>input_sequence_74558
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----------------------------------------ATGAAGTGCTGGTGCACACATGCGCCCAAGGGAGCAATGG
CGACGCCGCTCTCCAGCCCTTTCTCCGTCCCCACCCTCCGCGCCCCGCTCTGGCACGGCCGCCTCCACGCG---------
---CCTCTCCGAGCAAGCTCCGGCGATGACGCCGCCGCCGGGCCGGAGACGCCGGCCCCGGTCGCCACCGCCCCCGCCGC
CGACGAGGAGTTCGAGAAGCGCGTCCTGCAGCTGAAGTCCCGCGTCGGGCCCAAGAAGCGGGGCAGCGCCGGGGCGCGCA
AGAGGAAGGCCGCCGCCGAGTCCAACGCCGTCACGCTGCCGCCGGTGCCGCTGCGGGAGCCGCGGTCCGCCCTCGGCCTG
CCCGTGGAGTTCGGCTTCACCGCCTACAGCGAGCGGCTCAACGGCCTGCTGGCCACGGTGGGCCTCACCGCGCTGCTGCT
GGTGGAGCTCGGCTCCGGCAAATCCCTGGTGAAGTACCACCAGGCGCCCACGCTGTTCCTGCAGGTGTACACGATCGTCG
CGGCCGGCACCGTGTACGTCAAGTACGAGAAGGAGCGGATCAGCGTCTGGCCGGCGCCGGCGCCGCCCAAGGCGCCGACG
AGCGGCGAATGA--------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G201800
CCCCGGAAACCGCCCCGGAGGGCATGCACACGATGATAGAAGGTCTAAAGGGGGTGAACTGACCGACTTGGTATTGATGC
TTGCATTTTTTAGATTATTTTAGACTTTTCGGTGAGCAGAAGATGTTCCTGCCAACCAACCTGTAGTTGAATGGTTAGAG
GGACAGTGGTATCCCCAGCCCACCAGGATTCAAGTACTACTGCTCGCATTATTCCTGGATTTATTTCAGAATTTCCAGCG
ATGCCCTTTCGGTGGGAGGAGACGTTCACGTCGACGACGAGGCGCCTACGGTGACTTCGTAAATCTCAAGATGATATGCC
GGCTCAGTCTTTCAGAGGTGCTCATAGGGGTAGGGTGTGCATATGTGCGTTCATATGGGCGAGTGTATGCACGTGTATAT
GAGTGCTTGTGTCCGTACTGATGTTCAAAAAAGAAAATTACTATGATTTATTTTTCTATAAGCACCTCCCTAAACAAAAC
AAACTTGAATCAACCTTTCTTTTTTATTTCAACATTCCTTTTTTCCTTTCGAGGATTTATATCAACATTCCTTCTTTTTT
GAAGTGTTATATCAACATTCCCTTTTTTAGACAATTTATATCAACATTCCTAAACACTTTGCCTCGTACAAGGCCTTACA
GCCCAGAAGAGAAGACCCATCAAAGTTTCGGACGGCCCCGAATTCTGTGCTAGATGTGGCCATCCTTGTCTAAAAAAAAA
GATGTGGCCATCCAGGATTGTAATTTGTCCCAAAAAAATTCTAGAAACACACCGATTTTCTGGTTATTATCTTTTCGCTC
CCAATTTTTCCCCCTCTTTTTTTTTGGCAAACCCCGATTTTCCTCTCGAGCAAACACTTGACACGCCTACAATTTCCATT
TTGCAACGTGCGGCAGCTTTCAAGGCCCCGTGCATGCACCGGAGCCACGCATCGACCACCGAAAGTTATCCAAAACCAGC
GGCAAACCAGGACGGGAGCCAACCAAGCAGCCGCGCGACCATGAAGTGCTGGTGCACACATGCGCCCAAGGGAGCAATGG
CGACGCCGCTCTCCAGCCCTTTCTCCGTCCCCACCCTCCGCGCCCCGCTCTGGCACGGCCGCCTCCACGCG---------
---CCTCTCCGAGCAAGCTCCGGCGATGACGCCGCCGCCGGGCCGGAGACGCCGGCCCCGGTCGCCACCGCCCCCGCCGC
CGACGAGGAGTTCGAGAAGCGCGTCCTGCAGCTGAAGTCCCGCGTCGGGCCCAAGAAGCGGGGCAGCGCCGGGGCGCGCA
AGAGGAAGGCCGCCGCCGAGTCCAACGCCGTCACGCTGCCGCCGGTGCCGCTGCGGGAGCCGCGGTCCGCCCTCGGCCTG
CCCGTGGAGTTCGGCTTCACCGCCTACAGCGAGCGGCTCAACGGCCTGCTGGCCACGGTGGGCCTCACCGCGCTGCTGCT
