>input_sequence_74446
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---------------------------------------------------------------GCAGAGCAGTTCCAGTC
CGAGTTTCCATGGCCGCCGCCGGGAACCCCATCGGTGGCGTCCTTCTGCTTCTGCTGCTCGTAGCCGCCTTCATGTCCAC
CGCCGAAGGCAGAATCAAGGGGGTCGTCCGAGCGCCCTTGGCGTCTGTC------GCACCAGGCGCCGGCGAGCGTGACA
TGGGAGGCGAGCGCGTGCCCACGCACTCCGTCGTCGACTGTTTCATGGGCTGCGTCAGCATGGCGGATGATTGTGGGAGC
TTTTGCATGGACAAGCCGCTCGACGAAGCGAACGACTGCATGACGGAATGCCTCACCGCTGACCTCTCCTGCCTCACCGG
CTGCGGCCCGGCACTCGGTCCCGCGCCGCCGGCTGATGCCTGAGGAGCTACTCCGAGCCTCCGTTCACCATTCTTCGGTT
CTTCCTATGTAATCGTGTGAGACAGTATAAACTCTGCATTGTACCGTAGCTGATCACTGTATTGTCAGCTGTACCGCACA
CCCCCTCACTTGTAGCAGTTCATGCCCACGATCGTCAGAACGTGCATAGCTGCAGTTGGTCTACT--TATATACTGTAAC
TCGACGAATAAATAAATGAATCAAGCTTTCCAGT----------------------------------------------
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>chr2D_1_TraesCS2D01G513400
CATCGTGACGCAGGTTTGAAGCCGTCTGAAAGGACGAGGGGGAGTCCACGACGGCGGTGGTGAACGA-GGGGCATGTGCC
AATAGTGCGCGCCTGCGCGGTGGTGACTGTGGCGGACTGCGCGACGCTGGCGTGCTGCCCGTGCGTGATCGTCACTCGTC
AGCCTCCTGGTCCTGCCGCTCGTTTGGGCGCCGTTCGCCGTCGGCAGGCTAGTGATCAGGATGACGCAGAGGCGGCTGCT
GCTGCGTGGGAAGCGGGCGCCCCGACGCCGAGCGACGATGGCGGCATCC--------------------GCGAGAAGGGC
AGAGAAGGAGCTCGACGTCGTCGGCGTCGGGACAACGGAGATGACGGGCGGTGAGGTTGTCCGGCAGGATTCGTCTATCA
ACACGAGGGGGAGCTGCGTGGCTAGAGGAGATGTAAGGGACATGTCGGCTCAGTATGGTCCATGTTTCGTGAGGACTTGG
CTGAGCCGGCGACCAGGAGACGGCGCCTACCAGTCATAAATGTGGCAGACATATTTGTGTTACAATTCCTATACGCTTGA
GATACATCCAGATATACATGAATGGTCTCAGAT--CCCGAGGAACCTGGGCGGTGGAGATATAGGGAGCATCTGAGACTG
AGCCCAGGAATGCATTTCCCCGCTTCTTCCTCCTTTCCCCTTCTTCTTCCGAGGCACAAATTGCATGTAGGAAGCTCGGC
CCAGTTTCACGTCTTCTTCCTCCTCCTTCGGTCCTTCCTCCATCCTCCTCCCTTCTTCGTGCTAAACACGCACAGCGAGT
CAGTGATCACGCAAGTAGTGCTCGCAAGCCTAAAGTGACCAACACGGAGTGATCTGCCTACATGCAATTTGTGCCCCGCG
CTCAGCGCGGAGGAGATTGGGACGCCATGTCCACCCCGACGAGCTACTTAAACAACAGCGCGCGTCCTTGAAATGCAGCC
CTACCCATCAAAAGCTCACAGCGCAGAGCAGTACATCTGCCTCCCATACACATTTCGCACAGCGCAGAGCAGTTCCAGTC
CGAGTTTCCATGGCCGCCGCCGGGAACCCCATCGGTGGCGTCCTTCTGCTTCTGCTGCTCGTAGCCGCCTTCATGTCCAC
CGCCGAAGGCAGAATCAAGGGGGTCGTCCGAGCGCCCTTGGCGTCTGTC------GCACCAGGCGCCGGCGAGCGTGACA
TGGGAGGCGAGCGCGTGCCCACGCACTCCGTCGTCGACTGTTTCATGGGCTGCGTCAGCATGGCGGATGATTGTGGGAGC
TTTTGCATGGACAAGCCGCTCGACGAAGCGAACGACTGCATGACGGAATGCCTCACCGCTGACCTCTCCTGCCTCACCGG
CTGCGGCCCGGCACTCGGTCCCGCGCCGCCGGCTGATGCCTGAGGAGCTACTCCGAGCCTCCGTTCACCATTCTTCGGTT
CTTCCTATGTAATCGTGTGAGACAGTATAAACTCTGCATTGTACCGTAGCTGATCACTGTATTGTCAGCTGTACCGCACA
CCCCCTCACTTGTAGCAGTTCATGCCCACGATCGTCAGAACGTGCATAGCTGCAGTTGGTCTACT--TATATACTGTAAC
TCGACGAATAAATAAATGAATCAAGCTTTCCAGTATTCAGTTTCTCTCAGTTTAACATGGTAATCAGTTAGATCCTCAAT
GAGCCCTGACGGCTCACCATCTGCCCCCGCCACCGGCGACGGCACTCTGCCTTCTCTCACATCTAGCACCATCACTTGCC
GATTCCGTCCGGATGAAAGACGACCTTGCAATTCTGCAGTGGATTTACAGTTTACACTCGGAGTCTCAGATTTCGACCGA
GCTCTTGGGTCTTCTTCCGAATGACGGCGCCACCACAGCTATCATTTCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TATTCCTCGCCGAGTGCTAAAACACGGACAC---------------TTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCT-GTCACTGCCTCACGGCAAAGAGGCACCGCGCGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATACGCGTCCGCAACAGACGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGCC
GTAGCTTGACACTCGGCAAA-GCATATGCAACATCCTAT----TTTCTTTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA--ATGGCG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACCAGTAGGACAGCCTGGCCCACATGGGA-GCTGACAGTT-AC
ATAGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGCCTTCTTTTTCGAGAGCTGCTCTCAGAAAAGTTGTGGCACAACAG
TAGGTCTCCCAGACAATCATGTTTTCGAGACGAGCTCTCGGTAATATGTAGTTTTTCGAGTGTTGCTCTCGGAAATCTTT
TCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr2A_4
---CGTGACGCAGGTTTGAAGCCATCTGCAAGGACGAGGGGGAGTCCACGACGACGGTGGTGAACAAGGGGGCATGTGCC
AGTAG--------TGCGCGGTGGTGACTGTGGCGGACTGCGCGACGCTGGCGTGCTGCCCGTGCGTGATCGTCACTCGTC
AGCCTCCTGGTCCTGGCGCTCGTTAGGGCGCCGTTCGCCGTCGGCAAGCTAGTGACCAGGAT------------------
-----------------------GACGCCGAGCGACGATGGCGGCATCC--------------------GCGAGAAGGGC
AGAGAAGGAGCTCGACGTCGTCGGCGTCGAGACAACGGAGACGACGGGCGGTGAGGTTGTCCGGCAGGATTCGTCTATCA
ACACGAGGGGGAGCTGCGTGGCTAGAGGAGATGTAAGGAACAGGTCGGCTCAGTATGGTCCATGTTTCGTGAGGACTTGG
CTGAGCCGGCGACCAGAAGACGGCGCCTACCAGTCATAAATGTGGCAGACATATTTGTGTTACAACTCCTATACGCTTGA
GATACATCCAGATATACATGAATGGTCTCAAAT--CCCGAGGAACCTGGGCGGTGGAGATATAGGGAGCAT---------
AGCTCAGAAATGCATTTCCCCGCTTCTTCCTCCTTTCTCCTTCCTCTTCCGAGGCACAAATTGCATGTAGGAAGCCCGGC
CCAGTTTCACGTCTTCTTCCTCCTGCTTCGGTCCTTCCTCCATCCTCCTCCCTTCTTCGTGCTAAACACGCACAGCGAGT
CAGCGATCACGCAAGTAGTGCTCGCAAGCCTAAAGTGACCAACACGGAGCGATCTGCCTACATGCAATTTGTGCCCCGCG
CTCAGCGCGGAGGAGATTGGGACGCCATGTCCACCCCGACGAGCTACTTAAACAACAGCGCGCGTCCTTGAAATGCAGTC
CTACCCATCAAAAGCTCACAGCGCAGAGCAGTACATCTGCCTCCCATACACATTTCGCACAGCGCAGAGCAGTTCCAGTC
CGAGTTTCCATGGCCGCCGCCGGGAACCCCATCGGTGGCGTCCTGCTGCTTCTGCTGCTCGTAGCCGCCTTCATGTCCAC
CGCCGAAGGCAGAATCAAGGGGGTCGTCCGAGCGCCCTTGGCGTCTGTCGCACCAGCACCAGGCGCCGGCGAGCGTGACA
TGGGAGGCGAGCGCGTGCCCACGCACTCCGTCGTGGACTGTTTCATGGGCTGCGTCAGCATGGCGGAGGATTGTGGGGGC
TTTTGCATGGACAAGCCGCTCGACGAAGCGAACGACTGCATGACGGAATGCCTCACCGCTGACCTCTCCTGCCTCACCGG
CTGCGGCCCGGCACTCGGTCCCGCGCCGCCGGCTGATGCCTGAGGAGCTACTCCGAGCCTCCGTTCACCATTCTTCGGTT
CTTCCTATGTAATCGTGTGAGACAGTATAAACTCTGCATTGTACCGTAGCTGATCACTGTATTGTCAGCTGTACCGCACA
CCCCCTCACTTGTAGCAGTTCATGCCCACGATCGTCAGAACGTGCATAGCTGCAGTTGGTCTACTTATATATACTGTAAC
TCGACGAATAAATAAATGAATCAAGCTTTCCAGTATTCAGTTTCTCTCAGTTTAACATGGTAATCAGTTAGATCCTCAAT
GAGCCC--------------------CCGCCGCCGGCGACGGCACTCTGCCTTCTCTCACATCTAGCACCATCACTTGCC
GATTCCGTCCGGATGAAAGACGACTTTGCAATTCTGCAGTGGATTTACAGTTTACACTCGGAGTCTCGGATTTCGACCGA
GCTCTTGGGTCTTCTTCCGAACGACGGCGCCACCACAGCTATCAT-----------------------------------
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>chr4A_30
-----------------------------AAGGACGAGGGGGAGTCCACCACGACGGCGGTGAACGAAGGGGCATGTGCC
AGTAG--------TGCGCGGTGGTGCCTGTGGCGGACTGCGCGACGCTGGTGTGCTGCCCGTGCGTGGTCGTCACTCGTC
AGCCTCCTGGTCCTGGCGCTCGTTAGGGCGCCGTTCGCCGTCGGCAAGCTAGTGATCAGGAT------------------
-----------------------GACGCAGAGGCGGCTGCTGTGTGGGAAGCGGGCGCCCCGACGCCGAGCGAGAAGGGC
AGAGAAGGAGCTCGACGTCGTCGGCATCGAGACAACAGAGACGACGGGCGGTGAGGTTGTCCGGCAGGATTCGTCTATCA
ACACGAGGGGGACCTGCGTGGCTAGAGGAGATGTACGGGACAGGTCGGCTCAGTATGGTCCACGTTTCGTGAGGACTTAG
CTGAGCCGGCGACCAGGAGACGGCGCCTACCAGTCATAAATGTGGCAGACATATTTGTGTTACAACTCCTATACGCTTGA
GATACATCCAGATATACATGAATGGTCTCAGATCCCCCGAGGACCCTGGGCGGTGGAGATATAGGGAGCATCTGAGACTG
AGCTCAGAAATGCATTTCCC------------------------------------------------------------
