>input_sequence_74641
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---------------------------------------------------------------------ATGGCCGAGGA
ACAATCTGGCCCGGCGGCAGCGGACGGGGTGGTGGTGGCGATGAAGGGCCACCCGGGGTCAGGCAAGTCCACGGTGGCTC
GTGCCATCGCCTCCTCGCTCCGATGCCCGCTCCTTGACAAGGACGACGTGCGGGACTGCACCCTGCACCTCGAGCGCGCC
GCCGCCGGCAGCGGCATCCTCAACGACCTCTCCTACGCCGTGCTCTGGAGGTTGGCCGAGAGGCAGCTCCGGCTTGGCCT
GTCCATCGTCGTCGACTCCCCACTGTCGCGCCGAGCCCATCTCGATGCTCTGGCCCGCTTGCCTGCTGCACTTGTTATCA
TTGTGGAATGCCGGCCAGGCAACCAAGATGAATGGCGCCGCAGGCTGGAGGAGCGTGGAGGCGTCTTGGCCGATGATGGA
TGGCATAAGCCCAAGACGTGGGCCGACCTAGAAAGGCTTGTGGAAGGGTACCAAGGATGCACAAACTATGACATTGGGGA
TGTGCCGAGGATCGTTGTGGATACAACGGACCCGACGGTCAGCACCGAGGCAATCGCTGTGAGGGTTGTGGATTTTATTA
GGTCTCTTCTAGCCCGTGCGCATTAG------------------------------------------------------
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>chr2B_1_TraesCS2B01G268600
TTGCTGTAATTTGTGCTGCTGTTGTTGATAAACCACAACAAATTGCAGGTAAATGGGAAAGATTGAAGTCTAGAGGATGG
ACAGGAAAAGGAAGGCAACAAAGGCAAAGAGTCTAAATTTGTAAAAATAATATTTTCCTAATTTGTGATTTGTGTTTAGA
AATAGCTTGACAGTGCAGAATTCAATGATCTTAGTGGCATTTTCACATTATCAATATGGCTTTGCATCATAATTTATTTA
CGCTTTAGAGTTGGCCCCACCTCAAAAAAATTCCGTCCTCCGCCACTGCTTGAAACCATGGACTAAGGGTTCATAGACAG
AGATCCTCGTTGTAACCCTCACTTGAGATCCTTGAGCAAAACCATCTTTATCAACTTCAACTCTGATCACCTCCCCAAGC
CAGTTGCGTGGGGCTCTTCCAAAAGTCTCTC-ATCTCTTATATGAGCGCTTGCGTGTGTAAACAGGGCTGGTAGTTGATG
GAAAAAATAGAATCGCCCCGCTGGTTCACCTACACCTAGGTGATGTGGGCCGGCCCATTTGACGTCCGGTCATTAGTTTG
CCGTTTTTCTTTTCTTGTTACTTGTGATTTCGCTTTAAGAAATGTAT--------------TC---CTCCTCCTCCGGAC
CGAGATCTCCTGTCCTGCCACCG----------TCGAGCACGGCGAGTCACCATCACCTCGTATCGCCGACGTCGGTCAC
CACCGCAAACCAGGTACTGACACTTCGCTCAGCCACAGATTTCC-TATTAATCTCTCGCCTTCTCTGCTCCTTTTGTCGG
ATCTCTCTCTAGATGTTTCTGGACCTTAGATAGATAAGATTGCGACGTTTTTTTGGCTTCTGGCTAAATTAGGGATAAGA
TCAAACTGTTTGCTTGCCCCCGTGTGCTGATTAATTGGAGCCAAGAAACCATTAGAGCGTTGAGGGGGGGTGCGAGCCAG
CAGCGGCCTGATTGTTCCTCGGCCCTTCATCAACTGGGGTTGTTGAATTCTTTAGACAGGGGCCTGCCCATGGCCGAGGA
ACAATCTGGCCCGGCGGCAGCGGACGGGGTGGTGGTGGCGATGAAGGGCCACCCGGGGTCAGGCAAGTCCACGGTGGCTC
GTGCCATCGCCTCCTCGCTCCGATGCCCGCTCCTTGACAAGGACGACGTGCGGGACTGCACCCTGCACCTCGAGCGCGCC
GCCGCCGGCAGCGGCATCCTCAACGACCTCTCCTACGCCGTGCTCTGGAGGTTGGCCGAGAGGCAGCTCCGGCTTGGCCT
GTCCATCGTCGTCGACTCCCCACTGTCGCGCCGAGCCCATCTCGATGCTCTGGCCCGCTTGCCTGCTGCACTTGTTATCA
TTGTGGAATGCCGGCCAGGCAACCAAGATGAATGGCGCCGCAGGCTGGAGGAGCGTGGAGGCGTCTTGGCCGATGATGGA
TGGCATAAGCCCAAGACGTGGGCCGACCTAGAAAGGCTTGTGGAAGGGTACCAAGGATGCACAAACTATGACATTGGGGA
TGTGCCGAGGATCGTTGTGGATACAACGGACCCGACGGTCAGCACCGAGGCAATCGCTGTGAGGGTTGTGGATTTTATTA
