>input_sequence_74573
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------------------------------------------ATGCAACAACCGCAGCTGCAGCCCCGCGTCCGCGCGCG
CGCTTTCCTCCACGCCGCCGTCAAGCTCAACCCGAGGGGGAACCCGTTCCTCCTGCGCCGCCCCGCCGCGTCCGCCGGCG
GCGCCGTCGCGGGCGTCCAGCTGACGGTGTCGGACTCGGAGCTGTCGTCCCGGGGCTTCGCCGTGCGGCGCACCGCGGAG
GGCCTGGACGTGGCGGCGCTGAACGAGGTGTTCGCGCGCGTGGGGTTCCCTCGGCGGCAGGAGGAGCGGCTCCGGTGCGC
GCTGGAGCACAGCGAGGTGGCGTGGCTGGCGTCGGAGGCGACGGGGCGCCCCGTGGCGTTCGCGCGCGCGGCCGGGGACG
GGGTGTTCAACGCGGTGGTGTGGGACGTGGTGGTGGAGCCGTCGTGCCAGGGCCTCGGGCTCGGCCGCGCCGTCATGGAG
CGCCTCGTGGCGGAGCTCCGGCGCAAGGGCGTCGGCAACATCGTCCTCTACGCCGAGCCCAGGGTGGTCGGGTTCTACCG
CCCGCTGGGGTTCGCCATGGACCCCGACGGCATCCGGGGCATGGCGTACTACCGCAGCAAGCAAAACCAGAAGCAACAGT
GA------------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G327800
CTGGTGCTCATTGTACTGCCATGATTAAAGATGGATAGATCGAAGTTTTTCTTGCAAAAAAAATGGTTCGATGGTTAGGA
GTGTTGTACGCCTAGCACATCAGGATCAAAACTCTTAGTTTGACACCCTATGTATCTGTAAGGTGGAATACTTTGTCAAC
AAGAAATGATTTTCTCTTCGACAATAAGACATTTGCGGTAACTTTGTCGGTTTTAGAGTTTCGGGACTTTGATCTTGTGT
GAGTGTGTGTGTCAGTCTTTGTTTTTTGGTCGAAATGTTAGTGTGCGCATAATAGAGTAGAGGAAAAAAGGAAATGCATA
GGAAGGAGATGCGGTCACTGCCCTAGGACACAATCGATGACGGCGAAGCAAAAAAGACGACGAAAATGCTCCCTTGTCTA
TGTTGTCTTCTTTGCAAAATTAGTTGTCACTTAAACAGATATACTTTCTACTAAAGGTCTTATAGTATTTTTTTACAGAA
GTAGTATCTAACAATAATACTAGGTCTTAAATCTCAACTGCTTTCTTCGATCCATATTAATTATTGCTGATTTAGTATAA
TTGTGACAAAACTCTATGATCATTGCTTGGAAAAGAATCCACATTCATAAACTGAAACTACTCGCGTAAATTATTATTAC
CTTTAACCCTGATAAGTGTCACACATGTGACACGAATACATGACAACTTCGAACGATTTTCATGGCAAATTGAGTCACGC
AAGGATGACAACTTATCAAGCATGACAACTTTCTTTCCAGATGGTAGGTTTCATTTTTTAGGGCTTTTTTTTCTATCTCG
GATGGTAATTTTAGTTGGAAAAAAAACGTGAAGACGTATGTATCGTGTGCCATTTATCATTTGGAAAATTTTAACATTGG
CAGATGAACCCGATAATCTGCGTGACAGAATTAGTGGCGGGAAGAAAGCTAGCG-AACAGAC-GGGAAGGATAAGCAAGC
AGTCCATGGCCACAGGCGTCCGAAGCCATCAGCACATCAGCCATGCAACAACCGCAGCTGCAGCCCCGCGTCCGCGCGCG
CGCTTTCCTCCACGCCGCCGTCAAGCTCAACCCGAGGGGGAACCCGTTCCTCCTGCGCCGCCCCGCCGCGTCCGCCGGCG
GCGCCGTCGCGGGCGTCCAGCTGACGGTGTCGGACTCGGAGCTGTCGTCCCGGGGCTTCGCCGTGCGGCGCACCGCGGAG
GGCCTGGACGTGGCGGCGCTGAACGAGGTGTTCGCGCGCGTGGGGTTCCCTCGGCGGCAGGAGGAGCGGCTCCGGTGCGC
GCTGGAGCACAGCGAGGTGGCGTGGCTGGCGTCGGAGGCGACGGGGCGCCCCGTGGCGTTCGCGCGCGCGGCCGGGGACG
GGGTGTTCAACGCGGTGGTGTGGGACGTGGTGGTGGAGCCGTCGTGCCAGGGCCTCGGGCTCGGCCGCGCCGTCATGGAG
CGCCTCGTGGCGGAGCTCCGGCGCAAGGGCGTCGGCAACATCGTCCTCTACGCCGAGCCCAGGGTGGTCGGGTTCTACCG
CCCGCTGGGGTTCGCCATGGACCCCGACGGCATCCGGGGCATGGCGTACTACCGCAGCAAGCAAAACCAGAAGCAACAGT
