>input_sequence_74269
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--------------------------------------------------------ATGGGCTCACGGTCACAGCGATGC
GGTTCTTGCTATGTCAAAGCAATCATCAGCAGGCTCAAGCCCAGATGCCTTGGAGGGAAGCCGCAGCGTTGCGAGAGCGG
CGCCAGATGCGTTGGAGGGAAGCCGCAGCGTTGTGAGAGCGGCGCCAGATGCGTTGGAGGGAAGCCGCAGCGTTGTGAGA
GCGGCGCCAGATGCGTTGGAGGGAAGCCGCAGCGCTATGAGAGCAGCATAGTCAAGGCAGAAGTAAGGCACGATACTCTT
CAGGATATTCTGTACTCTCAGCAGAGCTTCGAGGGGGATGAGATTGGGGCACCATCACCTCGGAGGCATTCCCCGAAGGT
TCGTCCGCTTAACCTGGATTGCCCTTACGGGGACAACTCCCCCAATATCCAGGATAGCTTCTCCATCGACAGGGTTACTC
TGAGGAGCCAACGCAGCGTAGCCAGGAGAGTCAGCTTCAGATCTCCTGATCACTCAGACATATTCATCATTCCCGCACGC
AACGATCCTGCTGGTTATTACTCCAGTGATGAGGAATCCACAGAGAGTATAAGTGAAGAAGGCATTGGTGCAAAGAGGCC
TCCTTGTGCCATAACCAGATACTAA-------------------------------------------------------
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>chr5B_1_TraesCS5B01G259300
AATCGGATGTATATAGACATATTTTAGTGTGTTTGTTCACTCATTTCAGTCCGTACGTGGTCCATATTAAAATACCCAAA
ACATCTTATATTTTGAAAGGAATAGCAAATACTATGATACTGCTGAACATAAAACAAAAGGTCCACATGTATT------G
AAATTATATCATAGTACATGCCAAGGAAATTAGTTGTCATCAGGGCATATCAGATTAAGTTACCTGCCAAGTTGCAGTAC
CATCGTCTGGATTTTTTTTTTAATTTATGCATGCAATGCCAAGAACAGAAAAGGGG--------CAAACAACGATGATGT
CAGAGTTGGTACTATGAAGAAGACCGGTTTAATTAACCACATATTCAGGAGGCTTTCCACCTTCCAAGCATTTCACCATC
CAACAATTTTTTAAACATCTAAAGG-AAAAATACCAAGAAGACTAGATAACAACGGCGTTAGGACAGTGAAGAAACCTAT
ACTTTGGACTCCGTTTTTGTATACACCCTGTACAAGTGGCAGCAGTGGATATCCTATGTGTTCACCTGGGAGTTCCAGCT
CAGTCACAAGAACACAGGTCATGACAAGATTGCCTAGCCCACACCCCACCATCCACAATTCTCTAGCCAGGATTCCAAAA
TAGGTCTTCGTATTCTCCGCGGATGCCTATATTGAACTCCAAATGTGACCAGGATTATTGTGATTTACATCACTCGCTGG
ATGCGATGACAACAATAATCGCACCAAGGCGAACTATAAGGTTCATTGTAAAATATAGTTACCATAGCCGATGCTAATCT
GAACTAAGTTCTCTATGTCCCCTTCTTGGTGTTCTTTGCTCCAACCTCCCTGGTTTGTCCTACTTTGGCATGACCAAGGT
GTGACAAAGCCAAGCCCAACAAATACCAAGCAGAAGCACATGCCGTATCTATAAACACATTTGCTAGGGGGGACTGGCAT
GAACTGCTTAAGCCATATGCTACTTCCTTTCACCACCTAAGAGA-GGAGGGAGGGAATGGGCTCACGGTCACAGCGATGC
GGTTCTTGCTATGTCAAAGCAATCATCAGCAGGCTCAAGCCCAGATGCCTTGGAGGGAAGCCGCAGCGTTGCGAGAGCGG
CGCCAGATGCGTTGGAGGGAAGCCGCAGCGTTGTGAGAGCGGCGCCAGATGCGTTGGAGGGAAGCCGCAGCGTTGTGAGA
GCGGCGCCAGATGCGTTGGAGGGAAGCCGCAGCGCTATGAGAGCAGCATAGTCAAGGCAGAAGTAAGGCACGATACTCTT
CAGGATATTCTGTACTCTCAGCAGAGCTTCGAGGGGGATGAGATTGGGGCACCATCACCTCGGAGGCATTCCCCGAAGGT
TCGTCCGCTTAACCTGGATTGCCCTTACGGGGACAACTCCCCCAATATCCAGGATAGCTTCTCCATCGACAGGGTTACTC