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>chr2D_1846
AGCATCATC-----------------------------------------------------------------------
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---------------------------------------------TTCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTTTTCGCCGAATGCTAAAACACGGACACTCGGCAAAGCAAACTTTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTCCT-GTCACTGCCTCATGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGATGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATTCCCGTCCCCAACAGACGGCTCCGTCACTTACTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAA-CCATATGCAACATCCTAT----TTTATTTTT---GTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGATCACATTTATTTATCAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA-TATGATG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGAGCAGTAGGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATCGCTTTGCCGGGAGCTGGTCTCGGCAATG-TCGCCTTCC-TTCCGAGAGTGGCTCTTGGCAAAGTCGGGGC-------
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>chr5D_1855
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---------------------------------------------TTCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TACTCTTCGCCGAGTGCTAAAATACGGACACTCGGCAAAGCAAACTTTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACACCGAGAGCCG
CTAACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGCAACAGACGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGTC
GCAGCCCAACACTCGGCAAA-GCATATGCAACATCCTATATATTTTCTTTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAAAAATGACG
ATATGTTTGCCGAGAGCTGCTCTCGGCGATCCTCCTGACCAGTAGGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATAGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGCCTTCTTTTCCGAGAGCTGCTCTCGGAAAAGTTGTGGCACAACAG
GAGGTCTCCCAGACGACCATGTTTTCGAGAGTAGCTCTCGGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTACAGATAAAAATAAGTACTTGGTAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr7A_1855
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---------------------------------------------TTCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACATTTGGCAAAGCAAACTTTGCCGAGTGTCACTCTTTGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACAGCCTCACGACAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCGCGTGGCATGCCCGTCCGCAACAGACGGCTCCATCAGTTACTCCGTACTTTACCGAGAGCC
GCCGTACGACACTCGGCAAA-GCATATGCAACATCCTAT----TGTCTTTTC---TTGTGAGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAACTTTTAAATAACTTGCTAAATATTTTTGAAAAAA--ATGACG
ATATCGTTGCCGAGAGCAACTCTCGGCAATCCTTCTGACCAGTAGGACAGCGTGGCC------------TGACAGTTTGC
ATAGCTTTGCTGAGAGCTGGTCTTGGCAATG-TCGCCTTCCTTTCCGAGAGCTGCTCTCGGGAAAGTTGTGGCACAACAG
TAGGTCTCCCAGACGACCATGTTTTTGTGAGGGGCTCTCGGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGATGTTTAAGCTATTTCTTTTCTAATTCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr6D_1856
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----------------------------------------------TCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACGCTTGGCAAAGCAAACTTTGTTGAGTGTCACTCTCGGCAAACCCGGCTTCA
