGGGCGCGCCTGGGCCCCTAGGCGCGCCC
ATGTGGGTTGTGCTTCCCTCGGAGCCCCCCCTCTGGTACTTCTTTGGCCCAACAGGTATCTTCTAGTCCAGAAAAAATCT
CCAAAAAGTTTCACTGTGTTTGGACTCTGTTTGGTATTGATTTTCTGCGAAGT----AAAAAACAAGAAAAAAACAGCAA
CTAACACTGGGCACT----------------CCCAAAAAATGATATAAAGTTGCTATAAAATGATTGTAAAATATCCAAG
AATGATAATGTAATAGCATGGAACAATCAAAAATTATAGATACGTTGGAGACGTATTAGTTAGTCCCTCAAAAGGATTTT
AAAACATAAAACATTGCATAACTAAAGGATAATATCCAGAAACATACTCATTTACAGATAAATTGGAGATGTACCATTAC
AATGCACGAGATGCTTGGAAATTTTAAAAAGTACTATTGCATCGGTTGGTAAAAGCTAATCTTAAACTATGTTTTATGTG
GCATCTCACTGTTAATAGAATTACAAACATTTGGACATTCTTTCTTACCTAATAATTATAAAGAGTGTGCTCTCAAAAGC
TTGTTAATCTGTCTGTTAACAAGAACATGTAATTAAGCTAGTTTTATGTGGCATCTCACTGTTAATAGAATTACAAACAT
TTGGACATTCTTTCTTACCTAATAATTATAAAGAGTGTACTTTTCTCCATGATTAATTTCAAGTGACCTTATCCGATGAT
CTATGTTTAGCAATTAATTATGACCTTCATTGTCGTGTAGCATATTTTTAGTCAAAAATTGAAATGCTCTAACTGTGTAC
ATATA-TTTCTCTATGATTAATTGGAGGTGTCCTTATCCATTGTCCTATGTTTGGTAAATAATTACAATTGTCGTTGTTG
CGTAGCATATTTTTCTTTAGAGGACATTGATAGACGATTTTACTTTGGACCCCACTTCCATCTATATAAAGGGTCACCAT
CCGGTCATTAAAAACACAACTCATATCTTTCTCGAGAGCAATATCTCCTGATAGATATTTCTTGTCATCTAGTAAAAAAT
CACTTTAGATCATCTCCACTTTGAGTATGCCCAAGAGAGGGAGGTGGTCTGGTGTGGGGAAGGTTGAGTATGAGGCGAAG
AAGGTAAGGATTGCATTGTTAAAAGAACAGGTAGCCCGGTTAGAGAGAGTGGTTGCGCTGGAGAAAGAGAGAGCAAAAGA
GACCAACCAACGCTTTGAGAAGGCCAAGGAAGAGAGCTCTGGAACTGTGGCCAGGTATCTCTTCATGAATGAAGAGGATC
TTAGCCTTGAGGAGTGCAAGGAGTACTGCCAAGAGCTCATGCGGATCAACCAAGAAATTGCAAATCGATTGTCCTTAGAG
TCCGTGGGCTCAAATGTGCCAGCACTGCAGCTGCACTTGTCTTCAGTCGAATCACAAACTAAGGAAGAAAAGTAGTGAAA
CT--CATACCTAGTCCATATGTGGGTCATGTCCCGTTGTTTGAGATATATTACTTATGTTGTCGTGAGGAAATAATGGGA
AGCCGCTTATTTAGCAATGAATAAACTTGTTTGAAGTAATACTTGTCACAAATTGAAATTATCCAAGGAAAGAGTTGTAG
TTTAACAAAGAAGGAAAATATTAAAAAAGGGGATTTCTATTTCTGTGCCCTCGGTTCCTTAGTCGTGCTCAGTTTTTCCC
ATGGCATCTAACTTTTCTCACTTTTCCCCTCCACCACTTGCCCCATTCTCACAAAATCCCAAACGAAGCCTTGTTGTTGT
GTCCAAGCAGTTGACCGTTACCTGCTCGGTTACTGACGCGTCAGGCCGGGGATCTTAAGACAGGTGGGCCATGGCCGTCG
ATTCTAGCAAGAACCGTTCTTACCTATGCAT-TAAACCATAATGGTGTTTCGTCAAGTTTGTTGTTTTAATCTTCTTCAA
GGACCGAT-GCAGTCAAATTCGATTCAACTAAAGTAGGAGAAACAGACA-CCCGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTCTGTCGGTGGAACAGGTCTCATGTGCGTGGAGATGTAAGGTTGGTCCGGGCCACTTCATCCCACAATACCGCCG
AATCAAAA-TAAGATGTTGGTGGTAAGCAGTATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCTCATGATGCCACTGTTGGGAATCGTTGCATGGAAAACAAAAAATATT-CTACGGACACGCAATG
