>input_sequence_74434
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---------------------ATGTGGACCCGCTGTCTTTTAACACCGGCGCATCTCCAGATCTCCT------CCCAACG
ACCTCAAGCAAGCTACC--CCCGAAGCCACCGCTCAAGACCAAGGAAAAAAAGGAGAATGAAATCCGCGATGCTTCCCCT
GCTCCT---------CCTGCTCGCCGTGGCCGGCCCCGCCGCCGCGAAGCCGACGGCCTACGAGGCGCTCGCGGCCTTCG
ACTTCCCCCCGGGCATCATCCCCAAGGGGGTCGTCTCCTACACCCTCGACAACGCCACCGGCGACTTCACGGCGCACATC
AACTCCTCCTCCACCTGCGAGTTCTCCATCCAGGGCTCCTACTCGCTCCGGTACAAGCCCGACATCAGCGGCCGCATCTC
CGTCGACCGCCTCACCAACCTCCAGGGCGTCACCGTCAAGGTCCTCTTCTTCTGGCTCAACATCGTCGAGGTCACCCGCA
GCGGCGACCAGCTCGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCCTCGACAACTTCCTCGAGAGCCCCACCTGC
GGCTGCGGCTTCGACTGCAACGACCTCCTGCTGCCGCAGTCCACCGCCGAGCCGAGCCTGCGCCTGCGAGGTGCGTTCTA
G-------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G231200
TACCTAAAAGGCAAGATGTGTATTTTTCGTGTGTAAAA--TAGAAGTGTGAGCACAGGTGCGTCATAGAAAGAGAAGTGT
TCATTATTCTAAAAAAGA-AGTGTTTTTACACATCGTATCATAGAGAAGACAAAAAGAATTCTT-AACCAAAGACAAAAT
TTTCTTTCGACTATTTCATGTTTTGTTAGAGCAACTCTAG-CAGACCCCGCAAAAACTTGACCTGCAAAACGCGTTTGCA
GTTTCACGAAGATCGCATTTGCGGGTCGAAAACTAGCGCAGCCGAACAGACACCGTAAAACAAACTGTAAAACTGGAATA
AAGAGCTCCTTCCTCCAGTCCGGCCGTTGCCGCCCCTTCCTCCAGC--------C------------------GGCCGTG
CCCAACCCCGTCGGCCGCGCCC-------------------CGTCGCCAGCAG---------------------GCCATG
CCCCGTCGCCTGTCGGCCGCGCCTCATTGCCCATCGGTCGCGCCCAGTCCCTGC-CGGTCGCGCCCC-------------
-------ATCACCGTGCCGGTCGCGCCCAGCCTC------------------------------------------GCCG
------------------------------------------GCCACGCCCCGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTCTATTGCCAGGCGAGCTGTGCCCCTTTGCCTGCCGCGTC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGACGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGATC
GATTGCGGCGTCTACCGGCCTTTTCCGATGTACGGTGATGAATTCCGGCGAGTTTAGGGCGGATTCCGGTAAACTCCGCG
GCGGCGTGTTTGCTCCGACGAGGTTTGACCGGTATACGGGGCCCCCTATATTCGGCCTTCCAACCTCCAAAGATAAGGGT
TTCAGGTGTGCATTTGTGGTGGCCCTTAAAATTTTTACAGGTTGGACTACTTTTACTGTTTCTATTCTGCACA-TTTTTT
TGCCTAAAATTGTAAAACGCAAAAAT-TATGTGGGTTTGACCACTTATGCGGGGTCTGCTAGAGATGCTGTTAAGCAAGG
TGCACTGTCAGATTAGCTAGCATGTGGACCCGCTGTCTTTTAACACCGGCGCATCTCCAGATCTCCT------CCCAACG
ACCTCAAGCAAGCTACC--CCCGAAGCCACCGCTCAAGACCAAGGAAAAAAAGGAGAATGAAATCCGCGATGCTTCCCCT
GCTCCT---------CCTGCTCGCCGTGGCCGGCCCCGCCGCCGCGAAGCCGACGGCCTACGAGGCGCTCGCGGCCTTCG
ACTTCCCCCCGGGCATCATCCCCAAGGGGGTCGTCTCCTACACCCTCGACAACGCCACCGGCGACTTCACGGCGCACATC
AACTCCTCCTCCACCTGCGAGTTCTCCATCCAGGGCTCCTACTCGCTCCGGTACAAGCCCGACATCAGCGGCCGCATCTC
CGTCGACCGCCTCACCAACCTCCAGGGCGTCACCGTCAAGGTCCTCTTCTTCTGGCTCAACATCGTCGAGGTCACCCGCA
GCGGCGACCAGCTCGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCCTCGACAACTTCCTCGAGAGCCCCACCTGC