TGAGGAGCCAACGCAGCGTAGCCAGGAGAGTCAGCTTCAGATCTCCTGATCACTCAGACATATTCATCATTCCCGCACGC
AACGATCCTGCTGGTTATTACTCCAGTGATGAGGAATCCACAGAGAGTATAAGTGAAGAAGGCATTGGTGCAAAGAGGCC
TCCTTGTGCCATAACCAGATACTAAAAG--GCCTGCTATCTGGTGCAACATCAAAAATCAAAACAGGCAGGCTGGAAGAA
AAGGGGCTCACAACAAACAAGCTCGTTGCTCAGGCTATTTCTTTACAGAAGATACTTATATGGTACTGAAGCAATAGAAG
TATGTGTCTTGATAGTTGGTTTACCCAGGAATATGATATTTGCCACTTTAAC----------------------------
GCCTAATATACTTCATGCAGTAGTATATGTACTTTTGTGTTTCTTGCCCTTCA-CTTTTTCAATGTATTGTATTTTTTCC
AACTTGCTGTTCTGAACTGAAGTGTATCTAAGAAAAAGGTTATGTACCGTACAGAATATCCTACATATGCAAGTACAAAA
GCACTTCTTCCATAAAAATACTCATTAAGCTGTACAAGGTTTATTTTCTAAGACTAGGGGCAAAAGATAAGAGATGCGCA
CATATGACCTCATAAAACAGCCATATCTATAAGATACATTCGTCAACAAAGTGGCAGTTCCTAATGTGAACATACGTTCA
GTGGATCAGGATGAGAAACACCAGGTGTGCTACTTCTGTACACTTAGCTATATTCAGATTTGAAGCCTTCTGTCAGAGCA
ACAACCTTCGAAATTAACTTTGGCTGTAGCCTGGAAACAGCTTTCCGAATATCCTATAAAATGATAGTTTTGGTCAGATA
TGTAGCGTTTTCACA--ACAGTTTGATAGTTCACTGGCTACATACCTCAAGACTATATCGATTCGAGAAATGGGTGAGTA
TAATTGCCTCATTTCTAAACCACTGGGAATGCTCCATTATCTAGGAACCATAAAATGGGTTTATGTTAGTGACTGATAGT
ACATCATATGCAAATATCTCCTCATCATCAGAACTGTCCCAAAGCTCATTAGGATGGCTAGGGGGTGTCCGTATGGGAAC
CATTACCTCAGACAGATGCATGTGGCCATGCTCTCGGGCATGATCAACATCAACTTGGTCATCTAGGAAGGTTGCCTGCC
AAAATTTTGAAAGATGTT
>chr5A_1
AATCGGATGTATAGAGACATATTCTATTGTGTTTGTTCACTCATTTCAGTCCATATGTGGTCCATATTGAAATATCCAAA
ACATCTTATATTTATGAAAT--TAGCAAATACTATGATACTG---AACATAAAACAAATGGTACATATGTATGGACATGG
AAATTATATCATAGTACATGCCAAGGAAATTAATTGTCATCAGGGCATATCAGATTAAGTTACCTGCCAAGTTGCAGTAC
CATCGTCTGGATTTTTTTT---ATTTATGCATGCAATGCCAAGAAGGCAAGAACAGAAAGGGATGAAACAACGATGATGT
CAGAGTTGGTACTATGAAGAAGACTGGTTTAATTAACCACGGATTCAGGAGGCTTTCCACCTTCCAAGCATTTCACTATC
CAACAATTTTA-AAACATCTAAAGG-AAAAATACCAGGGAGACTAGATAACAACGGCGTTAGGACAGTGAAGAAACCTAT
ACTTTGGACTCTGTTTTTGTATACACCCTGTACAAGTGGCAGCACTGGATATCCTATGTGTTCACCTGGGAGTTCCAGCT
CAGTCACAAGAACACAGGTAATGACAAGATTGCCTAGCC-ACACCCCACCATCCACAATTCTCTAGCCAGGATTCCAAAA
TAGGTCTTCGTATACTCCGCGGATGTCTATATTGAACTCCAAATGTGACCAGGATTATTGTGATTTACATCCCTCACTGG
ATGCGATGACAACAATAATCGCACCAAGGCGAACTATAAGGTTAATTGTAAAATATAATTACCATAGCCGATGCTAATCT
GAACTAAGTTCTCTATGTCCCCTTCTTGGTGTTCTTTGCTCCAACCTCCCTGGTTTGTCCTACTTTGGCACGGCCAAGGT
CTGACAAAGCCAAGACCAACAAATACCAAGCACAAGCACATGCCGTATCTATAAACACATTTGCTAGGGGGGACTAGCAT
GAACTGCTTAAGCCATATGCTACTTCCTTTCACCACCTAAGAGAGGGAGGGAGGAAATGGGCTCACGGTCACAGGGATGC
GGTTCTTGCTATGTCAAAGCAATCATCAGCAGACTCAAGCCCAGATGCCTTGGAGGGAAGCCGCAGCGTTG---------