GGTGGAGCTCGGCTCCGGCAAATCCCTGGTGAAGTACCACCAGGCGCCCACGCTGTTCCTGCAGGTGTACACGATCGTCG
CGGCCGGCACCGTGTACGTCAAGTACGAGAAGGAGCGGATCAGCGTCTGGCCGGCGCCGGCGCCGCCCAAGGCGCCGACG
AGCGGCGAATGAGCTACTAGCTCTTCTTGGTTGATTTTGGTCTCGTCGGTAGGATGCTTCCATTTTGTAATTTATTACGT
ACGACCTCCTG--AGTTGCCGAGCTGAGCTGTGCTGTAAAAACTGAAATTGCTTAACCACGCGAGTTCAAAAAAAATACA
GAATGTTTTCTTACAGTCGCCTGACCTTTATTTTACTCCACTTCCAGAATTGTTTCATTTTTTTTAAGGGACACTTGTTT
CATTTTACTAGGTGAGATGAGATTGAATTTCTTTCGTGGATGGAAGTTCCCCACTGTGTTGAGAAGAAACTCTGTTGAGG
CTGCCGTGTGTAGCTAGCTGTTGAGATAATTTTGGGGGCATTGCTACCGAGATGTG-TGATGTGTACTTGCACTTGTAGA
TTTTCTTTCTCGGGTCGTCTTAAACAGGAGAATTTCCACGAAATGGACAAAAGTGGAGCCAAACAACAAACCGCTGCCGT
TGGTCCTCGTCCGAGACTGCGTTTGCTACGTGGACCATATTCTGCCCAACGCAGGGGACATCAATTATGTTGTGTGTCCT
GCTGCGTAGTCTACTCTTATCCACAGCTCCACCAC--------AAGAGCTGGGCATAATTTCCATGACCTGGCCCGCGCT
AAACAGGCGACCAACCAATGGCACGTCGTAT-GCGAGCAGCGCAGCCAATGATACGCATCGTCGCAACACAGTTTTTCCA
CATGGACAGATCACAGGTGGACTTGACTA--AC-----------GCATCCATCATGAGAAATTCCCAGCAGCA---GCTG
CTTACTTTTCCACTCC---ATAAGAAAAA--GGCAATGCCAAACACACTGCGGACTTTTATTCGATGCAAATTGCCCGGT
GGCGGTG---CAGGTCACACCCATTAATAAACAGTAGGTAAAAAGTCTGGTCCAAAGACAGCAACAAGTCCTAATTAAAC
CACATCCAAACCGGGTGG-----GTATGCGTACCGTACCGTATCCCATCTGCTTCTCCAGACCAACAACTAGGCAAATTA
TAGCGAAGACAAG
>chr4B_864
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---------------------------------------------------------------CGCCTACAATTTCCATT
TTGCAACGTGCGGCAGCTTTCAAGGCCCCGTGCAGGCAGCGGAGCCACGCATCGACCACCGAAAGTTATCCAAAACCAGC
GGCAAACCAGGAGGGGAGCCAGCCAAGCAGCCGCGCGACGATGAAGTGCTGGTGCACACATGCGCCCAAGGGAGCAATGG
CGACGCCGCTCTCCAGCCCCTTCTCCGTCCCCACCCTCCGCGCCCCGCTCTGGCACGGCCGCCTCCACGCG---------
---CCTCTCCGGGCAAGCTCCGGCGATGACGCCGCCGCCGGGCCGGAGACGCCGGCCCCGGTCGCCACCGCCCCCGCCGC
GGACGAGGAGTTCGAGAAGCGCGTCCTGCAGCTGAAGTCCCGCGTCGGGCCCAAGAAGCGGGGTAGCGCCGGGGCGCGCA
AGAGGAAGGCGGCCGCCGAGTCCAACGCCGTCACGCTGCCGCCGGTGCCGCTGCGGGAGCCCCGGTCGGCCCTCGGCCTG
CCCGTGGAGTTCGGCTTCACCGCCTACAGCGAGCGGCTCAACGGCCTGCTGGCCACGGTGGGCCTCACCGCGCTGCTGCT
GGTGGAGCTCGGCTCCGGCAAGTCCCTGGTGAAGTACCACCAGGCGCCCACGCTGTTCCTGCAGGTGTACACGATCGTCG
CGACCGGCACCGTGTACGTCAAGTACGAGAAGGAGCGGATCAGCGTCTGGCCGGCGCCGGCGCCGCCCAAGGCGCCGACG
AGCGGGGAATGAGCT------------TGGTTGGTTTTGGTCTCGTCGGTAGGATGCTTCCATTTTGTAATTTATTACGT
ACAACCTCCGG--AGTTGCCGAG-----CTGTGCTGTAAAAACTGAAATTGCTTAACCACGCGAGTTC-AAAAAAATACA