GGCTGCGGCTTCGACTGCAACGACCTCCTGCTGCCGCAGTCCACCGCCGAGCCGAGCCTGCGCCTGCGAGGTGCGTTCTA
GGATCCCC-ACCGAGCTCTCTCACAAGTC--------ACAACGGCCCCTTCAAAATTCAGCTAGTTCGTGGATGGATTAT
TCATGCTCTTGTTGCTGGAAGATACCAAGGGGCTGGTAGTATTTTCTAGTGCTGTTCCTGTTTTAGATGGACCAACAATT
TCAGGACTCGATTTCGATGGGTCCGTGTATGAGTGGTGTACTGTTTCATCAGGAAGTTTAGAGTAAAACACTTGAGATCA
ATAAAAGTTTCATGTTCCTAAATAC---CTGTGATCTATTTCATGTTTTGCGCCTTCCATTTTGCGGCATACTGATTGAT
CAGGCAGTT-CTTTTGTGAAATGGAATTCTTCTATTGAATCTTTGCAAACATATCAAGCTGATGT----GCCCAACAAAG
AAG---TTCTAACTCCTGGCTTCTGCATCCATGATTAATCTTCTATATATTCATGTTCTGTGCCCTTCATTTTGTGGCAT
ATT--GATCAATCAGACAGTTCTTTCTTTGAAATGGA--------GGCCTCTTACTGAATCTTTGCAAGCGTATCAAGC-
TGATGCACCCACAAAAGAAGTGCTAGCTCCCCATCCACGATGCGTACAGAATTACAAACCATAAAAGTACGGCCAACACA
TACTTGGAACAAACCAGCTGATACAAATTCTCTGACAGAACGATGAAAGAAAAACCGAATAGCAAAATCACAGCCAATAC
ATATACTGTGGGAACCAACATGCTGATACCAAAGAGTTATT---AAAAAAACTGCTGATACCAAAGTGCTAACAGAAAGA
TGAAAAATCAACTGGAATAGCAAAATCACTCAGGATGCCATGAATCAAGCAGGCTGGAAGGTCGAAGCTGTTTCTTCGAT
CCTACGTATGAATAGTGTGCTAACTA---TTTGGTCTGGCACTTGGAAGCACTACAGGGTGCAAGGTATATTTGTTGGAA
CTAATGCATCACTAGGATGTCATACACATAATTTGATTGCATCTAGATCACCCAATATAACATGAACAGAGAGGGGTT
>chr1A_13
------------AAGATATGTATTTTGTGTGTGTAAAAAATAGGAGAGTGAGCACAGGTGCACCATAGAAAGAGAAGTGT
T--TTATTCTAAAAAAATGAGTGTTTTTACACATCATATCATAGAAAAGACAAAAAAAAAGTCTCAACCAAAGACAAAAT
TTTCTTTCGACTATTTCATTTTTTGTTAGCAG------------------------------------------------
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------------------------------------------------------------------------------GG
TGCACTGTCAGATTAGCTAGCATGTGGACCCGCTGTCT-TTAACACCGGCGCATCCCCAGATCTCCT------CCCAACG
ACCTCAAGCAAGCTACC--CCCGAAGCCACCGCTGAAGAAACAAG--AAAAAGGAGAATGAAATCCGCGATGCTTCCCCT
CCTCCT---------CCTGCTCGCCGTCGCCGGCCCCGCCGCCGCGAAGCCGACGGCCTACGAGGCGCTGGCGGCCTTCG
ACTTCCCCCCGGGCATCATCCCCAAGGGGGTCGTCTCCTACACCCTCGACAACGCCACCGGCGACTTCACGGCGCACATC
AACTCCTCCTCCACCTGCGAGTTCTCCATCCAGGGCTCCTACTCGCTCCGCTACAAGCCCGACATCAGCGGCCGCATCTC
CGTCGACCGCCTCACCAACCTCCAGGGCGTCACCGTCAAGGTCCTCTTCTTCTGGCTCAACATCGTCGAGGTCACCCGCA
GCGGCGACCAGCTCGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCCTCGACAACTTCCTCGAGAGCCCCACCTGC
GGCTGCGGCTTCGACTGCAACGACCTGCTGCTGCCGCGGTCCACCGCCGGGTCAAGCCTGCGCCTGCGAGGTGCGTTCTA
GGATCCCCCACCGAGCTCTCTCACAAGTC--------ACAAGCGCCCCTTCAAAATTAAGCTAGTTCTTGGATGGATTAT
TCATGCTCTTGTTGCTCGAAGATACCAAGGGGCTGGTAGTATTTTCTAGTGCTGTTCCTGTTTTAGATGGACCAACAATT
TCAGGACTCGATTTCGATGGGTCCGTGTGTGAGTGCTGTACTGTTTCATCAGAAAGTTTAGAGTAAAACACTTGAGATTA
ATAAAAGTTTCATATTCCTAAATACTACCTGTGATCTATTCATGTTC---------------TGCGCAGTTCTGATTAAT
CAGACAGTTCCTTTTGTGATATGGAGTTCTTCTATTGAATCTTTGCGAACATATCAAGCTGATGC----GCCCACAAAAA
