>input_sequence_74432
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------ATGAAAACCATCTTCTTCTTCCTCCTCCTCCTCCCCATCA
ACACTTGCTCTGCTAACAACACCACCCAACTAGTCTATGACA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAAGGCAACGTGC
TAAATAGCAAGTCAAATTACTACATGCTCCCAGCAAAACCTGCGAGCGGTGGCGGCCTCAAAGCCGTCCCAACCGGTCTA
CGGTGCCTACATTTTGTGGTCCAGGAGCGCAGCGAGAC---TCTCCTCGGCACACCCCTGCGATTCACGCCATTGCCAGA
ACACGCTTCAGCCACTGAGCCGATCTGCCTGTCGAGTGACATATGGATCGA------------------------GTTCC
ACGACTTGAGAAGCTTTTGCTCCGACGTGCTAGATTGGCACCTTACCGAACAGGTGCCGGAGTCGTCATCAGGAGAGCCT
AAACACGTGGCCGCCGGTAGTGAAGAGGGCCTAAGATCG-TTTGGGGTGTTCCGGGTTGAGAGGCATGGCACAGATCTCT
CCGGATATAAAATAGTTTCATGTGCTAGCAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACGTGG
CTCACCGTGAGCAATGAGCCTTTTATGGTTGTCTTTAGGAAAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AACTATATAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G341300
TTGAAAAGTTGAAAAATTCGAAACAAAAATCCCACGTATATATCCGGACATTTTATGTGCATTCACAAGGTTTCGGTGAA
AAACGACGTTTTTATGGCTTGTGTAAAAAAGATAAAGAAATGCCTAGTGAATAGTTAGAATGAAGCATCAAAATTTGTTT
ATACAAGCCACAAAAAATGTCGTTTTTCATTGAAACCTTGTGCACGCACATAAAATGTCTGGATATACATGCGGGATTTT
TGTTCCGAATTTTTCAACTTTTCAAAATGTGTATTTCGATAATGGGTGCATATGCACCTAGGAGCCAAAGGCAATTACCG
TATTTTAGCGAGAAACAAAATACTGAGTATCTTTAATTGGTCATACCTTCATTTGAGAGAGAGCTTGTTAAGATTTTTTT
TTGCAAAATCGTACATTTTTTGCTCCTCTAGGTCGAAGCGTCTGCCCGCTGTTCCAAAGAAGAATTTGCTCCACCATGAT
TTGTGCACGTACGCAGTTGATTGTGTGAAGGCTTCTCTCTCCCACTAATTACCTTGGTAAATACCACATAGTGTATACAT
TAATACATGCATACACTAATACAATCCACGTGGCCGCCATTATCCTTGGCCCTCTCCGCACTGTGTTGATCCGGTCGGTG
TCATGCTTAGCCATCGTATGGCGTAGATGTGGTCAGATGGGAAGCGTCCAATACACCACATGACATATATGGTAAGCTAT
GTAAAAAAACACAACATATCGAAGCGGTTCCCTTATCATATTTACAAGACAATATGTATTACAGTAATATTTGTCCAAAG
TTAACTCCATATAAATGTGCCCTTCAAAAAGGCTGCATAAAAGGTATGATTTTAATGGCTGAAATTACGGGAATCATCCG
AATCAACATGGCCCATAAATGGTGGCTGCATACTGTCTATATAAACCCAAGCCAACTCAGATCCTCAAGAAATAACATAG
ACTGAAAAACAATTGTTGTCAAACGTTTAGATCGACTGGCATGAAAACCATCTTCTTCTTCCTCCTCCTCCTCCCCATCA
ACACTTGCTCTGCTAACAACACCACCCAACTAGTCTATGACA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAAGGCAACGTGC
TAAATAGCAAGTCAAATTACTACATGCTCCCAGCAAAACCTGCGAGCGGTGGCGGCCTCAAAGCCGTCCCAACCGGTCTA
CGGTGCCTACATTTTGTGGTCCAGGAGCGCAGCGAGAC---TCTCCTCGGCACACCCCTGCGATTCACGCCATTGCCAGA
ACACGCTTCAGCCACTGAGCCGATCTGCCTGTCGAGTGACATATGGATCGA------------------------GTTCC
