>input_sequence_74237
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-------------------------------------------------------------ATGCAAGGCCTCGCGGCAT
CTTCCATGCTGTCTCTGACCGTC---GTTGTCGTTGTGTTCCTGAT---------CGGCAT---GGCCGACCACTCCGAC
GGCCGGAGGAGGGTCATCTCCAGCAGCTCCGACGAACCGTGCAAGGAGATGACGCTCTACCTCCATGACATCCTCTATAA
TGG---TGCCAACAACAGCGCGAACGCGACTTCGGCAGCCGCGACCAAGCCGACGGCGCT---------------GAGCA
CTACGCACTGGAAGAACGGCACCTTCTTCGGCACGCTCGTGGTGTTCGATGACCCCGTGACTGTCGGGAAGGCACTGCCC
GT---GGCAGAGGCGGGGGAAGAGCCGGCG--ATACGCGCTCAGGGGTTTTACTTCTATGACAAGAA---GGAGTCGTAC
AATGCGTGGTTCGGCTTCTCCATCGTCTTCAACTCGACGGCCGCCACGGGCACCATCAACCTCATGGGTGCGGACCTCAT
GTACGAGGTCACGAGGGATATCTCTGTGGTCGGCGGCACGGGCGACTTCTTCATGACGCGCGGCATCGCCACCCTCCGCC
TTGACGCCTACGAGGGAACAGTGTACTTTCGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACATCTGA---------
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>chr2B_1_TraesCS2B01G028000
GATTCGTTTTCACCATTAAATCCCTCGCGACGAGATCTTCAAAACTAGATCTCATATCAATATATTTCGATGAATT---T
TTTTTGGGTTAAAAGTTGCCATGTCTATTGCACATGAATTGCCTTGATGTTTACACTAAAATTGCCATGTTATGTTTCAG
CTATTTTCTTCTATATTAAAAAGTAAATCTTGACATATTATGAAACGGAGAATTAAGAAACTAGACTTTCCATGCACCAT
AAACTAAAACTGCCATGGTACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTCATGATCAAAATACTGGA
ATTGCCATCATCAAAAACTAAAATTGCCTTGATCTACAAATTAAAAGTGCCACATGGCAACTTTATTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGTAAAAAAAA-TA-ATTCGTCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAGACGGATTTAATAGTGAAAACGGATTTTTAATTCACTTTTTTAATTAGGAGATAAAATAT-TTT
TAAGTCGAAAACCAAAAAGATTTTTGCTGATGTCAGCTGTTCATACGTGGCAAAATGAGTGATAATGGAGGCGTGTGGGC
GACGTGCAAACGCCCACACATGTAGGCGTTAGTTTTTCCGTTTGTTTTTGGG-AAGATACTTTGCTTGTCAAATAGGCAA
ACACCCGGTCGTTTTC----------GGAAAAAGTGTGGTTGATTTTTCTGGTAAGCCGATGATATGGCTACAGCAGAGG
CACCGTACAGTATCTAGCTACCACGCACTGTGCCCATATTTGGTGTACCAACTTTCTGATTGATGTGCTACGATTCTCAA
GGCACCCCACTCTCTGTCTCTCTCTC----GGCTCCCTATATATGGCATGCACAGGTGGATCGAACTCTCAACACCAGCT
CCCCACTGCTCTACACAAAGTTCGGTTTTTACACTGGTAATTAATAGTTGCGCCGACAACAATGCAAGGCCTCGCGGCAT
CTTCCATGCTGTCTCTGACCGTC---GTTGTCGTTGTGTTCCTGAT---------CGGCAT---GGCCGACCACTCCGAC
GGCCGGAGGAGGGTCATCTCCAGCAGCTCCGACGAACCGTGCAAGGAGATGACGCTCTACCTCCATGACATCCTCTATAA
TGG---TGCCAACAACAGCGCGAACGCGACTTCGGCAGCCGCGACCAAGCCGACGGCGCT---------------GAGCA
CTACGCACTGGAAGAACGGCACCTTCTTCGGCACGCTCGTGGTGTTCGATGACCCCGTGACTGTCGGGAAGGCACTGCCC
GT---GGCAGAGGCGGGGGAAGAGCCGGCG--ATACGCGCTCAGGGGTTTTACTTCTATGACAAGAA---GGAGTCGTAC
AATGCGTGGTTCGGCTTCTCCATCGTCTTCAACTCGACGGCCGCCACGGGCACCATCAACCTCATGGGTGCGGACCTCAT
GTACGAGGTCACGAGGGATATCTCTGTGGTCGGCGGCACGGGCGACTTCTTCATGACGCGCGGCATCGCCACCCTCCGCC
TTGACGCCTACGAGGGAACAGTGTACTTTCGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACATCTGATAACTTACT
GCTACTTCTGTTAACTTACTCCTCAAGTTCACATTGAGCCACAATAATAAGGAGTGATGTGCCGTTGTTG---GCAAAGC
ACGGGCCTTCGTCTGGATTGTGTGTGTGTGTGT--GTGTGTGTTTTGCGGGGATTTGGATTTTGTGTTGTGGCCTTTCCA
GCTTCTATGTGTGCCCATAACCGTTTCAATAGTGTGACACTATTTGTTTCACATAACTATATATTTGTATTATGTCTAAA