ATCTATCCATGCATATGCATAGCAACAA-GGGGGAGAGTGTGTGTACGTACCCTCGTAGACCGTAAGCGGAAGCATTTAA
CAACGCGGTTGATGTAGTTGAGCTTCTTCTAGCTCCGGCTGATCAAGTACCGAACGTACGACACCTCCGAGTTCTGCACA
CGTTCAGTTCGGTGACGTCCCTTGCCTTCTTGATCCAGCAAGATGTCGAGGTAGTAGATGATTTCCGTCAGCACGATGGT
GTGGTGGCGGTGATGGTGAAGTGATCTCCGCAGGGCTTCGCCTAAGCACTATGAAAATATGACCGG
>chr2B_3
--TAGAGCAAAGAGGCAGTGCGGGAGGCGTATGAGCTGGGAACAACCGACAAGGGCATGCCTGGGCCCCCAAGCGCGCCC
AGGTGGGTAGTGCTCCCCTTTGAGCCCCTG---TGGTACTTCTTTGGCCCAACAGGTGTGTTCTGGTACAGAAAAAATCT
CCAAAAGGTTTCACTGTGTTTGGACTCCATTTGATATTGATTTTTTGTGTGAAGTAAAAAAAACAAGCAAGAAACATCAA
TTAACATTGGGCACTATGTCAATAGGTTAGTCCCAAAAAATGATATGAAGTTGCTATAAAATGATTGTAAAACATCTAAG
AATGATAATATAACAGCATGGAACAATCAAAATTTATAGATGCGTTGGAGACGTATTAGTTAGTCCCTCAAAAAAATTTT
AAAACATAAAAGATTGCATAACTAAGGGATAATATTCAGAAACATACTCATTTATAGATAAATTGGTGATGTACCG----
-ATGCATGAGATGCTTGGAAATTTTAAAAAGTACTATTGCATGGGTTGGTAAAAACTAATCTTAAATTATGTTTTATGTT
GCATCTCACTGTTAATAGAATTACAAACATTTGGAAATTCTTTCTTACCTAATAATTATAAAGAGTGTGCTCTTAAAAGC
TTGTTAATCTGTATGTAATCAAGAACATGTAATTAAGCTAGTTCAATGTTACAAATGTGTACA-----------------
-------------------------------------TACTTTTCTCCATGATTAATTTCAAGTGACCTTATCCAATGAT
CTATGTTTAGCAAATAATTATGACCTTCATTGTCGTGTAGCATATTTTTAGCCAAAAATTGAAATGCTCTAAATGTGTAC
ATAAG-TTTCTCTATGATTAATTGGAGGTGTCCTTATCCATCGTCCTATGTTTGGCAAATAATTACAATTGTCGTTTTTG
TGTAGCATATTTTTCTTTAGAGGACATTGATAGACAATTTTAGTATGGACCCCGCTTCCATCTATATAAAGGGTCACCCT
CCCGTCATTCAAAACACAACCCATATCTTTCCCGAGTGAAATATCTCGAGAAAGATACTTCTTGTCATCTAGTCAAAAAT
CACTATAGATCATCTCCACTTTGAGTATGCCAAAGAGAGGCAGGTGCTCTATTGTGGGGAAGGTTGAGTATGAGGCAAAG
AAGGAAAGGATTGCATGGTTGAAAGAAGAGGTAGCCCGGTTAGAGAGAGTGGTTGCAGCGGAGAAAGAGAGAGCAAAAGA
GACCAACCAACGCTTTGAGAAGGCCAAGGAAGAGAGCTCTGGAACTGTGGCCAGGTATCTCTTCATGAATGAAGAGGATC
TTACACTTGAGGAGTGCAAGGAGTACTGCCAAGAGCTCACGCGGATCAACCAAGAAATTGCAAATCGATTGTCCTTAGAG
TCCATGGGCTCAAATGTGCCACCACCGCAGCCGCATTTGTCTTCAGTCGAATCACAAACTAAGGAAGAAAAGTAGTGAAA
CT--CATACCTAGTCCATATGTGGGTCATGTCCCGTTGTTTGAGATATATTACTTATGTTGTCGTGAGGAAATAATGGAC
ATCTGCTTATTTAGCAATGAATAAACTTGTTTGAAGTAATACTTGTCGCAAATTGAAATTATCCAAGGAAAGAGTTGTAG
TTGAACAAAGAAGGAAAAGATTAAAAAAGGGGATTTCTATTTATGTGCCCTTGGTTCCTTAGTCATGCTTAGTTTTTCCC
AAGGCATCTAAATTTTCTCACTTTTCCCCTCCACCACTTGCCCCATTTTCACAAAAGCCCAAACGGAGCCTTCCTCTCGT
GTCCAAGCAGTTGACCGTTACCTACTCGGTTACTGACGCGTCGGGTCGGAGATCTTAAGACAGGTGAGCCATGGCCATCG
ATTCT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr7D_359