ACGACTTGAGAAGCTTTTGCTCCGACGTGCTAGATTGGCACCTTACCGAACAGGTGCCGGAGTCGTCATCAGGAGAGCCT
AAACACGTGGCCGCCGGTAGTGAAGAGGGCCTAAGATCG-TTTGGGGTGTTCCGGGTTGAGAGGCATGGCACAGATCTCT
CCGGATATAAAATAGTTTCATGTGCTAGCAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACGTGG
CTCACCGTGAGCAATGAGCCTTTTATGGTTGTCTTTAGGAAAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AACTATATAGGTGTTTTTTT---GCTTGCTTCTCGAGGTAATCCATGTAGGCATGTTCATTG
TATCGCCACTGTGGTGTTCATGTTATGTAATGTGTTCCACCACTTTGCAATAAAGCGATACTAACTCTATCATGTGAAAA
GAGGGGGTAAGAGGGACCATATTAAAATTGCTCATGGTAATAACTAACAGATATAGTTAGTTATTTGAATAAT-TTTCTT
TTAAATGGGTTGATGACCCTCCAGACTGGATCCTTTCTGTCTTGGCAAATGATGTAATCGTTGTTTAAGTTAATAAAGCT
AGCCATGATGGCCTCTTCCTCAAAAAAAAAAATTAGCATCTAATTCTCCCTGGCGCACGAGGGATACTTTTATTTATGGG
GCGTGCTACGCGTTTGCTGGCTGATCTTTGTGAAAGATCGGCCGGGTCGCGAGCCATTAGATCTGATTGGCATATGGCGT
CATCCAACGGCCGAGCGTTGCCATCACCATTGCAACAGAGGGCTATGTTGCAGAACCCTTTGCAACAGAGTTTATGTTGC
AGAAATTTTTGCAACAAAGATGATGTTGCAGGTTTTTTTATCTTCATTCACTTTTTCTGCAATATATGTGTTGTCGCGGG
AGGAACTTTTGCAACACAGATGATGTCGCGGAAAACATTGCAACAAAAATGAGGTTGCAGAAACGCCACTGTTGTTGCCG
ACAACACCTATGACTGAAGCCAGTCACATCAGCTGCCATGGCGGCGGGGCGTTGCAGGGTGAGACAATCCAGTGGCGGGG
TGTCACGGATCTTGTGGTAGACAGTGGAGGTGAGGTGGGCGGCCGAAGTAGGTGCAAGCATCGGCAGGTTGGGTGAACAT
GAGCGATGGCCGGCGACGAACGCACCATTAACGATGCGATGGTGCGAGGCAGGTGCATGCATGGTTGTCGAGAAGCACGG
GATGTAAAATGAGAGAGAGAGATGGGAGATGACAACTGTGTGAAAACATGTGAACAAGAGAGAGCATACAAC
>chr1D_1013
TTCTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CCTCCT
CCATCTCCTCGCCATCACCACCCTGCCTTGCTCTGCCAACAACGCCACCCAACTGGTCTATGACATAGAAGGCAACGTGC
TAAATAGCAAGTCAAATTACTACATCCTCCCAGCCAAACCTGCGAGCGGTGGTGGCCTCAAAGCTGTCCCAACCGGTCTA
CGGTGCCTACATTTTGTGGTCAAGGAGCGCAGCGAGAC---TCTCCTCGGCACACCCCTGCGATTCACTCCGTTGCCAGA
ACATGCTTCTGCCACTGAGCCGATCCGCCTGTCGAGTGACATATGGATCAA------------------------GTTCC
ACGACTTGAGAAGCTTTTGCTCTGATGTGCTAGATTGGCACCTTACCGGACAGGTGCCGGAGTCGTCATCAGGAGAGCCT
AAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCG-TTTGGGGTGTTCCGGGTTGAGAGGCATGGCATAGATCTCT
CGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACATGG
CTGACTGTAAGCGATAAACCTTTTTTGGTTGTGTTTAGGAAAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GACTATATAGGTGGTTTTTT---GCTTGCTTCTCGAGGTGATCCGTGTAGGCATGTTCATTG
TATCGCCACAGTGGTGTCCATGTTATGTAATGTGTTCCACCACTTTCGAATAACGCGATACTAACTATATCATGTGAAAA
GAGGAGCTAAGAGGGACCATGTTAAAATTGCTCATGATAATAACTAGCAGCCAGAGTTAGTTATTTGAATAAA-GTTCTT
