>input_sequence_74588
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---------------------------------------CCT-CCCGGCGCAT---CTCCGACTCCATGGCCCGTACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCGGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTACCCTTCCAGCGCCTGGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGTCCTACCTCGTGGGGCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGAGAGAGGGCCTAAGCT
C-------TGTGCGTCGTCGTCTGTTAGTCGTCGTCTTAGCCAGATGTGTTCAGCGGTGAAATTG--TGCGTGTTTGTAG
TGT--------------------CTGTTCGTGCCATGGTGGATGTAG-TGTTCCTGATCTGATGTCACCTCCTTGCTGTC
ATCAGTAACTGAAATGAAAA-TGTTTGTTATCT-----------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1A_1_TraesCS1A01G361700
GTTTTGTGCACAAAAGATTGTGGCCGTAGGTTCAGACTTGGCAGCATCTGAAGATGGATTGGTAACTTTTTTGTGACCGG
CCAGCGCCACGGTAGTATCATCTACAGTTCGGGGTTGTGATATCTTTGGCACATTTGTTTCTTCATTCAGGACCGAGGAG
AGGAGTCAAGTGAGTGACTCATAGCTGAAGCGACAGTGGCATGGCCTCGGTGTATCAACTGATTCTAGTTTCTTTTTTGA
ACATAACTGAATATAGTTTTTGCATTCAGCTAATTCCTCGTG-TCGTGTGATGCTAGTTTGCAAACGGTGCTGCAATACG
TAGAAGCAATGCGTAGCACAATTAAAATGGGATGATAATATATTCTGAACGAGAAGAAAGACGCACAATTTATTCCTTCT
TTCTCTTTTGATTCGAGGAACACTC-GCCCACAAATCGTTCAAATTCGAATGCCAAAACAATTGTTTGTACTGTAATATT
TCTATTTTTTTTTTGCCGGGAAACTGTTTCTAGTTATCAGTAGGTTTTTTATTTGGGCACCCCGCAAAAAAAGTTT----
-----------------------------TTTTTATTTGGGCGTGTTGGCGGCAAAGAGCGAACACGATCGCGCCCTTCT
CCCAGGCCATTTCGTTTCGTC--------------TCCGGCCTTCAGTGTGCACGCAAAATCAGTGGCGCGGGGCACGAT
CCGGATGACTCCTCTTCGACCAATCAGGGCACGCGAGCCACCTCGCCGCGGATCACCCCCTCGGACTCCTCTTCAACCAA
TCAGAGCGCGCGAT-CCCACCTCCCACGGATCGCC-CCCTCGAAACCAGATCGCAGCCGTCCAC-GCACGACGCATCCAA
CGGTCCACGCCCCA-----CCATCCCTCCCGAAAAACCAAAACCAACGCGCGG-CTCCCCGCTCCAAT-CCCCCGCCCGC
TCGGCGCTCCCCTCCTTCCCTATT-----TAACGCCGCCCATTCCCCTTCTTCCTCCTCACCCCAAATCCCCCAACCCTC
CCAGCG---------------CTCCCCCCTCCTCAACAACCT-CCCGGCGCAT---CTCCGACTCCATGGCCCGTACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCGGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTACCCTTCCAGCGCCTGGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGTCCTACCTCGTGGGGCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGAGAGAGGGCCTAAGCT
C-------TGTGCGTCGTCGTCTGTTAGTCGTCGTCTTAGCCAGATGTGTTCAGCGGTGAAATTG--TGCGTGTTTGTAG
TGT--------------------CTGTTCGTGCCATGGTGGATGTAG-TGTTCCTGATCTGATGTCACCTCCTTGCTGTC
ATCAGTAACTGAAATGAAAA-TGTTTGTTATCTGTTCTAAGACCTGTGCCTTCTGATGCTTGTTTTTCATTGTTTATGAG
CTTGTTGTTGAATGTGGTTCCTCAACTGGTGCATTTGATTAACCCAACTTGTGAAATTTACCGTCAGTTATAGCTACCGT
GCTGTAATTTCGCAATCACTAGTAATCTTTTTTTGGTTGCATCTGAATCTGAACGAATAACCTTGGCTCGTCCTTCAGTT
CTGTGTATCCATCTGTTCTAATTTGTGTCTCTG-TTTTTCCTGTTTCCAATTTTTAATTTCGACTCTTGCAACTGCTGGA
AAATGACTCTTA--CTCAGATGTACCATGATCACAACTACACCACTAAATATGATGCAGATAGACAAAAGATGTTTCTAT
TTTGCAGGTTCATATTTGTTTGTTCTATGATC-----GATGGATTTCCT-CACCTGCAAATTCTGCAGTGTGATTGAGGT
AGAAAGTGTAACTAAAGATGGCACAGGTGAAACTGCTAGATCAGAAAGAAATATAGATCTGTTGAGTAACTTTATGTTGG