---------------------------------TGAGAGCGGCGCCAGATGCGCTGGAGGGAAGCCGCAGCGCTGCGAGA
GCAGCGCCAGATGCGTTGGAGGGAAGCCGCAGCGCTATGAGAGCAGCATAGTCAAGGCAGAAGTAAGGCACGATACTCTT
CAGGATATTCTGTACTCTCAGCAGAGCTTCGAGGGAGATGAGATTGGGGCACCATCACCTCGGAGGCATTCCCCGAAGGT
TCGTCCGCTTAACCTGGATTGCCCTTATGAGGACAACTCCCCCAATATCCAGGATAGCTTCTCCATCGACAGGGTTACTC
TGAGGAGCCAACGCAGCGTAGCCAGGAGAGTCAGCTTCAGATCTCCTGATCACTCCGACATATTCATCATTCCCGCACGC
AACGATCCTGCTGGTTATTACTCCAGCGATGACGAATCCACAGAGAGTATAAGCGAAGAAGACATTGGTGCGAAGAGACC
TCATTGTGCTATTACCAGATACTAAAAG--GCCTGCTATCTGGTGCAACATCAAAAATCAAAACAGGAAGGCTGGAAGAA
AAGGGGTTCACAACGAACAAGCTCATTGTTCAGGATATTTCTTCACGCCAGATACTTAAATGGTACTGAAGCAATGGAC-
------------TAGATGGTTTACCCAGGAATATGATATTTGCCACTTCATAATCACGAAAAGATATTTGCCACTTCAAG
GCCTAATAAATTTCATGCAGTAGTATATGTACTTTTGTGTTTCTTGCCCTTCACCTTT-TCAACCTATTGTATTTTTTCC
ACCTTGCTATTCTGAACTGAAGTGTATCTAAGAAAGAGGTTATGTACTGTACAGAATATCCTACATATGCAAGTACAAAA
GCACTTCTTCCATAAAAATACTCATTAAGCTGTACAAGGTTTATTTTCTAAGACTAGGGGCAAAAGATAAGAGACGCGCA
CATATGACCTCATAAAACAGCCATATCTATAAGATAAATTCGTCAACAAAGTGGCAGTTCCTAATGTGAACATACGTTCA
GTGGATCAGGATGAGAAACACCAGGTGTTCTACTTCTGTACACTTAGCTATATTCAGATTTGAAGCCTTCTGTCAGAGCA
ACAACCTTCGAAATTAACTTTGGCTGTAGCCTGGAAACAGCTTTCCGAATATCCTATAAAATGATAGTTTTGGTCAGATA
TGTAGCATTTTCACA--GTAGTTTGATAGTTCACTGGTTACATACCTCAAGACTATATCGATTTGAGAAATGAGTGAGTA
TAATTGCCTCATTTCTAAACCATTGGGAATGCTCCATTATCTAGGAACCATAAAA-GGGTTTATGTTAGTGACTGATAGT
ATAATATATACAAATATCTCCTCATCATCAGAATTGTCCCAAAGCTCT-----ATGGCTAGGGGGTGTCAGTATGGGAAC
TATTACCTCAGACAGATGCATGTGGCCATGCTCTCGAGCATGATCAACATCAACTTGGTCATCTAGGAAGGTTGCCTGCC
AAAATTTCAAAAGATGT-
>chr5D_5
----GGATGTATATAAACATATTTTAGTGTGTCTGTTCACTCATTTCAGTCTGTATGTGGTCCATATTGAAATATCCAAA
ACATCTTATATTTATGAAAT--TAGCAAATACTATGATACTG---AACATAAAACAAATGGTCCATATGTATGGACATGG
AAATTATATCATAGTACATGCCAAGGAAATTAATTGTCATCAGGGCATATCAGATTAAGTTACCTGCCAAGTTGCAGTAC
CATCGTCTGGATTTTTTTT---ATTTATGCATGCAATGCCAAGAAGGCAAGAACAGAAAGGGTTCAAACAACGATGATGT
CAGAGTTGGTACTATGAAGAAGACTGGTTTAATTAACCACGGATTCAGGAGGCTTTCCACCTTCCAAGCATTTCACTATC
CAACAATTTTA-AAACTTCCAAAGGCAAAAATACCAGGAAGACTAGATAACAACGGCGTGAGGACAGTGAAGAAACCTAT
ACTTTGGGCTCTGTTTTTGTATACACCCTGTACAAGTGGCAGCAGTGGATATCCTATGTGTTCACCTGGGAGTTCCAGCT
CAGCCACAAGAACACAGGCAATGACAAGATTGCATAGCC-AAACCCCACCATCCACAATTCTCTAGCCAGGATTCCAAAA
TAGGTCTTCGTATTCTCCGCGGATGTCTATATTGAACTCCAAATGTGACCAGGATTATTGTGATTTACATCCCTCACTGG
ATGCGATGACAACAATAATCGCACCAAGGCGAACTATAAGGTTAATTGTAAAATATAATTACCATAGCCGATGCTAGTCT
