>input_sequence_74561
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-----------ATGGCCAGCTTC-ACGGAAGAAC---CGTCGTTCTGGTGCCATGGGTGCAGACGCCTCCACCAGACCCG
CGCCGGCGAAGCCGTCTCGGCATGCCCCGTCTGCGCACCGGCCCCCGAAGCCTACGTCGAGAGCATCGTCGACGTCGTGG
ACGAAAGAACGTTCCTCCGTGGCGGCCAGCCGGAGGACCGGCCCGCCGTCGCCCACGCCGAGCCGCTGCCCCTCGTCACG
GTCCGCCAAGCGGGGCTCGCGTGCCCGATCTGCCTGGACGAGCTGGAGCCCGGCGCCCACGCGGCCGAGACGCCGTGCCA
GCACGTGTACCATCCGGCCTGCCTCGCCACGTGGCTCGGGGCCAGAGGCACCTGCCCGGTCTGCCGCTGCAGGTTCGCCG
CCGAGGACCACGCGGCCGGCTCCCCGGACGGCCTTATCCTGTGCGACCTGCGGAACGGACGCTTTGCCCTCGGCCGGCGT
ACCGCCGGGGATTGCTTGCGGATGGTCGGGATCCTCGACGAGGTCGGCATGCTCGTGCAGCATCCCAGCCCGCCGCTCAA
CCGCGGGCAGCGTGTCGGCTTGATGCGCTGGTTCAGGGCAAT----GCGCGCCAGGTAA---------------------
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>chr5B_1_TraesCS5B01G522800
TATTCTTGCTGTCCAAAATTAGTCATGTGCTTGCTGTCC-AATTAGTTGTTTGTGGCTGTGATATTCCTGTTGTTTCAGT
CCAAAATTATGTGAAGAAACTTATCTGAAAACTGTAGTGATCAATGTTTGTGCATGTGATTTTTGTGATATTGTTCCTCT
CAAAATCATTTGTTTTGATGTCCAAAATACAAATAAAATGCTGTTCAAATTTAGTTATGACATACTAGTCATTATA-AGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTGTGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAAAGCACTCACAGGGACAGCTACAGTCTAAATACGTCCAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGCTGT---------TAAACCGAGTCCCAGCCATCGGTCCCGTTCGGTCCAGTCGGGCTGACCGAGCTTTGCTCCTCTCG
ATCCGGTCCTGGAAATTTGGCTCGCTGGCCACCTCGGTCCGGTCCGGACCGGAC------CGGCCGGTCCAAAGGCTGGC
TCGGTCAAAGCCCGGACCGGACCGGACCGCGTCCACCCTGAGGTAATTGGATGTGAGTTAGGCACACTACCTCAACCATT
GAGATCCAGGGGCCCTCTAAACGCCAGGTTTTGGTCTGATTTTGCCATGCGGCTCTCAACTCGAGGACGAACAGAGGAGG
GGATCGGGGGCAAGAGAAGGAGTCGAGATGAATGTGTATTGGATGGCACGGGTAAGGTACATATTATTCCGCATCCTTTT
TTTTTCAGGGATGGACCGATGAATACGTGTTCAATCCTAACTAAC-----TACCAGGAGTACCAGAAAAGGGAGCCAGAC
TCCGACCGGAAACTGAACACGGAACGGTTCGCAATAAATCACTACGTGCTGCAATCGTACACCGAGCCACCGCGCCACGC
CCATATAGC-----------------------------ACGTCGACTAATACGACAGGCGATCAGATAGCACGTCGATCA
AATTGGCGTCGATGGCCAGCTTC-ACGGAAGAAC---CGTCGTTCTGGTGCCATGGGTGCAGACGCCTCCACCAGACCCG
CGCCGGCGAAGCCGTCTCGGCATGCCCCGTCTGCGCACCGGCCCCCGAAGCCTACGTCGAGAGCATCGTCGACGTCGTGG
ACGAAAGAACGTTCCTCCGTGGCGGCCAGCCGGAGGACCGGCCCGCCGTCGCCCACGCCGAGCCGCTGCCCCTCGTCACG
GTCCGCCAAGCGGGGCTCGCGTGCCCGATCTGCCTGGACGAGCTGGAGCCCGGCGCCCACGCGGCCGAGACGCCGTGCCA
GCACGTGTACCATCCGGCCTGCCTCGCCACGTGGCTCGGGGCCAGAGGCACCTGCCCGGTCTGCCGCTGCAGGTTCGCCG
CCGAGGACCACGCGGCCGGCTCCCCGGACGGCCTTATCCTGTGCGACCTGCGGAACGGACGCTTTGCCCTCGGCCGGCGT
ACCGCCGGGGATTGCTTGCGGATGGTCGGGATCCTCGACGAGGTCGGCATGCTCGTGCAGCATCCCAGCCCGCCGCTCAA
