>input_sequence_74253
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-----------------------------------------------------------------ATGCCGATGTGGAGG
A--TGCCGCCGCTGCGGGCGAGCAGCGGCTGGTGGCTATCGGTGGTGGTGATCCTGGCGGAGCTGGCTAGAGATCAGCTG
CTGCTATGGAACGCGGCGCCGGCCTCTGCACCAATAAGCTCGACTGGTTCCATGCCATGGAGGTATTCTGCTCTGTCTCC
AGTTTCCAAGGTCATCTTGGTGGTGGAATCGAAGCAGAGAGGAGATGGTGATCCTAATTGGGTTTGTGCTTATCTCTGGT
GGCTGATTGGGACTTGCTACGGCGCCAGCCAAGGTGCTCGGCTGCCGGCTGGCCCCATCTCGCCGCCGCACGTGGTGGCC
GAAGGGCGGCCTTCTTGTTTCTTCCTCCCTGCCAAGGA-GCCTATAGGGAGGCAGC--------TCATCTTCTACATGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTCTGCCGTCCCAAGTGGTATTGTCCTCGGCGACGACGTGGCTGCACCC
---GTGAAGATGTCAGGGACCCAATTGCGTTGCTCATCTGGTTGTTGGGGTCCTCTTTGTAAAATGCAGGGACCAGTTTG
CTATTTAGGATTAGTTCTGGGTCCTTTTGCATTCTGCTGTGTACCACTG---TTTT---AA-------------------
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-------------------------------
>chr3D_1_TraesCS3D01G195900
ATCCTTGGACGCACGTGAAATAACATTTTCTAATATGCCACTCTTTACAGTGGTATATATATATATA-------------
-------------------------------------------AGAATCCTTAATGTTTTTCTTGTTATTGTTGCTTGCA
CTTTTTTGAGCTAAAGTTTGCGTCCTGATGCATTGGTAGAAAAGAAGGTTTAGTACAAGCCCAAGAAGGGCAACACCGGA
GAATACAATGCCACACCCCTAAGGGCTAGGATCGAGAGGCAGCAGATCGGAAGAATCACGATG-----------------
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------------------------------------------------------------------TTACTCATATTAGA
ATTTTGGCAACAAATTGGATAAGATGCCTAAGAATACTCCACATGGAAGGGAAACCTTGAGATGGAACTACATAGTCAAA
ATTTGCTTTCTAAAGTATTTGATAAGTTCCGTTTGAATTAAGGTAGGGGCAACAATTAGGACATTTGGATCATAACTCAA
CCTGAAATTTTCCTTGATAAGCTTGTGCAGAATTAAGCTTTCTTATTGGAGTCTGGGGCTAATAATGCATTTTCTGATTA
ATTGGCTGTAGGAAGGGATGGGTTGACCCACAACATGTTGGAGATGATACATTGCCATTGGAGGCGCCAGGAGGTCTGCA
AAGTGAGATGTCGAGGAGTACCGACTGTTGATATGAACAACCTTTGTTATCACCTTGAGGTATACTTTTTGTACAACTTT
CCCATTCAGTTGTGATCATGTGCTTGTGTTGATGTCATTCTCTGAGGATCTATATAAATTGAACTATAATTTGTTGCGAC
ATCTAAGAGAATCCAGCTGCCATTAGATGAACCTAGTTCAGTCCAGGAGTATCCAGAG----------------------
----TTAGTTCAGTCCGGGATATCCAAACGGGCGC-----TTCGAGATAGGCCGTTGAGAGTCGAGAGAGAGCCGCAGCT
TCCGGCCCGATCCCCTATCTTCTCCGA---------CGGCTACGGCGGCCGGAGCAGATAAGGGAGAGGTGCTCGGTGTA
GTTATGTGAATAAAGTATCTAGTTTTAGGTTGT------GTTGTGCCCATGTGGTGTCTGGCGTTATGCCGATGTGGAGG
A--TGCCGCCGCTGCGGGCGAGCAGCGGCTGGTGGCTATCGGTGGTGGTGATCCTGGCGGAGCTGGCTAGAGATCAGCTG
CTGCTATGGAACGCGGCGCCGGCCTCTGCACCAATAAGCTCGACTGGTTCCATGCCATGGAGGTATTCTGCTCTGTCTCC
AGTTTCCAAGGTCATCTTGGTGGTGGAATCGAAGCAGAGAGGAGATGGTGATCCTAATTGGGTTTGTGCTTATCTCTGGT
GGCTGATTGGGACTTGCTACGGCGCCAGCCAAGGTGCTCGGCTGCCGGCTGGCCCCATCTCGCCGCCGCACGTGGTGGCC
GAAGGGCGGCCTTCTTGTTTCTTCCTCCCTGCCAAGGA-GCCTATAGGGAGGCAGC--------TCATCTTCTACATGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTCTGCCGTCCCAAGTGGTATTGTCCTCGGCGACGACGTGGCTGCACCC
