>input_sequence_74448
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-------------ATGCTGACGCTGGCGCGCGCCCCTCTCCGCTGCCTCTTGCTATCCTCGCCCCCAGCCTTGTCGCTCT
GCTCCCCCTACATGACTGTAGGCCACCGCAGCGTCGGTGGCG---------------GCGTCTCGCCCCTTCTCCTGATG
CTCTCTACTTGCCCCTCGGCGTGGCGTGTCGGCGAGGGCTTCCCGGCCGCAGGGGCACCAAGCGGGGCCTCCTCGCGAGG
CAGGAGCTTCTATGCCCACCCCGTCAGCATGGACGACGAGGCGCCCTCCAGCTCCGCCGCCGGTAGCGTCTACGAC---C
TGGCCGTGCGTTACC-----------------------------------------------------------------
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-----------------------------------------TCACCGTGGATGAAATTGCCAACGCTGCAAATCTTGACG
AGGTGAGTTCATTCTCTCGGCATTTTGGGATTCAGACAATCGGATGATTTCCTGTGGTTCTAGCTAACACAATCTGAGCA
TG-TTTCGGCCTTACTATCCATGGCTTGCTTGTTACAGATGATGCACAAGATTTTTCAAAGTTCTAATGTGTGCAATCAT
ATCTTGTGCA------------------------------GATCTCCATAACCAGCATATATGCACACTGGGAGGACGTG
GGCTTGAGCAT-------------------------------------------TTCGAATGCTGCAAGCTCAAATTTAG
TTAAGCTTGACTGA------------------------------------------------------------------
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-------------------------------------------------------
>chr3A_1_TraesCS3A01G187400
GGTATATGGGCCTTATTGGGCCTTAGTCGAAAAGAGGGGGAAGAAGCAAAGGAGAGGGCACCCCCTCCAAGCCCAATGTG
AATTGGGAAGG-GGGGCCGG-CCCCCCTTTCCTTCCTTC---CCTCTCCTT-CCTTCTCTTCTAATGCCAAC-AAAGGGA
AA--AGGGGGAATCCTACTCCCGGTGGAAGTAGGACTCCC--TTGGGCGCGCCTAGAGAGGTC-GGCCCCTCCGCCTCCT
TCACTCCTTTATATACGGGGGA-GG---GGCACCCCATGGACACACATGTTGATCATTGATCTTTTAGACATGTGCGGTG
CCC----CCACCATAATCCACCTCGGTAATATCGTAGTGGTGCTTAGGCGAAGCCCTGTTTCGGTAACAACATTATCACC
GC---CACGCCGTCGTGCCGACGAAACTCTCCCTCGAAGCTCTACTAGATCGTGAGTTCGTGGGACATCACCGAGCTGAA
CGTGTGCAGATCACGGAGGTGTCGTACCTTCGGTGCTAGATCGGTCAATCGTGAAGACGTACGACTACATCAACCGCGTT
GTCATAATGCTTCCTCTTATGGTCTACGAGGGTACGTAGACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGCGTGTGCGTAGAATTTTTTTT-GAAATTACTGCGTCCGCCAACGCCGGCTGCCTGCTCTACCGCCTCGCCGCCTACTC
CGTTGCCACGCCACTTCCTCCGTCGCGTCAACACACGTCGTCCGCCTTTTCCGCCTTGTCTCGCCGCTTCTCTTCATCAG
CACCAGAAGATAAAGAGGAAACGGATCCCCTTTTCGGCAAATCCCTCGACTTATCGACTCCGACGATGGCGCTCATGTCC
TCGA----------GCTTGATCTGGAGGCATGGCAGGTCCTCA---------------AGCTCGTCATCCACCACCTCCT
CCT-CCAGACTTCGAGCGGATGATGTAGAAGTCAACGACGCGGGGAGGATGACCACGGATCTTGGCGACTGAGCCGCCGC
TG---CCGCCAAGATGCTGACGCTGGCGCGCGCCCCTCTCCGCTGCCTCTTGCTATCCTCGCCCCCAGCCTTGTCGCTCT
GCTCCCCCTACATGACTGTAGGCCACCGCAGCGTCGGTGGCG---------------GCGTCTCGCCCCTTCTCCTGATG
CTCTCTACTTGCCCCTCGGCGTGGCGTGTCGGCGAGGGCTTCCCGGCCGCAGGGGCACCAAGCGGGGCCTCCTCGCGAGG
CAGGAGCTTCTATGCCCACCCCGTCAGCATGGACGACGAGGCGCCCTCCAGCTCCGCCGCCGGTAGCGTCTACGAC---C