TTAAATGGGTTGATGACCCTCCAGACTGGATCCTTTCTGTCCTGGCAAATGATGTAATCGTTGTTCAAGTTAATAAAGCT
AGCCATTATGGCCACTCCCTAAATAGAAAAATCTAGCATCTAATTTTCCCTGGCGCATGAGGGAATACTTCTGTTT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_1044
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CTTGCTGTGCCAACAACGCCACCCAACTAGTATATGACACGGAAGGCAACGTGCTAAGTAGCAAGCAAAATTACTAC
ATCCTCCCTGCTAAACGTGCGAGCGGCGGGGGGCCTCGGAGCTTTGCCTACTGGCCTGCGGTGTCTGCACTTTGTGTTCC
AGGAGCGCAACGAGGCTGTCCTCGGCACCGCCCTGCGGTTCACGCCACTACCAGAACACGCTTCAGCCTGCGAGCCGATT
CGCTTGTCGAGCAACATCTGGATCGAGTTCCATGATTTTGATAGTTTTTGCTCTGAGGGGCTAGATTGGCACCTTACCAA
TCAGGTACCGGAGTCGTCATCAGGAGAGCCTAAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCGTTTGCGGTGT
TCCGGGTTGAGAGGCATGGCACAGGTCTCTCGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAAAGATTTA
GGTTTGCATGCTACTAAGGACAAGACGTGGCTGACCGTGAGCAATAAGCCTTTTATGGTTGTCTTCAGGAAAGAGAGGTT
ATAGGTGTTTATTTTGTTTTTGCTTGTTTCTGGTGTTGATCTGTGCTCGAGTTCATTGTATTGCAAATTAAACTTATGCT
TCTGGCACGAGTCAAGAATGTGCTGTATTCTGCATACAGTATGAAGAACAT--ACTAATCTTATGCAGACTAAACTTGGT
GCTTTGAAGATGCTCATTCGAAAAACTAGATGGCATACTGCTCTGTCCTAACTGT------------------------C
GGTGTCCTACTCAAA-TTTTCTTGCCTGTGGTGCTAGTGCTATCGTTCTTACATCATGTTATTTGCAATGACAGCTCAAG
ATGGAGATGCCTCAAACCAAGGAAACTAGCACTTGCAACATACGAAGGAGTTGCTCCTTGAATATGTTGTCCCTCCTCCT
CCATCTCCTCGCCATCGCCACCCTGCCTTGCTCTGCCAACAACGCCACCCAACTGGTCTATGACACGGAAGGCAACGAGC
TAAATAGCAAGTCAAATTACTACATCCTCCCAGCTAAACCTGCGAGCGGTGGCGGCCTCAAAGCCGTCCCAACTGGTCTA
CGGTGCCTACATTTTGTGGTTGAGGAGCGCAGCAAGGC---TCTCTTCGGCACACCCCTGCGATTCACGCCGCTACCAGA
ACACGCTTCAGCCAGTGAGCCGATCCGCTTG------------------------TCGAGTGACATATGGATCGAGTTCC
ATGACTTGAGAAGCTTTTGCTCTGAAAGGCTAGATTGGCACCTTACAGAACAGGTGCCGGAGTTGTCATCAGGAGAGCCT
AAACATGTGGCCGCCGGCAGTGAAGAAGGCCTAAGATCATTTTGGGGTGTTCCGGGTTGAGAAGCATGGCACGGATCTCT
CGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACATGG
CTGACTGTAAGTGATAAACCTTTTATGGTTGTGTTTAGGAAAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GATTATATAGGTGTTTTTTTTTTGCTTGCTTCTCGAGGTGATCCACGTAGGCGAGTTCATTG
TATCGCCACTGTGGTGTTCATGGTATGTAACGTGTTCCACCACTTCGCAATAAAGCGATACTAACTATGTTATGTGAAAA
GAGGGCCTAAGAGGCACCATGTTAAAATTGCTCATGATAATAACTAGCAGCTATAGTTAGTTATTTTAATAA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_1044
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CTTTCTCTGCCAACAACGCCACCCAACTAGTCTATGACACGGAGGGCAATGTGCTAAGTAGCAAGCAAAATTACTAC
