>input_sequence_74627
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---------------------------------------------------------ATGGCTGTCAAGGTCGTCGCCGG
GAAGACCCCTGCCGCTCAGCCCAAGAGCGTGGGGCGGCGGCTGTGGCGCCTGGCGCGCACCGTCGTCTACCTTCTGCGCC
GCGGCGCGCTGTCGTCCGGGCGTAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGCCGGCTTC
GCCAACTTCCACCGCCGCGGCGCGGCTCGCTCTTGCTCCTCCT---TCGTCGCAGCGAAGCACCGTGACGACGAAACCGC
CGGCTGTTACAACAGCTACGACGCGGCAGACATCGCGAGGGCGTTCGAGATGCTCAACGACGGCGGGCGGCACCTCTTCG
ACGACGAGGATGGGGGGCTCGCGGCGGCGACGTCCTCTCCCGCCGCGTGGGCGTCGCCGGCCTTCGGGCGCAGC---GCG
GCTACGGGCCAGCTGCGCATCATCGACTCGCCGTTCACGGCGGGCGAGCACCAGCAGGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCAGCAACTGCGTGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAGCCGCGGCCA---CGTCCCAA
GGCTGGTCGCCGCTCAATTTTAG---------------------------------------------------------
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>chr1A_1_TraesCS1A01G414200
CTAAT---------------------------------------------------------------------------
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------CTCTACTTCTTCTAAATTCGGATAACAATCTATTG---------------------------------------
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------------------------------------------AGCACTTGACACCAAACTTTCTGCACATGAGTTTTGTA
CTTTGTAGCACCGACCTCTTACGTGTAGATGAAATTAGGTGTGGTGCTACGTACCATATTTTTCTATGTGCTACGTGGAT
CATGCAAAGTGCTCTTATTTTGGCAACAAGTGTCCTTTATCCG-----AACAAAGAAGAAAAGAGAAGGACGTGGCCCTG
GTCTATCCAAA-----GCAGATTAAGACACCAATGATTGTGTTTTTTTTTTTGTTTTTAACCAATAATTGTGTTTC----
------------TTTTTGTTTTT------------------------------AATCAATAATCGTGTTACCATGTATA-
----CTTTATA----AGCACGTAGATTCAGGTGGGGATTCTCTTCCCCCTGTGATTGTTTAAACAAATATAAGCACGTAT
AACTG-T-TAGTTTGATGAA---ATTGTTCTTGCTTTTTTTTTT--TGAAAAATA---TAATACAGACCCTCACAACACG
TATGCAAACTTACTCCCTGTGA-------ATAATACA----------------------GTCCCATCTTCGTTAAAGTTG
AACTCAGCAG-ACTGTCATTTTTTCC------------------------AGAGTGACC--TATGCCGCACTGCACCGAC
GGCA----CGAGCATCATCAGCA-------------AATACTGGAGACAACTCCAAGTCCTTCTCCGAGACGT--TGAGA
ACATCCGCATC----------------------------CATATCCATGCAGACACTGAAAACCTGGGA-----------
TTGCACT--AATCTCCCATATTATTATTTTTACCCCAATCATGCAACCTTAAAAAGGAAGAGAAAAAA-GCACTCCAATC
AGTCAGGTTGGTGCTC-------------CATATCCTTGGCCAA------CCACGACCAATAATGTAAGCCACCAGCCCT
CGTTTCAGACCCAGCCCGGCACGCGACGACACACAAGACAG---------AGCCCTCGCTCCTTCAAATAC---C-----
TGACATCCCTATCC------TATCGACCAAGAG---------CGAGAGTGAGTGACAGCATCGTTAGTACCTATCGAACG
ACCAAGAGCGAGACGAGAGTGAGTGACACCGCCTA--TCGGTTGC----------AAATGGCTGTCAAGGTCGTCGCCGG
GAAGACCCCTGCCGCTCAGCCCAAGAGCGTGGGGCGGCGGCTGTGGCGCCTGGCGCGCACCGTCGTCTACCTTCTGCGCC
GCGGCGCGCTGTCGTCCGGGCGTAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGCCGGCTTC
GCCAACTTCCACCGCCGCGGCGCGGCTCGCTCTTGCTCCTCCT---TCGTCGCAGCGAAGCACCGTGACGACGAAACCGC
CGGCTGTTACAACAGCTACGACGCGGCAGACATCGCGAGGGCGTTCGAGATGCTCAACGACGGCGGGCGGCACCTCTTCG
ACGACGAGGATGGGGGGCTCGCGGCGGCGACGTCCTCTCCCGCCGCGTGGGCGTCGCCGGCCTTCGGGCGCAGC---GCG
GCTACGGGCCAGCTGCGCATCATCGACTCGCCGTTCACGGCGGGCGAGCACCAGCAGGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCAGCAACTGCGTGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAGCCGCGGCCA---CGTCCCAA
GGCTGGTCGCCGCTCAATTTTAGAAATATTAGC---GATGGACTGCTCGAGGCGGCCGCC---GGTCGCCCGGCACGGGG