TGGCCGTGCGTTACC-----------------------------------------------------------------
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-----------------------------------------TCACCGTGGATGAAATTGCCAACGCTGCAAATCTTGACG
AGGTGAGTTCATTCTCTCGGCATTTTGGGATTCAGACAATCGGATGATTTCCTGTGGTTCTAGCTAACACAATCTGAGCA
TG-TTTCGGCCTTACTATCCATGGCTTGCTTGTTACAGATGATGCACAAGATTTTTCAAAGTTCTAATGTGTGCAATCAT
ATCTTGTGCA------------------------------GATCTCCATAACCAGCATATATGCACACTGGGAGGACGTG
GGCTTGAGCAT-------------------------------------------TTCGAATGCTGCAAGCTCAAATTTAG
TTAAGCTTGACTGAATGTAGT-AAATTCAGTTTAACTCTGAATATGTACTTTGATGTAAATTTGAATGTACAATTGCTTG
CAATTTTTTTTGTAGGTCATGTTTATTCAGAAGAAGAAATGAAGTGCTGAAGGTTTTTAGTAAGTTAGTGGTTAACTGAA
CTACTGATTTTTTTTTAAATGAACATGAACTTGATATAGAGAATCAGTGTACATAAACATTGTTTCTTTCTTTCTTTTTG
CAGCAAGCAGCAATAAGACAATTCTTCCTAACCAAAAAATTTCAATGATGGGGTACAGAAAAAACACTTGTAGCCATTTC
TATAAACTGAAACAAACCCTGAACCTGAATCTGTCAACCCTGAACCTGATTGTGAACAAATCAAGTGCCAATTCACCCTG
AACCTGATTGTGAACAACCCTGAACATGTGTTGTTGCTCTCCAAGTTTTGTTTTGGAATTTCAATTTCCCCTTGGCCTAC
TCAATTCAATTCAAATCGCGAACAAATCAAGTGCCAATTCTATTTCTATCATGTGCTGATTGTGAACAGAGCAGCAGCAA
TAGAGGCGGGCGGGGCAAACTCACAAGCAACAGCACCAGCAGAGGCGGGGCAGGGGACAAAGGCAACAGCAACACGAAAG
GTCCACGGCGACAACGTTGACCACTAGCAGAAACAACATGGGATGCGGGAGTGGCCGGAATTTTCCACGGCGCCGGCGGC
CGAAGCGGACGAAGTCGAGCCGCAGGTGGGCGGCCGTGGGCGGCGAAGGTGAGTGGCGCAAGTGTTGGGGAGATTCCACC
ACGTGGACATGGAACATCACCAGGCGGGCGGCGGTGTGGGTACAGGCAGGCAACGGCGGCGCAACTCCGAGCGGGCGGCG
GTGCAGGTCGATTTTGTGCCGAGTGGCGCAGGTGGGAAGCTGCGGCGCAGGGCTAGGCGGGCGGCGGCGCTGGTGTTGGT
CGCGTGCTGGGCCAGAAGGTGGATGGCGACGCGCGACCGACGGTGGCTGTAAGGC
>chr3A_1
GGTATATGGGCCTTATTGGGCCTTAGTGGAAAAGAGGGGAAAGAAGCAAAGGAGAGGGCGCCCCCC---AGCCCAATCCG
AATTGAGAAGG-GGGGCCGG-GCCCCCTTTCCTTCCTTCTTCCCTCTCCTT-CCTTCTCTCCTAATGCCAAC-AAAGGGA
AA--AGGGGGAATCCTACTCGCGGTGGGA-TAGGACTCCC--TTGGGCACGCCTAGAG--GCCGGCCCCCTCCCCCTCGT
ACACTCCTTTATATACGGGGGA-GG--GGGCACCCCATGGACACACAAGTTGATCAGTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTCCACCATAATCCACCTCGGTAATATCGTAGCGGTGCTTAGGCGAAGCCCTGTTCCGGTAGCAACATCATCACC
ATCATCACGCCGTCATCCTGAAGAAACTCTCCCTTGAAGCTCTACTGGATCGTGAGTTCGCGGGACGTCACCGAGCTGAA
CGTGTGCAGATCGCGGAGGTGTCGTACCTTCGGTGCTAGATCGGTCGATCATGAAGACGTACGACTACATCAACCGCGTT
GTCATAACGCTTCCGCTTACGGTCTACGAGGGTACGTAGACGATAATATCCCCTCTCATTGCTATGCATCACCATGATCT
TGCGTGTGTGTAGGAAATTTTTT-GAAATTACTGCGTTCCCCAAC-----------------------------------
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-------------------------------------------------------
>chr4A_1
GGTATATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGGAAAGAAGCAAAGGAGGGGGCGCGCCCCCCAAGCCCAATTCG