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------GTTAGTCCCTCAAGAAGC-TTT
GTAACAAAAAAATTTGCATAACTAAAGGATAATATCCAGAAACTTACTAATTTATAGATACAT-GGAGATGTATTGGTAC
AATGCACGACATGCTTGGACATTTTAAAAAGTACTATTGCATGGGTTGGTAAAAGTTAATCTTAAATTATCATTTATGTG
G-ATCTCACTATTAACAAAATTACAAACATTTGGACAATCTTTCTTACCTAACAATTAAAAAGAGTGTGTTCTCAAAAGC
TTGTTAACGTGTCTTTAAACAAGAACATGTAATTAAACCAATTCAATGTTGCAAATGTGTGCA-----------------
-------------------------------------TACTTTTCTCCAGTATTAATTTGAAAGGCCCTTATCTGACGAT
CTATGTTTAGCAAATAATTACATCCTTCATTGTCGTGTAGCAT-TTTGTAGCAAAAAATTTAAATGCTCTAAATGTGTAC
ATGCT-TTTCTCTATGATTAATTCGAGGTGTCCTTATCCAGCAACCTATGTTTAGCTAATAATTACAACCTTTGTTGTCG
TGTAGCATATTGTTCTTTAGAGGATATTGATAAGCGGTTTTAGTTTGGACCCCACTTCCATCTATATAAAGGATCACCAT
CCCCTCTTTCAACCCAAG---CATATCTTTCATAAGATCAATATCTCGAGAAAGATACTTCGAGTCATCTAGTCCCAGTC
AC--TTAGATCATATCCACTTTGAGTATGCCAAAGAGCCGAAGGAGGTCGGGTGTGGAGAAGGTCGAGGATGAGGTGAAG
AAGGTAAGGATTGCATTGTTGGAAGAGGAGATGGCCCAGTTAGGGAGAGAGCTTGCGACACAGAAAGAGAGAGCAAAAGT
GACCAACC------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4B_738
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------TACTTTTCTCCATGCTTAATTTCAAGTGACTTTATCCGATGAA
CTTTGTTTAGAAAATAATTAGATCCTTCATTGTCGTGTAGCATATTTTTAGCCAAAAATTGAAATGCTCTAAATGTGTAC
ATACA-TTT-TTTGTGATTAATTTGACGTGTCCTTATCCAACAACCTATGTTTGGAAAATAGTTACAACCTTCATTGTTG
TGTAGCATATT-TCCTTTAGGGGACATTGATTAAAGGTTTTACTTTGGACCCCTCTTCCATCTATATAAAGGGTCACCAT
CCCCTCTTTCAAACCACAACTCATGTCTTTCTCAGGAGCAATATCTAGAGAAAGATACTTCTAGTCATCTGGTCACAAAT
CACTTTAGATCATATCCACTTTGAGTATGACAAAGAGAGGGAGGAGGTCAGGTGTGGGGAAGGTCGAGTATGAGGCGAAG
AAGGTAAGGATTGCGTTGTTGCAAGAGGAGGTAGCCCGGTTAGAAAGAGAGATTGTGGTGGAAAAACAGAGAGCAAAAGA
GACCAACGAACGCTTTGAGAAGGCCAAGGAAGAGAGCTCTGGAACTGTTGCCAGGTATCTCATCATGAATGTAGAGGATC
TTAACCATGAGGAGTGCAAGGAGTACTACCAAGAGCTGATGCGGATCAACCAAGAAATTGAAAATCGGTTGTCCTTAGAG
TCCATGGGATCAAGCATGCCAACCCCACAGCTGCATTTGTCTTCGATGGAATCACAAACAAACGAAGAAAAGTAGTGAAA
CTTCCATACCTAGTCCATATGTGGGCCATGTCTTGTCGTTTGAGATATAGTGCTTATGTTGTAGTGAATAAA-AATGGAC
-ACCACTTATGCTGCAATGAATAAACTTGATTGAAGTAATACTTGTGACAAATTAAATTTATCCATGGAAAGAGTTGTAG
TTGAACAAAGAACTAAAAGATTAAAAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4D_740
--------------------------------------------------------------------------------
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---------------------------------------CTTTTCTCCATGCTTAATTTCAAGTGACTTTATCCGATGAT