CCGCGGGCAGCGTGTCGGCTTGATGCGCTGGTTCAGGGCAAT----GCGCGCCAGGTAAGGCGGC--CGCGCGAGAGCGC
CGTTGCGCCGGGAGAACGTGCTAGCCGGATGATATTGCAACCTGTAGTTTGGCAGTAGCGTTTTTTTTTTTTTTGAAACG
GATGCAAAAGATTTGCCGCTTCTACTATTAAATAAGGGAGAAGAAAGTTTGAAGTTTTACAAAAACACCCACATATCGAA
AAAGGCTTTCGCCCCGCTTTATATATAAAGCATAGACCAACAATGCCCGATACAACCGCACTCACCCACCGCACACG---
-CACACACGCACCCAAGGCTGGGTACATAGGCGCTGAGCGCAGCAACACACTCCCTAGCAGTACAAGAACCGCCGGGGAC
TTCAGCCGTGAA---CACCGCGAAGAAGTGAAGCCGCATATGACGAATCGTGGGCTCCAAGGCGGCGCCTTCAAGAAGGA
TACGACACCGAAGTGCCGCCACCGCCCGATCCAAGGATCAGAGTTTTTCCTGGAGCAACACGACGGGCAATGATAGCCGC
AACGACGCCTTCAAGAAGGGAGCGATCTTCGCCGTCGCCAGTCCGTCCGAAGATAGAGTAAGTTTTCACCCCGGCCAATA
CTCACCGCCACCGAACGCCACACCCTGGCTACCACGCCGCCCACACGGCCGTGGCAGCCGGGCAGCACCGAGGCATGAGC
TCTGCCCATGAGCACCGC-GCCACCACCACCAGGGTCGCCGCCCCGGAGACCAAGACCTTGACACCAAGTCCTCCGAGCC
AGGGGTGCGAAAGGCGGATCCTTTCCGCTCGTTTCTGCGGTTGGGTTAGAGCACCCACATACACGGCATGGCAATTACTC
GTGCAAAAAAAGAATCCTAGTCTTTTAGCACCGGCAGTAATCTAGGCTCGCTGGTACTACAACACCAGCTACCAGCACTT
CTTGGAGGAATTTTATGCTCATTTTGGGAAATTGTAATTGGGGGTTGTGTATATGTCATGCACTCATGTGACTGAATCCT
TGTGCATTTTTGATAACCTTTTCATTTGC
>chr1B_1
TATTCTTGCTGTCCAAAATTAGTCATGTGCTTGTTGTCC-AATTAGTTGTTTGTGGCTGTGATATTCCTGTTGTTTCAGT
CCAAAATTATGTGAAGAAACTTATCTGAAAACTGTAGTGATCAATGTTTGTGCATGTGATTTTTGTGATATTGTTCCTCT
CAAAATCATTTGTTTTGATGTCCAAAATACAAATAAAATGCTGTTCAAATTTAGTTATGACATACTAGTCATTATA-AGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTGTGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAAAGCACTCACAGGGACAGCTACAGTCTAAATACGTCCAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGCTGT---------TAAACCGAGTCCCAGCCATCGGTCCCGTTCGGTCCAGTCGGGCTGACCGAGCTTTGCTCCTCTCG
GTCCGGTCCTGGAAATTTGGCTCGCTGGCCACCTCGGTCCGGTCCGGACCGGACCGGCCGCGGCCGGTCCAAAGGCTGGC
TCGGTCAAAGCCCGGACCGGACCGGACCGCGTCCACCCTGAG--------------------------------------
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>chr2B_1
TATTCTTGCTGTCCAAAATTAGTCATGTGCTTGCTGTCC-AATTAGTTGTTTGTGGCTGTGATATTCCTGTTGTTTCGGT
CCAAAATTATGTGAAGAAACTTATCTGAAAACTGTAGTGATCAATGTTTGTGCATGTGATTTTTGTGATATTGTTCCTCT
CAAAATCATTTGTTTTGATGTCCAAAATACAAATAAAATGCTGTTCAAATTTAGTTATGACATACTAGTCATTATA-AGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTGTGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAAAGCACTCACAGGGACAGCTACAGTCTAAATACGTCCAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGCTGT---------TAAACCGAGTCCCAGCCATCGGTCCCGTTAGGTCCAGTCGGGCTGACCGAGCTTTGCTCCTCTCG
GTCCGGTCCTGGAAATTTGGCTCGCTGGCCACCTCGGTCCGGTCCGGACCGGACCGGCCGCGGCCAGTCCAAAGGCTGGC
TCGGTCAAAGCCCGGACCGGACCGGACCGCGTCCACCCTGAG--------------------------------------