ATCCTCCCTGCTAAACGTGCGACCGGCGGGG-GCCTCAGAGCTTTGCCTACTGGCCTGCGGTGTCTGCACTTCGTGTTCC
AGGAGCGCAACGAGGCTGTCTTCGGCACCGCCTAGCGATTCACGCCACTACCAGAACACGCTTCAGCCAGCGAGCCGATT
CGCCTGTCGAGCGACATCTGGATCGAGTTCCATGATTTTGATAGCTTTTGCTCTGAAAGGCTAGATTGGCACCTTACCAA
TCAGGTACCGGATTCGTCATCAGGAGAGCCTAAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCGTTTCCGGTGT
TCCGGGTTGAGAAGCATGGCACAGGTCTCTTGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAAAGATGTA
GGTTTGCATGCTACTAAGAACAAGACGTGGCTGACCGTGAGCAATAAGCCTTTTATGGTTGTCTTCAGGAAAGAGAGGTT
ATAGGTGTTTTTAGC--TTTTGCTTGTTTCTGGTGTTGATCTGTGCGCAAGTCCATTGTATTGCAACAGGAA---ATGCT
TCTGGCACGAGTCAAGAATGTGCTGTATTCTGCATACAGTATGAAGAACATGTACTGATCTTATGCAGATTAAACTTGGT
GCTTCGAAGACGCTCATTTGAAGAACTAGATGGCATACCGCCCTGTCCTAACTGTTGATTGTTGTTCATTCTTCTATGTC
GGTGTCCTACTCATTTTTTTCTTGCCTGTGGTGCTAGTGCTACCATTCTTACGTCATGTTATTTGCAATGACAGCTCAAG
ATGGAGATGCCTCAAACTAGGGAAACTAGCACTTGCAACTTACCAAAGAGTTGCCCCTTGAATATGTTCT---TCCTCCT
CCGTCTCTTCGCTATCGCCATCCTGCCTTGCTCTGCCAACAACGCCACCCAACTGGTCTATGACACAGAAGGCAACGAGC
TAAATAGCAAGTCAAATTACTACATCCTCCCAGCCAAACCTGCAAGCGGTGGCGGCCTCAAAGCCATCCCAACCGGTCTA
CGGTGCCTACATTTTGTGGTCGAGGAGCGCAGCGAGACGACTCTCCTCGACACGCCCATGCGATTCATGCCGTTGCCAGA
ACACGCTTCTACCACTGAGCCGATCCGCCTTTCGAGTGACATATGGATCCGCCTTTCGAGTGACATATGGATCGAGTTTC
ACGACTTGAGAAGCTTTTGCTCCGAAAGGCTAGATTGGCACCTTACCGAACAGGTGCCGGAGTCGTCATCAGGAGAGCCT
AAACACATGGCTGCCGGCAGTGAAGAGGGCCTAAGATCA-TTTGGGGTGTTCCGGG--------------ACGGATCTCT
CGGGATATAAGATAATTTCATGTGTTGGCAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTACAAGGACAAGACATGG
CTGACTGTAAAGGATAAACCTTTTATGGTTGTGTTTAGGAAAAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GACTATATAGGTGTTTTTTT---GCTTGCTTCTTGAGGTGATCCCTGTAGGCGAGTTCATTG
TATCGCCACTGTGGTGTTCATGTTATGTAATGTGTTCCCCCACTTTGCAATAAAGCGATACTAACTATATTATGTGAAAA
GAGAGGCTAAGAGGGACCATGTTAAAGTTGCTCATGATAATAACTAGCAGCTATAGTTAGTTATTTTAATAAGCTTTCTT
TTAAATGGGTTGATGACCCTCCAGGCTGGATCCTTTCTCTCCTGGCAAATGATGTAATTGTTGTTTAAGTTAATAAAGCT
AGCCTTGATGGCCTCTCTCTCAA---AAAAATAGAGCATCTATTTTTTCCTGGCGCATGAGGGATACTTTTATTTATGAG
GCGTGCTACGTGTCTGCCGGCTGATGTTTTTAAAAGATCGGCCGGGTCGCGAGCCATTAGATCTGGCTGGCATATGGCG-
--TCCAACGGCCG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1A_1044
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---CTTGCTCTGCCAACAACGCCACCCAACTAGTCTATGACACGGAGGGCAACGTGCTAAGTAGCAAGCAAAATTACTAC
