>input_sequence_74521
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-------------------------------------------------------------------------------A
TGGCAGCTGTTATCTTGTCCAACACCCGGATTATGCCCACCAGTTATAACAAGACCATCATGAGCAACTTGTCCTTGCAC
CGTATCGCTAACGGGGCCGACACAAATCAAGCCACTGTGATCCAAAAGGATTACAAGTTTGGTCATACTGCTGTTAATGA
CTGGGTAATTTACGAAGGTGCAGGCCCAGGTCCGGTGTTCGCCCGTGGACAAGGCAGCCACATTCTTGCCGGCAACTCCA
TATCTACCATCATGATAACGTTCGAGGATCCAAGGTACAATGTTTTTAACTTTTTATGGCTTCGTTAATTAGGATATTTA
AT-AAATTATATATCCGTTCAACACATTCTAGATTGTTAATCTACATTATCAAAAGG--AATTATTTCTGTTTCTTATTT
TCATTTTCCACATGCACATAGGTACAAGGGCTCCAGCCTTGCTGTTATGGGCAACATCTTGGATAATGGTCAGTGGGCTA
TTGTTGGAGGGACTGGGTTATTTAAGTATGCAACTGGGTTCATTGACTTGGTTCCTGTTCAACAGTCGAGCCCCAAGAAC
ATTTCAAACATCACCATCGAAGTATGCAATCCAAACTATTGA--------------------------------------
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---------------------------------------------------
>chr1B_1_TraesCS1B01G015800
CTCTTCCTTGTATTTGGTGACAAGCATGTGACTGCTCATGTGGTGCATCAAACGTATCTGAAACAAAATTATCTTCCTAC
TTGCAAGTGGAAGTTTTGTAATGCCAGCGCACACTGTCTCAGATGGCTGTCGATGC------------------------
------------ATCGCTATTGGCAAGATTAAATATTTTCCTCGTGATTATATTGGTTTGAGAATCCGTCTCAGGCTGTG
TACGACCATTCTATATTGGAGAACTCAAACACTATACTCGTCTTGCTCACACCATTCTCTTCTCCGTTCTCCACTTCACT
AGTTTGTGTTTTCCAGTGCTGCGCGTGTGGTTCTT---AGCATTCCAATGGCGCCCTAGTGGCCACCATGGCTATCCGGC
CACTGGTCTACAATGCTGATGAGCAAGGTGTGTAGCTCCCTCCTAGACCAGTACAAGGTAATGGAGGGAATGGAGAAGCA
GCATAGGATTCCCAAGCGCAAGCTTCCAGCCATCATCAAAATGCCATCATCAAAATGGAGAAGCAGCATAGGATTCCCAA
GCGCAAGCTTCCAGGCATGTGCGAATCTTGATCGGATCAACAAATTTAACTACTAATTGTCACTAGTTGGACCCAATGCC
CTATTGTTGGTTGGTGGTGATGTGCTAACATTGTAAATGTAAAAGAAGCCTAATTGCATATAGCAGTTTTTTACGCAGCT
AGCCTGTTAGTCACCGACAGCGACAGTAATTAAACGTTGTTGTTTGGAGTAATTAAGTCTCTCTAAAACAGACTTACTAA
ATTAATTGATCCTCTGAACTCAGTGACTTTGAAGATGTGTTGCTCTTATCTAGTACCCAGTAGCCACATGATGCATTTGC
TGAGAGCTGATGCCTCTGGACGCAGTAAAGCACACACATAGCCAAGGCATAAGCACTCTATAAATAGACATGTGATTCCT
TTTGTTCCTCTCCACAGCCAAAAAGCAAGAGACATCCCAAGCACCTAGCTATTTCTTGCCCTCTCCTCTTCACACACTCA
TGGCAGCTGTTATCTTGTCCAACACCCGGATTATGCCCACCAGTTATAACAAGACCATCATGAGCAACTTGTCCTTGCAC
CGTATCGCTAACGGGGCCGACACAAATCAAGCCACTGTGATCCAAAAGGATTACAAGTTTGGTCATACTGCTGTTAATGA
CTGGGTAATTTACGAAGGTGCAGGCCCAGGTCCGGTGTTCGCCCGTGGACAAGGCAGCCACATTCTTGCCGGCAACTCCA
TATCTACCATCATGATAACGTTCGAGGATCCAAGGTACAATGTTTTTAACTTTTTATGGCTTCGTTAATTAGGATATTTA
AT-AAATTATATATCCGTTCAACACATTCTAGATTGTTAATCTACATTATCAAAAGG--AATTATTTCTGTTTCTTATTT
TCATTTTCCACATGCACATAGGTACAAGGGCTCCAGCCTTGCTGTTATGGGCAACATCTTGGATAATGGTCAGTGGGCTA
TTGTTGGAGGGACTGGGTTATTTAAGTATGCAACTGGGTTCATTGACTTGGTTCCTGTTCAACAGTCGAGCCCCAAGAAC