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>chr4B_1
TATTCTTGCTGTCCAAAATTAGTCATGTGCTTGCTGTCC-AATTAGTTGTTTGTGGCTGTGATATTCCTGTTGTTTCGGT
CCAAAATTATGTGAAGAAACTTATCTGAAAACTGTAGTGATCAATGTTTGTGCATTTGATTTTTGTGATATTGTTCCTCT
CAAAATCATTTGTTTTGATGTCCAAAATACAAATAAAATGTTGTTCAAATTTAGTTATGACATACTAGTCATTATA-AGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTGTGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAAAGCACTCACAGGGACAGCTACAGTCTAAATACGTCCAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGCTGT---------TAAATCGAGTCCCAGCCATCGGTCCCGTTCGGTCCAGTCGGGCTGACCGAGCTTTGCTCCTCTCG
GTCCGGTCCTAGAAATTTGGCTCGCTGGCCACCTCGGTCCGGTCCGGACCGGACCGGCCGCGGCCGGTCCAAAGGCTGGC
TCGATCAAAGCCCGGACCGGACCGGACCGCGTCCACCCTGAG--------------------------------------
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>chr2A_1
TATTCTTGCTGTCCAAAATTAGTCATGTGCTTGCTGTCC-AATTAGTTGTTTGTGGTTGTGATATTCCTGTTGTTTCGGT
CCAAAATTATGTGAAGAAACTTATCTGAAAACTGTAGTGATCAATGTTTGTGCATGTGATTTTTGTGATATTGTTCCTCT
CAAAATCATTTGTTTTGATGTCCAAAATACAAATAAAATGTTGTTCAAATTTAGTTATGACATACTAGTCATTATA-AGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTATGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAAAGCACTCACAGGGACAGCTACAGTCTAAATACGTCCAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGCTGT---------TAAACCGAGTCCCAGCCATCGGTCCCGTTCGGTCCAGTCGGGCTGACCGAGCTTTGCTCCTCTCG
GTCCAGTCCTGGAAATTTGGCTCGCTGGCCACCTCGGTCAGGTCCGGACCGGACCGGCCGCGGCCGGTCCAAAGGCTGGC
TCGGTCAAAGCCCGGACCGGACCGGACCGCGTCCACCCTGAG--------------------------------------
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>chr3B_1
TATTCTTGCTGTCCAAATTTAGTCCAGTGCTTGCTGTCCAAATTAGTTGTTTGTGGCTGTGATATTCCTGCTGTTTCGGT
CCAAAATTATCTGAAGAAACTTGTCTGAAAACTGTAGTGATCAATGTTTGTGTATGTGATTTTTGTGATATTATTCCTCT
CAAAATCAATTGTTTTGATGTCCAAAATACAAATAAAATGCTGTCCAAATTTAGTTATGCCATACTAGTCATTATACAGA
AACAGAGCACTCACTAAATTTGGACAGCCTAAATTGTGGCCAAAAAGCGCAACAGGGCACTGCTAAATAATGGCCAAAAC
GCTTAATAGAGCACTCCCAGGGACAGCTACGGTCTAAATACGTCAAAACAGCCTAAACAGTGGCCAACAAAGCACTCCCA
GGTTGGAAAACAGCCTAAACAGAGTCACAGCCATCGGTCCCATTCGGTCCATTCGGGCTGACCGAGCTTTGCTCCTCTCG
GTCAAGTCCTGGATAGTAGGCTCGCTGGACACCTCGGTCCGGTCCGGACCGGACCGGCCGCGGCTGGTCCAAAGGCTGGC
TCGGTCAAAGCCCGGATCGGACCGGACCGCGTCCACCCTGA---------------------------------------
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>chr4A_810
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--------------------------GTGTTCAATCCTAACTACTCTTAGTACAAGGAGTACCAGAAAAAGGAGCCCGAC
TCCGACCGGTAACGGAACACGGAACGGTCCGCATAAATA-ACTACGTGCTGCAATCGTACACCGATACACCGCGCCACGT