AGCACAACGCTGCCATGTCTTCATCTTCAGACAAC---GTAAATCATCCACATGACCACATCCTCTGTAAACGACTAAAC
GTGAAACATTGTGCAATTTGAATTGTG--------GTGGTACGCTTGTATTGCTGTGTCGCTTTGGCTATCTGTCGTCCG
GGGACTGTCA------------GTGACCCGGGTGAAAGCAGGCTACATCTACAGCTGTG--------GGTACATAGAAAG
AAAGCATGGGAGGAGCTGGAAAATACATGGTTGAACCCGGCACTTCAG--------------------------------
-AAAATATTCTGAGAAACAGTTCCACCCGTGCAGCTCCACAT-------------------------TGAAAAACAACAT
TTTCTTTTGGCCCGCGCAAACAA-GACCACAAAAATGTGTCGTGAAACGCTATTTAGAAGCACTGAAAATTGTCTTTTTT
GAGGAGGCAAAAGAAAAAGGCATTTTTCTCGCAAAATTTTGTGTCGCACACATATTTT----------------------
---GTTTTGAAAATTTACATGTTTTAAAACATGTTTAAAATGCCTTTTTGAAAAGTGGGTTCATACGTACCAGGTTTCAA
AGATGTTCAGTTCAGATACAAACTTACGTCGACTACAAACTACT----------GCAAACTACTAAGAGATTGTCCCAGT
CAATGTCG----------------------------GAGCTCAATCACCCTTGAGGGACCAGCC---TCGTCGTCCTCCA
CCTTCTTCTTTTCCTTCCTCACCCCCTTCTTCACCGGCTTGTCTCGATGCACCGAGTACTCATACTCCTCCAACGCGAGG
TGCATATTTTCCGCCCTAAACCTCGCCATGGTAACCTCATCCCACCGATGAATGTCGCATTGATCCAAGATGACCCGAGT
CTCTGATGCATCTCCAATGTATCTATAA--TTTTTTATTGTTTCATGCTATTATATTATCAATC-TT-AGATACTTTATA
TGTAATTT-ATATCATTTTAACTAACCTA--------GTGCTTAGTGTCAGTTGTTGTTTTCTGCTTGTTTTTTGTAT
>chr1A_1
CTAAT---------------------------------------------------------------------------
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------CTCTACTTGTCGTAAATTTTGATAACAATCTATTG---------------------------------------
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------------------------------------------AGCACTTGACACCAAACTTTCGGCACATGAGTTTTGTA
CTTTCTAGCACCGACCTCTTACGTGTAGATGAAATTAGGTGCGGTGC----TACCATGTTTTTCTGTGTGCTACGTGGAT
CTTGCAAAGCGCTCTTATTTTGGCAGCAAGTGTCCTTTATCCATCCATAACGAAAAAGAAAAGAAAAGGACGTGGCCCTG
GCCTATCCAAA-----GCAGATTAAGACACCAATAATTGTGGTTTTTTTCTTTCT-------------------------
------------TTTTTTGTTTT------------------------------AACCAATAATTGTGTTACCATGTATA-
----CGTGGTA-----------------------------------------------------------------GAGT
AGTTGTTATAGTTGGATGAA---ACTGTTCTTGCCTTTAAA-------AAAAATA---TAATACAACCGCTCATAACACA
CACACGCACTCACCCCTTATGA-------ACACACGGCCTTCTTCCGACCGATGCCCATGTCTCATCTTGATTAAAGTTG
AACTAAGAAG-ACTATCATTTTTTTTTCAGAGTACAAGCAAGTATAGCCTAGAGTGACCTATATGCCGCACTGCACCAAC
AGCA----CGAGCGTCAGCACGGGTGCGTCGACATCGATACTCGACACAACTAACAACTAGTATATCCATG-----CAGA
ACATCGACATC----------------------------CATATCCATGCAGACACTGCAAACCTGGGG-----------
TTTGCACTGTATCTCCCATATTATTATTGT-AATCCAATCATGCAACCTC------------AAAAGA-GTACTCCAATC
AGGCAAGTTGGTGAGCCAA-AAAAGGGTGCATATCCTTGGCCTA------CCACAACCAATAATGGAAGCCACCATCCCT
CATTTCAGACCCAGCCCGACACGCGACGACACGGAAGACAG---------AACCCTCGCTCCTTCAAATAC---C-----
TGACACCCCTATCC------TATCCAACGACCAAGACCCAGACGAGAGTGAGTGATAGCACCGTTAGTACCCATCCAACG
ACCAAGAGCGAGATGATAGTGAGTGACACTAAGCTCCACTTGCTACCTACTTGGAAAATGGCAGGCAAGGTCGTCTCCGG
GAAGACCACTGCTGCCCAGCCCAAGAGCGTGGGGCGGCGGCTGTGGCGCTTGGCGCGCACCGTCGTCTACCTTCTGCGCC
GCGGCGTGCTCTTGTCCGGGCGCAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGGCGGCTTC
GTCAACTTCCAGCGCCGCCCGGCGGCTCGCACTCACTCAACCT---CCGTCGCAGCGAAGCGCCGTGACGACGAAACCGC
CGGCTATTGCAACAGCTACGACGCGGCCGACATCGCCAGG-TGTTCGAGATGCTCAACGACGGCGGGC---ACCTCTTCG
ACGACGAGGACGGGGGTCT------------------------CGCGTGGGCGTCGCCGGCCTTCGGGCGCAGC---GCG