AAAGAGGTCATTTGATGAAAAAGGAATGTAGAACAGTCTTTGACTTGTTCATAATGCTTCGCTGCAGAGGAAAAAGGATG
CCAGATTTCTGGTTTAATGAACTGAAGAACCATGAAATCCTAGCTGAGGAGGTGAGACGCTGCATATTTTTGCAATAGAA
ATTCCTTCTCTGAACGGTCGGACATGTTTTTGCTCCACTTTTCTTAAGATCCATCTGCATATAATTTTTGTTTTGGCGTC
TATTTTATCGTTTATTTACATGTACCCAGGTCCAGGAAAGACAGACAAGGAAACTCTTAGGAATTCAATTCAAGGTACAG
AATTAGCATTGAAACTTCTGCGTGAGCATGACTTTATTTATCT-CTCATTTCAGTATTGTAGTTGCAAAACGAAATGGCG
CTGTATGTAGTAGTGCAGTTCTGTGCTTTAAGGTTTTTTCTCTGTTCTAAATGTACCTTGTTGCTTGCCAGATTTGCCTA
TCT
>chr1D_259
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TTTGCGTTCAGCTAATTCCTCGCGCTCGTGTGGTGCCAGTTCACAAACTGCA---CAATACG
TACAAGCAATGCGTGGCGCAATAGAAACAG-----------ATTCTGAAGGAGAAGAAAGACACACGATTTTTCTTC---
TTTTCTTTCGATCCGGGGAACACCTGGCCCACAAATCGTTCCAATTCAAATACCAAAACAATTGTTTACCGTAAT-----
----TTTTTTTTGTGCCGGGCAGTAAAATTATTTTTGCCGAAGATCAGAAGCAGTAACTCCAGCCGTGAACCCTCCTCCA
TTTCCTACAACGACGGCGTGCCAGTTGGGTTTTTGTTTGGGCGTGTTGGCGGCAACGAGCGAGCGCGATGGCGCCCTTCT
CCCAGGCCATTTTGTTTCGTC--------------T--------------GCACGCAAAATCAGTGGCGCGGGGCACGAT
CCGGATGACTCCTCTTCGACCAATCAGAGCCCGCGAGCCACCTCGCCGCGGATCACTCCCTCGGACTCCTCTTCGACCAA
TCAGAGCACGGGAA-ACCACCTCCCACGGATCGCC-CCCTCGACACCAGATCCCAGCCGTCCAG-GCACCCCACATCCGA
CGCTCCACGCCCAA-----CCATCCCTCCCGAAAAACCAAAACCCACGCGCGG-CTCCCCGCTCCAATCCCCCCGCCCGC
TCGGCGCTCCCCTCCTTCCCTATT-----TAACACCGTCCCATCCCCTTGTTCCTCCTCACTCCAAATCCCCCAACCCTC
CCAGCG---------------CTCCTCCCTCCC---CAACCT-ACCGGCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGCCTACCTCGTCGGCCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTA----
--------------------------------------------------------------------------------
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---
>chr1B_565
--------------------------------------------------------------------------------
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---------------------------------------GGCGCCTTGGCGGCAAAGAGCGAGCACGATGGCGCCCTTCT
CCCAGGCCATTTCGCTTCGTCTTCGGCCTTCAGTAT--------------GCACGCGAAATCAGTGGCGCGGGGCACGAT
CCGCATGACTCCTCTTCGACCAATCAAAGCGCGCGAGCCACCTCGCCGCGGATCACTCCCTCGGACTCCTCTTCGACCAA
TCAGAGCGCATGAAGCCCCCCTCCCACGGATCGCC-CCCTCGATACCAGATCCCAGCCGTCCAC-GCACGACGCATCCAA
CGGTCCACGCCCCA-----CCGTCCATCCCGAAAAACCAAAACC-ACGCGC-G-CTCCCCGCTCCAAT-CCCCCGCCCGC
TCGGCGCTCTCCTC-----CTATT-----TAACGCCGTCCCATTCCACTCTTCCTCCTCGCTCCAATTCCCCAACCCA-C
CCAGC-----AACATCCC--------------------------------CAA---CACCGGCGCCATGGCCCGCACCAA
ACAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTACCTGGTGGGGCTGTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTA----
--------------------------------------------------------------------------------
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---
>chr1A_735
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--------------------------------------------------------------------------------