AATT-GGGAGGGGG--CCCGACCCCCCTTTCCTTCCTTCTTCCCTCTCCTT-CCTTCTCTCCTGGAACCAACAAA--GGG
AA--GGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCT--TGGGGCGCGCCTAGAGAGGCCGGCCCCCTCCCCCTCCT
CCACTCCTTTATATACGGGGGA-GG--GGGCACCCCGTAGACACACAAGTTGATCATTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTCCACCATAATCCACCTCGGTAATATCGTAGCCGTGCTTAGGCGAAGCCCTGTTCCGGTAGCAACATCATCACC
GTCATCGCGCCGTCGTGCTGACGAAACTCTCCCTCAAAGCTCTACTAGATCGTGAGTTCGCGGGACGTCACCGAGCCGAA
CATGTGCAGATCACGGAGGTGCCATACCTTCGGTGCTAGATCGGTCGATCGTGAAGACGTACGACTACATAAACCGCGTT
GTCATAACGCTTCCGCTTACGGTCTATGAGGGTACATAGACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGTGTGTGCGTAGGAATTTTTTT-GAAATTACTGCGTTCCCCAAC-----------------------------------
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-------------------------------------------------------
>chr4A_1
GGTATATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGGAAAGAAGCGAAGGAGGGGGCG-CCCCCCCAAGCCCAATACG
AATT-TGGAGG-GGGGCCGG-CCCCCCTTTCCTTCCTTCTTCCCTCTCCTT-CCTTCTCTCCTAGAACCAAC-AAAGGG-
-A--AGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCT--TGGGGCGCGCCTAGAGAGGCC-GGCCCCTCCCCCTCCT
CCACTCCTTTACATACGGGGGA-GG--GG-CTCCCCATGGAAACACAAGTTGATCATTGATCTTT-AGCTGTGTGCGGT-
GCCCCCTCCACCATAATCCACCTCTGTAAAATCATAGCGGTGCTTAGGTGAAGCCCTGTTCCGGTAGCAACATCATCACC
GTCATCACGCCGTCGTGCTGAAGAAGCTCTCCCTTGAAGCTCTACTGGATCGTGAGTTCACGGGACGTCACCGAGCCGAA
CATGTGCAGATCACGGAGGTGCCGTATCTTCGGTACTAGATCGGTCGATCGTGAAGATGTACGACTATATCAACCGCGTT
GTCATAACGCTTCCGCTTACGGTCTATGAGGGTACGTAGACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGCGTGTGCGTAGGATTTTTTTT-GAAATTACTGCGTTCCCCAA------------------------------------
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-------------------------------------------------------
>chr7A_1
GGTGTATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGAGAAGAAGCAAAGGAGGGGGCACCCCCCCGAAGCCCAATCTG
AATT-GGGAGA-GGGGCCGG-GCCCCCTTTCCTTCCTTCTTCCTCCTCCTT-CCTTCTCTCCTAAAACCAAA-CAAGGG-
-A--AGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCC--TTGGGCGCGCCTAGAGAGGTCGGCCCCCTCCCCCTCCT
CCACTCCTTTGTATACGGGGGAGGG--GGGCACCCCATGGACACACAAGTTGATCATTGATCTTT-AGCCGTGTGCGGTG
CCCCCCTCTACCATAATCCACCTCGGTAATATCGTAGCGGTGCTTAGGAGAAGCCCTGTTCCGGTAGCAACATCATCACC
ATCATCACACCGTCGTGCTGATGAAACTCTCCCTCGAAGCTCTACTGGTTCATGAGTTCGCGGGACGTCACCGAGCTGAA
CGTGTGCAGATCGCGGAGGTGTTGTACCTTCGGTGCTAGATCGGTCGATCGTGAAGACGTACGACTACATCAACCGCGTT
GTCATAACGCTTCAGCTTACGGTCTATGAGGGTACATAGACGATACTCTCCCCTCTCATTGCTATGCATCACCATGATCT
TGCGTGTGCGTAGGAATTTTTTT-GAAATTACTGTGTTCCCCAAC-----------------------------------
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-------------------------------------------------------
