>input_sequence_74264
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----------------------------------------------------------------------------ATGT
CCGCCGACGGCCCCGGCGCGGTCCGCCGCGCGCTGGACAGGGCCGGCGCGAGCCTCCGCACCGGCCGCCGCGCGCTCGCC
CGCTTCGCGCCCCGCCCCTCGGCCTTCGCCCCGGCGCCCGACGCCGAGGCCGCGGCGGTCCGCGCCGTGCGCAACCTCCG
CACCTTCCGCGTCCACTACGCCGTGATCCAGTGGGCGCTGCTGCTCGCCTCCCTCGCGCCCCGCCACCGCGCCTCCATGC
TCTTCCTCATGGCCGCCTCCAAGGGCCTGCTCCTCTACGGGGGCCTCCTCCGGGCCTTCCCCAACTCCGCGCTCCTCCGC
CGCCTCCTCGACCGCCGCCTCGTCGCCGCCGTCTTCGTGGTCCTCGTCGTCGCCGACCTCGCGGCGGCTGATGCCATACC
CAACCTCCTCTTCGCGCTCGCCGCCGGGGCCCCCGTCGTCGTGCTCCACGCCGCGTTCCGCGTCCGCGACGACCTCGAGC
CCGT------CGCCTCCGCCGACAGCGCCGGAGGGGAGGAGG---------CCACGGGGGTGGTGGTGGAGAAGAAGGAG
GACGGCGACATGGAGACGGGGCCGACGCGCCGCTCCGCCACGGCCGCCACCAAGTCCTAG--------------------
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>chr5A_1_TraesCS5A01G543400
ACGGGCCCTGTCGTGTCGGCCCGCATGCCCAGCCTCTAGGCCCAGGCACGGCCCATGGCGTGCCGCGTGCCGTGCCTGAG
CCGTGCCGTTCCTGCGTGCTACCGGGCCGGCCCAGTTAGCACGGCCCGTTTGGCCAGCTATAGTCGAGCCTCCCCCAATA
TGCTATCTTTGTTTTCGTGCATTCACCTCTTAAGTTAGGAATTCTCAAGGTTTTCATCCATATTGTAAAAGGACATACAT
TTGTCTCGATTTGTGGTATACCTTGAGATTTTCAAAAAAAATAAAAATTACACCAACTCGTGTATCATGGTGATGGTGGC
ACAAGTGTTTGAACAATTGATAATGTACTCCCTCAATCTCAAAATTCTTGTCTTAGATTTGTCTAAATACGGATGTATCA
AGTCACGTTTTAGTACTAGGTACATCCGTATCTAGACAATTCTAAGACAAGAATTTTAGGATGGAGGGAGTATAATAAAC
AATTAACTTTTATAGCAAGCACACGAGCATTTAGCTAGCGAAACTACTTCATAGACGACAAATGCTGGGACGATACATGC
ACGATGCCTAATCCAACAGCTTTGTGCACTTTGGTTTGATGCATGAATGGTAGGATATGCAGTGTCGTCTATGCATCGTG
CGTGAAATGTCGTCCGTGTAGCAACGCTCTTTAGCTAGTACTACCTCTGTATCTGCCAAAACGCCTGATCTTTTGATACA
AAGGGAGTATTAAATACTAAATTAAATGCCTGTGAGGGCATTTGACTCGAATTTTTCAAAGTTGGGCTGGAATTTCTTGT
GCTTAAAAGAACAGAATTGGCAGCACATTTTGCATTTTTGTTGAGGTTGGGA--GGGTTGGCCTTGGCCTAGATCCAAGG
GC---------------------AAAGCGGACCACACCCAGACCCAGACCGAAGACAAGGTGAGAGAGAAGCAAACCACA
CGCCAAAAGGAGGGAGAGGGGCAACCGCGGATCTCGCCCGCGCGCCCGCCGGCC-------------CCCTCCGCCATGT
CCGCCGACGGCCCCGGCGCGGTCCGCCGCGCGCTGGACAGGGCCGGCGCGAGCCTCCGCACCGGCCGCCGCGCGCTCGCC
CGCTTCGCGCCCCGCCCCTCGGCCTTCGCCCCGGCGCCCGACGCCGAGGCCGCGGCGGTCCGCGCCGTGCGCAACCTCCG
CACCTTCCGCGTCCACTACGCCGTGATCCAGTGGGCGCTGCTGCTCGCCTCCCTCGCGCCCCGCCACCGCGCCTCCATGC
TCTTCCTCATGGCCGCCTCCAAGGGCCTGCTCCTCTACGGGGGCCTCCTCCGGGCCTTCCCCAACTCCGCGCTCCTCCGC
CGCCTCCTCGACCGCCGCCTCGTCGCCGCCGTCTTCGTGGTCCTCGTCGTCGCCGACCTCGCGGCGGCTGATGCCATACC
CAACCTCCTCTTCGCGCTCGCCGCCGGGGCCCCCGTCGTCGTGCTCCACGCCGCGTTCCGCGTCCGCGACGACCTCGAGC