---------------------------------------------------------------GACTCGACTCCAACCAA
TCAGAGCGCGGGAT-CCCCCCTCCCACGGATCACT-CCCCCGAACCCAGATCCGAGCCGTCCAC-GCACGACGCATCCAA
CGCTCTAGGCCCCA-----CCATCCCTCCCGGAAAACCAAAACCCACGCGC-G-CTCCCCGCTCCAAT-CCCCCGCCCGC
TCGGCGCTCCCCTCCTTCCCTATT-----TAACGCCGCCCATTCCCCTTCTTCCTCCTCACCCCAAATCCCCCAACCCTC
CCAGCG---------------CTCCCCCCTCCTCAACAACCT-CCCGGCGCAT---CTCCGACTCCATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCGCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGTCCTACCTCGTGGGGCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTTGCCCGCCGCATCCGTGGAGAGAGGGCCTAGGCC
GCAATCTGTGCGCCGTGAGTGT--TTAGGTCCA-CCTTAGCC---TTTGTCCAGCGTTGGAAATGTATGCGTGC---TAG
-------------------TGTGTTGTTCGTTCCATGGTGGATGTAG-TGTGTCTGATCTGATGTCACCGTCTTGCTGCC
ATCAGTAACTGAAATGAAAA-TGTT-GCATTCTGTTCTCGGATCTTTGCCT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1D_735
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GACTCGTCTCCAACCAA
TCAGGGCGCGCGAT-CCCCCTTCCCACGGATCGCC-CCCTCGA-ACCAGATCCCAGCCGTCCAC-GCACCACACATCCAA
CGCTCCACGCCCCA-----CCATCCCTCCCGGAAAACCAAAACCCACGCGC-G-CCCCCCGCTCCAAT-CCCCCGCCCGC
TCGGCGCTCTCCTC-----CTATT-----TAACGCCGCCCATTCCCCTTCTTGCTCCTCACCCCCATTCCTCCCAG----
CAATC-----CCCCAAA-------------TCTCCTCAGCCT--CCCGCGCAT---CTCCTCCGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACAGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCCCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTACCTGGTGGGCCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGAGAGAGGGCCTAAGCT
C-------TGTTCGTCGTCGTCTGTTAGTCGTCCTCTTAGCCTGATGTGTTCATCGGTGGAAATG--TGCGTGC---TAG
TGT--------------------TTGTTCGTGTCGTGGTCGATGTAG-TGTGTCTGTTCTGATGTCACCATCTTGCTGTC
ATCAGTAACTGAAATGAAAA-TGTT-GCTATCTGTTCTAAGATCTGTGCCATTTGATGCTTGTTTTTCATTGTCTGCGAG
CCCGTTGTTGAATGTGATTCCTCAACTGGGACATTTGATTATCCCAACTCGTGAAATT----------------------
----------CGCAATCACTAGTAATCTTTTTT-GGTTGCATCTGAATCTATT---------TTGGCTCGTCCTTCAGTT
CTGTGTATCCATCTGTTCTATTCTGTCTTTCTGATTTTTCCTGTTTCCAATCTTCACTTTCGACTCCTGCAACTGTTGGT
AAACAACTCTTACTCTCAGATGTACCATGATAACAACTACACTACTAAATAGGATGCAGATAGACAAAAGATGTTTCTAC
TATCTTGCATGGTTC-TGTTTGTTCTATGATCCATTTGATGGATTTCCTGCACCTGCAAATTCAACAGTGTGATTGAGGT
AGAAAGTGTAACCAAAGATGGCGCAGATGAAACTGCTAGATCAGAAAGGAATGTAGATTTGTTGAGTAACTTTATGTTGG
AAAGAGATCATGTAATGAAAAAGGAATGTAGAACAGTCTTTGACTTGTTCATAATGCTTCGCTGCAGAGGAAAAAGTATG
CCAGATTTCTGGTTTAATGAACTGAAGAACCATAAAATCCTAGCTGAGGAGGTGAGACACTGCATATTTTTGCAACAGAA
ATTCCTTCTCTGAACTGTCGGACATGTTTTTGCTCTACTTTTCTTAAGATCCATCTGCATATAATTTCCGTTTTGGCATC
TATTTTATCATTTATTTACATGTACCCAGGTCCAGGAAAGACGAACGAGGAGCTCTTAAGTAATTCAACTCAAGGTACAG
AATTAGCATTGAAACCTCTGCGTGAGCATGATTTTATTCATCACCTCATTTCAGTACTGCAGTCGCAAAACGAAATGGCG
TTGTATGTAGTAGAGCAGTTCTATGCTCTAAGGTTTTTTCTCTGTTCTAAATGTACCTTGTTGCTTGCCAAAGTTGCCTA
TCT
>chr1B_735