---GTGAAGATGTCAGGGACCCAATTGCGTTGCTCATCTGGTTGTTGGGGTCCTCTTTGTAAAATGCAGGGACCAGTTTG
CTATTTAGGATTAGTTCTGGGTCCTTTTGCATTCTGCTGTGTACCACTG---TTTT---AATATC-AATGCAGTTTCGGG
GTCCTTCTGGACCCCTCTCTCGTTCAAAAAAAAAGTTAGCTCAGTCCAGGAGTATCCAGAGTGAGTAGGAGTCCTAGTAG
AAGTTTGAGTCTAAAGTTGGTTGTGTTCAAGTCAGGTTGGGATAGCTCTGTAAAGGAGCAGTTTTGTAGTAGTCCCAGCT
GTACTGTTCAGTGAACAGTAACCAACCTAAAAAGTCTATATAAGGATGTACCCCCCTTGTAAGCAAGGAAGGCAATGAAA
TATGTAGTTCCTACCTATGCTTCTGTTCTACCCCTGCAATTCTCCAATCTTTCCTCATTATCCTTCTCCTGTACCACGAC
CCCTATACAGCAACGACCCTCGCGCACAGCTAGTATCCCACCAAGTAACTAACG------ACGTCGGCCACAACAAATTT
ATTCTGCACACAAGTTACAAGGGTAGGGCTGGCGCAGTGGT---AGTCTCTCCACTTGTGGCCTGGAGGTCCTGTTTTTG
AACCAGCCTCTTTGCAGAATTATTATTCAAGGGTAAGGCTGTCTAGAAATTCTCTTCCCTAGACCCCACCTTGTGTAGGA
GCTTTCAGCACTGGGTACGCCCTTTAAGTTACGAGTTCGTGCTCCAAGGTCCAGGGAAACTTGTTTACTTGTTTGGTTTT
AGACATTTGTGTTTCTTAGCAGCTACTCCCTCCGTCTGGGTTTATTAGGCCTCTCAGCATCACAAGCATGTCCCCCTTTT
ATAAGGCCCCGCTTTGGAAAGGTGCATGCATGCAACCATTTCATTGGTTGCATTGAAAACCATTGTTGTTGGTGCCATGG
CTGAAAAATTAATACACTTCATGCGTGCTTTTTCATTGGCTGCATGCATGTGAGAGAGTGCATTGGGAGTGGAATGGAAT
AATTAATGTGAGCAAGTTACTATGTGTCTTGGTCTAAGAGAAGTTGTCTTCAGGCCTAATAAACCCGGACGGAGGGAGTA
GTAGTAGTGTAATAAGAGCTCAATTGTCATA
>chr3A_1
ATCCTTGGACGCACGTGAAATAACATTTTCTAATATGCCACTCTTTACAGTGGTATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATAAGAATCCTCAATGTTTTTCTTGTTATTGTTGCTTGCA
CTTTTTTGAGCTAAAGTTTGCGTCCTGATGCATTGGTAGAAAAGAAGG-TTAGTACAAGCCCAAGAAGGGCAACACCGGA
GAATACAATGCCACACCCCTAAGGGCTAGGATCAAGAGGCAGCTGATCGGAAGAATCACGATG-----------------
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------------------------------------------------------------------TTACTCAGATTAGA
ATTTTGGCAACAAATTGGATAAGATGCCTAAGAATACTCCACATGGAAGGCAAACCTTGAGATGGAGCTACATAGTCAAA
ATTTGCTTTCTAAAGTATTTGATAAGTTCCGTTTGAATTAAGGTAGGGGCAAC-ATTAGGACATTTGGATCATAACTCAA
CTTGAAATTTTCCTTGATAAGCTTGTGCAGAATTAAGCTTTCTTATTGGAGTCTGGAGCTAATAATGCATTTTCTGATTA
ATTGACTGTAGGAAGGGATGGGTTGACCCACAACATGTTGGAGATGATACATTGCCATTGGAGGCGCCAGGAGGTCTGCA
AAGTGAGATGTCGAGGAGTACCGACTGTTGATATGGACAACCTTTGTTATCACCTTGAGGTATACTTTTTGTACAACTTT
CCCATTCAGTTGTGATTATGTGCTTGTGTTGATGTCATTCTCTAAGGATCTATATAAATTGAACTATAATTTGTTGCGAC
ATCTAAGAGAATCCAGCTGCCATTAGATGAACCTAGTTCAGTCCAGGAGTATCCAGAGTTAGTTCAGTCCAGGAGTATCC
AGAGTTAGTTCAGTCCGGGATATCCAAACGGGCGCTTCTTTTCGAGATAGGCCGTTGAGAGTCGAGAGAGAGCCGCAGCT
TCCGGCCCGATCTCCTATCTTCTCCGA---------CGGCTACGGCGGCCGGAGCAGATAAGGGAGAGGTGCTCGGTGTA
GTTATGTGAATAAAGTATCTAGTTTTAGGTTGT------GTTGTGCCCATGTGGTGTCTGGCGTTATGCCGATGTGGAGG
A--TGCCGCCGCTGCGGG-GAGCAGCGGCTGGTGGCTATCGGTGGTGGTGATCCTGGCGGTGCTGGCTAGAGATCAACTG
CTGCTATGGAACGCGACGCTGGCCTCTGCACCAATAAGCTCGACTGGTTCCATGCTATGGAGGTACTCTGCTCTGTCTCC
AGTTTCCAAGGTCATCTTGGTGGTGGAATCGAAGCAGAGAGGAGATGGTGATCCTAATCGGGTTTGTGCTTATCTCTGGT