GATATTCTATACATTACTGCCATCACCATTCATGCATGATCCATGCATCTCTGCTGTGCATTTCTTTCT--------TTC
TTT----TTCGCTTGTTATGCCAGGTGATTGGATGGAGACAGATCGGAAATGTTGAAATTGATCGATACACTTAACACTG
CTGCAGTGCTGAGTACATGAGTATATATGAGATGGATCATGGAACTGACCATCTGAATTTCTCTCTTGTTTGCTTG----
GCACTGGAAATCGGAAATGTTCAAATTGATCAATATCAATACACTTACATAGTTACATTCCACTGTGATCGACGAACAAT
TGATTGACGAACACCTTACACCAGAGAAACACAGG----------AGTATATGAGATGGTGCAATTCACTCATGAGC---
-AAGATCAAATCAAAGTGAAGTAGAGAAAGCACAACCAAGACCAGAAAGGATTCGAAAGCATCGAGCGACCTCGGTCGGT
GATG---GCACGTAGGTAGCCGTAGCCTAGCGGTGTCTGCGGATCGCGCAGGCGGAGAGGAGGACGAGGAGGATGAAGAC
GAGGACGGCGAGGAAGGAGGCGACGACGGCGCCGCTGGTGCGCTGGCAGAAGCCGTGGAACTGCATGCAGATGGGCGCCC
AGTTGGCGCGCCGGCTCCCCTCGTGCGCCACGTACACGATGGCCGCCGCCGCAGACGCAGCGGCCGTCAGCAGCACCACC
ATCACCGTGTCGCAGACGAGCAGCAGCAGCCTGACGCCGGTCGCCTTTGGCCGGATGATGCCCACGATGGAGAAGGGGAG
GGACAGCACCAGGTACCCCGCGGCGACGGCGTTGGCGACCATGAAGAAGGTGAAGGCCGGGAAGTCGTCGAACCTGGCGC
GGAACTGGAAGTACTCGGTGAAGACGGAGAGCGTCTCGTCGGAGGTGCCCGTGGAGATGGCGGCCGCGAGCGTGGGCCCG
AAGGCCGCCACCCTGAGCAGCAGGTCCACGAAGGCCATGCAGCGCCGGAAGCCCTCGGCGCCGCTGCGCAGGATG
>chr7D_869
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--------------------------------------------------------------------TTTTAATATTTG
CAGATAACCCCGACAACCTGTGTAACAGAATTAGTGGCGGGAAGAAAGCTAAGCTAACAGACGGGGAAGGATAAGCAAGC
AGTCCATGGCCACAGGAGTCCGAAGCCATCAGCACATCAGCCATGCAACAACCGCAGCTGCAGCCCCGCGTCCGCGCGCG
CGCTTTCCTCCACGCCGCCGTTAAGCTCAGCCCGAGGAGGAACCCGTTCCTCCTGCGCCGTCCCGCCGCGTCCGCCGGCG
GCGCCGTCGCGGGCGTCCAGCTGACGGTGTCGGACTCGGAGCTGTCGTCCCGGGGCTTCGCGGTGCGGCGCACCGCGGAG
GGCCTGGACGTGGCGGCGCTGAACGAGGTGTTCGCGCGCGTGGGGTTCCCTCGGCGGCAGGAGGAGCGTCTCCGGCGCGC
GCTGGAGCACAGCGAGGTGGCATGGCTGGCGTCGGAGGCGACGGGGCGCCCCGTGGCGTTCGCGCGCGCGGCCGGGGACG
GGGTGTTCAACGCGGTGGTGTGGGACGTGGTGGTGGAGCCGTCGTGCCAGGGCCTCGGGCTCGGCCGCGCCGTCATGGAG
CGCCTCGTGGCGGAGCTCCGGCGCAAGGGCGTCGGCAACATCGTGCTCTACGCCGAGCCCAGGGTGGTCGGGTTCTACCG
CCCGCTGGGATTCGCCATGGACCCCGACGGCATCCGAGGCATGGCATACTACCGCAGCAAGCAAAACCAGAAGCAACAGT
GATATA--------TACTGCCATCATCATTC-------ATCCATGCATCTCTGCTTTGCATTTCTTTCT--------TTC
TTTATTTTTCGTTTGTTCTGCCAGCTGATGGGATGGAGACAGATCGGAAATGTTGAAATTGATCGATACACTTAACACTG
CTGCATTGCAGAGTACATGAGTATATATGAGATGGATGATGGAACTGACCATCTGAATTTCTCTCTTGTTTGCTTGCTTC
GCGCTGGAAATCGAAAATGTTCAAATTGATTA--ATCAATACACTTACATAGTTACATTCCACAGTGATCGACGAACAAT
TGATTGACGAACACCTTACACCAGAGAG---CAGG----------AGTATATGAGATGAGATGGCGCAGAAAGCACAATC