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GACTCGTCTCCAACCAA
TCAGAGCGCGCGAT-CCCACCTCCCACGGATCACT-CCCTCGAAACCAGAT-CCAGCCGTCCAG-GCACCCCACATCCAA
CGGTCCACGCCCCA-----CCATCCCTCCCGAAAAACCAACACCCACGCGC-GGCTCCCCGCTCCAAC-CCCCCGCCCGC
TCGGCGCTCGCCTCC-----TATT-----TAACACCGCCCACTCCCCTCCTCCTTCCTCACTCCAATTCCCCAAACCT-C
CCAGCG---------------CTCCTCCCTCCT---CAACCTCCCCGGCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGT
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGCCTACCTGGTGGGGCTCTTCGAGGACACCAACCTGTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCACGCCGCATCCGTGGCGAGAGGGCCTAAGCT
GC--TCTGTGCGCGTCGTCGT--------------CTTAGCCAGATGTGTTCAGCGCTGAA-----------------AG
TGT--------------------TTGTTCGTGCCATGGTGGATGTAG-TGTGCCTGATCTGATGTCACCATCTTGCTGTC
ATCAGTAATTTAGATGAAAA-TGTTGGCTATCTGTTCTAAGATCTGTGCCTTTTGATGCCTGTTTTCGATTGCATGTGAG
CCTGTCAGTGATTGTGAGTCG-CAAATCGTGCATTCTATTATCCCAACTCGTGAAATTT---------------------
--------------------------------------------------------------------------------
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---
>chr6A_735
--------------------------------------------------------------------------------
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---------------------------------------------------------------GACACCTCTTCAGCCAA
TCAGAGCACGCGGT-CCCCCTTCCCACGGATCACC-CCTCGAA-ACCAGATCGCAGCCGTCCAC-GCACCACGCATCCAA
CGCTCCACGCCCG------CCATCCCTCCCGAAAAACCAAAACCCACCCGCT---------------------CGCTCGC
TCGCCCGGTGCCTC-----CTATT-----TAACGCCGCCCCCTCCCCTTCTTCTTCCTCGCTCCAATCCTCCCAACCC-C
CAAGC-----ACCAGAG-------------CCTCCTCAACCT-CCCGGCGCCGGCGCATCGACGGCATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGGCTGGTGAGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTACCTCGTGGGCCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCATAGGCT
GC--TGCTGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1B_745
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------CAACCAA
TCACAGCACGCGAA-ACACCACCCCACGGATCTCTCCCTCCAT-ACCAAATCTCCACCGTCCAC-GCACCACGCATCCAA
CGCTCCATGCTC-A-----TCTTCCCTGCT-GAAAAGCAAAACTCACGCGC-C-CTCCCCGGGAAAAT-CCCCCGCCCGC
TCGGCGCGCGTCTCC-----TCCTCTATTTAACACCA-TCCCTCCCTTTCTTCCTCCTCACCCCAGTCCCCAAATCCC-C
AAGCGCGACAACCAACT-------------CCGCCTCGACCT-CCCGCCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTTAAGAAGCCCCACCGCTTCCGCCCCGGTATCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTAATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTACCTCGTCGGGCTGTTCGAGGACACCAATCTGTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAAGCT
GC--T----------CGTCGTGTGTTAGATCCT-TGTTAGGC---TGAGTTCGTCCGTGGAAGTG--TGTGTGC---TAG
TGGTGTTTCAGAATATGCCTGTGCTGTTCTTGTCATGGTGGATGTGT-TGTGCCTAATCTGATGGTACCTTCTTGTTGCC
ATCAGCAATGGAAATGAAAAGTGTTGGCTTCCTGTTCT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1A_746
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------AACCAA