GCTACGGGCCAGCCGCGCATCACCGACTCGCTGTTCACGGCGAGCCAGGACCAGCAGGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCAGCAACTGCGCGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAACTACGGCCACGTCGTCCCAA
GGCCGGTCGCCGCTTAATTTTAGAATTATGAGT---GCTGGACTGCTCGAGGCGGCCGCC---GGTCGCCCGGCAGCGGG
AGCACAACGTTGCCATGTCTTCTTCTTCAGAAAAT---GTAGTAAATCAC-----CCGCATAATGTGTAAACGACTAAAC
GTAAAACATTCTCCGTTTTGAATTGTG--------GTGGTACGCTTGTATTGCTGTGTCGCTTTGGCTATCTGTCGT---
-------TCA------------G-GACCCGGGTGAAAGCAGGCACCAACTACAGCTGTG--------GG-----------
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>chr1D_1
CTAAT---------------------------------------------------------------------------
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------CTCTTCTTCTCCTAAATTTGGATAACAATCTATTG---------------------------------------
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------------------------------------------AGCACTTGAAACCAAACTTTCTGCACATGAGATTTGTA
CTTTGTAGCACCGACCTCT-----GTAGATAAAATTAGGTGTGGTGCTACGTACCATATTTTTCTATGTGCTACGTGGAT
CATGCAAAGCGCTCTTATTTTGGCAACTAGTGTCCTTTATCCA-----AACAAAAAAGAAAAGAGAAGGACGTGGCCCTG
GCCTATCCAAA-----GCAGATTAAGACACCAATAATTGTGGTTTTTT----GTTTTTAACCAATAATTATGTTTTTTAA
CCAATAATTGTGTTTTTGTTTTT------------------------------AATCAATAATTGTGTTACCATGTATA-
----CTTTATATATAAGCACGTAGATTCAGGCGGGGATCCTC-TCCCCCGGTGATTGTTTAAAAAAATATAAGCACGTAG
--CTG-T-TAGTTGGATGAA---ATTGTTCTTGCCTCTTTTTTT--T-ATAAATA---TAATACAGACCGTCACTACACG
AATGCAAACTCACCCCTTATGA-------ATACACGGCATTCTTCTGACGGATGCGCATGTCTCATCTTCGTTAAAGTTG
AACTCAGCAATACTGTCA--TTTTTTCCGTAGTACGAGCAAGTATGGCCTAGAGTGACC--TATGCCGCACTGCACCAAC
GGGACGATCGAGCATCATCAGCA-------------AATACTGGAGACAACTCCAATTCCTTCTCCGAGATGT--TGAGA
ACATCAACATC-------------------------------------GCAGACACCGAAAACCTGGGG-----------
TTGCACT--TATCTCCCATATTATTATTTT-ACTCTAATCATGCAACCTTAAAAAGGAAGAAAAAAAA-GTACTCCAATC
AGGCAGGTTGGTGCTC-------------CATATCCTTCGCCAACCACGACCACGACCAATAATGAAAGCCACCATCCCT
CGTTTCAGACCCAGCCCGACACGCGACGACACAGAAGACAGAGGTCACAGAGCCCTCGCTCCTTCAAATAC---C-----
TGACATCCCTATCC------TATCCAACGACCAAGAGCCAGACGAGAGTGAGTGACAGTATCGTTAGTACCTACCCAGCG
ACCAAGAGCGAG-----------TGACAGTAAGCTCCACTTGCTACCCACCTGGAAAATGGCCGTCAAGGTCGTCGCCGG
GAAGACCACTGCTGCTCAGCCCAAGACCGTGGGGCGGCGGCTGTGGCGCTTGGCGCGCACCGTCGTCTACCTTCTGCGCC
GCGGCGTGCTGTCGTCCGGGCGTAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGGCGGCTTC
GTCAACTTCCACCGCCGCGCGGCGGCGCGCTCTCGCTCCTCCT---CCGTCGCTGCAAAGTGCCTTGACGACGAAGCCGC
CGGCTGTTACAACAGCTACGACGCGGCAGACATCGCGAGGGTGTTCGAGATGCTCAACGACAGCGGGC---ACCTCTTCC
ACGACGAGGACGGG---CTCGCGGCGGCGACACCTTCTTCCGCCGCGTGGGCGTCGCCGGCCTTCGGGCGCAGC---GCG
GCTACGGGCCAGCTGCGCATCATCGACTCACCGTTCACGGCGGGCGAGCACCAGCAAGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCAGCAACTGCGCGCACAGAAGAGCGTCTCCGCCACGCCGGAAAACTACGGCCACG---TCCCAA
GGCCGGTCGCCGCTTGATTTTAGAATT---AGT---GCTGGACTGCTCGAGGCGGCCGCC---GGTCGCCCGGCAGGGCG
AGCACAACGTTGCCATGTCTTCACCTTCAGAAAAC---ATAAATCATCCACATGACCACATCCTCTGTAAACGACTAAAC
GTGAAACATTGTGCAATTTCAATTGTGATGGTTACGTGGTTCGCTTGTATTGCTGTGTCGCTTTGGCTATGTGTCGTCCG
GGGACTGTCA------------G-GACCCGGGTGAAAGCAGGCTACATCTACAGCTGTGCCGCTGTGGGTGCATAGAAAG
AAAGCACGGGAGGAGCCGGAAAATACATGGATGAA----------------CCCACTTCAGAAAACACATTTCTAATTGC
CAAAATATTCTAAAAAACAGTTCAGGA--TACAGCTCCACATTGTGTGTGTGCACCGAAAGTTTCGCTGAAAAACAACAT
TTTCTTTTGGCCCGTGCAAAAAAAGACA--AAAAAAGTGTTGTGGAATGCTATTTAAAAGCACTAAAAATTGTTTTTTTT