ATTTCAAACATCACCATCGAAGTATGCAATCCAAACTATTGATGCAAATAAGGTCAAATACGAACGTCATAACTATGTTT
CA----TCCATAATAAAGCAGACACCGGTTGTTCACATTTCCATGTACCAGTAATA-ATGACCCTTTTTAATGGTGGTGT
TTCAGTTTGTTCCCTTGTATTTTCTCTATTCTGGGTGAGTTTTTGTCTTGTACTAGATCCTTTTCAGGGTGGTACTTCCC
CTTTCCATGTATTATTAGCTATGTTGTGCGACAAATCAATAAAGTTCATTTGGTGGCAACCG-AACAAACTAGTATATTG
ATAGTATGTTACGGACCATCATGTTTCTACTATGGGCCAGGGCGATCTACATCAGGTCATTGTCTAGGTACTTATGTGAT
CCAGCGGACGAGCCGAATAATTGTCTTATATAAACCATTATCCATGTTGTGTTAATAGTCTTGACTGCATAAACTACTAC
AATAAATACATATGATTTCAGGCCTAGCAGGCACACAACCCGCATTCAAGCATTTCTTGAGGTGTACAAGAAAATTGAAG
ACTAGGTCTCCCATGATGAGCTATGTGAGGATCTCCTTGAGCATC----------------GAGATAGATGTGTTTACGT
TTCTTTCAATTTCATTTATTTTTATTTGGAAATTTTGTTTCATTGAATTTTTAGTTGTATTTTA----------------
--ATTATTTGTTATACTTGGATTAATG-TTTTTAATAATATTTGCTTAATTATTCAACTGTTTCATCTA-ATTGAAGTAT
AGAGTAGAAAAAAGAAAACATAAAAGAAT--GGAACACATATTACAGTGATTCTTTGTTTCCATGAAGCCTC-A-AAAAA
ATTATGGAGCATGCTCCATACACATTATGGAGGCTAGGAATATGGCCACTCTGCTAGAGTTACTAGTGATGTGACCCACC
GCATGCCACTCATCATTTCTTTTCGACATGCAACTGGTAACCATTTTGTT-AATAGTGTAACTCAGTAGCATTGTCAGGC
CTACAACCGCACATGGTGACACAAGAGACCT-GGGGCAGGG-CAGAGCCAG
>chr1B_2
-TCTTCCTTGTATTTGGTGACAAGCATGTGACTGATCACGTGATGCATCAAACGTATTTGAAACAAAATTAGCTTCCTGC
TTGCAAGTGGAAGTTTTGTAATGCCAGTGCACACTGTCTCAGATGGCTGTCGATGCGTCGGTGTGGCCATTTGATTCGTT
ATCAGAGCCTGCATCGCTATTGATAAGATTAAATATTTTCCTCATGATTATATTAGTTCGAGAAAACGTCTCAGGCTGTG
TACGACTATTGTATAACGGAGAACCCAAACACTATACTCGTCTTGCTCACTA------------------------CACT
AGCTTGTGTTTCCTAGTGCTGCGCATGTGGTTCTTTTGAGCATTCCAATGGCGGCCCTTCTTACGC--------------
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-------------------ATGTGCTAACATTGTAAATGCAAAAGAAGCCTAATTGCAAATCGCAGGTTTTTACGCAGCT
AGCCAGTTAGTCACCGACAGCGATAGTAATTAAACGCTGTTGTTTCGAGTAATTAAATCTCTCTAAAACAGGCTTACTAA
ATTAATTGATCCTCTGAACTCAGTGACTTTGATGATGTGTTGCTCTTATCTAGTACCCAGTAGCCACATGATGCATTTGC
TGAAGGCTGATGCCTCTGGACGCAGTAA-GCACACACATAGCCAAGACACAAGCACTCTATAAATAGACATGTGATTCCT
TTTGTTCCTCTCCACGGCCAAAAAGCAAGAGACATCCCAAGCACCTAGCTATTTCTTGCCCTGTCCTCTGCACACACTCA
TGGCCGCTGTTATCTTGTCCAACACCCAGGTTATGCCCACCAGTTATAACAAGACCATCATGAGCAACTTGTCCTTGCAC
CGTATCGGCAATGGGGCCGACACAAATCAAGCCACTGTGATCCAAAAGGATTACAAGTTTGGTCATACTGCTGTTAATGA
CTGGGTAATTTACGAAGGTGCAGGCCCAGGTCCGGTGTTCGCCCGTGGACAAGGCAGCCACATTCTTGCCGGCAACTCCA
TATCTACCATCGTGATAACATTCGAGGATCCAAGGTACAATGTTTTTAACTTTTTATGGCTTCGTTAATTAGGATATTTA
ACAAAATTATATATCCGTTCAACACATTCTAGATTGTTAATCTACATTATCAAAAGG--AATTATTTCTGTTTCTCATTT
TCATTTTCCACATGCACATAGGTACAAGGGCTCCAGCCTTGCTGTTATGGGCAACATCTTGGATAATGGTCAGTGGGCTA
TTGTTGGAGGGACTGGGTTATTTAAGTATGCAACTGGGTTCATTGACTTGGTTCCTGTTCAACAGTCGAGCCCCAAGAAC