CGGCAAACTGCGATCTTTGCT-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGTAACAGACGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAA-GCATGTGCAACATCCTAT----TTTATTTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA-TATGACG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACCAGTAGGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATCGCTTTGCGGAGAGCTGATCTCGGCAATG-TCGCCTTCCTTTCCGAGAGCTGCTCTCGGAAAAGGTGTGGCACAATAG
TAGGTCTCCCAGACGACCATGTTTTCGAGAGGGGCTCTCGGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTAATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATTATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr7D_1856
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----------------------------------------------TCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACACTCGGCAAAGCAAACTTTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGCAACAGATGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAAAGCATATGCAACATCCTAT----TTTATTTTTTTGT-GTGTGT--TTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAATTTCCTAAATATTCTTGAAAAAA-AATTACG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACCAGTAGGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATCGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGCCTTCCTTTCCAAGAGCGGCTCTCGGAAAAGGTGTGGCACAACAA
TAGGTCTCCCAGACGACCATGTTTTCGAGAGGTGCTCTCGGTAATATGTTGTTTTCCGAGTGCTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr7D_1856
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----------------------------------------------TCACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACACTCGGCAAATTAAGCTTTGCCGAGTGTCACTCTCGGCAAACCCACCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACTACCTCACGACAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGACAAAGAGGAGCCACGTGGCATGCCCGTCCGCAATAGACGGCTCCATCAGTTACTGCGTACTTTGCCGAGTGTC
--------ACTCTCGGCAAA-GCATATGCAACATCCTAT----TTTT-----------TGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTGCTAAATATTTTTGAAAAAG-AATGACG
ATATCTTTGCCGAGAGCGGCTCTCGGTAATCCTTCTGACCAGTATGACAGCGTGGCCCACATGGGGGGCTGACAGTTTAC
ATA----TGCCGAGAGCTAGTCTCGGCAATGCTCGCCTTCTTTTCCGAGAGCTGCTCTCGGAAAAGTTGTTGCACAACAG
TAGTA-TCCCAGACGACCATGTTTCTGAGAGGTGCTCTCGGTAGTATATCGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATACATTCTGCTGTC-AAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACAGTGCAATTTGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr2D_1857
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-----------------------------------------------CACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACACTCGGCAAAGCAAACTTTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-ATCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACAGCAAAGAGGAGCCACTCGGCATGCCCGTCCGCAACAGATGGCTCCGTCAGTTACTGCGTACTTTACTGAGAGTC
GCAGCCCGACACTCGGCAAA-GCATATGCAACATCCTATATATTTTCTTTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAA----TGACG
ATATGTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACCAGTAGGATAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATAGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGCCTTCTTTTCCGAGAGCTGCTCTTGGAAAAGTTGTGGCACAACAG
TAGGTCTCCCAGACGACCATGTTTTCGAGAGTAGCTCTCAGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTTCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAAGTACTTGGCAGAAGTGTCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr3D_1857