GATGATCAAATCGCAGTAAAGTAAAGAAAGCACAATCAAGACCAGAATGGATTCAAAAGCATGGAGCGACCTCGGTCGGC
GATG---GCACGTAGGTAGCC------TAGCGTTGTCTGCGGATCGCGCAGGCGGAGAGGAGGACGAGGACGATGAAGAC
GAGGACGGCGAGGAAGGAGGCGACGACGGCGCCGCTGGTGCGCTGGCAGAAGCCGTGGAACTGCATGCAGATGGGCGCCC
AGTTGGCGCGCCGGCTCCCCTCGTGCGCCACGTACACGATGGCCGCCGCCGCAGACGCAGCGGCCGTCACCAGCACCACC
ATGACCGTGTCGCAGACGAGCAGCAGCAGCCTGATGCCGGTCGCCTTGGGCCGGATGATGCCGACGATGGAGAAGGGGAG
CGACAGCACCAGGTACCCCGCGGCGACGGCGTTGGCGACCATGAAGAAGGTGAAGGCCGGGAAGTCGTCGAACCTGGCAC
GGAACTGGAAGAACTCGGTGAAGACGGAGAGCGTCTCGTCGGAGGTGCCCGTGGAGATGGCGGCCGCGAGCGTGGGCCCG
AAGGCCGCCACCCTGAGCAGCAGGTCCACGAAGGCCATGCAGCGACGGAAGCCCTCGGCGCCGCTGCGCAGGATG
>chr7B_869
TTTCTA--------------------------------------------------------------------------
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-------------------------------------------------------------------------ATATTTG
CAGATAACCCCGACAACCTGTGTAACAGAATTAGTGGCGGGAAGAAAGCTAAGCTAACAGAC-GGGAAGGATAAGCAAGC
AGTCCATGGCCACAGGAGTCGGAAGCCATCAGCGCACCAGCCATGCAACAACCGCAGCTGCAGCCCCGCCTCCGCGCGCG
CGCTTTCCTCCACGCCACCGTCAAGCTCAGCCCGAGGAGGAACCCGTTCCTCCTGCGCCGTCCCGCCGCGTCCGCCGGCG
GCGCCGTCGCGGGCGTCCAGCTGACTGTGTCGGACTCCGAGCTGTCGTCCCGGGGCTTCGCGGTGCGGCGCACCGCGGAG
GGCCTTGACGTGGCGGCGCTGAACGAGGTGTTCGCGCGCGTGGGGTTCCCTCGGCGGCAGGAGGAGCGGCTCCGGCGCGC
GCTGGAGCACAGCGAGGTGGCGTGGCTGGCGTCGGAGGCGACGGGGCGCCCCGTGGCGTTCGCGCGCGCGGCCGGCGACG
GGGTGTTCAACGCGGTGGTGTGGGACGTGGTGGTGGAGCCGTCGTGCCAGGGCCTCGGGCTCGGCCGCGCCGTCATGGAG
CGCCTCGTGGCGGAGCTCCGGCGCAAGGGCGTCGGCAACATCGTGCTCTACGCGGAGCCCAGGGTGGTCGGGTTCTACCG
CCCGCTGGGATTCGCCATGGACCCCGACGGCATCCGGGGCATGGCATACTACCGCAGCAAGCAAAACCAGAAGCAACAGT
GATCTA--------TACTGCCATCATCATTC-------ATCCATGCATCTCTGCTTTGCATTTCTTTCTTTCTTTCTTTC
TTTCTTTTTCGTTTGTTCTGCCAGCTGATGGGATGGAGACAGATCGGAAATGTTGAAATTGATCGATACACTTGACACTG
CTGCATTGCAGAGTACATGAGTATAT--GAGATGGATCATGGAACTGACCATCTGAATTTCTCTCTTGTTTGCTTGCTTC
CCGCTGGAAATCGAAAATGTTCAAATTGATTA--ACCAATACACTTACATAGTTACATTCCACAGTGATCGACGAACAAT
TGATTGACGAACACCTTACACCAGAAGAGAAAGAACACAGGAGTAAGTATATGACATGGCGCAATTCACTCATGAGC---
-ATGACCAAATCAAAGTAAAGTAGAGAAAGCACAATCAAGACCGGAATGGATTCGGAAGCATCGAGCGACCTCGGTCGGT
GATGATGGCACGTAG------GTAGCCTAGCGTTGCCTGCGGATTGCGCAGGCGGAGAGGAGGACGAGGAGGATGAAGAC
GAGGACGGCGAGGAAGGAGGCGACGACGGCGCCGCTGGTGCGCTGGCAGAAGCCGTGGAACTGCATGCAGATGGGAACCC
AGTTGGCGCGCCGGCTCCCTTCGTGCGCCACGTACACGATGGCCGCCGCCGCAGACGCAGCCGCGGTCACCAGCACCACC
ATCACCGTGTCGCAGACGAGCAGCAGCAGCCTGACGCCGGTCGCCTTTGGCCGGATGATCCCGACGATGGAGAAGGGGAG