CCACATAATCCACCACAGTTAGCAGCTGGATCCAATCAACCTCAACTAATACGACAGGCGATCAGATAGCACGCCGATCA
AATTGGCGTCGATGGCCAGCTTCAATGGAAGAAC---CGCCGTTCTGGTGCCATAGGTGCAGACGCCTCCACCAGACCCG
CGCCGGCGGAGCCGTCCCGGCGTGCCCCGTCTGCGCACACGTCCCCGAAGCCTACGTCGAGAGCATAGTCGACGTCGTGG
ACGAAATAACCTTCCTCGAGGTCGGCCAGCCGAAGGACCCGCCCGCCAGCGCCCACGCCAAGCCGCTCCCCCTCGTTACC
GTCCGCGAAGCGGGGCTGACATGCCCGATCTGCCTGGACGAGCTGGAGCCCGGCGCCCACGCGGGCGAGACGCCGTGCCA
GCACGTGTACCATCCGGCCTGCCTCGCGACGTGGCTCGGGGC-----GCACCTGCCCGGTCTGCCGCTGCAAGTTCGCCG
CCGAGGACGACGCGGCCGGCTCCCCGGACGGCCTTATCCTGTTGGACCTGCAGAACGGACGCTTTCTCCTCGGCCGGCGT
ACCGCCGGGGATTGCTTGCGGATGGTCGGGATCCTGGACGAGGTCGGCACGCTCGTGCAGCATCCCAGCCCGCCGCTCAA
CCGCGGGTGTCGTGTCAGCTTGATGCGCTGGTTCAGGGCAAT----GCGCGCCAGGTAAGGCGGC--CGCGCGAGAGCGC
CGTTGCGCCGGGAGAACGTGCTAGCCTGATGATAATGCAACCTGTAGTTTCGCAGTAGCCTT------------------
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>chr5D_830
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---------------------------------------------------ACAAGGAGTATCAGAAAAAGGAGCCCGAC
TCCGACCGGTAACTGAACACGGAACGGTCCGCATAAATA-ACTACGTGCTGCAATCGTACACCGAGCCACCGCGCCACGT
CCATATAATTCACCACAGTTAGCAGCTGGATCCAATCAACGTCAACTAATACGACTGGCGATCAGATAGCACGCCGATCA
AATTGGCGTCGATGGCCAGCTTC-ATGGAAGAAC---CGCCGTTCTGGTGCCATAGGTGCAGACGCCTCCACCAGACCCG
CGCCGGCGAAGCCGTCCCGGCGTGCCCCGTCTGCGCACACGGCCGCGAAGCCTACGTCGAGAGCATAGTCGACGTCGTGG
ACGAAATAACCTTCCTCGAGGTCGGCCAGCCGAAGGACCCGCCCGCCCGCGCCCACGCCAAGCCGCTCCCCCTCGTCACC
GTCCGCGAAGCCGGGTTCACTTGCCCGATCTGCCTGGACGAGCTGGAGCCCGGCGCCCACGCGGCCGAGACGCCGTGCCA
GCACGTGTACCATCCGGCCTGCCTCGCGACATGGCTCGGGGCCAGAGGCACCTGCCCGGTCTGCCGCTGCAAGTTCGCCG
CCGAGGAGGGCGCGGCTGGCTACCCGGACGGCCTTATCCTGTTGGACCTGCAGAACGGACGCTTTGCCCTCGGCCGGCGT
ACGGCCGGGGATTGCTTGCGGATGGTCGGGATCCTGGACGAGGTCGGCATGCTCGTGCAGCATCCCAGCCCGCCGCTCAA
CCGCGGGTGGCGTCTCGGCTTGCTGCGCTGGTTCAGGGCAATTCGTGCGCGCCATGCAAGGCGGCCGCGCGCGAGAGCGC
CGTTGCGCCGGGAGAACGTGTTAGCCTGATGATAATGCAACCTGTAGTTTCGCAGTAGC---------------------
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>chr3B_947
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--------C-----------------------------ACCTCCACTAATAC--CAGGCGATCAGGTAGCACGTTAATCA
ATCGG--GGCGATGGCCAGCGTG-ATGGAAGAAGTGTCGTCGTTCTGGTGCCATACGTGCAGCCGCCTCCACCAAACCAG
CGCCGGCGAAGCCGTCGCGGTGTGCCCCGTCTGCGCAGCCGCCCCCAGCGCCTCGCTCGAGAGCATCGTCGACGTCGTTG
ACGCCAGGACGTTCCTCGACGGCTGCCACCCGGCGGGCCGGACTGCCAGCGCCCTCGCCGAGACGCTGCCCCTCGTCACG
GTCCGTGACGCGGGGCTCACCTGCCCGATCTGCCTGGACGTGCTGGAGCCCGGCGCCAGCGCGGCCGAGACGCCGTGCCA
GCACGTGTACCACCCGGCCTGCCTCGCGCCGTGGCTCGAGGCCAGAGGCACCTGCCCGGTCTGCCGTGCCAAGCCCGTGC