ATTTCAAACATCACCATCGAAGTATGCAATCCAAACTATTGATGCAAATAAGGTCAAATACGAACGTCATAACTATGTTT
CA----TCCATAATAAAGCAGACACCGGTTGTTCACATTTCCATGTACCAGC---A-ATGACCCTTTTTAATGGTGGTGT
TTCAGTTTGTTCCCTTGTATTTTCTCTATTCTGGGTGAGTTTTTGTCTTGTACTAGATCCTTTTCAGGGTGGTACTTCCC
CTTTCCATGTATTA----CTATGTTGTGCGACAAATCAATAAAGTTCATTTGGTGGCAACCG-AACAAACTAGTATATTG
ATAGTATGTTACGGACCATCATGTTTCTACTATGGGCCAGGGCGATCTACATCAGGTCATTGTCTAGGTACTTATGTGAT
CCAGCGGACGAGCCGAATAATTGTCTTATATAAACCATTATCCATGTTGTGTTAATAGTCTTAACTGCATAAACTACTAC
AATAAATACATATGATTTCAGGCCTAGCTGGCACACAACCCGCATTCAAGCATTTCTTGAGGTGTACAAGAAAATTGAAG
ACTAGGTCTCCCATGATGAGCTATGTGAGGATCTCCTTGAGCATC----------------GAGATAGATGTGTTTACGT
TTCTTTCAATTTCATTTATTTTTATTTGGAAATTTTGTTTCAATGAATTATTAGTTGTATTTTA----------------
--ATTATTTGTTATACTTGGATTAATG-TTTTTAATAATATTTGCTAAATTATTCAACTGTTTCATCTAAATTGAAGTAT
AGACTAGAAAAAAGAAAACATAAAAGAAT--GGAACACGTATTACAGTGATTCTTTGTTTCCATGAAGCCTCAA-AAAAA
TTTATGGAGCATGCTCCATGCACATTATGGAGGCTAGGAATATGGCTACTCTGCTAGAGTTACTAGTGATGTGACCCACC
GCATGCCACTCATCATTTCTTTTCGACATGCAACTGGTAACCATTTTGTT-AATAGTGTAACTCAGTAGCATTGTCAGGC
CTACAACCGCACATGGTGACACAAGAGACCTGGGGGCAGGG-CAGAGCCAG
>chr1B_2
-TCTTCCTTGTATTTGGTGACAAGCATGTGACTGGTCACATGATGCATCAAACGTATTTGAAACAAAATTATCCTCCTGC
TTGCAAGTGGAATTTTTGTAATGCCAGTGCACACTGTCTCAGATGGCTGTCGATGCGTCGGTGTGGCCATTTGATTCGTT
ATCGGAGCCTGCATCGCTATTGGTAAGATTAAATATTTTCGTCGTGGTTATATTAGTTCGAGAAATCGTCTCAGGCTGTG
TACGAC-ATTGAATAACGGAGAACCCAAACACTATACTCGTCTTGCTCACTA------------------------CACT
AGCTTGTGTTTCCTAGTGCTGCGCATGTGGTTCTTCTGAGCATTCCGATGGTGGCCCTTCTTACGC--------------
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-------------------ATGTGCTAACATTGTAAATGCAAAAGAAGCCTAATTGCATATCGCAGGTTTTTACGCAGCT
AGGCAGTTAGTCACCGACAACGTCAGTAATTAAACGCTGTTGTTTGGAGTAATTAAGTCTCTCTAAAACATACTTACTAA
ATTAATTGAACCTCTGAACTCAGTGACTTTGATGATGTCTTGCTCTTATCTAATACCCAGTAGCCACATGATGCATTTGC
TGAGGGCTGATGCCTCTGGACGCAGTAA-GCACACACATAGCCAAGACATAAGCACTCTATAAATAGACAGGTGATTCCT
TTTGTTCCTCTCCACAGCCAAAAAGCAAGAGACATCCCAAGCACCTAGCTATTTCTTGCCCTCTTCTCTGCACACACTCA
TGGCCGCTGTTATCTTGTCCAACACCCGGGTTATGCCCATCAGTTATAACAAGACCATCATGAGCAACTTGTCCTTGCAC
CGTATCGGCAATGGGGCCGACAGAAATCAAGCCACTGTGATCTAAAAGGATTACAAGTTTGGTCATGCTGTTGTTAATGA
CTGGGTAATTTACGAAGGTGCAGGCCCAGGTCCGGTGTTCGCCCGTGGACAAGGCAGCCACATTCTTGCCGGAAACTCCA
TATCTACCATCATGATAACGTTCGAGGATCCAAGGTACAATCTTTTTAACTTTTTATGGCTTTGTTAATTAGGATATTTA
AT-AAATTATATATCCGTTCAACACATTCTAGATTGTTAATCTACATTATCAAACGG--AATTATTTCTGTTTCTCATTT
TCATTTTCCACATGCACATAGGTACAAGGGCTCCAGCCTTGCTGTTATGGGCAACATCTTGGATAATGGCCAGTGGGCTA
TTGTTGGAGGGACTGGGTTATTTAAGTATGCAACTGGGTTCATTGACTTGATTCCTGTTCAACAGTCGAGCCCCAAGAAC