CTTTGTTTAGAAAATAATTACATCCCTCATTGTCGTGTAGCATGTTTTTAGCCAAAAATTGAAATGCTTTAAATGTGTAC
ATACATTTT-TCTGTGATTAATTTGACGTGTCCTTATCCAACAACCTATGTTTAGAAAATAATTACAACCTTTGTTGTTG
TGTAGCATATT-TTCTTTAGAGGACATTGATAAAAGGTTTTACTTTGGACCCCACTTCCATCTATATAAAGGGTCGCCAT
CCCCTCTTTCAAACCACAACTCGTGTCTTTCTCAAGAGCAATATCTCGAGAAAGATACTTCTAGTCATCTAGTCACAAAT
CACTTTAGATCATATCCACTTCCAGTATGCCAAAGAGAGGGAGGAGGTCGGGTGTGGGGAAGGTCGAGTATGAGGCGAAG
AAGGTAAGGATTGCATTGTTGCAAGAGGAGGTAGCCTGGTTAGAAAGAGAGATTGTGGTGGAAAAACAGAGAGCAAAAGA
GACCAACGAACGCTTTGAGAAGGCCAAGGAAGAGAGCACTAGAACTGTTGCCAGGTATCTATTCATGAATTTAGAGGATC
TTAACCATGAGGAGTGCAAGGAGTACTACCAAGAGCTTTTGCGGATCAACCAAGAAATTGCAAATCGGTTGTCCTTCGAG
TCCACGGGCTCAAGCATGCCAACCCCGCAGCTGCATTTGTCTTCGGTGGAATCACAAACGAAGGAAGAAAAGTAGTGTAA
CTTCCATACCTAGTCCATATGTGGGCCATGTCCCGTCGATTGAGATATAGTGCTTATGTTGTAGTGAAGAAATAATGGAC
-ACCGCTTATGTTGCAATGAATAAACTTGTTTGATGTAATACTTGTGACAAACTATAATTATCCATGAAAAAAGTTGTAA
CTGAACAAAGAATTAAAAGATTAAAAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4A_740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------CTTTTCTCCATGCTTAATTTCAAGTGACTTTATCCGATGAT
CTTTGTTTAGAAAATAATTACATCCCTCATTGTCGTGTAGCATATTTTTAGCCAAAAATTCAAATGCTTTAAATGTGTAC
ATACATTTT-TCTGTGATTAATTTGATGTGTCCTTATCCAACAACCTATGTTTAGAAAATAATTAAAACCTTTGTTGTTG
TGTAGCATATT-TTCTTTAGAGGACATTGATAAAAGGTTTTGCTTTGGACCCCACTTCCATCTATATAAAGGGTCACCAT
CCCCTCTTTCAAACCATAACTCGTGTCTTCCCCAAGAGCAATATCTCGAGAAGGATACTTCTAGTCATCTAGTCACAAAT
CACTTTAGATCATATCCACTTCCAGTATGCCAAAGAGAGGGAGGAGGTCGGGTGTGGGGAAGGTCGAGTATGAGGCGAAG
AAGGTAAGGATTGCGTTGTTGCAAGAGGAGGTAGCCCGGTTAGAAAGAGAGATTGTGGTGGAAAAACAGAGAGCAAAAGA
GACCAATGAACGCTTTGAGAAGGCCAAGGAAGAGAGCGTTGGAACTGTTTCTAGGTATCTCTTCATGAACATAGAGGATC
TTAACCATGAGGAGTGCAAGGAGTACTACCAAGAGTTGATGCGGATCAACCAAGAAATTGCAAATCGGTTGTCCTTCGAG
TCCACGGGCTCAAGCATGCCAACCCCGCAGCTACATGTGTCTTCAGTGGAATCACAAACGAAGGAAGAAAAGTAGTGAAA
CTTCCATACCTAGTCCATATGTGGGCCATGTCCCGTCATTTGAGATATAGTGCTTATGTTGCAGTGAAGAAATAATGGAC
-GCCGCTTATGTTGCAATGGATAAACTTGTTTGAAGTAATACTTGTGACAAACTAAAATTATCCATAGAAAGAGTTGTAA
TGGAACAAAGAATTAGAATATAAAAAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr2D_1899
--------------------------------------------------------------------------------
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-TTCTAGCAAGAACCGTTCTTACCTACGCAT-CAAACCACAACGGTGTTTCGTCAAGTTTGTTGTTTTAATCTTCTTCAA
GGACCGGCCGCAGTCAAATTCAATTCAACTAAAGTAGGAGAAACAGACA-CCCACCAGCCACCTTTATGCAAAACTAGTT