CCGAGGAAGATGCGGATGGCTCTCCGGATGGCCTTGTCCTTTGGGATCAGCGGAACGGCCGCTCTGCCCTCGTCCGGCGA
ACTGCAGGGCGGCTC---CGCATGGTCGGGGTCCTCGACGAGGATGGCATGCTGATGAGGCATTGCAGCCCGCTGCCCTA
CCGCGCGC------------------------------------------------------------------------
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>chr1B_1773
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-------------------------------------------------------------------------TATCGAA
AAAGGCTTTTGCCCCACTTTATATACAAAACATAGACCAACAGTGCCCGATACAACCGCACTCACCCACCACACACG---
---CACACACACCCAAGGCTGGATACATAGGCGCTGAGCGCAACGACAAACCCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCATGAA---CACCGCGAAGAAGTGAAGCCGCATATGACGAACC-TGGGCTCCAAGGCGACGCCTTCAAGAAGGA
TACGACACTGGAGCGCCGCCACCGCCCGATCCAAGGATCAGAGTTTCCCCTGGAGCAACACGACGGGCAATGATAGTCGC
AACGACGCCTTCAAGAAGGGAGCGATCCTCGCTGTCGCCAGTCCGTCCGAAGATAGAGTAGATTTTCACCCCGGCCAATA
CTCACTGCCACCGAACGCCACACCCC-GCTACCACGCCGCCCACACGGCCGTGGCAACCGGGCAGCACCGAGGCACGAGC
TCCGCCCATGAACACCTCGGCCACCACCACCAGGCCCGCCGCCCCGGAGACCAAGACCTTGACACCAAGTCCCCCGAGCC
--------------------------------------------------------------------------------
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>chr7B_1773
TAC-----------------------------------------------------------------------------
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----------------------------------------------------------------------------CGAA
AAAGGCTTTCGCCCCGCTTTATATATAAAGCATAGACCAACAGTGCCTGATACAACTGCACTCACCCACCACACACGCA-
-CACACACACACCCAAGGCTGGATACATAGGCGCTGAGCGCAGCAACACACTCCCTAGCACTATAAGAGCCGCCGGGGGC
TTCAGCCGTGAA---CACTGCGAAGAAGTGAAGCCGCATATGGCGAACCGTGGGCTCCAAGGCGGCGCCTTCAAGAAGGA
TACGACACTGGAGCGCCGCCACCGCCCGATCCAAGGATCAGAGTTTCCCCTGGAGCAACACGATGGGCAATGATAGCCGC
AACCACGCCTTCAAGAAGGGAGCGATCTTCGCCGTCGCCAAACCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAATA
CTCACCGCCAACGAACGCCACACCCCGGCTACCACGCCGCCCACACAGCCGTGGCAGCCGGGCAGCACCGAGGCACGAGC
TCTGCCCATGAGCACCGCCACCACCACCACCAGGGCCGCCGCCCAGGAGACCAAGACCTTGACACCAAGTCCCCCGAGCC
--------------------------------------------------------------------------------
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>chr3D_1773
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-------------------------------------------------------------------------TATCGAA
AAAGGCTTTCGCCCCGCTTTATATATAAATCATAGACCAACAGTGCCCAGTACAACCACACGCACCCACCACAAACG---
---CACACACACCCAAGGCAGGATACATAGGCGCTGAGCGCAGCAACACATTCCCTAGCACTACACGAGCCGCCGGGAGC
TTCATCCGTGGA---CACCGCGAAGAAGTGAAGCCGCATATGACGAACCGTGGGCTCCAAGGCGGCGCCTTCAGGAAGGA