ATTTCAAACATCACCATCGAAGTATGCAATCCAAACTATTGATGCAAATAAGGTCAAAGACGAACGTCATAACTATGTTT
CA----TCCATAATAAAGCAGACACCGGTTGTTCACATTTCCATGTACCAGC---A-ATGACCCTTCTTAATGGTGGTGT
TTCAGTTTGTTCCCTTGTATTTTCTCTATTCTGGGTGAGTTTTTGTCTTGTAATAGATCCTTTTTAGGGTGGTACTTTCC
ATTTCCATGTATTA----CTATGTTGTGCGACAAATCAATAAAGTTCATTTGGTGGCAACCGAAACAAACTAATATATTG
ATAGTATGTTACGGACCATCATGTTTCTACTATGGGCCAGGGCGATCTACATCAGGTCATTGTCTAGGTACTTATGTGAT
CCAGCGGACAAGCCAAATAATTGTCTTATATAAACCATTATCCATGTTGTGTTAATAGTCTTAACTGCATAAACTACTAC
----AATACATATGATTTCAGGCCTAGCAGGCACACAACCCGCATTCAAGCATTTCTTGAGGTGTACAAGAAAATTGAAG
ACTGGGTCTCCCATGATGAGCTATGTGAGGATCTCCTTGAGCATC----------------GAGATAGATGTGTTTATGT
TTCTTTCAATTTCATTTATTTTTATTTGGAAATTTTGTTTCATTGAATTTTTAGTTGTATTTTA----------------
--ATTATTT-TTATACTTGGATTAATG-TTTTTAATAATATTTGCTAAATTATTCAACTGTTTTATCTAAATTGAAGTAT
AGACTAGAAAAAAGAAACCATAAAAGAAT--GGAACACGTATTACAGTGATTCTTTGCTTCCATGAAGCCTC-AAAAAAA
TTTATCGAGCATGCTCCATACACATTATGGAGGCTAGGAATATGGCCACTCTGCTAGAGTTACTAGTGATGTGACCCACC
GCATGCCACTCATCATTTCTTTTCGACATGCAACTGGTAACCATTTTGTT-AATAGTGTAACTCAGTAGCATTGTCAGGC
CTACAACCGCACATGGTGACACAAGAGACCTAGGGGCAGGG-CAGAGCCAG
>chr1B_2
-TCTTCCTTGTATTTGGTGATAAGCATGTGACTGATCACGTGATGCATCAAACGTATCTGAAACAAAATTATCTTCCTGC
TTGCAAGTGGAAGTTTTGTAATGCCAATACACACTGTCTCAGATGGCTGTCGATGCGTCGGTGTGGCCATTTGATTAGTT
ATCAGAGCCTGCATCGCTATTGATAAGATTAAATATTTTCCTCATGATTATACTGGTTCGTAAAAACGTCTCAGGCTGTG
TACGACCATTGTATAACATAGAACTCAAACAGTATACTCGTCTTGCTCACTA------------------------CACT
AGCTTGTGTTTCCTAGTGCTGCGCATGTGGTTCTTCTGAGCATTCCAATGGCAGCCCTTCTTGCGC--------------
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-------------------ATGTGCTAACATTGTAAATGCAAAAGAGGCCTAATTGCATATCATAGTTTTTTACGCAGCT
AGCCAGTTAGTCACCGACAGTGACAGTAATTAAACACTGTTGTTTGAAGTAATTAAGTCTCTCTAAAACAGACTTACTAA
ATTAACTGATCCTCTGAACTCAGTGACTTTGATGATGTGTTGCTCTTATCTAGTACCCAGTAGCCACATGATGCATTTGC
TGAGGCCTGAAGCCTCTGGACGCAGTAA-GCACACACATAGCCAAGGCATAAGCATGCTATATATAGACATGTGATTGCC
TTTGTTACTCTCCACAGCCAAAAA-CAAGAGATATCCCAAGCACCTAGCTATTTCTTGCCCTCTCCTCCACACACAACCA
TGGCGGCTGTTATTTTGTCCAACACCCGGGTTATGCCCACCAGTTATAACAAGACCATCATGAGCAACTTGTCCTTGCAC
CGTATCGGCGATGGGGCCGGCACAAATCAAGCCACTGTGATCCAAAAGGATTACAAGTTTGGTCATACTGCTGTTAATGA
CTGGGTAATTTACGAAGGTGCAGGCCCCGGTCCGGTGTTCGCCCGCGGACAAGGCAGCCACATTCTTGCCGGCAACTCCA
TATCTACCATCATGATAACGTTCGAGGATCCAAGGTACGACATTTTTAAATTTTTATGGCTTCGTTAATTAGGATA----
-----------------------------------GTTAATCTACATTATAAGAAGTTAAATTATTTCTGTTTCTCATTT
TCATTTTCCACATGCACATAGGTACAAGGGCTCCAGCCTTGCTCTTATGGGCAACATCTTGGATAATGGTCAGTGGGCTA
TTGTTGGAGGGACTGGGTTATTTAAGTATGCAACTGGATTCATTGACTTGGTTCCTGTTCAACAGTCGAGCCCCAAGAAC