AATTAATTCTAGCTCCCGGCTTCTGCATCCATGATCAATCTTCTATGTATTCATGTTCTGTGCCCTTCATTTTGTGGCAT
ATTTTGATCAATCAGACAGTTCTTTCTTTGACATGGA--------AGCCTCTTACTGAATCTTTGCAAGCATATCAAGCC
TGATACACCCACAAAAGAAGCGCTAGCTCCCCATCCACGATGCATACAGAATTACAGACCATGAAAGTACAGCCAGCACA
TACTTGGAACAAACCAGCTGATACAAATTCTCTGACAGAACGATGAAAG-AAAACCGAATAGCAAAATCACAGCCAATAC
ATATACTGTGGGAACAAACATGCTGATACCAAAGAGCTTCCTTAAAAAAAACTGATGATACCAAAGTTCTAACAGAAAGA
TGAAAAATTAACTGGAATAGCAAAATCACTCAGGATGCCATGAATCAGGCAGGCTGGAAGGCCGAAGGTGTTTCTTCTAT
CCTATGTATGAATAGTGTGCTAACTACTATTTGGTCTGGCACTTGGAAGCACTACAGGGTGCAGGGTAT-----------
------------------------------------------------------------------------------
>chr5B_179
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTGTAAGAGCAACTCTAG-CAGACCCCGCAAAAACTTGACCCGCAAAACGCGTTTGCA
GTTTCACGAAGATCGCGTTTGCGGG-CGAAAACTAGCGCGGCCGAACAGATACTGTAAAACAAACTATAAAACTGGAATA
AAGAGCTCCTTCCTCCAGTCCGGCCGTTGCCGCCCCTTCCTCCAGC--------C------------------GGCCGCA
CC----------GGCCACGCCCAACCCCGTTGGCCGTGCCCCGTCGCCCGCAGACGATGCTCCCTCGCCCGTCGGCCGCG
CCCC------------------------------------------ATCGCCCATCGGTCGCGCCCC-------------
-------ATCACCGCGCGGGTCGCGCCTAGCCTC------------------------------------------GCCG
GCCACGCCCCATCGCCTTCGTCGTCCGCGCCCAGCCTTGCCGGCCACGCCCCGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTCTATTGCCAAGCGAGCCGTGCCCCTTTGCCTGCCGCGTC
GGGAGAATTCCGGCGGCCATGCTGAGGTCATGGGAGGCCACGACGATGTCGAGCTCGTCCAATTCGAACCGACGGCGATC
GATTGCGGCGTCTAGCGGCCTTTTCCGATGTGCGGTGATGAATTCCGGCGAGTTTAAGGCAGATTCCGGCAAACTCCGCG
GCGGCGCGTTTGCTCCGACGAGGTTTGACCGGTATACGGGCCCCCCTATATTCGGCCCTCCAACCTTCAAAGATAAGGGT
TTCGGGCGTGCATTTGCGGTGGCCCTTAAAAATTTTACGGGTTGGACAACTTTTATGGTTTCTGTTTTGAACACTTTTTT
CGCTCAAAACTATAAAACGCAATTTT-TTTGCGGGTTTGACCACTTATGCGGGGTATGCTAGAGATGCTTTAAG------
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>chr6D_181
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------------------------GTTAGAGCAACTCTAG-CAAACCCCG-AAAAACTTGACCCGCAAAACGCGTTTGTA
GTTTCACGAAGATCGCGTTTGCGGGTCGAAAACTAGCGCGGCCGAACAGATAT------------TGTAAAACTGGAATA
AAGAGATCATTCCTCCAGTCTGGCCGTTGCCGCCACTTCCTCCAGC--------CGGCCGCGCTGGCCACGCCGGCCGCG
CCCAACCCCGTCGGCTGCGCCC-------------------CGTCGCCCGCAGGCCATGCCCCGTCGCCCGTCGGCCGCG
CCCC------------------------------------------GTCCCTGC-CGGTCGCGCCC--------------
----------------------------AGCCTC------------------------------------------GCCG
------------------------------------------ACCACGCCCCGTCGCCTCCGTCGTCCGCGCCCAGC-CT
TGTCGGGCACGCCCCGTTGCCTCCGTCGTCCGGGCCTTGCTCTATTGCCAGGCGAGCCGTGCCCCTTTGCCTGCCGCGTC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGACGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGATC
GATTGCGGCGTCTAGCGGCCTTTTCTGATGTGCGGTGATGAATTCCGGCGAGTTTAGGGCGGATTCCGGCAAACTCCGCG
GCGACATGTTTGCTCCGACGAGGTTTGACCGGTATACGAGGCCCCCTATATTCGGCCTTCCAACCTCCAAAGATAAGGGT
TTCGGGTGTGCATTTGCGGTGGCCCTTAATTTTTTTACGGGTTTGACTACTTTTACGGTTTCTGTTTTGGACA-CTTTTT
TGCCCAAAACTGTAAAACGTAATTTT-TTTACGGGTTTGACCACTTATGCGGGGTCTGCTAGAGATGCTCTTA-------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr6A_181
GTTAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGCAACTCTAG-CAGACCCCACAAAAACTTGACCCGCAAAACACCTTTGCA
GTTTCACGAAGATCGCGTATGCGGGTCAAAAACTAGCGCGGCCGAATAGAT------------ACTGTAAAACTGAAATA
AAGAGCTCCTTCCTTCAGTCCGACCGTTGCCGCCCCTTCCTCCAGC--------T------------------GACCGTG
CC----------GGT----------------------------------------------------CCCGCCGGCCGCG
CCCC------------------------------------------ATCGCCCATCGGTCGCGCCCCGTCCCTGCCGGTC
GCGCCCCATCACCGCGCCGGTCGCGCCCAGCCTC------------------------------------------GCCG
------------------------------------------GCCACGCCCCGTCGCCTCCGTTGTCCGCGCCCAGC-CT
TGCCGGCCACGCCCCGTCGCCTTCGTCGTTCGCGTCTTGCTCTATTGCCAGGCGAGTCGTGCCCCTTTGCCTGCCGCGTT
GGGAGGATTCCGGCGGCCAGGCTGAGGTAATGGGAGGCCACGACAATGTCGAGCTCGTCCAATTCAAACCGACAGTGATC
GATTGCGGCGTCTAGCGGCCTTTTCCGATGTGCGGTGATGAATTCCAGCAAGTTCAGGGCGGATTCCGGCAAACTCCGCG
GCGGCGTGTTTGCTCTGACGAGGCTTGACCGGTATACGGGCCCCCCTATATTCGGCCTTCCAACCTTCAAAGATACGGGT
TTCGGGTGTGCATTTGCGGTGGCTCTTAAAAAATTTACGGGTTGGACTACTTTTACGGTTTCTGTTCTGGACATTTTTTT
CGCCCAAAACTGTAAAACATAATTTT-TTTGCGGGTTTGACCGCTTATGCGGGGTCTGCTAGAGATGCTCTTA-------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1D_182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTAGAGCAACTCTAG-CAGACCCTGCAAAAACTTAACCCGCAAAACGCGTTTGCA
GTTTCACGAACATCGCGTTTGCGGTTCGAAAACTAGTGCGGCCAAACAGATACAGTAAAACAAACTGTAAAACTGAAATA
AAGAGATCCTTCCTCCAGTCCGGCCGTTGCCGCCCCTTCCTTCAGC--------C------------------GGCCGCG
CC----------GGCCACGCCC-------------------CGTCGCCCGCAGGCCATGCCCCGTCGCCCGTCGGCCGCG
CCCC------------------------------------------ATCGCCCATCGGTCGCGCCCC-------------
-------ATCACCGCGCCGGTCGCGCCCGGCCTCGCCGGCCACGCCGCGTCACCTCCGTCGTCCGCGCCCAGCCTTGCCG
------------------------------------------GCCACGCCCCGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTATATTGCCAGGCGAGCCATGCCCCTTTGCCTGCCGCGTC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGACGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGATC
GATTGCGGCGTGTAGCGGCCTTTTCTGATGTGCGGTGATGAATTCCGGCGAGTTTACGGCGGATTCCGGCAAACTCCGCG
GCGGCGTGTTTGCTCCGACGAGGTTTGACCGGTATACATGGCCCCCTATATTCGGCCTTCCAACCTTGAAAGATAAGGGT
TTCGGGTGTGCATTTGCGGTGGCCCTTAAAAAATTTACGGGTTGGACTACTTTTGCGGTTTCTGTTCTGGACACTTTTTT