TACGGCACCGGAGCGCCGCCACCGCCCGATCCGAGGATCAGAGTTTCCCCTGGAGCAACACGATGGGCAGTGATAGCCGC
GACGACGCCTTCAAGAAGGGAGCGATCTTCGCCGTCGCCAGTCCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAACA
CACACCGCCACCGAACGCCACACCCCGGCTACCACGCCGCCCACACGACCGTGGCAGCCGGGCAGCACCGAGGCACGAGC
TCTGCCCATGAGCACCGC-GCCACCACCACCAGGGCCGCCGCCCCGGAATCCAAGACCTTGACACCAAGTCCTCCGAGCC
--------------------------------------------------------------------------------
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>chr2B_1776
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----------------------------------------------------------------------------CGAA
AAAGGCTTTCGCCCCGTTTTATATATAAAGCATAGATCAACAGTGCCCGATACAACCGCACTCACCCACCACACACGCGC
GCGCACACACACCCAAGGCTGGATATATAGGCGCTGAGCGCAGCAACACACTCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCGTGAA---CACCGCAAAGAAGTGAAGCCGCATATGACGAACCATGGGCTCCAAGGCGGCGCCTTCAAGAAGGA
TACGACACTAGAGCGCCGCCACCGCCCGGTCCAAGGATCAGAGTTTTCCCTGGAGCAACACGACGAGCAATGATAGCCGC
AACGACGCCTTCAAGAAGGGAGCGATCTTTGCCGCCGCCAGTCCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAATA
CTCACCGCCACTGAATGCTACACCCCGGCTACCACGCCGCCCACACGGCCGTGGCAGCCGGGCAGCACCGAGGCACGAGC
TCTGCCCATGAGCACAGC-GCCACCACCACCAGGGCCGCCGCCCCGGAGACCAAGACCTTGACACCAAGCCCCCAAGCC-
--------------------------------------------------------------------------------
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-----------------------------
>chr3B_1776
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----------------------------------------------------------------------------CGAA
AAAGGCTTTCGCCCCACTTTATATATAAAGCATAGACCAACAGTGCCCGATACAACCGCACTCACCCAGCACACACAT--
----ACACACACCCAAGGCTGGATACATAGGCGCTGAGCGCAGCAACACACGCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCGTGAA---CACCGCGAAGAAGTGAAGCCGTATATGACGAATCGTGGGCTTCAAGGTGGCGCCTTCAAAAAGGA
TATGACACCGGAGTGCCGCCATCGCCCATTCCAAGGATCAGAGTTTCCCCTGGAGCAACACGACGGGCAATGATAACCGC
AACGACGCCTTCAAGAAGGGAGCGATCTTCACCGTCGCCAATCCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAATA
CTCACCGCCACCGAACGCCACACCCCGGCTACCACGCCACCCACACGGCCGTGGCAGCCGGGCAACACCGAGGCACGAGC
TCTGCCCATGAGCACCGC-TCCGCCAACACCAGGGCCGCCACCCCGGAGACCAAGACCTTGACACCAAGTCCCCCGAGCC
--------------------------------------------------------------------------------
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-----------------------------
>chr2D_1776
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CGAA
AAAGGCTTTCGCCCCGCTTTATATATAAAGCATAGACCAACAGTGCCCAGTACAACCGCACGCACCCACCACAAACG---
-CACACACACACCCAAGGCAGGATACATAGGCGCTGAGCGCAGCAACACACTCCCTAGCACTACACGAGCCGCCGGGAGC