CCGT------CGCCTCCGCCGACAGCGCCGGAGGGGAGGAGG---------CCACGGGGGTGGTGGTGGAGAAGAAGGAG
GACGGCGACATGGAGACGGGGCCGACGCGCCGCTCCGCCACGGCCGCCACCAAGTCCTAGGCAA-CAAGATCTCGCCGCC
CATATACAAGTACACCTT-------AGACAGACAAAGTGCTGGTATTTCTTGATCAAATTCCATTCTTTTTGGAGAAATT
TGGAG-CTCACTACTAC---------CTAGGATGCAGCAGAATGAATCGAAATTCGTTGTCTCTTCTTGTCTTAATTATG
GCTTAGCATTAGGATCTT-CCCCTGTTCCTTGTGTATACACAAATTTACTGCTACTGCTGCTACTACTACTACTACTACA
TTGTTACTCCATAGAACAAAACTAGCAACTAACAAGAGAATCAACTGGAGCAGCTCATCTGACCATTCCTTCC--TATAT
GTAATTCTGATTGTGATGACAGACAGAGATAACACCGTGGCATCGCATCGCATCGCATTGCATTTGTTTCTAT-------
--GAGCTAGCACTTAGCCCCTCTGATAATGTTATTCT------------------TTTTCTCTCGTCACTCCATTTGTTG
TTACCAGTAGTATTGCTTTGTGAAAGAGAGGAGTATAGATTCCATTGAACTCCTCTATCCATCCATCCATCCATCCATCC
A-------------------------------TCTGCATTGCTGTGATCTCAGAGTGGAGGCCCCAGCCAGACTTGTTGT
TCTGGGACTTATGGATGGAATGAAATGGGATGTTTGGATTGGAACTTTGGAGATGTGCATAAAATTAAAATGTAGGGCAT
TTCCATTTGGAACAGAACCAAGTCAAGAACAAGTTGGGGATTCTTCAAAAG--TAAA-----------AAGAAAAAAGGA
CACAAGCTGGGAAGGGAGGGAGGTTCAAGAGTCAAGAAGACAAGGAACCTAGCCTAACATACATGTTGGAGAAGAAACAG
AGTAGTAAAACTAGTA-----------GTATTACCAATAAAGCTGAAATGGAGGAGAATTAATTAGGTGGACGGCCACCG
CAACCCTAGAGGCAAAGGCAAGAAAAGAAAGGGTTGAGACCTTCACCAGGTGTTGCCTCTGCTATGCTATGCTGCCGGTG
GTACCTGAGGCGGTCCAGCTGAGCTAAAATACTAACTAATGGC
>chr4B_740
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-------------------AATTTAATGCCTGTGAGGGCATTTGATCTCAATTTTGCAAAGTTGGGTTGAAATTCCTTGT
GTTGAAAAGAAGAGAATTGGCACCACATTTTGCATTTTTGTTGAGGTTGGGAGAGGGTTGGCCTTGGCCTAGACCCAAGT
GTGTGTGTGTGTGGGCAAAGCCAAAAGCAGACCAGACCAAGACCAACGCCC-AGAGAAGGTGAGAGAGGGAGA-------
------------------GGGGGAACGCGGATCTCGCCCGCCCGCGCGCCCGCCGGCCGGCCGTCCCCCCTCCGCCATGT
CCGCCGACGGCCCCGGCGCGGTCCGCCGGGCCCTTGACAGGGCCGGCGCGAGCCTCCGCGGCGGCCGCCGCGCGCTGGCC
CGCTTCGCGCCCCGCCCGTCGGCCTTCTCCGCGGCCCCCGACGCCGAGGCGGCGGCGGTCCGCGCCGTGCGCAACCTCCG
CACCTTCCGCGCCCACTACGCCGTGATCCAGTGGGCGCTGCTGCTGGCCTCCCTCGCGCCCCGCCACCGCGCCTCCATGC
TCTTCCTCATGGCCGCCTCCAAGGGCCTGCTCCTCTACGGGGCCCTCCTCCGCGCCTTCCCCGCCTCCGCGCTCCTCCGC
CGCCTCCTCGACCGCCGCCTCGTCGCCGCCGTCTTCGTCGCCCTCGTCCTCGCCGACCTCGCCGCCGCCGGGGCGCTGCC
CAACCTCCTCTTCGCGCTCGCCGCAGGCGCCCCCGTCGTCCTCCTCCACGCCGCGTTCCGCGTCCGCGACGACCTCGAGC
CCGGGGCCGCCGCCTCCGCCGACAACGGCGCCGGGGGGGAGGAGGAGGAGGCCACGGGTGTCGTGGTGGAGAAGAAGGAG
GACGGCGACATGGAGACCGGGCCGACGCGCCGCTCCGCCACGGCCGCCGCCAAGTCCTAGGCTGCCAAGATCTCGCCGCC
CATATACCACAACTACACCTTAGAAAGACAGACAGAGTGCTGGTATTCCTTGATCAAATTCCATTCTTTTTGGAGAGATT
TGGAGGCTCACTACTACTACTACCTACTAGGATGCATCAGAATGAATCAGAATTCGTTGTCTCTTA---TCTTAATCATG
GC-TAGCATTAGGATTTCCCCCCTGTTCCTTGTGTATACACAGAAGATT---TACTCCTGCTACTCCTACTGCAACATTG