GTGGAGGCAAAAGAAAAGGGCA-ACTTTTCACAAAATTTTGTGTCGCCG------------GAGAAGGTAGATGTAAAAT
TTTGTTTTGAAAA-ATTCATGTTTTAAAACATGTTTAAAATGGCTTTTTGAAAAGCGGGTTCATATGTACCCGGTTTCAA
AGATGTTCAGTTCGGATACAAACTTACTTCG----------ACTA----------CAAACTACTCAGAGATTGTCCCAGT
CAATGTCG----------------------------GAGCTCGATCACCCTTGAGGGACCAGCC---TCATCCTCCTCCT
CCTCCTTATTCTCCTTCCTCGCCCCCTTCTTCACCGGCTTGTCCCGATGCACCCAGTACTCATACTCCTCCATTGCGAGG
TTCATATTTTCTGTCGTAAACCTCGCCATGGTAGCCTCATCCCACCGATGAATGTTGCACTAATCCAAGATGACCTGAGT
CTCTGATACGTCTCCAACGTGTCTATAATTTTTTTTATTGTTTCATGCTATTATATTATCAATC-TTTAGATACTTTATA
TGCAATTTTATATCATTTGAACTAACCTATTAACCTAGTGCCTAGTGCCAGTTGTTGTTTTCTACTTATTTTTTTTAT
>chr1D_1
CGTCTCCGCCACGCTGGAAAACTACGGGCACGTACCAAGGCCGGTCGCCGCTTAATTGTAGAATAGTGCTGGACTGCTCG
AGGCGGCCGCCGGTCGCCCGGCAGGGGGAGCAGAGCACAACGTTGCCATGCCTTCATCTTCAGAAAATATAAATCATCCA
CATCCTCTGTAAACGTAAAACATTGTGCAATTTGAATTGTGGTGGTACGCTTGTATTGCTGCTTTGGCTATCTGCTGTTC
GGGGACAGCCAGGACTCGGGTGAAAGTAGGCACCAGCTACCGCTTGAATTGGATGAATTTCATCATAAGAAAAAAAAAGG
AATTTGTTCATAGTAAATTGGGTGTCATATTATTTTTTAGCTGAAGGATGGTCGTAGCGGCGGCTCAAGCTCTGCCTCTG
CCACACACACTATTGGGCTGCCCCGACGGAGGAGTGGCAGATCTGGTCGAGAATGGCGCTTCTCCCATGGTCAGCGCCTC
TCACGCTCGTTCTCCAATCATGACGAGCAAAACACGTAACGTAGCCCAATCCATGCAATATTTTTCTCTCTCCATGCACT
TAATTAATTCATAGGAGGTAAAGTCTGTGTCTCAAACGAACTCGATTATCAGCCAATACTAGCAAGATGCCCGTGCATTG
CACGGAACATCAAGATGCATTTTTTTTTACAAAACACCTGTTGTGATTGACCCATGTAGGAGTAATCCCTCAAATGCTCG
CGGACGCGATTGGGCGCGTACACGTACAGTGAACGGTCACGCATCAAATAAAGCACTCTGCATCCGAGTCTCTCGTATTT
GAACCCATAGATCCATACAAAGCCTGCAAAAGAATCCTACGTACTACCCTAGCCAATCTTCGTCATCGGAGATGTCCGCG
ATGTCGTTGTCGGGCGCCGGGTGGACGAGCGCGTAGGAGGGCTCCTGCTCATCCTCCTCCCGCTCGACCTCATCCATGTA
GGCGAGCATCTCCTTCTCCTCCGCGGCCTATTGCGCCTCCATCTCCTGCCCAGTGACGGCGCCTGGCCTCCGCAGCCGAC
TCCAAGCGGAGAGAATCAAGGATGGTCTGCTGCTCCGCTTGCAGATCCGCGTCGCTAGCGTCCCCCACATCTTCCTCCTC
CTCCAACTCCTCCTTCGTATCCACTGCATCAGGAGGTAGCCCCGGCGATTTGGGCTTCCCGCCTTGCCCGGATCTGCTCA
AGTAGCTGCAGCCGGCGCTCCAGTGTTAGAAATAGGACCTCCTCATCCGGCAGCGTGGGGGGCATGGCTACTAGTGGTGG
TGGATGGGGAGTGGAAAGTGGCGGTGGCAGCGGACATGCGGAGGAAAATGTGGAGGGGTAGGGTTTCGGTGCCTACGGTC
GGCTTAAATAGTTGAGTTATGCACTACACGGCTCGCCGGAGCGGCGCCATGCGGCGACAACGGTCTGACGGGGGAGATGA
GTTTCGGACCGCCGTGTTTCCCTGCGATTCCGCATGGGACCCTGCCATCAGTCCGACGTGGCGGACGCGCCTGGGCGCCC
CCATATTCGGCCCATATTTAGGCTGGATATGAGGGGTGGCGGTCAGCCCAGGCGTTTGAGGCCCGTTTGGGGCGCCTGTC
TGGGTCGAAATTTCGTGACCGGTCATTGACTGGGCGGGCCGCCCTGGCATTTGAGGCAGATTTGGGGGCCCCGGCTGTAG
ATGCTCTAACATTACCGCCCCAAGAAGACGGTAGGAATCTACGCCAGAGCTCCGTCAAAGATGGACGAACTCGGGGAGGA
TTGGGACCCGAAAGACAAATTCAAAGAAGAAATGTCATCACACATACAAACGCCGCACATGCGAGGACAAAAGAAAAAAA
AACTAACCTATAAAGTACTAACCAGAGCAGAGGCACCGGAATTCTGCTCCCCGTCACCGGCCGTCGGAGGGGCAGAGAGA
GGGAAGACGAATCGATGGGCTCATTGGTGAAGCCTAGAGGAAAGAGTTTGTTCTAGCGGTCAAGTGATGAGAAAGAAAAA
CCTAATCTCTACTTTTCGTAAATTTTGATAACAATCTATTG---------------------------------------
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------------------------------------------AGCACTTGACACCAAACTTTCTGCACATGAGTTTTGTA
CTTTGTAGCACCGACCTCTTACGTGTAGATGAAATTAGGTGTGGTGC----TACCATGTTTTTCTATGTGCTACGTGGAT
GATGCAAAGCGGTCTTATTTTGGCAACAAGTGTCCTTTATCCG-----AACAAGAGAGAAAAGAGAAGGACGTGGCCTTG
GCCTATCCAAA-----GCAGATTAAGACACCAATAATTGT----------------------------------------