TAAACATATAGGTGATATACAGGTGAGGTGACCTACATTTCACTTATGCCCAAAAATATTAAATATTCATGTGTTTTTTA
AATGTGCTTTGTATGTGAAAAAATGTCAAATGATCTTAAAAGAGAGATGTTCATGTGGTGAAAAAAGTGTTCATCAACTC
ATCAATATCTCTTCCAGAATCAAATCATGTACGAGTTCCCGAAAGCTTTGCCCTTCCCCTCAGCCCCGCGCCGCCA-CCC
CGCAGGCGGCTCGGAT-GGCGCCGCCATCCCCCGTTTTTAGCTGCTGTCCCTCGTCCCCACCCCACCCTCCCCTGCCGAT
GGCCGGAGCCGCCAAGGCAAAGCCCCTGCAATGGCTGGCGGCGGGGGCTTCTTCCTTCTCCACTCGGATACGGGCAACGC
GGGGTGGCCCGCCCGTC-GGAGGCGTCAGGCGCGCGCGGTGCCTGGCGGCGCTGCGGCGGTGTCTCCGGTCGGCGATGTG
CCGTGTGATGATGGCGTCCTGGCA---------------------ACTGCGTGCCCGTGGCCACGTCCTGGATCAGATCT
GGGCGTCAGTGGGCTGCGGGTGGCTCGGGAGCAAGGG-------CTTCTCCAGCTCTGGTTGGTTCTCTGGGGGCGCTTG
GTGGCGGTTGGAGCAAGGGCTTCGGGTGGTCGCGTGCCCGGCCGGGTCTCACGGATGGAATCCGGCGGGCGGCGCGGGTT
GGGGCAGTGGCCGTGGGCGTCCGCGGTGCTGTGTATGGTCCGTGCAGCGGCCATCCGGCGACGCAGC
>chr6B_1
GATCCGTTTTCATCATTAAATCCCTCGCGACGAGATCTTCAAAACTAGATCTCATATCAATATATTTCGATGAATT---T
TTTTT-AATTAAAAGTTGCCATGTCTATTGCACATGAATTGCCATGATGTTTATACTAAAGTTGCCATGTTATGTTTCAG
CTATTTTCTTCTATATTAAAAATTAAATTTTGACATATTATAAAATGGAGAATTAAGAAACTAAACTTGACATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTCATGGTCAAAGTACTGGA
ATTGCCATCATCAAAAACTAAAATTTCCATGATCTACAAACTAAAATTGCCATATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGAC--AAAAAA-AA-TTTCGTCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAGATGGATTTAATGGTGAAAATGGATTTTTAATTCACTTTTTTAATTAGGAGATAAAAAAAATTT
-AAGGCAAAAACCAAAAAGATTTCTGCTTATGTCATCTGTTCATACGTGGCTGAATGAGTGGTGATGGAGGCGTGTGGGC
GATGTGCAAATGCCCACACATGTGGGCGTTAGTTTTTCCGTT--------------------------------------
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>chr5B_1
GATCCGTTTTCACCATTAAATCCCTCGCGACGAGATCTTCGAAACTAGATATCATATCAACATATTTTGATGAATT---T
TTTTT-TGTTAAAAGTTGCCATGTCTACTGCACATGAATTGCCATGATGTTTACATTAAAGTTGCCATGTTATGTTTAAG
CTATTTTCTTCTATATTAAAAAGAAAATTTTGACATATTATAAAACGGAGAATTAAGAAACTAGACTTGCCATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATCGTTCATGCAAAAAAATATTTTCATGGTCAAAATACTGGA
ATTGCCATCATCAAAAACTAAAATTGCCATGATTTACAAACTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACGGTGTAAACATCATGGCAACTTTTGGGC---AAAAA-AA-ATTCATCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAGACGGATTTAATGGTGAAAACGAATTTTTAATTCACTTTTTTAATTAGGAGATAAAATAT-TTT
-AAGCCGAAAACCAAAAAGATTTTTACTGATGTCATCTGTTCATATGTGGCAAAATGAGTGGTGATGGAGGCGTGTGGGC
GATGTGCAAACGACCACACGTGTGGGCGTTAGTTTTTC------------------------------------------
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>chr4B_1
GATCCGTTTTCACCATTAAATCCCTCGCGACGAGATCTTCAAAACTAGATCTCATATCAATATATTTCGATGAAATTA-T
TTTTT-GGTTAAAAGTTGCCATGTCTATTGCACATGAATTGCCATGATGTTTACACTAAAGTTGCCATGTTATGTTTCAA
CTATTTTCTTCTATATTAGAAAGTAAATTTTGACATATTATAAAATGGAGAATTAAGAAACTAAATTTGCCATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGACATGGTTCATGCAAAAAAATATTTTCATGGTCAAAGTACTGGA