>chr7A_1
GGTATATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGGAAAGGAGCAAAGGA-GGGGCT-CCCCCCCAAGCCCAATCTG
AATT-GGGAGGGGG--CCGG-CCCCCCTTTCCTTCCTCCTCCCTCCTCCTT-CCTTCTCTCCTAAATCCAAC-AA--GGC
AA--GGGGGGAATCCTACTCCCGGTGGGAGTATGACTCCCCTTGGGGCGCGCCTAG-GAGGCCGGCCCCCTCCCCCTCCT
CCACTCCTTTATATACGGGGGA-GG--GGGCACCCCATAGACACACAAGTTGGTCATTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTCCACCATAATCCACCTCGGTAATATTGTAGCAGTGCTTAGGCGAAGCCCTGTTCCGGTAGCAACATCATCACC
GTCATCACGCCGTCATGCTGACGAAACTCTCCCTCGAAGCTCTACTAGATCGTGAGTTCGCGGGACATCACTGAGCCGAA
CGTGTGCAGATCGCGGAGGTGCCGTATCTTCGGTACTAGATCAGTCGTTCGTGAAGACGTATGACTACATCAACCGCGTT
GTCATAACGCTTCCGCTTATGGTCTAAGAGGGTACATAGACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
CGCGTGCGCGTAGGATTTTTTTT-GAAATTACTACGTTCCCCAACG----------------------------------
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-------------------------------------------------------
>chr7A_1
GGTATATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGAGAATAAGCAAAGGAAGGTGCGCGCCCCCCAAGCCCAATCCG
AATT-TGGAGGGGGGGCGGG-CCCCCCTTTCCTTCCTTTTTCCTCCTCCTT-CTTTCTCTCCTAAAAACAAA-CAAGGGA
GG--GGGAGGAATCCTACTCCCGGTGGGAGTAGGACTCCC--TTGGGAACGCCTAGAGAGGTCGGCCCCCTCCCCCTCCT
CCACTCCTTTATATACAGGGGA-GG--GG-CACCCCATGGACAGAGAAGTTGATCATTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTCCACCATAATCCACCTCGCTTATATCGTAGTGGTGCTTAGGTGAAGCCTTGTTCCGGTAGCATCATCATCATC
GTCATCACGCCGTCGTGCAAACGAAACTCTCCCTCGAAGCTCTACTAGATCGTGAGTTCGTGGGACGTCACCAAGCTGAA
TGTGTGGAGATCACGGAGGTGTCGTACCTTCGGTGCTAGATCGGTCGATCATGAAGACGTATGACTACATCAACCGCGTT
GTCATAACGCTTCCGCTTACGGTCTACGAGGGTACGTAGACAATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGCGTGTGCGTAGGAATTTTTCTTGAAATTACTGCGTTCCCCAACACCGGCTGC--------------------------
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-------------------------------------------------------
>chr7A_1
GGTGTATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGAGAAGAAGCAAAGGC--GGGAGCGCCCCCCAAGCCCAATCCG
AATT-AGGAGGGGG--CCTG-CCCCCCTTTCCTTCCTTCTTCCTCCTCCTT-CCTTCTCTCCTAAAACCAAA-CAAGGGA
AGGGGGGGGGGATCCTACTCCCGGTGGGAGTAGGACTCCC--TTGGGCGCGCCTAGAGAGGCC-GCCCCCTCCCCCTCCT
CCACTCCTTTATATACGGGGGA-GGGGGG-CATTCCATGGACACACAAGTTGATCATTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTGCACCATAATCCACCTCGGTTATATCGTAGCGGTGCTTAGGCGAAGCCCTATTCTGGTAGCATCATCATCACC
GTCATCACGCCGTCGTGCTGACGAAACTCTCCCTCGAAGCTCTACTAGATCATGAGTTCGCGGGACGTCACCGAGCTAAA
CGTGTGCAGATCGCGGAGGTGTCGTACCTTCGGTGCTAGATCGGTCAATCGTGAAGACGTATGGCTACATCAACCGCGTT
GTCATAACGCTTCCGCTTACGGTCTACGAGGGTACGTAGACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGCGTGTGCGTAGGATTTTTTTTTGAAATTACTGCATTCCCCAAC-----------------------------------