ATCCTCCCTGCTAAACGTGCGACCGGCGGGG-GCCTCAGAGCTTTGCCTACTGGCCTGAGGTGTCTGCACTTCGTGTTCC
AGGAGCGCAACGGGGCTGTCCTCGGCACCGCCCTGCGGTTCACGCCACTACCAGAACACGCTTCAGCCAGCGAGCCGATT
CGCTTGTCGAGGGACATCTGGATCGAGTTCCATGATTTTGATAGTTTTTGCTCTGAAAGGCTAGATTGGCACCTTACCGA
TCAGGTACCGGAGTCGTCATCAGGAGAGCCTAAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCGTTTGCGGTGT
TCCGGGTTGAGAGGCATGGCACAGGTCTCTCGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAAAGATGTA
GGTTTGCATGCTACTAAGAACAAGACGTGGCTGACCGTGAGCAATAAGCCTTTTATGGTTGTCTTTAGGAAAGAGAGGTT
ATAGGTGTTTTTTG---TTTTGCTTGTTTCTGGTGTTGATCTGTGCGCAAGTTCATTGTATTGCAACAGGAA---TTGCT
TCTGGCACGAGTCAAGAATGTACTGTATTCTGCATACAGTATGAAGAACATGTACTGATCTTATGCAGATTAAACTTGGT
GCTTTGAAGATGCTCATTTGAAGAACTAGATGGCATACCGCTCTGTCCTAACTGTTGATTGTTGTTCATTCTTCTATGTC
GGTCTCCTACTCATTTTTTTCTTGCCTGTGGTGCTAGTGCTACCATTCTTACGTCATGTTATTTGCAATGACAGCTCAAG
ATGGAGATGCCTCAAACTAGGGAAACTAGCAGTTGCAATTTACCAAGGAGTTGCTCCTTGAATATGTTCTGCCTCCTCCT
CCATCTCCTTGCCATCACCACCCTGCCTTGCTCTGACAACAACACCACCCAACTGGTCTATGACACAGAAGGCAACGAGC
TAAATAGCAAGTCAAATTACTACATCCTCCCAGCCAAACCTGCGAGCAGTGGCGGCCTCAAAGCCGTCCCGACCGATCTA
CGGTGCCTACATTTTGTGGTCCAGGAGCGCAGCGAG---ACTCTCCTCAGCACACCCCTGCGATTCACTCCGTTGCCAGA
ACATGCTTCTGCCACTGAGCCGATCCGCCTGTCGAGTG------------------------ACATATGGATCGAGTTCC
ACGACTTGAGAAGCTTTTGCTCTGATGTGCTAGATTGGCACCTTACCGGACAGGTGCCGGAGTCGTCATCGGGAGAGCCT
AAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCG-TTTGCGGTGTTCCGGGTTGAGAGGCATGGCATAGATCTCT
CGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACATGG
CTAACTATAAGCGATAAACCTTTTATGGTTGTGTTTAGGAAAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GACTATATAGGTGTTTTTTT---GCTTG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_1300
GAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GAGTTCC
ACGACTTGAGAAGCTTTTGCTCTGATGTGCTATATTGGCACATTACCGGGCAGGTGCCGGAGTCGTCATCAGGAGAGCCT
AAACACGTGGCCGCCGGCAGTGAAGAGGGCCTAAGATCG-TTTGGGGTGTTCCGGGTTGAGAGGCATGGCATAGATCTCT
CGGGATATAAGATAGTTTCATGTGTTGACAAGGGGCCATGCAGAGACCTAGGTTTGCATGTTTATAAGGATAAGACATGG
--GACTGTAAGCGATAAACCTTTTTTGGTTGTGTTTAGGAAAAGGGATAATTAGATTTATGCCCCTAGTTGTGTCCCACT
CGTCTGTTTTACCCCTAATTCCCAAAAGTCACCGGTTCTGTCCAAGTCACTTTGATCCTCTTATGCTTTTGCCCTTTGAC
CGTTTGATCGTCAGTTTGAAAACTTCATAACTAATTAATACAAAATCAAAAAAATGCAAATAAGATACCAAAATGTTCAG
AAAAACATCACCTATATGTCAGTGTCATTTGCATTCATGAAAAAAGTGTTGGAAAGTGCACATCCGAGTTTTAGCTCTTT