------------------TTTTT------------------------------AACCAATAATTGTGTTACCATGTACA-
----CGTTATA-----------------------------------------------------------------CTAG
--TTGTT-TAGTTGTATGAA---ACTGTTCTCGCCTCTCTTTTTCC-GAAAAATA---TAATACAGACCCTCACAACACG
AATGCAAACTCACCCCCTATGA-------ATACACGGCATTCTTCTGACGGATGCGCATGTCTCATCTTCGTTAAAGTTG
AACTCAGCAG-ACTGTCA--TTTTTTCCAGAGTACGAGCAAGTATGGCCTAGAGTGACC-------------GCACCAAC
GGCA----CGAGCATCATCAGCA-------------GATACTGGAGACAACTCCTAGTGTCCTT----------------
-----------------------------------------TATCCATGCAGACACTGAAAATCTGGGG-----------
T-------------CCCATATTATTATTTT-ACTCCAATCATGCAACCTTAAAAAGGAAGAAAAAAAAAGTACTCCAATC
AGGCAGGTTGGTGCTC-------------CATATCCTTCGCCA------ACCACGACCAATAATGTAAGCCACCATCCCT
CATTTCAGACCCAGCCCGGCACGCGACGACACACAAG---------ACAGAGCCCTCGCTCCTTCAAATACTACC-----
TGACATCCCTATCC------TATCGACCAAGAG---------CGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACG
ACCAAGAGCGAGACGAGAGTGAGTGACACCGCCTA--TCGGTTGC----------AAATGGCCGTCAAGGTCGTCGCCGG
GAAGACCACTGCTGCTCAGCCCAAGAGCGTGGGCCGGCGGCTGTGGCGCCTGGCGCGCACCGTCGTCTACCTTCTGCGCC
GCGGCGTGCTGTCGTCCGGGCGCAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGGCGGCTTC
GTCAACTTCCACCGCCGCGCGGCGGCTCGCACTCGCTCCTCCT---CTGTCGCGGTGAAGCGCCGCGACGACGAAACCCC
CGGCTGTTACAACAGCTACGACGCGGCCGACATCGCCAGGGTGTTCGAGATGCTCAACGACGGCGGGC---ACCTCTTCG
ACGACGAGGACGGGGGGCCCGCGGTGGGGACGCCCTCTCCCGCCGCGTGGGCGTCGCCGGCCTTCGGGCGCAGCAGCGCG
GCTACGGGCCAGCCGCGCGTCACCGACTCGCCGTTCATGGCGGGCGAGCACCAGCAGGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCGGCAACTGCGCGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAACTACGGCCACGTCGTCCCAA
GGCCGGTCGCCGCTTAAGTGTAGAATT---ATTAGTGATGGACTGCTTGAGGCGGCCGCCGCGGGTCGCCCGGCAGGGGG
AGCACAACGTTGCCATGTCTTCATCTTCAGATAATACTATAAATCAACCACATGACCACATCCTCTGTAAACGACTAAAC
GTAAAACATTGTGCAATTTGAATTGTGGTGGT---GTGGTACACTTGTATTGGT-----GCTTGGGCTATCTGTCGTTCG
GGGACGGTCATGAGTCAGGACCG-GGCCCGCGTGAAAGCAGGCACCAGCTACAGCTGTG--------GGTACATATAAAG
AAAGCATGGGAGGAGCCGGAAAATACATGGATGAATCCGG----------------------------------------
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>chr1B_1
CTAAT---------------------------------------------------------------------------
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------CTCTACTTCTCCTAAATTTGGATAACAATCTATTGAGCACTTGACACCAAACTTTCTGCACATGAGTTTTGTAC
TTTGTAGCACCGACCTCTTACGTGTAGATGAAATTAGGTGTGGTGCTACGTACCATATTTTTCTATGTACTACGTGGATC
ATGCAAAGCGCTCTTATTTTGGCAACAAGTGTCCTTTATCCGAAAAAAAAAAGAGAAGGACGTGGCCCTGGTCTATCCAA
AGCAGATTAAGACACCAATAATTGTGTTGTTTTGGTTTTTAACCAATAATTATGTTTTTTATCAATAATTGTGTTACTAT
GTATACTTTATAAGCACGTAGATTCAGTGGGGATTCTCTCCCCCTGTGATTGTTTAAAAAAATATAAGCACGATACTCCC
TCCGTTTCTAAATATTTGTCTTTCTAGATATTTCAACAAGTGACTACATACGGAGCAAAATAAGTGAATATACACTCCAA
AATATGTCTATATATATCCGTATGCGGTAGTTCATTTGAAATCTCTAAAAAGACAAATACTCCGTATTTAGGAACGGAGG
GAGTAGCTGTTAGTTGGATGAAATTGTTCTTGCCTCTTTTTTTAAAAAAATATAATACAGACCATCACAACACGTATGCA
AACTCACCCCATGAATATACGGCATTCTTATGACGGATGCGTATGTCTCATCTTCGTTAAAGTTGAACTCAGCAGACTGT
CATTTTTTTTTCAGAGTGACCTATGCCGCACTGGACCAAACGGCACGAGCATCATCAGCACGGGTGCGTCGACATCGATA
CTCGAGACAACTCCAAGTCTTTCTCCGAGACGTTGAGAACATCGACATCCATATCCATGCAGACACTGAAAACTCGAGAA
GGATTGAAGCCTGAAAGACAAACTCAAAAAAAAAAGTGTCGCCATCCGTCCAAGCACTGCACATGCAAGGACAAAACAAA
AACCTAAGCTAAACTACTAATCAGAGGGGAGGCATTAGAATTCTCCTCCCCGTCACCGGCCGCCGGAGGGGCAGGTAGAG