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-------------------------------------------------------
>chr1A_1
GGTGTATGGGCCTTATTGGGCCTTAGTGGATGAGAGGGAGAAGAAGCAAAGGAGGGGGCA-CGCCCCCAAGCCCAATCCG
AATT-GGGAGGGGG--CCGG-GCCCCCTTTCCTTCCTTCTTCCTCCTCCTT-CCTTCTCTCCTAAAACCAAA-CAAGGG-
-A--AGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCC--TTGGGCGCGCCTAGAGAGGCC-GCCCCCTCCCCCTCCT
CCACTCCTTTATATATGGGGGA-GGGGGG-CACCCCATGGACACACAAGTTGATCATTGATCTTTTAGCCGTGTGCCGTG
GCCCCCTCCACCATAATCCACCTCGGCTATATCGTAGCAGTGCTTAGGCGAAGCCCTGTTCCGGTAGCATCATCATCACC
ATCATCACGCCGTCGTGCTGACGAAACTCTCCCTCGAAGCTCTACTGGATCGTGAGTTCGCGGGACGTCACCGAGCCGAA
CGTGTGCAGATCGCGGAGGTGTCGTACCTTTGGTGCTAGATCGGTCGATCGTGAATACGTACGACTATATCAACCGCGTT
GTCATAATGCTTCCACTTACGGTCTACGAAGGTACGTAGACGATACTCTCCCCTCTCGTTGCTATGTATCACCATGATCT
TGTGTGTGCGTAGGAATTTTTTT-GAAATTACTGCGTTCCCCAA------------------------------------
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-------------------------------------------------------
>chr1A_1
GGTGTATGGGCCTTATTGGGCCTTAGTGGAAGAGAGGGAGAAGAAGCAAAGGAGGGGGCGCGCCCCCCAAGCCCAATCCG
AATT-GGGAGGGGGGT-CGG-GCCCCCTTTCCTTCCTTCTTCCTCCTCCTTTCCTTCTCTCCTAAAACCAAA-CAAGGG-
-A--AGGGGGAATCCTACTCCCGGTGGGAATAGGACTTCC--TTGGGCGCGCCTAGAGAGGCCGGCCCCCTCCCCCTCCT
CCACTCCTTTATATACGGGGGA-GGGGGG-CACCCCATGGACACACAAGTTTATCATTGATCTTTTAGCCGTGTGCGGTG
CCCCCCTCCACCATAATCCACCTCGGTTATATCATAGCGGTGCTTAGGCGAAGCCCTATTCCAGTAGCATCATCATCACC
GCCATCATGCCATCGTGCTAACGAAACTCTCCCTCGAAGCTCTACTAGATCGTGAGTTTGCGGGACGTCACCGAGCCGAA
CATGTGCAGATCACGGAGGTGTCGTACCTTCGGTGCTAGATCGGTCGATCGTGAAGACGTACGACTACATCAACTGCGTT
ATCATAATGCTTCCGCTTATGGTCTATGAGGGTACGTATACGATACTCTCCCCTCTCGTTGCTATGCATCACCATGATCT
TGCGTGTGTGTAGGAACTTTTTT-GAAATTACTGCGTTCCCCAAC-----------------------------------
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-------------------------------------------------------
>chr5D_661
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--------------------------------------------CGCCGGCCGCCTGTTCTGCCGCCTCGCCACCTGTTC
CGTCGCCACGCCGCCTGCTCCGTCGCCTCGCCACGCGCCGTCCGCCTTCTTTGCCTCGTCTCACCGCTTCTCTTCATCAG
CACCAAAAGATAAAGAGGAAACGGATCCCCTTTTCGGCAAAGCCCACGACTTGTCGGC-CCGACGACGGCGCTCATGTCC
TGCACGGGGTTGGGGCTCGATCTGGAGGCACGGCAG---------------GTCCTCGAGCTCGTCATCCACCACCTCCT
CCTTCCAGACTCCGAGCGGCAGCTGCGGAAGTCAACGGCGCAGTGAAGACGACCACGGCTCTTGGCGACTGAGCCGCCGT
CG---CCGTAGAGATGCCGCCGCTCGCGCGCGCCCCTCTCCGCCGCCTCCTGCTCTCCTCGCCCCCAGTCCTGTCGCTCT
GCTCCCCCTACATGGCCGTAGGCCGCCGC------------AGTGTCGGCGGCGGTGTCC---CTCCCCTTCTCCTGATG