TGATACCACCATGAATAGTAAACTCTAAAAAAATTCAAAAAATTTATGGTGGCAAAGAACGACAAGTGTTCTAAGTGCTT
GCCAAGTTTCATTAGGGAACGACATTCGTGGAAGTCGTGGCAAAAAAATAATCTATTTTGGAGTGTTGATTGTTTTTCTT
GCCGCGGCACCCACGAATGTTATTCCCTGATGAAACTTGGCAGGCACTTAATACATTTGCCATTCTTTGCCACCAAATTA
TTTTTGAATTTTTTTGAACTTTTTTAGATTTTACTATTCATGGTGGTAGCATATGAGCTAAAACTCGAATGGGCACTTTC
CAACACTTTTTTCATGAATGCAAATGACACTGACATATAGGTGATGTTTTTCTGAACATTTTGGTATCTTATTTGCATTT
TTCTGATTTAGTATGAATTAGTTATGAAGTTTGCAAACTGACGGTCAAACAGTCAAAGGGCAAAAGCATAAAAGGAGCAA
AGTGATTTGGACAGAACCGGTGACTTTTGGTAATTAGGGGTAAAACGGACAAGTGGGACACAACTAGGGGCATAAATCTA
ATTATCCCTTAGGAAAAGGACTATATAGGTGGA---TTTTTGCTTGCTTCTCGAGGTGATCCGTGTAGGCATGTTCATTG
TATCGCCACATTGGTGTCCATGTTATGTAATGTGTTCCACCACTTTGGAATAACGCGATACTAACTATATCATGTGAAAA
GAGGAGCTAAGAGGGACCATGTTAAAATTGCTCATGATAATAACTAGCAGCCAAAGTTAGTTATTTGAATAAA-TTTCTT
TTAAATGGGTTGATGACCCTCCAGACTGGATCCTTTCTGTCCTGGCAAATGATGTAATCGTTGTTTAAGTTAATAAAGCT
AGCCATTATGGCCACTCCCTAAATAGAAAAATCTAGCATCTAATTTTCCCTGGCGCATGAGGGAATACTTCTGTTTAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS----------S------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--------S---------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------S-----------------------S------------------------------
-------------------------S------------------------------------------------------
-----------------S--------------------------------------------------------------
-S--------S-------------S-S-------------------------------------------------S---
--S--S--S---S--S-S--------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------------------------------------S----------------------
------------------------------------------------------------------S-------------
------S-------------S---------------S---------S---S---------------------S-------
-----------------------------------------S--------------------------------------
----------------S------S-S-----SS------------S-----------S--------------------S-
----------S--S---S-------S---S-S---------------------------------SS------------S
SS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTGTGCACGTACGCAGTTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_3959
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------AGGGCTATGTTGCAGAACCC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