GAATGTTTACTTACAGTCGGCTGACCTTTTTTTAACTCCACTTCCAGAATTGTTTCGTTTTTTTTAAGGGACACTTGTTT
CATTTTACTAGGTGAGATGAGATTGAATTTCTTTCGTGGATGGAAGTTCCCCACTGTGTTGAGAAGAAACTCCGTCGAGG
CTGCCGTGTGTG----GCTGTTGAGATATTTTTTGGGGCATTGCTACCGAGATGTGG-GATGTGTACTTGCACTTGTAGA
TTTTCTTTCTCGGATCGTCTTAAACAGGAGAATTTCCACGAAATGGACAAAAGTGGAGCCAAACAACAAACCGCTGCCGT
TGGTCCTCGTCCGTGACTGCGTTTGCTACGTGGACCATATTCTGCCCAACGCAGGGGATATCAATGATGTCGTGTGT---
-CTGCGTGGTCTACTCTTATCCACAGCTCCACCAC--------ACCGTCCAAAG--AATTTCCATGGCGTGGCCCGCGCT
AAACAGGCGACCAACCAATGGCACCTCGTATA-CGAGCAGCGCAGCCAATGATACGCATCGTCGCAACACAGTTTTTCCA
CATCGCCAGATCACAGGTGGACTTGACTA--ACGCACAAGACGAGCATCCATCATGAGAAATTCCCAGCAGCTGCTGCTG
CTTACTTTTCCACTCCTCCATAAGAAAAA--GGCAATGCCAAACACAGTGCGGACTTTTATTCGATGCAAATTGCCC---
GGCGGTGGTGCAGGTCACACCCATTAATAAACAGTAGGTAAAAAGTCTGGTCCAAAGACAGCAACAAGTCCTAATTAAAC
CACATCCAAACCGGGTGGGTATTGTATGCGTACCGTACCGTATCCCATCTGCTTTTCCAGACCAACAACTAGGCAAATTA
TAGTGAAGACAAG
>chr4A_864
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---------------------------------------------------------------CGCCTACAATTTCCATT
TTGCAACGTGCGGCAGCTTTCAAGGCCCCGTGCATGCACCGGAGCCACGCATCGACCACCGAAAGTTATCCAAAACCAGC
GGCAAACCAGGAGGGGAGCCAAGCAAGCAGCCGCGCGACCATGAAGTGCTGGTGCACACATGCGCCCAAGGGAGCAATGG
CGACGCCGCTCTCCAGCCCCTTCTCCGTCACCACCCTCCGGGCCCCGCTCTGGCACGGCCGCCTCCACGCACCGCCGCTG
CCTCCCCTCCGCGCAAGCTCCGGCGATGACGCCGCCG---GGCCGGAGACGCCGGCCCCGGTCGCCACCGCCCCCGCCGC
CGACGAGGAGTTCGAGAAGCGCGTGCTGCAGCTGAAGTCCCGCGTCGGGCCCAAGAAGCGGGGCAGCGCCGGGGCGCGCA
AGAGGAAGGCCGCCGCCGAGTCCAACGCCGTCACGCTGCCGCCGGTGCCGCTGCGGGAGCCACGGTCGGCGCTTGGCCTG
CCCGTGGAGTTCGGCTTCACCGCCTACAGCGAGCGGCTCAACGGCCTGCTGGCCACGGTGGGCCTCACCGCGCTGCTACT
GGTGGAGCTCGGCTCCGGCAAGTCGCTGGTCAAGTACCACCAGGCGCCCACGCTGTTCCTGCAGGTGTACACGATCGTCG
CGGCGGGCACCGTGTACGTCAAGTACGAGAAGGAGCGGATCAGCGTCTGGCCGGCGCCGGCGCCGCCCAAGGCGCCGACG
AGCGGCGAATAAGCTACTGGCTCTTCTTGGTTGATTTTGGTCTCGTCCGTAGGATGCTTCCATTTTGTAATTTATT---T
ACAACCTCCTATAAGTTGCCGAG-----CAGTGCTGTAAAAACTGAAATTGCCTAACCACGCGAGTTCAAAAAAAT----
--ATGTTTTCTTACAATCGCCTGACCTTTTTTTTACCCCACTTCC-------------------------ACACTCGTTT
TCTTTTACTACGTGAGATGAGATTGAATTTCTTTCGTGGATGGAAGTTCCCCACTGT--TGAGAAGAAACTCTGTTGAGG
CTGCCGTGTGTA----GCTGTTGAGGTTATTTTTGGGGCATTGCTACCGAGATGTGATGATGTGTGCTTGCACTTGTAGA
TTTTCTCTCTCGGATCGTCTTAAACAGCAGAATTTCCACGAAATGGACAAACAAGGAGCCAAACAAA----CGCTGCCGT
TGGTCCTCGTCCGTGACTGCGTTTGCTACGCGGACCATATTCTGCCCAACGCAGGGGACATGAATGATGGTGTGTGT---