TTGTTACTCCGTAGGC--AAACTAGCAACTAACAAGAGAATCAACTGGGTCTGTTATGATCCTTCTTTCCCACAGTATAT
GTAATCCTGATTGTCGCCGCAACCAGAGATGCCT----------GCATTGCATTGCGCTGCATTCGTTTGTAAGGCGGAT
CCGAGCTAGCGCTTAGCCCCTCTGATAATGATTATTATCAGTACCAGTACCATTCTTTTCCC---TCACTCCATTTGCTG
TTACCAGCAGTACTGTTTTGTGAAATAGAGGAGTGCAGATTCCAGTCTACTCC-------ATCCATGTATAAGCTAATAT
AAGACGTTTTAGATCATACAGAGTATCTGCATTCCGCATTGCTGTGGTGGAAGAGTTTTTGCTGGCCCCTGTGG------
-------------------ATGAAATGGGGTGTTTGGA-----ACTTTGGAAACGGACAGCGA---AAAATGTAGGGCAT
GG---------ACAGAATCAAGTCAAGAACAAGTTGGGGATGTTTCACCATTATAAG-----------AAGGAAAGTAGA
CACAAGTTGGGGAGGGAGGGAGGTT-AAGAGTCAAGAAGACAAGGAACCCAGCCTAACAT----GTTGGAGAAGAAACAT
AGTGAA--------------------------ACTGATAAAGCTGAAATGGAGGAGAATTAATTCGCTGGACGGCCACCG
CAACCCTAGAGGCGAAG------AAAGAAAGGGTTGAGACCTTCACCAGGTGTTGCCTCTGC------------------
-------------------------------------------
>chr7B_2030
TT------------------------------------------------------------------------------
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---------------------------------------------------ATTCTTTTCTCTCGCCACTCCATTTGTTG
TTACCAGTAGTATTACTTTG---AGTTGACGAGCATAGATTCCATTGAACTGCTCTATCCATCCATGTATTGGAC-----
---------------------------------CTGCATTGCTGTGATC-CAGAGTGGAGGCCCCAGCCAGACTTGTTGT
TCTGGGACTTATGGATGGAATGAATTGGGATGTTTGGGTTGGAACTTTGGAGATGGGCATAAAATT------TAGTGCAT
TTCCATTTGGAACAGAACCAAGTCAAGAACAAGTTGGGGGTTCTTCAAAAG--AAAGAAGAAAAAGAAAAAGAAAAGGGA
CACAAGCTAGGGAGGGAGGGAGGTTCAAGAGTCAAGAAGACAAGGAACCTAGCCTAACAT----GTTGGAGAAGAAACAT
AGTAGTAAAGCTAGTATACTACTACTGGTAGTACTAATAAAGCTGAAATGGAGGAGAGTTAATTAGCTAGACGACCACCG
CAACCCCAGAGGCAAAGGC-----AAGAGAGGGTTGATACCTTCACCAGGTGTTGCCTCTGC------------------
-------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----S---------------------SSSS------S----------S--S----S-----
-S-S-------S----------S--------------------------------------------------S-----S
-S--------------------------S-----S---S-----S-SS--SS---S------------SSSS-SSSSSSS
SSSSSSSSSSSSSSSSSS---SS-S----------------S---S----S-----------------------------
----------------------------S--S--S------------------------SS---------------S---
-----------------S---------S--S----S--------------S-----------------------------
-----------S---------------------------------S----------------------------------
------------------------------------------S---------S---------SS----------------
--------------------------------------S-S-------S-------------S--S--S-SS--SS-S--