CGCCCAAAACTGTAAAACGCAAAAAAA-TTACGGGTTTGACCACTTATGCGGAGTCTGCTAGAGATGCTCTTA-------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr5A_182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTAGAGCAACTCTAGCAAGACCCCGCAAAAACTTGACTTGTAAAACACGTTTGCA
GTTTTATGAAGGTTGCGTTTGTGGGTCGAAAACTAGTGTGGCCAAACAGATACTGTAAAACAAGCTGTAAAACTGGAATA
AAGAGATCCTTCCTTTAGTCCGGCCGTTGCCGTCCCTTCCTCCAGC--------C------------------GGCCGCG
CCCAACCCCGTCGGCCGCGCCC-------------------CGTCGCCCGCAA---------------------GCCACG
CCCC------------------------------------------ATCGCCCATCGGTCGCTCCCCGTCCCTGCA----
------------------GGTCGCGCCCAGCCTCGCTGGCCACGCCCTGTCGCCTCCGTCATCCGCGCCCAGCCTTTCCG
------------------------------------------GCCACGCCCCGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTCTATTTTCAGGCGAGCCGTGCCCCTTTGCCTGCCACATC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGGCGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGAGC
GATTGCAGCGTCTAGCGGCCTTTTCCGATGTGCGGTGATGAATTCCAACAAGTTTAGGGCGGATTCCGGCAAACTCCGCA
GCGGTGTGTTTGCTCCGATGAGGTTTGACCGGTATACGGGGGCCCCTAAATTCGGCATTCCAACCTCCAAAGATAAGGGT
TTCGGGTGTGCATTTGTGGTGGCCCTTAAAAATTTTAGGGATTAGACCACTTTTACGGTTTCTGCTCTGGACACTTTTTT
CGCTCAAAACTGTAAAACACAAATTT-TTTACGGGTTTAACCATTTATGTGAGGTCTGCTAG------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr4D_184
--------------------------------------------------------------------------------
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---------------------------AGAGCAACTCTAG-CAGACCCCGCAAAAACTTGACCCGCAAAACGCGTTTGCA
GCTTCATGAAGATCGCGTTTGCGGGTCAAAAATTAGCGCGGCCGAACATATACTGTAAAACAAACTGTAAAACTGGAATA
AAGAGCTCCTTCCTCCAGTCCGGCCGTTGCCGCCCCTTCCTCCAGC--------C------------------GGCCGCG
CC----------GGCCACGCCC-------------------CGTT----------------------------GGCCGCG
CCCC------------------------------------------ATCGCCCATCGGTCGCGCCCCGTCCCTGCCGGTC
GCGCCCCATCACCGCGCCGGTCGCGCCCAGCCTCGCCGGCCACGCCCTATCGCCTCCGTCGTCCGTGCCCAGCCTTGCCG
------------------------------------------GCCACGCCACGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTCTATTACTAGGCGAGCCGTGCCCCTTTGCCTGCCACGTC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGACGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGAGC
GATTGCGGCGTCTAGCGGCCTTTTCCGATGTGCGGTGATGAATTCCGGCGAGTTTAAGGCGGATTCCGGCAAACTCCGCG
GCGGCGTGTTTGCTCCGACGAGGTTTGACCGGTATACGGGGGGCCCTAAATTCGGCCTTCCAACCTCCAAAGATAAGGGT
TTCGGGTGTGCATTTGCGGTGACCCTTAAAAATTTTACGGGTTGGACCACTTTTACGGTTTCTGTTCTGGACACTTTTT-
CGCCCAAAACTGTAAAACGCAAATTT-TTTACGGGTTTGACCACTTATGCGGCGTCTGCTAGAGATGCTCTT--------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr5A_184
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGAGCAACTCTAG-AAGACCCCGGAAAAACTTGACCCGCAAAACGCGTTTGCA