-CTGCGTAGTCTACTCTCATCCACAGCTCAACCACGCCATCCAAAGAGCTGGGCATAATTTCCACGGCCTGGCCCGCGCC
AAACAGGCGACCAGCCAATGGCACGTCGTATGGCGAGCAGCGCAACCAATGATACGCATCGTCGCAACACAGTTTTTCCA
CATGGACAGATCACAGGTGGACTTGACTATAACGCACAAGACGGGCATCCATCATGAG----------------CTGCTG
CTTACTTTTCCACTGCACCATTAGAAAAAAGGGCAATGCCGAACACACCGCGGACTTTTATTCGATGCAAATTGCCCGGT
GGCGGTGGTGCAGGTCACACCCATTAATAAACAGTAGGTAAAAAGTCTTGTCCAAAGACAGCAACAAGTCCTAATTAAAC
CACATCCAAACCGGGTGGGTATGCG---------GTACCGTATCCCATCTGCTTTTCCGGACCAACAACTAGGCAAACTA
TAGTGAAGACAAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
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------------S-------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------S--------------------------------------------------------------------
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---------------------S----------------------------------------------------------
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------------------S-------------------------------------------------------------
--S--------------------SSSSS----------------------------------------------------
-----------------------------S--------------------------S-----------------------
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------------SSSS-----------------S----------------------------------------------
-------------S------------------------------------------------------------------
-------------S---------------------------------------------------S-----------SSS
S-----------------------------------------------------------------S-------------
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------------------------------------------------------------------------S-------
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------------------------------------------------------S-------------------------
---S---------
>forward_195
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---------------CAGCCCACCAGGATTCAAGT---------------------------------------------
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>reverse_1683
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--GACCTCCTGAGTTGCCGAG-----------------------------------------------------------
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