CTCTCCGCTCGCCCCTCGGCGTGGCGTGTCGGCGAGGGCTTCCTGGCCGCAGGGGCACTAATCGGGGCCTCCTTGCGAGG
CAGGAGCTTCTGTGCCCGCGCCGTCGGCATGGACGACGAGGCGCCCTCCAGCTCCGCCGCCGGCAGCGTCTACGAC---C
TGGCCGCGCCTTACC-----------------------------------------------------------------
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-----------------------------------------TCACCGTGGATGACATTGCCGACGCTGCAAATCTTGACG
AGGTGAGTTCATTCTCTCGGCATTTTGGGATTCAGACAATCGGATTATTTCATGTGGTTCTAGCTAACACAATCTGAACA
TG-TTTCGGCCTTACTGTCCATGGCTTGCTTGTTACAGATGATGCACAAGATTTGTCAA---------------------
---------A------------------------------GATCTCCATAATCACCATATATGCA-ACGGGTAGAACCT-
GGCTCGAGCATTTCGAATGCTGCAAGCTCAGCGACCACGTCCTTGTTCGAGCATTTCAAATGCTGCAAGCTCAAATTTTG
TTAAGCTTGACTGAATGTAGT-AAATTCAGTTTAACTCTTAATATGTACTTTGATGTAAATTTG----------------
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-------------------------------------------------------
>chr7D_661
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--------------------------------------------CGCCGGCCGCCTGTTTCGCCGCCTCGCCGCCTCTCC
CATCACCACGCCACCTGCTCCGTCGCCTTGCCACGCGCTGTCCGCCTTCTCCGCCTAGTCTCACAGCTTCTCTTCATTAG
CACCAGAAGATAGAGAGGAAACAGATCCCCTTTTCGGCAAAGCCCGCGACTTGCCGGCTCCGATGGCGGAACTCATGTCC
TGCAGGGGTTGT--GCTCGATCTAGACGCATGGCAGGTCCTCGAGCTCCTCGTCCTCGAGCTCGTCATCCACCACCTCCT
CCCTCCAGACTCCGAGCGGCAGCTGCGGAAGTCAATGGCGCGGGGAAGACGACCACGACTCTTGGCGACTGAGTCGCCGC
CG---CCATAGAGATGCTGCCGCTGGCGTGCGCCCCTCTCGGCCGCCTCCTACTCTCCTCGCCACCAGCCCTGTCGCTCT
GCTCCCCCTAAATGGCCGTAGGCCGCCGC------------GGCATCGGCGGTGGTGTCC---CGCTCCTTCTCCTGATG
CTCTCTGCTCGCCCCTCAGCGTGGCATGTCGGCGAGGGCTTCCTGGCCGCAAGGGCACTAATTGGGGCCTCCTCGCGAGG
CAGGAGCTTCTGCGCCCGTGTCGTCAGCATGGACGACGAGGCGCCCTCCAGCTCCACCGCCGGTAGCGTCTACGAC---C
TGGCCGCGCCTTACC-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TCATCGTGGATGACATTGCCGACGCTGCAAATCTTAACG
AGGTGAGTTCATTCTCTCAGCATTTTGGGATTCATACAATGGGATGATTTCCAGTAGTTCTAGCTAACACAATTTGAACA
TG-TTTCGGCCTTACTGTCCATGGCGTGCTTGTTACAGATGATGCACAATATTTGTCAA---------------------
---------A------------------------------GATCTCCATAACCACCATATATGCA-ACAGGTAGAACGTG
AGCTCGAGCATTTCGAATGCTGCAAGCTCAGCGACCACGTCCTTGTTCGAGCATTTCGAATACTGCAAGCTCAAATTTAG
TGAAGCTTGACTGAATGTAAT-AAA-TCAGTTTAACTCTGAATATGTACTTTGATGTAAATTTG----------------
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-------------------------------------------------------
>chr3D_714
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-----------------CTCCGTCGCCTCGCCACGCGTCGTCCGCCTTCTTCGCCTGGTCTTCTCGCTTCTCTTCATCAG
CACCAGGAGATAAAGAGGAAACAGATTCCCTTTTAGGCAAAGCCCGCAACTTGCCGGCTCCGATGGAGGCACTCATGTCC
TGCAGGGGGTTGGGGCTCGATCTGGAGGCATGGCAGGTCCTCGAGCTC---------------GTAATCCACGACCTCCT