GGCTGATTGGGACTGGCTACGGCGCCAGCCAAGGTGCTCGGCTGCCGGCTGGCCCCATCTCGCCGCCGCACGTGGTGGCC
GAAGGGCGGCCCTCTTGTTTCTTCCTCCCTGCCAAGGA-GCCTATAGGGAGGCAGC--------TCATCTTCTCCATGGA
-------GTCTATGTCGTGGTGCCATGGAAGCTCCGCCGTCCCAAGTGGTATTGTCCCCGGCGACGACGTGGCTGCACCC
---GTGAAGATGTCAGGGACCCAATTGCGTTGCTCATCTGGTTGTTGGGGTCCTCTTTTTAAAATGCAGGGACCAGTTTG
CTATTTAGGATTAGTTCTGGGTCCTTTTGCATTCTGCTGTGTACCACTG---TTTT---AATATCAAATGCAGTTTCGGG
GTCCTTCTGGACCCCTCTCTAGTTCAAAAAAAAAGTTAGTTCAGTCCAGGAGTATCCAGAGTGAGTAGGAGTCCTAGTAG
AAGTTTGAGTCTAAAGTTGGTTGTGTTCAAGTCAGGTTGGGATAGCTCTATAAAGGAGCAGTTTTGTAATAGTCCCAGCT
GTACTGTTCAGTGAACAGTAACCAACCTAAAAAGTCTATATAAGGATGTACCCCCCTTGTAAGCAAGGCATGCAATAAAA
TATGCAGTTCCTACCTATGCTTCTGTTCTACCCCTGCAATTCTCCAATCTTTCCTCATTACCCTTCTCCTGTACCACGAC
CCCTATACAGCAATGACCCTCGTGCACAGCTAGTATCCCACCAAGTAACTTCCGTAGCCAACGTCGGCCGCAACAAATTT
ATTCTGCACACAGGTTACAAAGGTAGGGCTGGCGCAGTGGT-AGAGTCTCTCCACTTGTGGCCTGGAGGTCCTGTGTTTG
AACCAGCCTCTTTGCAGAATTATTATTCAAGGGTAAGGCTGTCTAGAAATTCTCTTCCCTAGACCCCACCTTGTGTGGGA
GCTTTCAGCACTGGGTACGCCCTTTAAGTTACGAGTTCGCGCTCCAAGGTCCAGGGAAACTTGTTTACTTGTTTGGTTTT
AGACATTCGTGTTTCTTAGCAGCTA-------------------------------------------------------
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-------------------------------
>chr3B_1
ATCCTTGGACGCACGTGAAATAACATTTTCTAATATGCCA--CTTTACAGTGGTATATATATATATATATA---------
-------------------------------------------AGAATCCTTAATGTTTTTCTTGTTATTGTTGCTTGCA
CTTTTTTGAGCTAAAGTTTGCGTCCTGATGCATTGGTACAAAAGAAGGTTTAGTACAAGCCCAAGAAGGGCAACACCGGA
GAATACAATGCCACACCCCTAAGGGCTAGGATCGAGAGGCTGCACATCGGAAGAATCACGATGTTACTGTTATGGCGCTG
CTAGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGCCTTTTTTGCCCACGGCCGGGCAAGAGGGAAGGGATTTCCTTCTTAA
TTCTTGCTTGATTAGATCGATACATCTCCTCTCTTTATATAGAGAGGTTTACTTGACTCTCAAGCAAGGCTTACTTGACC
CCTAAGCAAACGACCCTTATCTCTAATTAACCCTAAGACTAATGGGCCCATTAGGCCCATTACATACTCTAACACTACAC
CCCACCTGGACATGCAGCTTGTCCTCGAGCTGCAGCCTAACCAACTTATAACCATGACTCGACGCAACACAAACCTAACA
CCTAAAAACAAGCCTTTTACATCTCGGCTTGTTTTATTATTTTCAACCTGAAATAGACTAGGACGCTTTATTTTGGACGT
GCACGTGTACAGCCACCTGGATCCCATGGACACCACCTGGACAAAAGGAGTGCATGTTTATGGCTGTTGGTCTGCACCGC
ACAGGGAAGAGTGGAGGGCTTGCGATGGAGAATGACGAGGAGGGGTGCGCCCCCCCCACCGCCGATGTCGCGGACTTTGA
GGTCACTGCCCGCGGGGAAAACAACATGTCCGCCGCCCGTGGGGGAAACCGCATGCCCAAGATCCCCGACGCAGCGGACG
AGATTGAGGTCCTTTGCGCAGCGAAGGGCAACTTGGAGGAGCGGCAACTGTAGACCACGCATCTCCCACACACGCCGACG
CGCTAGGAGGCCGCGCGCAGCAGCCTACAGCCGCATCGCCGCCGACACGTGGCGGGTAGCGATCCAAGACGGAAGCGGTG
ACGGCGACGGCGGGGACTTGATCTGCTGGATGTGGACGCCCTGGGATGGCGGCGGCGCTGATGGGAACGAGGTCGTCGCA
GTCCCGTTGTAGGGCATCCCATACTGGGCGGCGGAGCTGACCGGCGGTGGCTGCTGCAGCTGCAGCGGCTGCTGTGGGGT
CGCGCCGGGCAGCGGCAGCGGCAGCTGCGGCGGAGCGCTGGGTGCGGCGGAGGCCGACAAGAGCGGCGGCTGTCACTGTA
GCCAGGGCTGGGTGGTGGTGGCGATGTATGGCAGCTGCAGCGGCCCGGCGAGCGCAGCGAAGGCCGCCTGGTGCGGTGGC