ATTTCAAACATCACCATCGAAGTATGCAATCCAAATTATTGATGCAAATAAGGTCAAAGACGAACGTCATAACTATATAT
GTATCCTCCATAATAAAGCGGACACCGGTTGTTCGCATTTCCATGTACCAGCCATGCATGACCCTTTTCAATGGTGGCGT
TTCAATTTGTTCCCTTGTATTTTCTCTATTCGGAGTGATTTTTTAT-TTCTACTAGATCCTTTTCAAGGTGTTACTTCCC
ATTTTCATGTATTA----CTATGTTGTGCAACAAATCAATAAAGTTCATTTGGTGGCAACCG-AACAAACTGATATAGTG
ATAGTATGGGCCGGACCATCTTGTTTCTACTATGGGTCAGGGCGATCTACATCAGGTCATTGTCTAGGTACTTATGTGAT
CCAGCGGATGAGCCAAATAATTGTCTTATATAAACCATTATCCCTGCCGTGTTAC-AGTCTTAACCACATAAATTACTAC
AATAAGTACATATGATTTCA------------------------------------------------------------
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---------------------------------------------------
>chr1B_2050
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-----------------TCAGGCCTAGCAGGCATACAAACCGCATTCAAGCATTTCTTGTGGTGTACAAATAAATTAAAG
ACTGGGTCTCCCTTGATGAGCCATTTTAGGATCTCATTGAGCATCATTGACGGCTAGCTAGGAGATAGATGTGTTTGTGT
TTCTTTTAAATTCATTTATTTTTTCTTGGAAATTTTGTTTCATGGGATTTTTAGTTCTATTTTG----------------
--CTTATTTGTTAATC-TGGATTAATG-TTTTTAATAATATTTTCTGAATTGTTCAATTGTTTCATCTAAATGGAAGTAT
AGAAAAGAAACAAGAAAACATAAAAAAACATGGAATACGCATTACAACGATTTTGTTTTTGCGTGCAGCCTCTA-AAATA
ATTATGAAGCGTGCTCCATACACATTATGTAGGCTACGGATATGACGACTCTGCTAGAGTTACTAGTGATGTGACCCCT-
GCATGCCACTGATCATTTCATTTGGGCATGCAACTGGTAACCA-TTTTTT-AGTAGTGTAACTCGGTAGCATTGTCAGGC
CTACAACCGCACACGGTGACACGAGAGACCCGGTGGCAGAG-CAGAGCCAG
>chr1D_2050
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-----------------TCAGGCCTAGCAGGCACACAAACCACATTCAAGCATTTCTTGAGGTGTACAAGAAAATTGAAG
ACTTGGCCTCCCATGATCAGCCATGTGAGCATCTCATTGAGCATCATTGACGGCTAGCAAGGAGATAG-TGTGTTTGTGT
TTCTTTCACATTCATTTATTTTTACTTGGAAATTTTGTTTCATTGGATTTTTGGTTGTATTTTGATCATTTTGTTAATTT
GGATTATTTCTTGTACTTGGATTAATGTTTTTTAATAATATTTTCTGAATTATCCAATTGTTTCATCTAAATGG-AGTAT
ATACTAGAAACAAGAAAACATAAAAAAATATGAAACATGCATTATGGCGATTTCGTGTTTGCATGCAGCCTC-T-AAGAA
ATTATGGAGCGTGCTCCATACACATTATGGAG---------------------------TTACTAGTGATGTGACCCCTA
T-ATGCCACTGATCATTTCTTTTGGGCATGCAACTGGTAACCA-TTTTTT-AGTAGTGTAACTCGGTAGCATTGTCAGGC
CTACAATCGAA-AAGGTGACACGAGAGACCCAGCGGCAGGG-CAGAGCCAG
>chr1D_2052
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-------------------AGGCCTAGCAGGCACACAAACCGCATTCAAGCATTTCTTTAGGTGTACAGGAAAATTGAAG
ACTGGGTCTCCCATGATGAGCTATGTGAGGATATCATTGAGCATCAATGACGGCTAGCTAGGAGATAGCTATGATTATGT
TTCTTTCAAATTCATTTATTTATATTTGGAAATTTTGTTTCATTGGATTTTTAGTTGTATTTTA----------------
--ATTATTTGTTATACTTGGATTAATGGTTTTTAATAATATTTGCTAAATTATTCAACTATTTGATCTAAATTCAAGTAT
AAACTAGAAAACATAAAACATAAAAAAAT--GGAACACGCATTACGGTGATTATGTGCTTGCGTGAAGCCTC---AAAAA