GGTCTCTTCTAGCCCGTGCGCATTAGATATGTTATAATAGCTGTTGACCAACGTTTTGGTGAAGACAAGGTTCATATGTT
TTCTGTCAGCAGGAAAATAGAGGATAAGTTAAGTTTCAGATTAGAATTTCATGGCAGAATGTTAAAATGATGTATATTGT
ATTGTATAGGATTGGAAGTGCATGTGTTTAACTTCTTCATCCG------------------CAGCGTTGATGCTTATGCT
CGCCCTCTGTTTATGAGTGTAGCCATTCTCAGTACCTCAAACGTGTTGCAAAATGACCCACCTATGTATTATGTTACTGA
TTTTGAAGCCTTTACTTGATACTTGATACATTTTGCTTCCTTCCCCATCATTAAGGTTACAATGCTAGATCATTACACAA
CACATTGTTTGTTTTCCCCGTAGTGATAGCTGCTTATGTCACAGTGTGTACTTAACATGAACCCTGTAGAAGTCTCTGTA
ATGCATTACTAGGAATTATGAATCTCTTAGGAAATAGTTAACCTGTTATTGTCAATCAAGGTTTGCAGCCATTGATGTCA
CTCATCTTTATTTGGTCCTGGTAACCTAAAAATGATCATATATACATGTACAGTCATAACATTTCAGTGGCTATTTTAGA
AACCAGAATTGATAGCGAGAAATATCGACATTTTTCTCTTACAACTCAGATGTCCTGATTCTGAATGTGTAACATACACT
TTTTTGTTCTGTGGTTTGCTATGGATAAGACGCTGGCACCTTCCAATTTCCATTTCATTCTTGGTAGCCTGTCAAGTGGG
GGCAAGTACAGTAGAAACAACCCTTTTGGTGAATGAATAGAAAATATCAACCTGGATTGTCTGATTGGACCTAGATTGGT
CATTAAGTTTTG-AACTTGTGGGTGTAAGTTTTAAAACTCGCCGGTGCAAGTTTTGTAACTTGCATCTGTGCCATCCATC
TCCGATCTGATGGCCCAAGTTGATCTTTTCTATTCTTGCACCATAAGGTCTGATTCTATTGTAGTCGTCCCCTTTAAGTT
GCACT
>chr2D_289
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------------------------------------------------CTTGAAACCACGAACTAAGGGTTCATGGACAG
AGATCCTCGCCCTAACCCTCGGTTGAGATCCTCGAGCAAAACCATCTTTATCAACATCAACTCTGATCACCTCCCCAAGC
CAGTTGCCTAGGGCTCTTTCAAAAGTCTCTCTATCTCTTATATGAGCGCTTGCGTGTGTAAATAGGGCTGGTAGTTGATG
GAAATAATAGAATCGCCCCGCTGGTTCACCCACGCCTAGGTGATGTGGGCCGGCCCATTTGACGTCCGGTCATTAGTTTG
CCGTTTTTCTTTTCTTGTTACTTGTGATTTCGCTTTAAGAAATGTAGGTCCGTGCTTGTGCTCCTGCTCCTCCTCCGGAC
CGAGATCTCCTGTCCTGCCACCGCCTCCACTCCTCGAGCACGGCGAGTCACCATCACCTCGTATCGCCGACGTCGGTCAC
CACCGCAAACCAGGTACTGACACTTCGCTCAGCCACAGATTTCCGTATTAATCTCTCGCCTTGTCTGCTCCTTTTGTCGG
ATCTCTCCCTAGATGTTTCTGGACCTTAGATAGATAAGATTGCGACGT-TTTTTGGCTTCTGGCTAAATTAGGGATAAGA
TCAAACTGTTTGCTTGCCCCCGTGTGCTGATTAATTGGAGCCAAGAAACCATTAGAGCGTTGAGGGGGGGTGCGAGCCAG
CAGCGGCCTGATTGTTCCTCGGCCCTTCATCAACTGGGGTTGTTGAATTCTTTAGGCAGGGGCCTGCCCATGGCCGAGGA
ACAATCTGGCCCGCCGGCAGCGGACGGGGTGGTGGTGGCGATGAAGGGCCACCCGGGGTCAGGCAAGTCCACGGTGGCTC
GTGCCATCGCCTCCTCGCTCCGATGCCCGCTCCTTGACAAGGACGACGTGCGGGACTGCACCCTGCACCTCGAGCGCGCC
GCCGCCGGCAGCGGCATCCTCAACGACCTCTCCTACGCCGTGCTCTGGAGGTTGGCCGAGAGGCAGCTCCGGCTTGGCCT
GTCCATCGTCGTCGACTCCCCACTGTCGCGCCGAGCCCATCTCGATGCTCTGGCCCGCTTGCCTGCTGCACTTGTTATCA
TTGTGGAATGCCGGCCAGGCAACCAAGATGAATGGCGCCGCAGGCTGGAGGAGCGTGGAGGCGTCTTGGCCGATGATGGA
TGGCATAAGCCCAAGACGTGGGCCGACCTAGAAAGGCTTGTGGAAGGGTACCAAGGATGCACAAACTATGACACTGGGGA
TTTGCCGAGGATCCTTGTGGATACAACGGACCCGACGGTCAGCACCGAGGCAATCGCTGTGAGGGTTGTGGATTTTATTA