TGCCACGGCAGCCACGGCGGCGCGGGGGCGGCGATGGGCGGCGCAGCCGGGTGCGGCCTGTAGGACCCGGCCAAGAACAT
GTGGATCTCCTGGACCGTCTGGGTTAGGTCCCGCAGCACCCCGGACACCTCCTCCCAGGTGAGGACGGCGGGGGCGGGCG
CGATGGAGGATCCCGGCGCGGGCAGGAGCGAGGCGACGGTCGTGGTGGTCGCCGGGGGTGACATGGTGACCGACAGCGGA
AGAGACGGACTTGGTGGCGGTGAAGACATGATCGAACCGAAGCTAACTGATACCAAATTGTTATGGCGCTGCTAGAAGGA
GGGCGCGAGAGGGCCGGCCGGGGGCCTTTTTTGCCCACGGCCGGGCAAGAGGGAAGGGATTTCCTTCTTAATTCTTGCTT
GATTAGATTGATACATCTCCTCTCTTTATATAGAGAGGTTTACTTGACTCTCAAGCAAGGCTTACTTGACCCCTAAGCAA
ACGACCCTTATCTCTAATTAACCCTAAGACTAATGGGCCCATTAGGCCCATTACATACTCTAACAGTTACTCAGATTAGA
ATTTTGGCAACAAATTGGATAAGATGCCTAAGAATACTCCACATGGAAGGCAAACCTTGAGATGGAACTACATAGTCAAA
ATTTGCTTTCTAAAGTATTTGATAAGTTCCGTTTGAATTAAGGTAGGGGCAAC-ATTAGGACATTTGGATCATAACTCAA
CTTGAAATTTTCCTTGATAAGCTTGTGCAGAATTAAGCTTTCTTATTGGAGTCTGGAGCTAATAATGCATTTTCTGATTA
ATTGGCTGTAGGAAGGGATGGGTTGACCCACAACATGTTGGAGATGATACATTGCCATTGGAGGCGCCAGGAGGTCTGCA
AAGTGAGATCTCGAGGAGTACCGACTGTTGATATGAACAACCTTTGTTATCACCTTGAGGTATACTTTTTCTACAACTTT
CCCATTCAGTTATGATCATGTGCTTGTGTTGATGTCATTCTCTGAGGATCTATATAA-TTGAACTATAATTTGTTGCGAC
ATCTAAGAGAATCCAGCTGCCATTAGATGAACCTAGTTCAGTCCAGGAGTATCCAGAG----------------------
----TTAGTTCAGTCTGGGATATCCAAACGGGCGC-----TTCGAGATAGGCCGTTGAGAGTCGAGAGAGAGCCGCAGCT
TCCAGCCCGATCCCCTATCTTCTCCGA---------CGGC---------CGGAGCAGATAAGGGAGAGGTGCTTGGTGTA
GTTATGTGAATAAAGTATCTAGTTTTAGGTTGT------GTTGTGCCCATGCGGTGTCTGGCGTTATGCTGATGTGGAGG
A--TGCCGCCGCTGCGGGCGAGCAGCGGCCGATGGCTATCGGTGGTGGCC--------------GGCTAGAGATCAGCTG
CTGCTATGGAACGCGATGCCGGCCTCTGCACCAATAAGCTCGACTGGTTCCATGCTATGGAGGTACTCTGCTCTGTCTCC
AGTTTCCAAGGTCATCTTGGTGGTGGAATCGAAGCAGAGAGGAGATGGTGATCCTAATCGGGTTTGTGCTTATCTATGGT
GGCTGATTGGGACTGGCTACGGCGCCAGCCAAGGTGCTCGGCTGCCGGCTGGCCCCATCTCGCCGCCGCACGTGGTGGCC
GAAGGGCGGCCTTCTTGTTTCTTCCTCCCTGCCAAGGA-GCCTATAGGGAGGCAGC--------TCATCTTCTCCATGGA
-------ATCTATGGCGTGGTGCCATGGAAGCTCCGCCGTCCCAAGTGGTATTGTCCCCGGCGACGACGTGGCTGCACCC
---ATGAAGTTGTCAGGGACCCAATTGCGTTGCTCATCTGGTTGTTGGGGTCCTCTTTGTAAAATGCAGGGACCAGTTTG
CTATTTAGGATTAGTTCTGGGTCCTTTTGCATTCTGCTGTGTACCACCG---TTTT---AATATC-AATGCAGTTTCGGG
GTCCTTCTGGACCCCTCTCTCGTTCAAAAAAAAAGTTAGTTCAGTCCAGGAGTATCCAGAGTGAGTAGGAGTCCTAACAT
AAGTTTGAGTCTAAAGTTGGTTGTGTTCAAGTCAGGTTGGGATAGCTCTGTAAAGGAGCAGTTTTATAATAGTCCCAGCT
GTACTGTTCAGTGAACAGTAACCAACCTAAAAAGT---------------------------------------------
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>chr4A_824
CGT-----------------------------------------------------------------------------
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-------------------------------GCGC-----TTCAAGAGAGGCCGTTGAGAGTCGAGAGAGAGCCGCATCT
TCCAGCTCGATCCACTATCTTCTCAGA---------CGGCT---------GGAGCAGAAAAGGGAGAGGTGCTCGGTGTA
GTTCTGTGCATAGAGCATCTAGTTTTAGGTTGT------CTTCTGCCCATTTGGCGTCTAGTGATATGTCGATGTGGAGG