ATTATGGAGCATGCTCCATACACATTATGGAGGCTACGAATATGGCCACTC---------TACTAGTGATGTTACCCACC
GCATGCCACTTCTCATTTCTTGTGGGCATGCAACTGGTAACCA-TTTTTTCAGTAGTGTTACTTGGTAGCATTGTCAGGC
CTACAACCGCACACAGGGACACAAGAGACCCAAGGGCAGGGGCAGAGCCA-
>SNPs
S---------------------------------S---S---S-----------------------------------S-
---------------------------S----------------------------------------------------
-----------------------S----------------------------------S-----SS--------------
----------S----SS---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS----
--S--------S-S----------S----------------------------S--SSSSSSS-S-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--------------------S---------------------S------------------
----S-------------------------------S-------------------------------------------
--------------------------------S-----------------------------------------------
----S-----------------------S---------------------------------------------------
---------------------------------------------------------------------S----------
----S------------------------S--------------------------------------------------
-------SS--S--------------------------------------------------------------------
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---------------------------------------------------------------------------S----
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---------------------------------------------------SS---------------------------
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--------------SSSS--------------------------------------------------------------
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--------------------------------------------------------------S-----------------
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----------------------------------------------S---------------------------------
---S----------------------------------S-----------------------------------------
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>forward_412
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------------------------------------------------------------------------TATCCGGC
CACTGGTCTACA--------------------------------------------------------------------
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>reverse_1857
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----------------AGCTATGTTGTGCGACAAATCA------------------------------------------
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---------------------------------------------------