GGGAGACGAGCCTACAGGCTCATTGGTGAAGATTGGAGGGAAGAGTTTACCCTAGCCATCAAGGGATATAGGGGAGAAAA
ACCTAATCTCTACTTCTCCTAAATTCCGATAACAATCTGTTGAGCACTTGAAAACAAACTTTCGGCACATGAGTTTTGTA
CTTTGTAGCACCGACCTCTTACGTGTAGATGAAATCTGGTGTGGTGC----TA-------------TGTGCTACGTGGAT
CATGCAAAGCGCTCTTATTTTGGCAACAAGTGTCCTTTATCCA-----AACAAAAAAGAAAAGAGAAGGACGTGGCCCTG
GCCTATCTAAA-----GCAGGTGAAGACACCAATAATTGTGTTTTGTT--------------------------------
-----------------GTTTTT------------------------------AATCAACAATTGTGTTACCATGTACAG
TATACGTTATA-----------------------------------------------------------------AGTA
--GTTGT-TAGTTGGATGAAACTACTGTTCTTGCCTTTTTTTTTCTTGAAAAATA---TAGTACAGATCCTCGCAACACG
AATGCAAACTCA-CCCCTATGA-------ATATACGGCATTCTTATGACGTATGCACATGTCTCATCTTCGTTAAAGTTG
AACTCAGCAC-CCTGTCA--TTTTTTCCAGAGTACGAGCAAGTATGGCCTAGAGTGACC--TATGCCGCACTGCACCAAT
GGCACGA----GCATCAGCACGGCTGCGTCGACGTCGATACTCGAGACAACTCCAAGTCGTTCTCCAAGATGTGTTGAGA
ACATCGACATC----------------------------CATATCCATGCAGACACTGAAAACCCAGGGTTGCACTAATC
T-------------CCCATATTATTATTTT-ACCCCAATCATGCAACCTTAAAAAGGAAG--AAAAAAAGTACTCCGATC
AGGCAGGTTGGTGCTCAAAGAAAAGGCTCCATATCCTTCGCCA------ACCACGACCAATAATGTAAGCCACCATCCCT
CGTTTCAGACCCAGCCCGGCACGCGACGACACACAAG---------ACAGAGCCCTCGCTCCTTCAAATAC---C-----
TGACATCCCTATCCTATTCCTATCCAACGACCAAGAGCCAGACGAGAGTGAGTGACAGTAGCGTTAGTACCTATCCAACG
ACCAAGAGCGAGACGAGAGCGAGTGACACCGCTTATCTCGGTTGC----------AAATGGCCGTCAAGGTCGTCGCCGG
GAAGACCACTGCTGCTCAGCCCAAGAGCGTGGGGCGGCGGCTGTGGCGCCTGGCGCGCACCGTCATCTACCTTCTGCGCC
GCGGCGCGCTGTCGTCCGGGCGTAAGCTCGCCATGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGGCGGCTTC
GTCAACTTCCACCGCCGCGCGGCGGCCCGCTCTCGCTCCTCAA---CCGTCGCGGCGAAGCACCGTGGCGACGAAGCGGC
CGGCTGTTACAGCAGCTACGACGCGGCCGACATCGCGAGGGTGCTCGAGATGCTCAACGACAGCGGGC---ACCTCTTCG
ACGACGAGGATGGG---CTCGCGGCGGCGACGCCTTCTCCGACCACGTGGGCGTCGCCG---------------------
GCTACGGACAAGCTGCACATCACCTACTCGCCGTTCACGGCGAGCGAGCACCAGCAGGTGGACAGGGAAGCCGACGAGTT
CATCAGGAGGTTCTACCAGCAACTGCGCGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAACTGCGGCCACA---TCCCAA
GGCCGGTCGCCGCTTAATTTCAGAATT---AGTAGTGATGGACTGCTCGAGGCGGCCGCC---GGTCGCCCGGCACGGGG
AGCACAACGTTGCCATGCACTCATCTTCAGAAAAC---GTAAATCGTCCACATGACCGCATCCTCTGTAAACGACTAAAC
GTGAAACATTGTGCAATTTGAATTGTGGTGGTACGCTTGTATAGTTGTATTGCT-----GCTTTGGCTATCTGCCGTTCG
GGGACAGCCA------------G-GACCCGGGTGAAAGTAGGCTACATCTACATGTGTG--------GGTACATAGAAAG
AAAGCAT---AGGAGTCGGAAAATACGTGGATGAACCCGGGTGCATATGAGCCCACTTCAGAAAACACATTTCTAATTGC
CAAAAAAATCTGAAAAACAGTTCCACATGTACAGCTCCACATTGTATGTGCGCACCGAAACTTTCGCTGAAAAACAAAAT
TATCTTT-GGCCCGTGCAAAAAAGACAA--AAGAAAGTGTCTTGAAACGCTATTTGAAAGCACTGAAATTTGTCTTTTTT
GCGGAGGCAA---AAAAAGGCA-TTTTTTCGCTAAATTTTATGTCGTACACATATTTTGCAGAGATGGTAGACGTGAAAT
TTTGTTTTGAAAATATTCACCTTTTAAAACATGTTTAAAATGCTTTTTTTAAAAGCGGGTTCATATGTACCCGGTTTCAA
GACA-TTCAGTTCGGATAGAAACTTACTTCG----------ACT----------GCAAACTACTCAGAGATTGTCCCAGC
CAATATCGGAGCCCGAATCGTCCCGTCCTTCGAATCGAGCTCGATCACCCTTGAGGGACCAGCG---TCCTCCTCCTCCT
CCTCCTCCTTCTCCTTCCTCACCCCCTTA-TCACCGGCTTGTTCCGATGCACCGACTACTCATACTCCTCCAACACGAGG
TGCATATTTTCCGCCCTAAACCTCGCCATGGTAGCCTCATCATGCCGATGACTGTCGCCCTGATCCAAGATGACCCGAGT
CTCTGATACGTCTCCAACCTATCTATAATTTTGG--ATTGTCTCATGCTATTATATTATCAATC-TT-ATATACTTTATA
TGCAATTTTATATCTTTTT-----------------------------------------------------------