ATTTCACGAAGATCGCGTTTGCGGGTCAAGAACTAGCATAGCCGAACAGATACTATAAAGCAAACTATAAAACTGGAATA
AAGAGCTCCTTCCTCCAGTCCGGCCGTTGCCGCCCCTTCCTTCAGCGGCTGCGCC------------------GGCCGCG
CCCAACCCCGTCAGCCGCGCCC-------------------CGTCGCCCGCATGCCATGCCCCATCGCCCGTCGGCCGCG
CCCC------------------------------------------ATCGCCCATCGATCGCGCCCCGTCCCTGCTGGTC
GCGCCCTATCACCGCGCTGGTCGCGCCCAGCCTC------------------------------------------ACCG
------------------------------------------GCCACGCCTCGTCGCCTCCGTCGTCCGCGC--------
-----------------------------------CTTGCTCTATTGCCAGGCGAGCCGTACCCCTTTGCCTGCCGCGTC
AGGAGGATTCCGGCGGCCAGGCTGAGGTCATGGGAGGCCACGACGACGTCGAGCTCATCCAATTCGAACCGGCGGCGATC
GATTGCGGCGTCTAGCGGCCTTTTTTGATGTGCGGTGATGAATTCTGGCGAGTTTAGGGCGGATTCCGGCAAACTCCACG
GCGGCGTGTTTGCTCTGACGAGGTTTGACCGGTATACGGGGGGGCCTAAATTCGGCTTTCCAACCTCCAAAGATAAGGGT
TTCGGGTGTGCATTTGCGGCGGCCCTTAAAAATTTTACGGGTTGGA----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1B_276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GCCGAACAAACACTGTAAAATAAACTGTAAAACTGGGATA
AAGAGCTCCTTCCTCCAGTCCGGCCGCTGCCGCCCCTTCCCCCA--------GCC------------------GGCCGCT
CCCAACCCCGTCAGTCGCGCCC-------------------CGTCGCCCGCCGGCCGTGCCCCGTC-CCTGCCGGCCGCA
CCCA------------------------------------------ATC-------------------------------
----------ATCACGCCAGCTGTGCCCAGCCTCGCCGGCCGCTCCCCATCACCA-CGTCGGCTGCGCCCAGCCTCGTCG
------------------------------------------GCCACGCTCCGTCGCCTCCGTCGTTCGCGC--------
-----------------------------------CTTTCTCTATTGCCAGTCAAGCCGTGCCCCTTTGCCTGCCGGGTC
GGGAGGATTTCGGCGGCCAAGCTGAGGTCATGGGAGGCCACGGCGATGTGGAACTCGTCTAATTCGAACCAGCGGCAATC
AATTGCGACGTCTAGCGGCCTTTTCTGATGTGCGGTGATGAATTCCGGCGAGTTTACGGCGGATCCCAAAAAACTCTGCG
GAGGCGTGTTTGCTTCGACGAGGTTTGACCAGTATACGGGGCCCCCTAGATTCGTCCTTCCAACCTCCATAGATAAGGGT
TTCGTGTGTGCATTTTCGGTGGCCCTTAAAAAATTTATGGGTTGGACCACTTTTACGGTTTCTGTTCTGGACAATTTTTT
CGACCAAAACTATAAAACGC-AAATT-TTTACGGGTTTGACCACTTATACGGGGTCTGCTAGAGATGCT-----------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3D_277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CCGAACAGATACTATAAAACAAACCGTAAAACTGGAATA
AAGAGCCACTTCCTCCAGTCCGGCCGCTCCCGCCCCTTCCTCCA--------GCC------------------GGCCGCG
CCCAACCCCGTCGGCCGCGCCC-------------------CGTGCCCCGTCGGCTGT----------------------
--------------------------------------------------------------GCCCCGCCCCTGCCTGCC
GCGCCCCATCACCGCGCTGGCCTCGCCCAGCCTC------------------------------------------GCCG
------------------------------------------GCCACGCCCCGTCGCCTCCGTCGTCCGCGCGCACAGCT
TGCCGGCCACGCCCCGTCGCCTCCGTCGTCCGTGCCCTGCTCTATTGCCAGCCGAGTCGTGTCCCTTTGCCTACCGCGCC
GGTAGGATTCCGGCGGCCAAGCTGAGGTCATGGGAGGCCACGGCGATGTCTAGCTCGTCCAATTTGAACCGGTGGCGATC