GAGCTAAGTTCTCTATGTCCCCTTCTTGGTATTCTTTGCTCCAACCTCCCTGGTTTGTCCTACTTTGGCATGACCAAGGT
CTGACAAGGCCAAGCCCAACAAATACCAAGCAGAAGCACATGCCGTATCTATAAACTCATTTGCTAGGGGGGGCTAGCAT
GAACTGCTTAAGCCATATGCTACTTCCTTTCACCACCTAAGAGA-GGAGGGAGGGAATGGGCTCACGGTCACAGGGATGC
GGTTCTTGCTATGTCAAAGCAATTATCAGCAGACTCAAGCCCAGATGCCTTGGAGGGAAGCCGCACCGTTG---------
---------------------------------CGAGAGCGGCGTCAGATGCGTTGAAGGGAAGCCGCAGCGTTGCGAGA
GCCGTGCCAGATGCGTTGGAGGGAAGCCGCAGCGCTATGAGAGCAGCATAGTCAAGGCAGAAGTAAGGCACGATACTCTT
CAGGATATTCTGTACTCTCAGCAGAGCTTCGAGGGAGATGAGATTGGGGCACCATCACCTCGGAGGCATTCCCCGAAGGT
TCGTCCGCTTAACCTGGATTGCCCTTATGGGGACAACTCCCCCAGTATCCAGGATAGCTTCTCCATCGACAGGGTTACTC
TGAGGAGCCAACGCAGCGTAGCCAGGAGAGTCAGCTTCAGGTCTCCTGATCACTCCGACATATTCATCATTCCCGCACGC
AACGATCCTGCTGGTTATTACTCCAGCGATGACGAATCCACAGAGAGTATAAGCGAAGAAGGCATTGGTGCAAAGAGACC
TCGTGGCGCCATAACCAGATACTAAAAGGCGCCTGCTATCTGGTACAACATCAAAAACCAAAACAGGAAGGCTGGAAGAA
AAGGGGTTCACAACCAACAAGCTCATTGCTCAGGATATTTCTTCACAGAAGATACTTAAATGGTACTGAAGCAATAGAC-
------------TAGATGGCTTACCCAGGAATATGATATTTGCCACTTTATACTCTCGAAAAGATATTTGCCACTTTAAG
GCCTAATATATTTCATGCAGTAGTATATGTACTTTTGTGTTTCTTGCCCTTCA-CTTT-TCAACCTATTGTATTTTGTCC
ACCTTGCTATTCTGAACTGGAGTGTATCTAAGAAAGAGGTTATGTACCGTACAGAATATCCTACATATGCAAGTACAAAA
GCACTTCTTCCATAAAAATACTCATTAAGCTGTACAAGGTTTATTTTCTAAGACTAGGGGCAAAAGATAAGAGACGTGCA
CATATGACCTCATAAAACAGCCATATCTATAAGATACATTCATCAACAAAGTGGCAGTTCCTAATGTGAACATACGTTCA
GTGGATCAGGATGAGAAACACCAGGTGTTCTACTTCTGTACAGTTAGCTATATTCAGATTTGAAGCCTTCTGTCAGAGCA
ACAACCTTCGAAATTAACTTTGGCTGTAGCCTGGAAACAGCTTTCCGAATATCCTATAAAATGATAGTTTTGGTCAGATA
TGTAGCGTTCTCACACAACAGTTTGATAGTTCACTAGCTACATACCTCAAGACTATATCGATTTGAGAAATGGGTGAGTA
TAATTGCCTCATTTCTAAACCATTGGGAATGCTCCATTATCTAGGAACCATAAAATGGGTTTATGTTAGTGACTGATAGT
ACAGCATATGCAAATATCTACTCATCATCAGAACTGTCCCAAAGCTCATTAGGATGGCTAA-GGGTGTTAGTCTGGGAAC
CATTACCTCAGACAGATGCATGTGGCCATGTTCTCGAGCATGATCAACATCGACTTGGTCATCTAGGAAGGTTGCCTGCC
AAAATTTTGAAAGATGTT
>SNPs
-------------------------------------------------------S------------S-----S-----
-------------SSS--SSSS--------------------SSS-------------S------S------S-------
--------------------------------S-----------------------------------------------
-------------------SSS-----------------------SSS--S-SSS-------------------------
------------------------S---------------SS----------------------------------S---
----------SS------------------------S-------------------------------------------
-----------S--------------------------------------------------------------------
-------------------S-------------------S----------------------------------------
-------------------------S---------------------------------------------S---S----
-------------------------------------------S-------------S----------------------
--------------------------------------------------------------------------------
S--------------------------------------------------------------------------S----
--------------------------------------------------------------------------S-----
--------------------------------S--------------------------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------S----
--S-----------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------S----------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------S-----S--------------------S-----------------------S--
--S----------------------------------------------------------------S------------
------S-------S---------S---------S--------S--------------S-------------------SS
SSSSSSSSSSSS---S----------------------------------SS----------------------------
----------S-----------------------------------------------S----SS---------------
-S------S--------------------------S--------------------------------------------
--------------------------------------------------------------------------S-----
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----------------------------S---------------------------------------------------
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---------------------------------------------------------------S----------------
----------------------S---------------------------------------------------------
---S-----------------------------------------------------------------S----------
------------------------------------S-------------------------------------------
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>forward_666
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------TTCGTATTCTCCGCGGATGC------------------------------------------------------
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>reverse_1668
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-------------------------------------------------------------------CAGGCTGGAAGAA
AAGGGGC-------------------------------------------------------------------------
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