GCATGTCTGTCGGTGGAACCGGTCACATGTGCGTGGACATGTAAGGTTGGTCCGGGCCGGTTCAACCCACAATACCGCCG
AATCAAAA-TAAGATGTTGGTTGTAAGCAGTATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCTCATGATGCCACTGTTGGGAATCGTTGCATGGAAAACAAAAAAA-AT-ATACGCACACGCAATG
ATATATCCATGGAGATGCATAGCAACGAGGG-GGAGAGTGT--CTACATACCCTCGTAGACCGTAATAGGAAGCGTTTGA
CAACGCGGTTGATGTAGCCGAACTTCTTCTACCTCCGGCCGATCAAGTACCGAACGTACGACACCTCCGAGTTCTGCACA
CGTTCAGCTTGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGATGTCGAGGTAGTAGATGAGTTCCGTCAGCACGACGGC
ATGGTGCCGGTGATGGTGAAGTGATCTCTGCAGGGCTTTGCCTAAGCACTACGAAAATATGACCGG
>chr2D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-TTCTAGCAAGAACCGTTCTTACCTATGCAT-AAAACCACAACGGTGTTTCGTCAAGTTTGCTATTTTAACCTTCTTCAA
GGATCGGCCGTAGTCAAATTCGATTCAACTAAAGTAGGAGAAATAGACA-CCCGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTCTGTCGGTGGAACCGGTCTCATGTGCGTGGACATGTAAGGTTGGTCTGGGCCGCTTCATCTCACAATACCGCCG
AATCAAAAGTAAGACATTGGTGGTAAGAAGTATGACTATCACCGCCCAGAACTCTTTGTGTTCTACTCATGCATATCATC
TATGCATAGACCTGGCTCATGATGCCACTGTTGGGAATCGTTGCATGGAAAACAAAAAAG-TT-CTACGCACACGCGATG
ATCTATCCATGGAGATGCATAGCAACGAGTG-GGAGAGTGTGTCTACGTACCCTCGTAGGCCGTAAGCGGAAGCGTTTAA
CAACGCGGTTTATGTAGTCGAACTTTTTCTAGCTCCGACTGATCAAGTACTGAACGTACGACACCTCCGAGTTCTGCACA
CGTTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGAGGTCGAGGTAGTAGATGAGTTCCGTCAGCACGACGGC
ATGGTGACGGTGATGGTGAAGTGATCCTCGCAGGGCTTC-CCTAAGCACTACGAAAATATGACCGG
>chr5D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACCCACGCAT-AAAACCACAACGGTGTTTCGTCAAGTTTGCTGTTTTAACCTTCTTCAA
GGACCGGTCGTAGTCAAATTTGATTCAACTAAAGTAGGAGAAACAGACA-CCCGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTCTATCGGTGGAACCGGTCTCATGTACGTGGACATGTAAGGTTGGTCCGGGCCGCTTCATCCCACAATACCACCA
AATCAAAA-TAAGACGTTGGTGGTAAGCAGTATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCTCATTATGCCACTGTTGGGAATAGTTTCATGGAAAACAAAAAAA-A--CTACGCACACGCAATG
ATCTATCCATGGTGATGCATAGCAACAA-GG-GGAGAGTGTGTCTACGTACCCTCGTAGACCGTAAGCGGAAGCATTTCA
CAATGCGGTTGATGTAGTTGAACTTTCTTCACGATCCACCGATCGAGTACCGAACGTACGACACCTCCGAGTTCTGCACA
CGTTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCTAGCAAGACGTCGAGGTAGTAGATGAGTTCCGTCAGCACGGCGGC
GTGGTGACGGTGATGGTGAGGTGATCTCCGCAGGGCTTCGCCTAAGCACTACGAAAATATGACCGG
>chr3D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTGCCTACACAT-CAAACCACAACGGTGTTTCGTCAAGTTTGCTGTTTTAACCTTCTTCAA