GATTGCGGCGTCTAGCGGCCTTTTCCGGTGTGCGGTGATGAATTCCAATGAGTTTAGGGCGGATTCCGACAAACTCCGCG
GGGACGTGTTTGCTCCGACGAGGTTTGACCGGTATACGGGGCCCCCTAGATTCGGCCTTCCAACCTCTAAAGATAAGGGT
TTCGGGTGTTCATTTGCGGTGGCCCTTAAAAATTTTACGGGCTGAACCACTTTTACGGTTTCTATTCTGGACGCTTTTTT
CGCCCACAACTGTAAAACGC-AAAAAATTTACGGGTTTGACCACTTATGCGGGGTCTGCTAGAGATGCT-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr7D_327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTCCAGTCAGGCAGCTACCGCCCCTTCCTCCA--------GCC------------------GGCC---
----------------GCGCCC-------------------CGTCGCCCGCAGGCCATGCCCCGTCGCCCGTCGGTCGT-
--------------------------------------------------------------GCCCCGCCCCTGCTGGCC
GCGCCCCATCACCGCGCTGGCCGCGCCCAGCCTC------------------------------------------GCCG
------------------------------------------GCCACGCCCCGTCGCCTTCGTCGTCCGT--GCACAGCT
TGCCGGCCACGCCCCGTCGTCTCCGTCGTCCGCGCCTTGCTCTATTGCCAGCCGAGTCGTGCCCCTTTGCCTGCCGCGTC
GGGAGGATTCCGGCGGCCAGGCTGAGGTCATGG----CCACGACGATGTCGAGCTCGTCCAATTCGAACCGGCGGCGATC
GATTGCGGCGTCTAGCGGCCTTTTCCGATGTGCAGTGATGAATTCCGGCGAGTTTAGGGCGGATTCCGGCAAACTCCGCG
GCGGCGTGTTTGCTCCGACAAGGTTTGACCGGTATACGGGGCCCCCTATATTCGGCCTTCCAACCTCCAAAGATAAGGGT
TTCGGGTGTGCATTTGCGGTGGCCCTTAAAAAATTTACGG-TTGGACTACTTTTACGGTTTCTGTTCTGGCAACTTTTTT
TGCCCAAAACTGTAAAGCGC-AAAAAATTTATGGGTTTGACCACTTATGCGGGGTCTGCTAGAGATGCT-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1B_968
TGTTAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGG
TGCGCCATCAGATTAGCTAGCATGTGGACCCTCTGTC--TTAACACCGTCGCATCTCCAGATCTCTTGTGAAACCCAACG
ACCTCAAGCTAACCCCGAACCCGAAGCCACCGCTCAAGAGAAAAA--ACAAC----AATGAAATCCGCGATGCTTCCCCT
CCTCCTTGTGCTCCCCCTGCTCGCCGTCGCCGGCCCCGCCGCCGCGAAGCCGACGGCCTACGAGGCGCTCGCGGCCTTCG
ACTTCCCCCCGGGCATCATCCCCGAGGGGGTCGTCTCCTACACCCTCGACAACGCCACCGGCGACTTCACGGCGCACATC
AACTCCTCCTCCACCTGCGAGTTCTCCATCCAGGGCTCCTACTCGCTCCGCTACAAGCCCGACATCAGCGGCCGCATCTC
TGTCGACCGCCTCACCAACCTCCAGGGCGTCACCGTCAAGGTCCTCTTCTTCTGGCTCAACATCGTCGAGGTCACCCGCA
GCGGCGACCAGCTCGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCCTCGACAACTTCCTCGAGAGCCCCACCTGC
GGCTGTGGCTTCGACTGCAACGACCTCCTGCTGCCGCAGTCCGCCGCCGAGTCGAGCCTGCGCCTGCGAGGTGCGTTCTA
GGATCCCC-ACCGAGCTCTCTCACAAAGTCACAAGTGACAAGCGCCCCTTCAAAATTCAGCTAGTTCTTGGATGGAT-AT
TCTTGCTCTTGTTGCTGGAAGATACGAAGGGGCTAGTAGTATTTTCTAGTGATGTTCCTGTTTTAGATGGACCAACAATT
TCAGGACTCGATTTCGATGGGTCCGTGTGTGAGTGCTGTACTGTT---TCAGAAAGTTTAGAGTAAAACACTTGAGATCA
ATAAAAGTTTCATATTCCTAAATAC---CTGTGATCTAGTTCATGTTCTGCGTCTTCCATTTTGTGGCATACTGATTAAT
CAGGCAGTT-CTTTTGTGAAATGGAATTCTTCTATTGAATCTTTGCAAACATATCAAGCTGATACATACGCCCAACGAAG
AAG---TTCTAGCTCCTGGCTTCTGCATCCATGATTAATCTTCTATGTATTCATGTTCTGTGCCCTTCATTTTGTGGCAT
ATT--GATCAATCAGGCAGTTCTTTCTTTGAAATGGAGGCCTCTAGGCCTCTTACTGAATCTTTGCAAGCATATCAAGC-