A--TGCCACAGGCGCAAGCGAGCAGTGGTTGGTGGCTTTCGGTGGTGGCGATCCTGGCGGTGCTGGCTGATGGTCAGCTG
CCGCTATAGAACACAAAGCCGGTGCCTCCACAAATAAGCTC-CCTGGTTCTGTCCTACGGA--------GCACTCTCTCA
AGCTTCCAAGGTCACCATAGTGGTTGAATTGAAGCAGAGAGGAGATGGTGATCTTGATCAGGTTTGTGATCATCCTCGGT
GGCTGATTGGGACTGGTTATAGCGCTAGCCAAGGTGCTTGGTTATGGGCTGACTCCATGTCGCCGCCTTACATGTAGGTT
GAAGAGCGGCCTTCTTATTTCTTCCTCTCGACCAAAGA-GCCTGAAGGGAGGCAAC--------TCATCTAGTCATCTTC
TTCATGCGTCTATGACGTGGTTCCATGGAAGCTTCTCCGTCCCAAGAGGCGATGTCCCTAACGACGACGTGGCTACAACC
---ATGAAGATGTCAGGGACCCGATTACGTTTCTCATCCAGTTGTTGAGGTCTGCTATATAAAATGCATG-ACCAGTTTG
C-------------------------------------------------------------------------------
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-------------------------------
>chr1D_830
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----------------------------------C-----TTCGAGAGAGCCCCTTGAGAGTCGAGAGCGAGCAACCGTT
CCCGGCCCGATCCCCTATCTTCTCCGATGGCGTAGCCGGCC---------GGAGCAGAGAAGGGAGAGGTACACGGAGTA
GTCTTGTATATAGCGCGTCTAGTTTTAGGTGGT------ATTCTGCCCATGTGGCGTATGGCGGTATGCCGATGTGGATA
G--CGCCGCCGCCGTGGGCGAGTAGCGGCCGGTGGCTTACGGCGGTGGTCTTCATGGTGGTGCTGACTGGAGGTCAGTCG
CTGCCGTCGAGCGCATCGTCGGCTACTCCACCAATAAGCTCGCCTGGTTCCCTGTTCTGGAGGTGCTCCGCTTCCTCTCC
TGCTTCTATGGTCGCCGTGGTGGTGGAGTTGAAGCAGGGGAAAGATGGAGGTCCAGATCGGGTTTGTGCTCATCCCCGAT
GGCTGCTGGTGAATGGCTACGGCGCCGGCCATGGCGCTTGGCTGCCGGCCGTTTCTTCCATGCCATCGGATCTGCTGGCC
GAAGGGCGGC---CGTACTTCTTCCTTCCGGCTATGGA-GCCAATTGGGAGGCAGTG--------CTTCTTCAACATGGA
-------GTCCGCGGCGAGGTGTCGTGGAGGCTTTGCCACACCAAGTGGTGTTGTCCCCGGCGGTGGCAAGGTTGCATTC
GTGATGAAGGTGCTTGGGACCCGATCGCGTTTTTCATTTGGTTGTGGGGGTCCTCTTTGTAAAATGCAGGGACCAGTGTG
TTATCTAGGTTTAGTTCGGGGTCCTTTTGCATACTGCTGTGTACCACCGCTGTTTT---ATTACT-AATGCAGTCTCGGG
GTCCTTCTGGACCCCTCTCTCGTTCAAAAAAAAA----------------------------------------------
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-------------------------------
>chr7B_839
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------------------------------------------------AGCCCCTTGAGAGTCGAGAGCGAGCAACCGTT
CCCGGCCCGATCCCCTATCTTCTCCGATGGCATAGCCGGCC---------GGAGTAGAGAAGGGAGAGGTGCACGGAGTA
GTCCTGTATATAGCGCGTCTAGTTTTAGGTGGT------ATTCTGCCCATGTGGCGTATGGCGGTATGCCGATGTGGATA
G--TGCCGCCGCCGCGGGCGAGCAGCGGCCGGTGGCTTACGGCGGTGGTCTTCATGGTGGTGCTGACTGGAGGTCAGTCG
CTGTCGTGGAGCGCATCGTCGGCTACTCCACCAATAAGCTCGCCTGGTTCCCTGTTCTGGAGGTGCTCCGCTCCCTCTCT
CGCTTCTATGGTCACCGTGGTGGTGGAGTTGAAGCAGGGGAGAGATGGAGGTCCAGATTGGGTTTGTGCTCATCCCCGAT
GGCTGCTGGTCAATGGCTACGGCGCTGGCCATGGCGCTTGGCTGCCGGCCATTTCTTCCATGCCATCGGATCTGCTGGCC
GAAGGGCGAC---CGTACTTCTTCCTCCCGGCTATGGA-GCCAATTGGGAGGCAGTG--------CTTCTTCGACATGGA
-------GTCCGCGGCGAGGTGTCGTGGAGGCTTTGCCGCACCAAGTGGTGTTGTCCCCGGCGGTGGCAAGGTTGCATCC
GTGACGAAGGTGCTTTGGACCCGATCGCGTTTTTCATTTGGTTGTGGGGGTCCTCTTTGTAAAATGCAGGGACCAGTGTG