CCCTCCAGACTCCGAGCGGCAGCTGCGGAAGTCAACGACGCGGGGAAGATGACCACGGCTCTTGGCGACTGAGCCGCCGC
CG---CCGTAGAGATGCCGCCGCTGGCGCGCACCCCTCTCCGCCGCCTCCTGCTCTCCTCGCCCCTAGCCCTGTCGCTCT
GCTCCCCATACATGGTCGTAGGCCGCCGC------------GGCGTCGTCGGCGGTGTCC---CACCCCTTCTCCTCATG
CTCTCCGCTCGCCCCTCAGCGTGGCGTGTCGGCGAGGGCTTCCTGGCCGCAGGGGCACTAATCGGGGCCTCCTCGCGAGG
CAGGAGCTTCTGCGCCCGCGCCGTCAGCATGGACGACGAGGCGCCCTCCAGCTCCGCTGCCGGCAGCATCTACGCC---C
TGGCCGCGCCTTACC-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TCACTGCGGATGACATTGCCAACGCTGCAAATCTTGATG
AGGTGAGTTCATTCTCTCGGCATTTTGGGATTCGGACAATCAGATGATTTCTTGTGGTTCTAGCTAACACAATCTGAACA
TG-TTTCAGCCTTACCGTCCATGGCTTGCTTGTTACAGATGATGCACAAGATTTGTCAA---------------------
---------A------------------------------GATCTCCATAACCACCATATATGCA-ACGGGTAGAACGTG
GGCTCGAGCATTTCGAATGCTGCAATATCAACGACCACGTCCTTGTTCGAGCATTTCGAATGCTGCAAGCTCAAATTTAG
TTAAGCTTGACTGAATGTAGTAAAT-TCAGTTTAAATCTGAATATGTACTTTGATGTA----------------------
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-------------------------------------------------------
>chr1A_966
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-------------------------------------------------------CGGCTCTTGGCGACTGAGCCGCCGC
CG---CCGCCGAGATGCTGCCGCTGGCGCGCGCCCCTCTCCACCGCCTCCTGCTCTCCTCGCCCCTTGCTCTGTCGCTCT
GCTCCCCTTACACGACCGTAGGCCGCCGC------------G---------------GCGTCTCGCCCCTTCTCCTGATG
CTCTCCGCTCGCCCCTCGGCGTGCCGCGTCGGCGAGGGCTTCCCGGCCGCAGGGGC------------CTCCTCGCGAGG
CAGGAGCCTCTGTCCCCGCGCCGTCAGCGTGTACGACGAGGCGCCCTCCAGCTCTGCCGCCGGCAGCGTCTACGACGACC
TGGCCGCGCCCTACCTCTCCGTCCGCATCCGCTGCCGCAAGGAGGACGCCGTCAGTATCCCCCCTCTACTTCAGAGCACT
AGTTTCTAGTACTACTTTCTAACCTCTATCTCATTTTTTCCCTGACAAAAGTTTCATGTGTCCTCGCAATCAATCCAGGA
ACTGCTCTCCGAGTCCCTCCTGTGCTTTGGCGCTTGCTCCGTCACCGTGGACGACATCGCCGACGCTGCGAATCTTGACG
AGGTGAGTTCATTCTCTCTGCATTTTGGGATTCAGACAGTGGGATGATTTCCTGTGGTTCTAGCTACT-CAATCTGAACA
AG-TTTCGGCCTTACTGTCGATGGCTTGCTTGTTACAGATGATGCACACCATTCGTCAA---------------------
---------GTATCTAATGTGCGCAATCGTGTGCTGTGCAGATCTCCATAACCACCATATACGCACACGGGGAGAACGTG
GGCTCAAGCGTTTCGAATGCTGCAAGCTCA--------------------------------------------------
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-------------------------------------------------------
>chr1D_966
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-------------------------------------------------------CGGCTCTCGGCGAGTGAGCCGCCGC
CGCCACCGCCGAGATGCTGCCGCTAGCGCGCGCCCCACTCCGCCGCCTCCTGCTCTCCTCTCCCCTTGCCCTGTCGCTCT
GCGCCCCCTACACGACCGTAGGCCGCCGC------------GGCCTCGGCGGCGGCGGCGTCTCGCCCCTTCTCCTGATG
CTCTCCGCTCGCCCCTCGGCGTGCCGCGTCGGCGGGGGCTCCCCGGCCGCAGGGGCACCAACCGGGGCCTCCTCTCGAGG