>chr1B_1
CTAAT---------------------------------------------------------------------------
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------CTCTACTTCTCCTAAATCTTGATAACAATCTATT----------------------------------------
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---------------------------------------------------CACCAAACTTTCGGCACATGAGTTTTGTA
CTTTGTAGCACCGACCTCTTACGTGTAGATGAAATTAGGTGTGGTGC----TACCATGTTTTTCTATCTGCTACGTGGAT
GATGCAAAGCGGTCTTATTTTGGCAACAAGTGTCCTTTATCCG-----AACAAAAAAGAAAAGAGAAGGACGTGGCCCTG
GCCTATCCAAATTAAAGCAGATCAAGACACCAATAATTGT----------------------------------------
------------------GTTTTTTGTTTTAGCAAATAATTGTGTTTTTTTCCAACCAATATTTGTGTTACCATGTATA-
----CGTGATA-----------------------------------------------------------------GTGG
--TTG-T-TAGTTGGATGAA---ACTGTCCTTGCCTTTTTTTC---TGAAAAATATAGTAATGCAGATGCTCACAACACG
AACGCACACTCACCCCCTACCGAATACCGATACACGGCCATCTTCCGACGGATGCGCATGTCTCATCTTGCTTAAAGTTG
AACTCAGCAA-AGTGTCG--TTTTTTCCAGAGTACGAGCAAGTATGGCCTAGAGTGACC--TATGCCGCACTGCACCAAC
AGCACGA----GCAACAGCACGGCTGCGTCGACATCGATGCTCGACACAACTCCAAGTCCTCCTCCCAGATGT--TCAGA
ACATCAACATCCATATCCATTCTATTCGGGAAAAAAATGCATATCCATGCAGACACTGAAAACCTGGGGTTGCACAAA--
--------------------------------------------AACCTTAAAAAGGAAG--AAAAAAAGCACTCCAATC
AGGCAGGTTGGT-------------GCTCCAAATCCTTCGCCA------ACCACGACCAATAATGAAAGCCACCATCCCT
CGTTTCAGACCCGGCCCGGCACGCCACGACACACAAG---------ACACAACCCTCGCTCCTTCAAATAC---CTGACA
TGACATCCCTATCC------TATCGACCAAGAG---------CGACAGTGAGTGACAGTATCGTTAGTACCTATCCAACA
ACCAAGAGCGAGACGAGAGCGAGTGACACCGCTTATTTCGGTTGC----------AAATGGCCGTCAAGGCCGTCGCCGG
GAAGACCGCTGCTGCTCAGCCCAAGAGCGTGGGGCGGCGGCTGTGGCGCCTGGCGCGCACCGTTGTCTACCTTCTGCGCC
GCGGCGCGCTGTCGTCCGGGCGTAAGCTCGCCACGGACCTCCACCGCAGCAGGGACGCCAGCAAGGCCCTCGGCGGCTTC
GTCAACTTCCACCGCCACGCCGCGGCTTGCTCTCGCTCCTCCTCTGTCGTCGCAGCGAAGCGCCGTGACGACGAAACCGT
CGGCTATTACCACAGCTACGACGCGGCCGACATCGCCAGCGTGTTCGAGATGCTCAACGGCAGCGAGC---ACCTCTTCG
ACGACGAGGACGGGGGGCCCGCGGCGGCGACGCCATCTCCCGCCGCGTGGGCGTCGCCGGCCTTCGGGCGCAGCAGCGCG
GCTACGGGCCAGCCGCGCGTCACCGACTCGCCGTTCACGGCGGGCGAGCACCAGCAGGTGGACAGGAAAGCCGACGAGTT
CATCAGGAGGTTCTACCGGCAACTGCGCGCCCAGAAGAGCGTCTCCGCCACGCCGGAAAACCACGGCCACGTCGTCCCAA
GGCCGGTCGCCGCTTAATTTTAGAATT---AT---TGCTGGACTGCTTGAGGCGGCCGCC---GGTCGCCCGGCA-GGGG
AGCACAACGTTGCCATGTCTTCATCTTTAGAAAAC---ATAAATCATCCACAT---------------------------
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>chr2D_1947
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-------------------------------------------------------------------TGAAAAACAACAT
TTTCTTTTGGCCCGTGCAAAAAA-GACA--AAAAAAATGTTGTGGAACGCTATTTAGAAGCACTAAAAATTGTTTTTTTT
GTGGAGGCAAAAGAAAAGGGCA-ACTTTTCACAAAATTTTGTGTCGCCG------------GAGAAGGTAGATGTAAAAT
TTTGTTTTGAAAA-ATTCATGTTTTAAAACATGTTTAAAATGGCTTTTTGAAAAGCGGGTTCATATGTACCCGGTTTCAA
AGATGTTCAGTTCGGATACAAACTTACTTCG----------ACTACAAACTACTGCAAACTACTCAGAGATTGTCCCAGT
CAATGTCG----------------------------GAGCTCGATCACCCTTGAGGGACCAGCCTCATCCTCCTCCTCCT
CCTTCTTATTCTCCTTCCTCGCCCCCTTCTTCACCGGCTTGTCCCGATGCACCCAGTACTCATACTCCTCCAATGCGAGG
TTCATATTTTCTGTCGTAAACCTCGCCATGGTAGCCTCATCCCGCCGATGAATGTTGCACTAATCCAAGATGACCTGAGT
CTCTGATACGTCTCCAACGTGTCTATAATTTTTT--ATTGTTTCATCCTATTATATTATCAATCTTT-AGATACTTTATA