TTATCTAGGTTTAGTTCGGGGTCCTTTTGCATATTGCTATGTACCACCGCTGTTTT---ACTACT-AATGCAGTCTC-GG
GTCCTTCTGGACCCCTCTCTCATTCAAAAAAA------------------------------------------------
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-------------------------------
>chr7B_842
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---------------------------------------------------CCGTTGAGAGTCGAGAGAGTTCCACCGCT
CCCGGCCCGATCCCTTATCTTCTCCGACGGCGACGCCGGCC---------GGAGCGGAGACGGGAGAGGTGCATGGCGTT
GTCCTATGTATATAGAGTCTAGGTATAGGTTGAGGTCGAGTAGTGCCCATGTGGCGTATGGCTGTATGCCGATGTGGAGA
G--CGCCGCCGCCGCGTACGAGCAGCGGCTGGTGGCTCACGGTGGCTGCGTCTCAGGCAAGGCTGGCTGGCGGCCAGTCG
CTGCCGAGGGGCGTGCTGCTGGCTCATCCACCAATAAGCTCGTCTGGTCCCCTGTTCTGGAGGCTCTCCGCTACTTCTCT
AGCTCGTGGCGTCGCCGTGGTGGTGAAGACGAAGAGTAGAAGAGATGGAGAACCAGATCGGGTCAGTGCTCTTATCCGGT
GGCTGTTTGGGAGTGGCCTTGGCGCCAGCTACGGCGTTCGGCGGCCGGCCGGCTCCATCACGTCATCGTACATGCTGGCC
GAAGGGCGGCCTTTCTACTTCTTCCTCCCGGCCAAGAT-GCCTAAAGGGAGGCAGC--------TCATCTTCTGCACGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTTAGTTGTCCCAAGTGGCAATGTCCCCGGCGACGGCGAAGTTACGGCC
GTGCAGAAGATGTCAAGGACCCGATTGCTTTTCTTATCTGGTTATTGGGGTCCTCTTTGTAAAAGACAGGGACCAGTGTG
TTATTTGCAGTTAGTTCTGGGTCCGTCTGTAAAATGCTGTGTACTTCATG---TTC---AGTGTT-AATGCAGCATCAGG
GTCCTTCTGGACCCGTCTTTTGTTCAAAAAAAAA----------------------------------------------
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-------------------------------
>chr1A_842
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---------------------------------------------------CCGTTGAGAGTCGAGAGAGTTCCACCGCT
CCCGGCCCGATCCCTTATCTTCTCCGACGGCCTCGCCGGCC---------GGAGCGGAGACGGGAGAGGTGCATGGCGTT
GTCCTATGTATATAGAATCTAGGTATAGGTTGAGGTCGAGTAGTGCCCATGTGGCGTATGGCTGTATGCCGATGTGGAGA
G--CGCCGCCGCCGCGTACGAGCAGCGGCTGGTGGCTCACGGTGGCTGCGTCTCAGGCAAGGCTGGCTGGCGGCCAGTCG
CTGCCGAGGGGCGTGCTGCTGGCTCATCCACCAATAAGCTCGTCTGGTCCCCTGTTCTGGAGGCTCTCCGCTACTTCTCT
AGCTCGTGGCGTCGCCGTGGTGGTGAAGACGAAGAGTAGAAGAGATGGAGAACCAGATCGGGTCAGTGCTCTTATCCGGT
GGCTGTTTGGGAGTGGCCTTGGCGCCAGCTACGGCGTTCGGCGGCCGGCCGGCTCCATCACGTCATCGTACATGCTGGCC
GAAGGGCGGCCTTTCTACTTCTTCCTCCCGGCCAAGAT-GCCTAAAGGGAGGCAGC--------TCATCTTCTGCACGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTTAGTTGTCCCAAGTGGCAATGTCCCCGGCGACGGCGAAGTTACGGCC
GTGCAGAAGATGTCAAGGACCCGATTGCTTTTCTTATCTGGTTGTTGGGGTCCTCTTTGTAAAAGACAGGGACCAGTGTG
TTATTTGCAGTTAGTTCTGGGTCCGTCTGTAAAATGCTGTGTACTTCATG---TTC---AGTGTT-AATGCAGCATCAGG
GTCCTTCTGGACCCGTCTTTTGTTCAAAAAAAAA----------------------------------------------
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-------------------------------
>chr7A_852
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-------------------------------------------------------------TCGAGAGAGAGTCGTGTCT
TCTGGCTCAACCCCCTATCTTCTCCGA---------CGGCT---------GGAGCAGAAATGGGAGAGGTGCTCGGTGTA