GGTCTCTTCTAGCCCGTGCGCATTAGATATGTTATAATAGCTGTCGACCAACGTTTTGGTGAAGACAAGGTTCATATGTT
TTCTGTCAGCAGCAAAATAGAGGATAAGTTAAGTTTCAGATTAGAATTTCATGGCAGAATGTTAAAATGATGTATATTGT
ATTGTATAGGATTGGAAGTGCATGTGTTTAACTTCTTCATCCGTTCCCTCATTTCCTTGCGCAGGGTTGATGCTTATGCT
CGCCCTCTGTTTACGAGTGTAAACGTTCTCAGTACCTCAAACGTGTTGCAAAATGACCCACCTATGTATTATGTTACTGA
TTTTGAAGCCTTTACTTGATACTTGATACATTTTGCTTCCTTCCCCATCATTAAGGTTACAATGCTAGATCATTACACAA
CACATTGTTTGTTTTCCCCGTAGTGATAGCTGCTTATGTCACAGTGTGTACTTAACATGAACCCTGTAGAAGTCTCTGTA
ATGCATTACTAGGAATTATGAATCTCTTAGGAAATAGTTAACCTGTTATTGTCAATCAAGGTTTGCAGCCATTGATGTCA
CTCATCTTTATTTGGTCCTGGTAACCTAAAAATGATCATATATACATGTACGGTCATAACATTTCAGTGGCTATTTTAGA
AACCAGAATTGATAGCGAGAAATATCGTCATTTTTCTCTTACAACTCAGATGTCCTGATTCTGAATGTGTAACATACACT
TTTTTGTTCTGTGGTTTGCTATGGATAAGACGCTGGCAGCTTCCAATTTCCATTTCATTCTTGGTAGCCTGTCAAGTGGG
GGCAAGTACAGTAGAAACAACCCTTTTGGTGAATGAATAGAAAATATCAACCTGGATTGTCTGATTGGACCTAGATTGGT
CATTAAGTTTTGGAACTTGTGGGTGTATGTTTTAAAACTCGCCGGTGCAAGTTTTGTAACTTGCATCTGTGCCATCCATC
TCCGATCTGATGGCCCAAGTTGATCTTTTCTATTCTTGCACCATAAGGTCTGATTCTATTGTAGTCGTCCCCTTTAAGTT
GCACT
>chr2A_479
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-------------------------------------------------------------------------------G
GAAAAAATAGAATCGCCCCGCTGGTTCACCCACGCCTAGGTGATGTGGCCCGGCCCATTTGACGTCCGGTCATTAGTTTG
CTG-TTTTCTTTTCTTGTTACTTGTGATTTCGCTTTAAGAAATGTAGGTGCGTGCTTGTGCTC---CTGCTCCTCCGGAC
CGAGATCTCCTGTCCTGCCACCGCCTCC-----TCGAGCACGGCGAGTCACCATCACCTCATATCGCCGACGTCGGTCAC
CACCGCAAACCAGGTACTGACACTTCGCTCAGCCACATATTTCC-TATTAATCTCTCGCCTTCTCTGCTCCTTTTGTCGG
ATCTCTCCCTAGATGTTTCTGGACCTTAGATAGATAAGATTGCGACGT-TTTTTGGCTTCTGGCTAAATTAGGGATAAGA
TCAAACTGTTTGCTTGTCCCCGTGTGCTGATTAATTGGAGCCAAGAAACCATTAGAGCGTTGAGGGGGA--GCGAGCCAG
CAGCGGCCTGATTGTTCCTCGGCCCTTCATCAACTGGGGTTGTTGAATTCTTTAGGCAGGGGCCTGCCCATGGCCGAGGA
TCAATCTGGCCCGCCGGCAGCGGACGGGGTGGTGGTGGCGATGAAGGGCCATCCGGGGTCAGGCAAGTCTACGGTGGCTC
GTGCCATCGCCTCCGCGCTCCGATGCCCGCTCCTTGACAAGGACGACGTGCGGGACTGCACCCTGCACCTCGAGCACGCT
GCCGCCGGCAGCGGCATCCTCAACGACCTCTCCTACGCCGTGCTCTGGAGGTTGGCCGAGAGGCAGCTCCGGCTTGGCCT
GTCCATCGTCGTCGACTCCCCACTGTCGCGTCGAGCCCATCTCGATGCTCTGGCCCGCTTGCCTGCTGCACTTGTTATCG
TTGTGGAATGCCGGCCAGGCAACCAAGATGAATGGCGCCGCAGGCTGGAGGAGCGTGGAGGTGTCTTGGCCGATGATGGA
TGGCATAAGCCCAAGACGTGGGCCGACCTAGAAAGGCTTGTGGAAGGGTACCAAGGTTGCACAAACTATGACATTGGGGA
TGTGCCGAGGATCGTTGTGGATACAACGGACCCAACGGTCAGCACAGAGGCAATCGCTGTCAGGGTTGTGGATTTTATTA
GGCCTCTTCTAGCCCGTGCGCATTAGATATGTTATAATAGCTGTCCACCAACGTTTTGGTGAAGACAAGGTTCAAATGTT
TTCTGTCAGCAGCAAAATAGAGGATAAGTTAAGTTTCAGATCAGAATTTCATGGCAGAATGTTAAAATGATGTATACTGT
ATTGTATAGGATTGGA---GCATCTGTTTAACTTTTTCATCCGTTCCCTCATTTCCTTGCGCAGCGTTGGTGCTTATGCT