TGATACATCCACAAATCAAGTGCTAGCCCCCCATCCACGATGCATACAGAATTACAGACCATAAAAGTACAGCCAACACA
TACTTGGAACAAACCAGCTGATACAAATTCGCTGACAGAATGATGAAAGAAAAACCGAATGGCAAAATCACACCCAGTAC
ATATACTGTGAGAACAAACCTGCTGATGAAGAGTTG---------------CTGCTGATATCAAAGTGCTAACAGAAAGA
TGAAAAATTAACTGAAATAGCAAAATCACTCAGGATGCCATGAATCAGGCAGGCTGGAAGGTCGAAGCTGTTTCTTCGAT
CCTATGTATAAATAGTGTGCTAACTA------------------------------------------------------
------------------------------------------------------------------------------
>SNPs
-SSSSSSSSSSS-----S--------SS---------------S--S--------------SS-----------------
-SS-------------SS-----------------S---------S----------S--SSSS-----------------
-------------------S------------------------------------------------------------
----------------S------------------------------------S--------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------S----------------S-------------------------------------S----------
--------------------------------------------------------------------------------
---S----------------------------------S-----------------S------------S----------
----S----S------------------S----------------------------------------S---SSSS---
--------------------------------------S-----------------------------------------
---------------------------------------SS--S-SS---------------------------------
S--------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----------------------------------------SS------------------------S------------
--------------------------------------------------------------------------------
----------------------------S------S----------------S---------------------------
-------------S---------------------------------S----S------------------------S--
----------------------------------------------------------------S---------------
-----------S----------------------------------S---------------------------------
----------------------------------------------------------------------S---------
----S--------------------------------------S------------S-------------S---------
--------------------------------------------------------------------------------
---------------S--------------------S-SSS---------------------------------------
--------S--------------------------------------S--------------------------------
----S----------------------------------------------------------S-----SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1190
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GGGGTCTGCTAGAGATGCTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ACTCCTGGCTTCTGCATCCA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