GGACCGGCCGCAGTCAAATTTGATTCAACTAAAGTAGGAGAAATAGACA-CCTGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTCTGTTGATGGAACCGGTCTCATGTGCGTGGACATGTAAGGTTGGTCCGGGCCGCTTCATCCCACAATACCGCCG
AATCAAAA-TAAGACGTTGGTGGTAAGCAGCATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTCGCTCATGATGCCACTGTTAGGAATCGTTGCATGGAAAACAAAAACA-TTTCTATGCACATGCAATG
ATCTATCCATGGAAATGCATAGCAACGAGGG-G--GAGTGTGTCTACGTACCCTCGTAGACCGTAAGCGGAAGCGATTAA
CAACGCGGTTGATGTAGTCGAACTTCTTCTAGCTCGGACCGATCAAGTACCGAACGTACGACACCTCCGAGTTCTACACA
CGTTCAGCTCGGTGACGTCCCTCACCTTCTT-ATCCAGCAAGACGTCGAGGTAGTAGATGAGTTCCGTCAGCACGACGGC
GTGGTGACGGTGATGGTGAGGTGATCTCCGCAGGGCTTCGCCTAAGCACTACGAAAATATGACCG-
>chr3D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACCTATGCAT-AAAACCACAACGGTGTTTCATCAAGTTTGCTGTTTTAACCTTCTTCAA
GGACCGGCCACAGTCAAATTTGATTCAACTAAAGTAGCATAAACAGACA-CCCGCTAGCCACCTTTATGCAAAACTAGTT
GCATGTCTGTCGGTGGAACCGGTCTCATGTGCGTGGACATGTAAGGTTGGTCCGGGCTGCTTCATCCCACAATATCACCG
AATCAAAA-TAAGACGTTGGTGGTAAGCAGTATGACTATCACCACCCACAACTCTTTGTGTTCTACTCATGCATATCATC
TACGCATAGCTCTGGCTCATGATGCCACTGTTGGGAAACGTAGCATGGAAAACAAAAAAA-A-TCTACGCACACGCAATG
ATCTATCCATGGAGATGCATAGCAACGAGGG-GAAGAGTGTGTATACGTACCCTCGTAGACCGTAAGCGGAAGCGTTTAA
CAACGCGGTTGATGTAGTCGAACTTCTTCTAGCTCCGACCGATCAAGTACCGAACCTACGACACCTCCGAGTTCTGCACA
CGTTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGACGTCGAGGTAGTAGATGAGTTTTGTCAGCACGACGGC
ATGGTGACGGTGATGGTGAAGTGATCTCCCCAGGGCTTTGCCTAAGCACTACGAAAATAAAACCGG
>chr6D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACCTACGGCA-AAAACCATAACGGTGGTTTGTCAAGTTTGTTGTG-TAACCTTCTTCAA
GGACCGGCCGCAGTCAAATTCGATTCAACTAAAGTAGAAGAAACAGACA-CCCGCCAGGCACCTTTATGCAAAACTAGTT
GCATGTCAGTCAATGGAACCGGTCTCATGTGCATGGACATGTAAGGTTAGTCCGGGCCGCTTCATCCCACAATACCGCCG
AATCAAAA-TAAGATGTTGGTGGTAAGCAGTATGACTATCACCGCCCACACCTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCTCATGATGCCACTGTTGGGAATTGTTGCATGGAAAACAAAAAAA-ATTATGCGCACACACAAAG
ATCTATCCATGGAGATGCGTAGCAATGAGGG-GGAGAGTGTGTCTACGTACCCTCATAGACCGTAAGCGGAAGCGTTTAA
CAACGCGGTTGATGTAGTCGAACTTCTTCTAACTCCGACCGATCAAGTACCGAAAGTACGGCACCTCCGAGTTCTGCACA
CGTTCAGTTCGGTGACGTCCCTCGCCTTCTGGATCCAGCAAGACGTCGAGGTAGTATATGAGTTCCGTTAGCACGATGGT
GTGGTGACGGTGATGGTGAAGTGATCTCCGCAGGGCTTCGCCTAAGCACTACGAAAATATGACCGG
>chr1D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACCTACGCAT-AAAACCACAATGGTGTTTCGTCAAGTTTGCTGTTTTAACCTTCTTCAA