TTCATCCGTGGA---CACCGCGAAGAAGTGAAGCCGCATATGACGAACCGTGGGCTCCAAGGCGGCGCCTTCAGGAAGGA
TACGGCACCGGAGCGCCGCCACCGCCCGATCCGAGGATCAGAGTTTCCCCTGGAGCAACACGATGGGCAGTGATAGCCGC
GACGACGCCTTCAAGAAGGGCGCGATCTTCGCCGTCGCCAGTCCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAACA
CACACCGCCACCGAACGCCACACCCCGGCTACCACGCCGCCCACACGGCCGTGGCAGCCGGGCAGCACCGAGGCACGAGC
TCTGCCCATGAGCACCGC-GCCACCACCACCAGGGCCGCCGCCCCAGAATCCAAGACCTTGACACCAAGTCCTCCGAGCC
--------------------------------------------------------------------------------
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-----------------------------
>chr3D_1776
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----------------------------------------------------------------------------CGAA
AAAGGTTTTCGCCTCGCTTTATATATAAAGCATAGATCAACAGTGTCCGATACAACCGCACTCACCCACCACAAACG---
-CGCACACACACCCAAGGCAGAATACATAGGCGTTGAGCGCAACAACACACTCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCGTGAA---CACCGCGAAGAAGTGAAGCCGCATATGACGAACCGTGGGCTCCAAGGCGGCGCCTTCAAGAAGGA
TACGACACCGGAGCGCCGCCACCGCCCGATCCGAGGATCAGAGTTTCCCCTGGAGCAACACGATGGGCAATGATAGCCGC
GACGACGCCTTCAAGAAGGGAGCGATCTTGGCCGTCGCAAGTCCGTCCGAAGATAGAGTAGGTTTTCGCCCCGGCCAATA
CTCACCGCCACCGAACGCCACACCCCGGCTACCACGCCGCCCACATGGCCATGGTAGCCGGGCAGCACCGAGGCACGAGC
TCTGCCCATGAGCACCGC-GTCACCACCACCAGGGCCACCGCCCCGGAGACCAAGACCATGACACCAAGACCCCGAGCC-
--------------------------------------------------------------------------------
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-----------------------------
>chr3B_1778
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------------------------------------------------------------------------------AA
AAAGGCTTTCGTCCCGCTTTATATATAAAGCATAGACCAACAGTGCCCGATACAACCGCACTCACCCACCACAAACG---
---CACACACACACAAGGCAGGATACATAGGCGCTGAGCGCTGCAACACACTCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCGTGAA---CACCACGAAGAAGTGAAGCCGCATATGACGAACCGTGGGCTCCAAGGTGGCGCCTTCAAGAAGGA
TACGACACCGGAGCGCCGCCACCACCCGATCCAAGGACCAGAGTTTCCCCTAGAGCAACACGACGAGCAATGATAGCCGC
GACGACGCCTTCAAGAAGGGAGCGATCTTCGCCGTCGCCAGTCCGTCCGAAGATAGAGTAGGTTTTTACCCCGGCCAATA
CTCACCGCCACCGAACGCCACACCCCGGCTACCACGCCGCCCGCACGGCCATGGCAGCCGGGCAGCACCAAGGCACGAGC
TCTGCCCATGAGCGCT-C-GCCACCACCACCAGGGCCGCCGCCCCGGAGACCAAGACCTTGACACCAAGTCCCCCGAGCC
--------------------------------------------------------------------------------
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-----------------------------
>chr4D_1778
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------------------------------------------------------------------------------AA