CAGGAGCTTCTGCGCCTGCGCCGTCAGCGTGGACGACGGGGCGCCCTCCAGCTCCGCCGCCGGCAGCGTCTACGACGACG
TGGCCGCGCCCTACCTCTCCGTCCGCATCCGCTGCCGCAAGGAGGACGCCGTCAGTATTCCCGCTCTAGTTCAGAGCACC
AAGT-------------------CTCTATCAGGG-TTTTCCCTAACAGAAGTTCCATGTGTC-----------TCCAGGA
ACTGCTGTCCGAGTCCCTCCTGTGCTTTGGCGCTTGCTCCGTCACGGTGGACGACATTACCGACGCTGCGAATCTTGACG
AGGTGAGTTCATTCTCTCTGCATTTTGGGATTCGG----TCGGATGATTTCCTGTGGTTCTAGCTAACACAATCTGAACA
AGTTTTCAGCCTTACTGTCCATGGCTTGCTTGTTACAGATGATGCACAAGATTTGTCAA---------------------
---------AGATCTAATGTGTGCAATCGTGTGCTGTGCAGATCTCCATAACCACCATATATGCACACGGGGAGAACGTG
GGCTCAAGCATATCGAATGCTGCAAGCTCA--------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>SNPs
---------------------------S-------------------------------------S-----------S--
------------------------------------------------------------S-------------------
---------------------------S---------------------------------------------S------
S----------------------------------------------S--------------------S-S---------
------------------------------------------------------------S-----S------S------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-------------S-----------------------S-S-----------------S---S--------------SS--
---S----------S-S---------S--SS---S-------------S-------S-----S-----------------
-----------------------------------------S---S------S---S---------S-------------
-SS--------------S------------------------S-------------------------------------
-----------S-------SS-S--SS-------------------S-----------S---------------------
S---------S--------S-----------------------S-----S----S---------------S---------
----------------S-------S----SSSSSSSSSSSS---------------------------------------
------S--S---------------------------------------------------S------------------
-----------S-----S-S------------------------------------------------------------
------S--S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------------------------------------------------------------------S--
----------------S-------------------------------------S----SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------------------------S-------------S-----S-----
----S---------------------------------------------------------------------------
----------------------------------------------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCACCTCC
TCCTCCAGACTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGGTCGATTTTGTGCCGAGT--------------------------------------------------------
-------------------------------------------------------