CGCCCTCTGTTTACGAGTGTAGCCGTTCTCAGTACCTCAAACGTGTTGCAAAATGACCCACCTATGTATTATGTTACTGA
TTTTGAAGCCTTTACTTGAGACTTGATACATTTTGCTTCCTTCCCCATCATTCAGGTTACAATGCTAGATCATTACACAA
CACATTGTTTGTTTTCCCCGTAGTGATAGCTGCTTATGTCACGGTGTGTACTTAACATCAACCCTGTAGAAGTCTCTGTA
ATGCATTACTAGGAATTATGAATCTCTTAGGAAATAGTTAACCTGTTATTCTCAATCAAGGTTTGCAACCATTGATATCA
CTCATCTTTATTTGGTCCTGGTAATCTAAAAATGATCATATATACATGTACAGTCATAACATTTCAGTGGCTATTTTAGA
AACCAGAATTGATGGCGAGAAATATCGACATTTTTCTCTTACAACTCAGATGTCCTGATTCTGAATGTGTAACA--CACT
TTTTTGTTCTGTGGTTTGCTATGGATAAGACGCTGGCAGCTTTCAATTTCCATTTCATTATTGGTAGCCTGTCAAGTGGG
GGCAAGTACAGTAGAAACAACCCTTTTGGTGACTGAATAGAAAAAATCAACCTGGATTGTCTGATTGGACCTAGATTGGT
CATTAAGTTTTGGAACTTGTGGGTGTAAGTTTTAAAACTCGACGGTGCAAGTTTTGTAACTTGCATCTGTGCCATCCATC
TCTGATCTGATGGCCCAAGTTGATCTTTTCTATTCTTGCACCATAAGGTCTGATTCTATTGTAGTCGTCCCCTTTAAGTT
GCACT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-S-------------S-----
---------SSS--------SS----------S----------------------S------------------------
-------S-S--------S-------------------------------------------S-----------------
------------------------------S--S----------------------------------------------
----------------------------------------------S---------------------------------
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-------S----------------------------------------S-------------------------------
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-------------------------------------------------------S------------------------
-------------S------------------------------------------------------------------
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--------------------------------------------S-----------------------------------
------------S-------------------------------------------------------------------
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-------------S----------S-------------------------------------------------------
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--------------------------------------S-----------------------------------------
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>forward_268
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--------AGTTGGCCCCACCTCAAAAA----------------------------------------------------
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>reverse_1854
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-------------TGAGTGTAGCCATTCTCAGTACC--------------------------------------------
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