GTTATGTGAAAAGAGCATCTAGTTTTAGGTTGT------CTTCTGCCCATGTGGCGTCTAGTGATATGTCGATGTGCAGA
GGATGCCGCCGCTTCAAGCGAGCAGCGGTTGCTGGCTTTTGGTGGTGGCGATCCTGGTGGTGCTGGCTGATGGTCAGCTG
CTGCTATGGAACGCAAAGTCGGTGCCTCCACCAACAAGCTC-TGTGATTCTGTCCTACAGTGGCGCTTTGCTCTCTCTCC
ATCTTCCAAGGTCACTATGGTGGTGGAATCGAAGCATAGAGGAGATGGTAATCCTGATCGGGTTTGTGATCATCCTCGAT
GGCTGATTGGGACTGGTTGCAAAGCCAGCCAAGGTGCTCGGTTATCGGCTGACTCCATCTCGCCGTCTTACATGCAGGCC
GAAGGGCGGCCTTCTTATTTCTTCCTACTGGCCAAAAAGGCCTAAAGGTAAGCAGCACATCTAGTCATCTTCTCCGTGGC
-------ATCTATATCGTGGTGCCATGGAAGCTTCTCCGTCCCAAGAAGTGTTGTCCCTAACGACGACGTAGCTACAACC
ATGAAGAAGATGTCAGGGACCCGATTACGTTTCTCATCTAGT--------------------------------------
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-------------------------------
>chr5A_868
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-----------------------------------------------------------------------------GCT
CCCGGCCCGATCCCTTATCTTCTCAGACGGCGACGCCGGCC---------GGAGCGGAGACGGGAGAGGTGCATGGCGTT
GTCCTATGTATATAGAGTCTAGGTATAGGTTGAGGTCGAGTAGTGCCCATGTGGCGTATGGCTGTATGCCGATGTGGAGA
G--CGCCGCCGCCGCGTACGAGCAGCGGCTGGTGGCTCACGGTGGCTGCGTCTCAGGCAAGGCTGGCTGGCGGCCAGTCG
CTGCCGAGGGGCGTGCTGCTGGCTCATCCACCAATAAGCTCGTCTGGTCCCCTGTTCTGGAGGCTCTCCGATATTTCTCT
AGCTCGTGGCGTCGCCGTGGTGGTGAAGACGAAGAGTAGAAGAGATGGAGAACCAGATCGGGTCAGTGCTCTTATCCGGT
GGCTGTTTGGGAGTGGCCTTGGCGCCAGCTACGGCGTTCGGCGGCCGGCCGGCTCCATCACGTCATCGTACATGCTGGCC
GAAGGGCGGCCTTTCTACTTCTTCCTCCCGGCCAAGAT-GCCTAAAGGGAGGCAGC--------TCATCTTCTGCACGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTTAGTTGTCCCAAGTGGCAATGTCCCCGGCGACGGCGAAGTTACGGCC
GTGCAGAAGATGTCAAGGACCCGATTGCTTTTCTTATCTGGTTGTTGGGGTCCTCTTTGTAAAAGACAGGGACCAGTGTG
TTATTTGCAGTTAGTTCTGGGTCCGTCTGTAAAATGCTGTGTACTTCATG---TTC---AGTGTT-AATGCAGCATCAGG
GTCCTTCTGGACCCGTCTTTTGTTCAAAAAAAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------
>chr3B_961
--------------------------------------------------------------------------------
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-------------------------TAGGTTGAGGTCGAGTAGTGCCCATGTGGCGTATGGCTGTATGCCGATGTGGAGA
G--CGCCGCCGCCGCGTACGAGCAGCGGCTGGTGGCTCACGGTGGCTGCGTCTCAGGCAAGGCTGGCTGGCGGCCAGTCG
CTGCCGAGGGGCGTGCTGCTGGCTCATCCACCAATAAGCTCGTCTGGTCCCCTGTTCTGGAGGCTCTCCGCTACTTCTCT
AGCTCGTGGCGTCGCCGTGGTGGTGAAGACGAAGAGTAGAAGAGATGGAGAACCAGATCGGGTCAGTGCTCTTATCCGGT
GGCTGTTTGGGAGTGGCCTTGGCGCCAGCTACGGCGTTCGGCGGCCGGCCGGCTCCATCACGTCATCGTACATGCTGGCC
GAAGGGCGGCCTTTCTACTTCTTCCTCCCGGCCAAGAT-GCCTAAAGGGAGGCAGC--------TCATCTTCTGCACGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTTAGTTGTCCCAAGTGGCAATGTCCCCGGCGACGGCGAAGTTACGGCC
GTGCAGAAGATGTCAAGGACCCGATTGCTTTTCTTATCTGGTTATTGGGGTCCTCTTTGTAAAAGACAGGGACCAGTGTG
TTATTTGCAGTTAGTTCTGGGTCCGTCTGTAAAATGCTGTGTACTTCATG---TTC---AGTGTT-AATGCAGCATCAGG