------------------------S--S------------S-S-------------------------------------
---S--------------------S--S--SS----S---------------------S--S------------------
-----------------S------------------------------S-------------SS----------------
-------S-SS--SS-SS----------------S------------S----------------------------S---
------------------------------------S-----------SS---------------SSSS-------S---
--S------------S-S------------------------S-SSSSSSSS----S--------S-----S-S--SSSS
----------S---SSSS------------------------------SS-S-S-SSSS-SSSSS--S-SSS--------
-----S--------SSSSS--SS-------SS-SSSSSSSSSSS----S----S--SS------S----S--S-------
----------S-------------------S-SS-SS-------------------------------------------
-------------------------S----------------------------------------SS--SSSS-S--SS
-------------------------------------------------S------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------S--------------S----S---
-----------S------------------------------------------------SSSS---------------S
---------S--------------------S---S-------------------------------S-------------
-------------------SSSS---------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_672
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------------TCCGTGTAGCAACGCTCTTT------------------------------------------------
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>reverse_1579
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----------------------------------------------------------GGTGGTGGTGGAGAAGAAGG--
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>forward_711
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---------------------------------------------------TCTGCCAAAACGCCTGATCT---------
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>reverse_1582
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-------------------------------------------------------------GGTGGTGGAGAAGAAGGAG
G-------------------------------------------------------------------------------
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>forward_969
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---------------------------------------------------------------------AGCAAACCACA
CGCCAAAAG-----------------------------------------------------------------------
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>reverse_2730
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---------GCGGTCCAGCTGAGCTAAAA--------------