GGACCAGCCATAGTCAAATTCGATTCAACTAAAGTAGGAGAAATAGACA-CCCGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTCAGTCGGTGGAACCGGTCTCATGTGTGTGGACATGTAAGGTTGGTCCGAGCCACTTCATCCCACAATACCGCTG
AATCAAAA-TAAGACGTTGGTGGTAAGCAGTATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCCTATGATGCCACTGTTGGGAATCGTTGCATCGAAAATAAAAAAA---TCTACGCACACGCAATG
ATCTATTCATGGAGATGCATAGCAACGAGGG-GGAGAGTGTGTCTACGTACCCTCGTAGACCATAAGCGGAAGCGTTTCA
CAACGCGATTGATGTAGTCGAACTTCTTCGTGCTTCAACCGATCAAGTACCGAACGCACGACACCTCCGCGTCCTACACA
CGTTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGACGTCGAGGTAGTAGATGAGTTCCATCAGCACGACGGT
GTGGTGACGGTGACGGTGAAGTGATCTCCGCAGGGCTTCGCCTAAGCACTATGAAAATATGATCGG
>chr1D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACCTACGCATCAAAACCACAACGGTGTTTCGTCAAGTTTGTTGTTTTAACCTTCTTCAA
GGACAGGCTGTAGTCAAATTCGATTCAACTAAAGTAGGAGAAACAGCCA-C-CGCCAGCCACCTTTATCCAAAACTAGTT
GCATGTCTGTCGGTGGAACCGGTCTCATGTACGTGGACATGTAAGGTTGGTCCAGGCCGCTTCATCTTACAATACCGCCG
AATCAAAA-TAAGACGTTGCTGGTAAGCAGTATGACTATCACCGCCCACAACTCTTTGTGTTCTACTCGTGCATATCATC
TACGCATAGACCTGGCTCATGATGCCACTGTTGGGAAACATAGCATGGAAAGCAAAAAAA-ATTCTACGCACACGCAATG
ATCTATCCATGGAGATGCATAGCAACGAGGG-GGAGAGTGTGTCTACGTACCCTCGTAGACCGAAAGCGGAAGCGTTTGA
CAACGCGGTTGATGTAGTCGAACTTCTTCTAGCTCCGACCGATCAAGTACCGAACGTACGACACCTCCGAGTTCTACACA
C-TTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGTTGTCTAGGTAGTAGATGAGTTCCGTCAGCATGACGGT
GTGGTGACGGTGATGGTGAAGTGATCCGCGCAGGACTTCGCCTAAGCACTACAAACATATGACCG-
>chr7D_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTCTAGCAAGAACCGTTCTTACATACGCAC-AAAACCACAACGGTGTTTCATCAAGTTTGCTGTTTTAACCTTCTTCAA
GGGCCGATCGCAGTCAAATTCGATTCAACTAAAGTAGGAGAAATAGACACC-CGCCAGCCACCTTTATGCAAAACTAGTT
GCATGTATGTCGGTGGAACCGGTCTCATGTACGTGGACATGTAAGGTTGGTCCGGGCCGCTTCATCCCACAATACCACTG
ATTCAAAA-TAAGACGTTGGTGGTAAGCAATATGACTATCACTGCCCACAACTCTTTGTGTTCTACTCTTGCATATCATC
TACGCATAGACCTGGCTCATGATGCCACTGTTGGGAATCGTTGCAGGGAAAACAAAAAAA-ATTCTACACACACGCAATG
ATCTATCCATGGAGATGCATTGCAACGAGGG-GGAGAGTGTGTCTACGTACCCTCATAGACTGTAAGCGGAAGCGTTTAA
CAACGCGGTTGATGTAGTCGAACTTCTTCTAGCTCCGACCGATCATGTACCGAATGTACGACACCTCCGAGTTCTGCACA
CGTTCAGCTCGGTGACGTCCCTCGCCTTCTTGATCCAGCAAGACATCGAGGTAGTAGTTGAGTTCCGTTAGCACGACGGT
GTGGTCACGGTGATGGTGAAGTGATCTCTGCACGGCTTTGCCTAAGCATTATGAAAATATGACCGG
>SNPs
SS-------------SS----S-------SSSS--S-----------S--S-----SS-----------S-S--------
-S------S-----S----SS-------SSSSS------------------------S-S----S--S------------