GTCCTTCTGGACCCGTCTTTTGTTCAAAAAAAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr6D_1122
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----------------------------CACCAATAAGCTCGTCTGGTCCCCTGTTCTGGAGGCCCTCCGCTACTTCTCT
AGCTCGTGGTGTCGCCGTGGTGGTGAAGACGAAGAGGAGAAGAGATGGAGAACCAGATCGGGTCAGTGCTCTTATCCGGT
GGCTGTTTGGGAGTGGCCTTGGCGCCAGCTACGGCGTTCGGCGGCCGGCCGGCTCCATCACGCCATCGTACATGCTGGCC
GAAGGGCGGCCTTTCTACTTCTTCCTCCCGGCCAAGAT-GCCTAAAGGGAGGCAGC--------TCATCTTCTTCACGGA
-------GTCTATGGCGTGGTGCCATGGAAGCTTAGTTGTCCCAAGTGGCAATGTCCCCGGCGACGGCGAGGTTACGGCC
GTGCAGAAGATGTCAAGGACCCGATTGCTTTTCTTATCTGGTTGTTGGGGTCCTCTTTGTATAAGACAGGGACCAGTGTG
TTATTTGCAGTTAGTTCTGGGTCCGTCTGTAAAATGCTGTGTACTTCATG---TTTTTCACTGTT-AATGCAGCATCGGG
ATCCTTCTGGACCCGTCTTTTGTTAAAATAAAA-----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3B_1816
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----------------------------AAAAAGTCTATATAAGGATGTACCCCCCTTGTAAGCAAGGCAGGCAATGAAA
TATGTAGTTCCTACCTATGCTTCTGTTCTACCCCTGCAATTCTCCAATCTTTCCTCATTACCCTTCTCCTGTACCACGAC
CCCTATACAGCAACTACCCTCGCGCACAGCTAGTATCCCACCAAGTAACTTCCGTAGCCAACGTCGGCCGCAACAAATTT
ATTCTGCACACAAGTTACAA-GGTAGGGCTGGCGCAGTGGTAAGAGTCTCTCCACTTGTGGCCTGGAGGTCCTGTGTTTG
AACCAGCCTCTTTGCAGAATTATTATTCAAGGGTAAGGCTGTCTAGAAATTCTCTTCCCTAGACCCCACCTTGTGTGGGA
GCTTTCAGCACTGGGTACGCCCTTTAAGTTATGAGTTCGTGCCCCAAGGTCCAGGGAAACTTGTTTACTTGTTTGGTTTT
AGACATTCGTGTTTCTTAGCAGCTA-------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
GTAGTAGTGTAATAAGAGCTCAATTGTCATA
>SNPs
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-------------------------------------------------------------------------S------
--------------------------------------------------S-----------------------------
-----------------------------------------------------S--------------------------
-S------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------------S---------------------------------------S---------S--------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------S-----------
------------------------------------------------------------S-------------------
--------------------------------------------------SS-----------------S----------
--------------------S------------------------------------------------------S----
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-------------------------------
>forward_2217
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-----------------------------------AGCTTTCTTATTGGAGTCTGGG-----------------------
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-------------------------------
>reverse_4171
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----------GCTTTGGAAAGGTGCATGCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