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-----------------------------------------------CACTACTGGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAGTGCTAAAACACGGACACTCGGCAAAGCAA---------------ACTCTCGGCAAACCCAGCTTCA
CGACAAACTGCCATCTTTA-C-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGCAACAGACGGCT-CGTCAGTTACTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAA-GCATATGCAACATCCTAT----TTTATTTTT---TTGTGTGT--ATTCTTTCTAACTGA
CATGTGGTCCCATTGATCACATTTAT----CAGTAAAAGTTTTAAATAATTTCCTAAATATTCTTGAAAAAA-TATGACG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACTAGTAGGACAGCGTGGCCCACATGGGA-GCTGAGAGTTTAC
ATCGCTTTGCCGAGAGCTGGTCTCGGCAACG-TCGCCTTCCTTTCCGAGAGCTACTCTCGGAAAAGGTGTGGCACAACAG
TAGGTCTCCCAGACGACCATGTTTTCGAGAGGGGCTCTCGGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr3D_1857
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-----------------------------------------------CACTACTGAAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCGAATGCTAAAACACGGACACTCGGCAAAGCAAACTTTGCCGAGTGTTACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTA-CCGTCACTGTCTCACGGCAAAGAGGCACCGCACGGCAAATCCTGCAGACGCCGAGAGCCG
CTCACGGCCAAGAGGAGTCACGTGGCATGCCCGTCCGGAACAGACGGCTCCGTCAGTTACTGTGTACTTTACTGAGAGCC
GCAGCACGACACTCGGCAAA-GCATATGCAACATCCTAT----TTTCTTTTT---T-GTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCTACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA-AATGACG
ATATCTTTGCCGAGAGCACCTCTCGGCAATCCTCCTGACCAGTAGGACAGCGTGGCCCACATGGAA-GCTGATAGTTTAC
ATAGCTTTGCCGAGAGCTGGTCTCGGCAATG-TAGCCTTCTTTTCCGAGAGCTGCTCTCGGAAAAGTTGTGGCACAACAG
TAGGTCTCCCAGACGACGATGTTTTCGAGAGGAGCTCTCGGTAATATATAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTATTTAAGCTATTTCTTTTCTGATCCCTGCAGAGAAAAAAAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTTGTCCACACATAT
>chr5D_1857
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-----------------------------------------------CACTACTAGAATTTTCACGTACGCCGGGTGTAA
TGCTCTTCGCCAAGTGCTAAAACACGGATACTCGGCAAAGCAAACTTTGCCGAGTGTCACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTTACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCA
CTCACGGCAAAGAGGAGCCACGTGGCATGCCCGTCCGCAACAGACGGCTCCGTCAGTTAGTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAA-GCATATGCAACATCCTAT----TTTCTTTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA--ATGACG
ATATCTTTGCCGACAGCCGCTCTCGACAATCCTCCTGACCAGTAGGACAGCGTGACCCACATGGAA-GCTAACAGTTTAC
ATAGCTTTGCGGAGAGCTGGTGTCGGCAATG-TCGCCTTCTTTTCCGAGAGCTGCTCTCGGAAAAGTTGTGGCACAACAG
TAGGTCCTCCAGACAACCATGTTTTCGAGAGGAGCTCTCGGTAATATATAGTTTTCCGAGTGTTGCTCTCGAAAATCTTT
CCCATCCATTCTGCTGTTTAAACTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr4D_1857
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-----------------------------------------------CACTACTGGAATTTTCACGTACGCCAAGTGTAA
TGCTCTTTGCCGAGTGCTAAAACATGGACACTCG----------------------------TCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCCG
CTCACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGCAATAGACGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGTC
GCAGCCCGACACTCGGCAAA-GCATATGCAACATCCTATATATATA--TTTT---TTGTGTGT--GTTCTTTCTAACTGA
CATGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA--ATGACG
ATATGTTTGCCGAGAGCTGCTCTTGGCAATCCTCCTGACCAGTAGGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATAGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGTCTTCTTTTCTGAGAGCTGCTCTCGGAAAAGTTATGGCACAACAG
TAGGTCTCCCAGACGACCATGTTTTCGAGAGTAGCTCTCGGTAATATGTAGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAAGTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>chr2D_1860
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--------------------------------------------------TACTGGAATTTTCACGTACGCAGGGTGTAA
TACTCTTCGCCGAGTGCTAAAACACGAACACTCGGTAAAG-------------GTGTTACTCTCGGCAAACCCAGCTTCA
CGGCAAACTGCCATCTTTGCC-GTCACTGCCTCACGGCAAAGAGGCACCGCACGGCAAACCCTGCAGACGCCGAGAGCTG
CTCACGGCAAAGAGGAGCCACGCGGCATGCCCGTCCGCAACGGACGGCTCCGTCAGTTACTGCGTACTTTACCGAGAGCC
GCAGCACGACACTCGGCAAA-GCATATGCAACATCCTAT----TTTATTTTT---TTGTGTGTGTTTTCTTTCTAACTGA
CGTGTGGTCCCACTGGTCACATTTAT----CAGTAAAAGTTTTAAATAACTTCCTAAATATTCTTGAAAAAA--ATGACG
ATATCTTTGCCGAGAGCTGCTCTCGGCAATCCTCCTGACCAGTACGACAGCGTGGCCCACATGGGA-GCTGACAGTTTAC
ATCGCTTTGCCGAGAGCTGGTCTCGGCAATG-TCGCCTTCCTTTCCGAGAGCGGCTCTCGGAAAAGGTGTGGCACAACAA
TAGGTCTCCCAGACGACCATGTTTTCGAGAGGGGCTCCCGGTAATATGTTGTTTTCCGAGTGTTGCTCTCGGAAATCTTT
CCCATCCATTCTGCTGTTTAAGCTATTTCTTTTCTGATCCCTGCAGATAAAAACAACTACTTGGCAGAAGGATCATATAT
AGGCATAATTTGATCTAGTCCACACATAT
>SNPs
SSS--------------------S----S------------------------S--------------------------
-S---SSSSSSSS-------------------------------------------------------------------
---------------S--------S---------------------S---------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------------
-----------------------------S-----------S--------------------------------------
------------------------------------------S-------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
---S---S-----------------------------S-----S-------------------------------S----
------------------------S-------------------------------------------------------
---S---------------------------------------------S------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------S---------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------SSSSSSSSSSSSSSSSSSSS-----S------------------------------------------------
------------------------S------------------------------------------S------------
---------------------S----------------------------------------------------------
--S--S--------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------------------S-S-------------------------------------------------
-S---SS-------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------S----------------------------
--------------------------------------------S--------------S--------------------
----------------S-------------S------------------------S------------------------
S-------------------------------------------------------------------------------
-----------------------------
>forward_644
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGAGCATCTGAGACTG
AGCC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2318
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCG
ATATCTTTGCCGAGAGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