GGACAGCACCAGGTACCCCGCCGCGACGGCGTTGGCGACCATGAAGAAGGTGAAGGCCGGGAAGTCGTCGAACCTGGCAC
GGAACTGGAAGAACTCGGTGAAGACGGAGAGCGTTTCGTCGGAGGTGCCCGTGGAGATGGCAGCCGCGAGCGTGGGCCCG
AAGGCCACCACCCTGAGCAGCAGGTCCACGAAGGCCATGCAGCGACGGAAGCCCTCGGCGCCGCTGCGCAGGATG
>SNPs
S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S-
-----S-S-----S--S---S--S---------------------------SSS--------------------------
----------------S---------------------------------------------------------------
-----------------------------S-------S----------------------S-------------------
-------------------------------------------------------------S------------------
---------------------------------------------------------------------------S----
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--------------------------------------------S-----------------------------------
---------S-----------------------------------S----------------------------------
-----SSSSSSSSS-----------S-----SSSSSSS-----------------S------------------------
-----------S-----S------S----S--------------------------------------------------
-----S---S----------------------------------------------------------------------
--S----------S----------------S-SS-----------------------------S----------------
----------------------------SS-----------------------------S--------------------
--S--------------S-----------------S-----------S--------------------------------
--------------------------------S-----------------------------------------------
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---------------------------------------------------------------------S----------
--------------------------------------------------------------S-----------------
------------------------------------------------------------------------------S-
-----------S--------------------------------------------------------------------
--------------------------------------------S------------------------------
>forward_97
-----------------------------------------------------------------------------GGA
GTGTTGTACGCCTAGCA---------------------------------------------------------------
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>reverse_1698
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-----------------ATGCCAGGTGATTGGATGGA-------------------------------------------
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