AAAGGCTTTCGCCCCGCTTTATATATAAAGCATAGACCAACAGTGCCTGATACAACCACACTCACCCAACACAAACG---
-CACACACACACCCAAGGCTGGATACATAGGCGCTGAGCGCAACAACACACTCCCTAGCACTACAAGAGCCGCCGGGGGC
TTCAGCCGTGAACACCACCGCGAAGAAGTGAAGCCGCATATGACGAACCGTGGGCTCCAAGGCGGCGCCTTCAAGAAGGA
TACGACACCGGAGCGCCGCCACCGCCCGATCCAAGGATCAGAGTTTCCCCTGGAGCAACACGACGGGCAATGATAGCCGC
GACGACGCTTTCAAGAAGGGAGCGATCTACGCCGTCGCCAGTCCGTCCGAAGATAGAGTAGGTTTTCACCCCGGCCAACC
CTCACCGCCACCGAACGCCACACCCCGGCTACCATGACGCCCACACGGCCGTGGCAACCGGGCAGCACCGAGGCACGAGC
TCTGCCCAGGAGCACTGT-GCCACCACCACCAGGGCCGCCGCCCCGGAACCCAAGACCTTGACACCACGTCCCCCGAGCC
--------------------------------------------------------------------------------
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-----------------------------
>SNPs
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--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-----------------SS--------S---------------S------S---
---------S------------------S----SS--SSS---------------------------------------S
-------S-----------------------------------S------------------------------------
-------------------------S----------------------------S-------------------------
----------------S----S-----------------S----------------------------------------
-----------------SSS---------------------------SS-------------------------------
------S-----------S-S-----------------------------------------------------------
---------------------------S-------------------------------------------S--------
--------S----------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------S-------S---------------S--------S--SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
------------------------------------------S---------------------------S---------
--------S-------------S-------------------------------------S-------S---------S-
--------------------------------------------------------------------------------
----------S------------------------------------S--------------------------------
------------------------------------------------------------S-------------------
-------------------------S-------------------------------------------------S----
-----------------------------------S--------------------------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAGATCCAGGGGCCCTCTAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2462
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CACGGCATGGCAATTACTC
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