TTAGATAACGCGAA-CGATC-TCCCCCGGATCACC-CCACGAA-CCTCGATCCCAACCGTCCATTGCACCACACATCCAA
CGCTCCACGCCC-A-----CCTTCCCTCCCGAAAAGGCAAAACTCACGCGC-C-CTCCCCTCCAAAAT-CCCCCGCCCGC
TCGCCGCTCGTCTCC-----TACT-----TAACGCCGCCCACTCCGCTTCGTTCTCCTCACTCCAATCCAATCTC-----
CAACC-----TCCTTCC-------------TCTCCTCAACCA-CCCGGCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCGGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGCGTACCTGGTGGGGCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGAGAGAGGGCCTAAGCT
C-------TGTGCGTCGTCGT--------------CTTAGCCAGATTTGTTCAGCGCTGAA-----------------AG
TGT--------------------TTGTTCGTGCCATGGTGGATGTAG-TATGTCTGATCTGATGTCACCATCTTGCTGTC
ATCAGTAATTTAAATGAAAA-TGTTGGCTATCTGTTCTAAGATCTGTGCCTTTTGATGCCTGTTTTCGCTTGTATGTGAG
CCTGTCAGTGAATGTGATTCACCATATCGTGCATTATATTACCCCAAGTCGTGAAATTTTCTGCCAGTTTAATCTACTGT
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr1D_746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AACCAA
TCACAGCAGGCGAA-CCACCACCCCACGGATCGCTACCTCGAC-ACCAGATCTCGACCGTCCAC-GCACCAAAAATCCAA
CGCTCCACTCCC-ACCTTCCCTTCCCTCCCGAAAAAGCGAAGCTCACGA--------------AAATT-ACCCCGCCCAC
TCGGCGCGCGCCGC-----CTATT-----TAGCACCGGTCCCTCCCCTCCGTCCTCCTCACCCCAATCCCTCCTCCT---
CAAGC-----ACCAGAACCCCCTCCCCCTCCCTCCTCAGCCT-CCCGGCGCAT---CGA----GCCATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACGGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCACTGCAGGAGGCCGCCGAGGCCTACCTCGTCGGCCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCT
GC--TCCGTGCGCGTCGTCGTGTGTTAGATCCA-CCTTAGCC---GTTGTTCAGCGGTCGAGATGT--GCGTGCTCGTAG
TGT--------------------TTGTTTGTGCCATGGTGGATGTAG-TGTGCCTGATCTGATGTCACCATCTTGCTGTC
ATCAGTAATTTAAATGAAAA-TGTTGGCGGTCTGTTCTAAGATCTGTTCATTTTGATGCCTGTTTTTGCTTGTTTGTGAG
CCTGTCAGTGAATGTGATTCACCAAATTGTGCATTATATTATTCCAACTCGTGAAATTTTCTGCCAGTT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr1B_746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AACCAA
TCACAGCACGCGAA-CCACCATCCCACGGATCACTACCTCGAT-ACCAGATCTCGACCGTCCAG-GCACCACACATCCAA
CGCTCCACGCTC-A-----TCCTCCCTCCCGAAAAAGCAAAACTCACGCA-------------------------CCTGC
TCGGCGCTCGCCTT-----CTATT-----TAACGCCGCCCCGTCCCCTTCTTCCTCATCACCCCCATTCCTCCCA-----
--ATC-----CCCCAAA-------------TCTCCTCAACTT-CCCGGCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAAGCGTACTTGGTGGGGCTCTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCC
GCAATCTGTGCGCCGTGAGTGT--TTAGGTCCA-TCTTAGCC---TTTGTCCAGCCTTGGAAATGTATGCGTGC---TAG
TGT--------------------TTGTTCGTTCCATCGTGGATGTAG-TGTGTCTGATCTGATGTCACCTTCTTGCTGTC
ATCAGTAACTGAAATGACAA-TGTTGGCTATCTGTTCTAAGATCTGTGCCTT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr1D_897
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CCCGC
TCGGCGCCCCCCTC-----CTATT-----TAACGCCGCCCATTCCCCTTCTTCCTCCTCACCCCCATTCCTCCCA-----
--ATC-----CCCCAAA-------------TCTCCTCAGCCT-CCCGGCGCAT---CTCCGACGACATGGCCCGCACCAA
GCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGAGGAAGCAGCTGGCCACCAAGGCCGCCCGCAAGTCCGCCCCGG
CCACCGGCGGGGTGAAGAAGCCCCACCGCTTCCGCCCCGGCACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGC
ACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTCGTGAGGGAGATCGCCCAGGACTTCAAGACCGACCTCCGCTT
CCAGTCCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTACCTGGTGGGGCTGTTCGAGGACACCAACCTCTGCG
CCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAAGCT
C-------TGTTAGTCGTCGT--------------CTTAGCCAGATGTGCTCATCGGTGGAAATG--TGCGTGC---TAG
TGT--------------------TCGTTCTTGCCATGGTGGATGTAGTTGTGTCTGTTCTGATGTCACCATCTTGCTGTC
ATCAGTAACTGAAATGAAAA-TGTT-GCTATCTGTTCTAAGATCTGTGCCTT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----S----------------S---------S---S----SS-----S-SSSSS-------
--S-----------S--S----SS---SS-SSSSSSSSSSS--------S------------S---S----S-SSSSSSS
--S-----S---S--S-------SS----------------S-----S---S---------------SSSS-SSSSSSSS
SSSS--------S-------S-SSSSSS-SSSS--SS-S-S--S-SSSSSSSSSSSS-S--SSS-SSS--SSS-SS----
----------------------------------S---------------------------S------S----------
------------------------------------SSSSSSSSSSSSSS------------------------------
---------------------------S--S-------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------S----------S-S----
---------------------------------------------------S------------------S---------
-------------------------S-S--------------S---------S----------------------S----
-S--------------S------------------------S-------S---------S-S-S-----SS-S----S--
--SSSSSSSS-----------------------S----------------SSSSSSSSSSSS------------------
--------------------S-S---S-S----------------------S--S-S---------S--------S---S
---SS--------------------------S----------S--------S---------------------------S
-S-SSS-SS-SS-SSS-----------------------------------------------SS---------------
------------S---------S---S---------------------S---S-----S---------------------
------S----S-S--------------------------------------------------------------S---
---------------------------------S------------------------S----------------S----
---------------S-------------------S-------------------------------SS--------S--
---------S--------------------------------SS--S----SSSSS-S--S-------S-----------
---------------S---------------S------S---S-------------S--S---S----------------
S------------S--------S----S------------------------------------------S-S-------
---
>forward_101
--------------------------------------------------------------------------------
-CAGCGCCACGGTAGTATCAT-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---
>reverse_1899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------AACCTTGGCTCGTCCTTCAG--
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---