TGCAATTTTATATCATTTGAACTAA-----------------------------------------------------
>SNPs
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----------------S-------S-------------------------------------------------------
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---------S--------------------------------------------S-------------------------
-S--------------------------------S--------------S-------------------S-----S----
---------------------------------------------------------------S----------------
-------------------------------S------S---S------S-------------S----------------
-S-----------S--------------------S---------------------------------------------
S---------S--S----S-------------SSSSS-------------------------S-----------------
------------------------SS---------------------------------------------------S--
----------------------------------------------------------------------S---------
-----SS-------------------------------------------------------------S-----------
---------S--------------------S------------------------------S------------------
--S------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------S-----------------
-------S----S-------------------------------------------------------------------
------------------------------------------------------------------------S-------
-S-----------------S-------------S----------------------------------------------
-----------------------------------------S--------------------------SSS---------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-------------------------------S--------------------
---S----------S----------S---S--S-----------------------------------------------
---------S---------------------S------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------S-------------S---------SSSSSS-S--------------------------------
-------------S------------SS--S-------------------------------------------------
--------------S-----S------SSS-----S--------------------------------------------
-S--------------------S----S----------------------------------------------------
--------------S-S--------------------------------------S---------S-----S--------
-------------S-------------S---SSSSSSSSSS-----------------------S---------------
------------------------------------------S--------------------------S--S------S
----------S--------------------------------S------------------------------------
---------------------------------S-------------------------S--------------------
-------S-S-------S--------------------------------------------------------------
--S--------------------------------------S-----S---------------S---S------S---
>forward_3926
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-----------------------------------------------------------------TCCGAGACGTTGAGA
ACATCC--------------------------------------------------------------------------
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>reverse_5311
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------------------------------TTGAACCCGGCACTTCAGAA------------------------------
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------------------------------------------------------------------------------