------S--------------------SS----S----------S--S-SSSS--------------S--S-----S---
S-----S---------------------------------------S-------------------------S---S---
---------S---S------------------S--------S-------------------------------S------
-----------S------------------------------------------S--------------------SS---
------------------------------------------S-----------------------S-------------
--------------------------------------------------------------------------------
----------------S--------------------------SS----S---SS-SSS--SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
-------------S-------------------------------------S--------------------S-------
---S-------------------------------------S-------------S------------------------
S-------------------------------------------------------------------------------
--S------S-------------------------------------SS--S-----S---------------S------
-------------------------------S------------------------------------------------
--------------------S------S-----------------------------S----------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
---S-----------------S---S---------S--------------------------------------------
------------------------------------------------------------------------------SS
--------------------------------------------------------------------------------
--S---------------------------------------S--------S------------S----S----------
-S---------S-----------------------------------S--------S--------S------SS-S-S--
-----------------------S------------------S--S---S----------------S---------S---
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SS--------S----------
-----------S-S-----------------S-----------S------------------------------------
---------------------S----------------------------------------------------------
----------------------S--------------------------------------S------------------
------S-----------------------------------------------------------
>forward_100
--------------------------------------------------------------------------------
ATGTGGGTTGTGCTTCCCTC------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_1723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------CTGTGCCCTCGGTTCCTTAG------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