ATTGCCATCATCAAAAACTTAAATTGCCATGATCTACAAACTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGCA-AAAAAA-AA-TTTTGTCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAGACGGATTTAATGGTAAAAATGGATTTTTAATTCGCTTTTTTAATTAGGAGATAAAACAT-TTT
TAAGCCAAAAACCAAAAAGTTTTCTGCTGATGTCATCTGTTCATACGTGGCAAAATGAGTGGTGATGAAGGCGTGTGGGC
GATGTGCAAATGCCCACACGTGTGGGCGTTAGATTTTCCATTCTTTTTT-------------------------------
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>chr3B_1
GATCCGTTTTCACCGTTAAATCCCTCGCGACGAGATCTTCGAAACTAGACCCCATATCAATATATTTCGACGAATTTTTT
TTTTT-GGTTAAAAGTTGCCATGTCTATTGCACATGAATTGGCATGATGTTTACACTAAAGTTGCCATGTTATGTTTCAG
CTATTTTCTTCTATATTAAAAAGTAAATTTTGACATATTATAAAACGGAGAATTAAGAAACTAGACTTGTCATGCACCAT
AAACTAAAATTGCTATGATACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTCATGATCAAAATACTGGA
ATTGCCATCATCTAAAACTAAAATTGCCATGATCTACAAACTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTCTAAACATCATGGCAACTTCTAGGC--AAAAAA-AA-TTTCGTCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAGACGGATTTAATGATGAAAACGGATTTTTAATTTGCTTTTT-AATTAGAAGATAAAATAT-TTT
TAAGACGAAAATCAAAAAGATTTCTGCTGATGTCATCTGTTCATACGTGGCAAAATGAGTGATGATGGAGGCGTGTGGAC
GATGTGCAAACGCCCACACGTGTGGGCGTTAGTTTTTC------------------------------------------
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>chr6B_2
-ATCCGTTTTCACCATTAAATCCCTCGCGACGAGATCTTCAAAACTAGATATCATATCAATATATTTCGACGAAATTTT-
TTTTT-GGTTAAAAATTGCCATGTCTATTGCACATGAATTGCCATGATGTTTACACCGAAGTTGCCATGTTATGTTTCAG
CTATTTTCTTCTATATTAAAAAGTAAATTTTGACATATTATAAAATGGAGAATTAAGAAACTAGACTTGACATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTCATGGTCAAAGTACTGGA
ATTGCCATCATCAAAAACTAAAATTGCCATGATCTACAAACTAAAATTGCCACATGACAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGC--AAAAAA-AA-ATTCGTCGAAACATATCAACATGGA-TCTAGTT
TTGAAGATCTCGTCGAGATGGATTTAATGGTGAAAACGGATTTTTAATTCGCTTTTTTCATTAGGAGATAAAACAT-TTT
TAAGCCAAAAACCAAAAAGATTTCTGCTAATGTCATCTGTTCATACGTGACAAAATGAGTGGTGATGGAGACGTGTGGGT
GATGTACAAACGCCCACATGTGTGGGCGTTAGTTTTTTCGTTT-------------------------------------
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>chr6B_5
----CGTTTTCACCATTAAATCCCTCGCGGCGAGACCTTTAAAACTAGATCTCATATCAATATATTTTGACGAATTTTT-
TT-TG-GGTTAAAAGTTGCCATGTGTATTGCACATGAATTGCCATGATGTTTACACTAAAGTTGCCATGTTATGTTTTAG
CTATTTTCTTCTATATTAAAAAGTAATTTTTGACATATTATAAAACGGAGAATTAAGAAACTAGACTTGCCATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTCATGGTCAAAATACTGGA
ATTGCCATCATCAAAAACTAAAATTGGCATGATCTACAAACTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGC--AAAAAA-AA-TTTCGTCGAAACATATCAACATGGGGTCTAGTT
TTGAAGATCTCGTCGAAATGGATTTAATGGTGAAAAGGGATTTTCAATTCACTTTTTAAATTAGGAAATAAAATAT-TTT
TAAGCCGAAAACCAAAAAGATTTCTGCTGATGTCATCTGTTCATACGTGGCAAAATGAGTGGTGATGGAGGCGTGTGGGC
GATGTGCAAACGCCCACACGTGTGGGCGTTAGTTTTTCCG----------------------------------------
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>chrUn_6
-----GTTTTCACCATTAAATCCCTCGCGGCGAGATTTTTGAAACTAGATCTCATATCAATATATTTCGACGAATTTTT-
TT-TT-TGTTAAAAGTTGCCATGTCTATTGCACATGAATTGCCATGATGTTTACACTAAAATTGTCATGTTATGTTTCAG
CTATTTTCTTCTATATTAAAAAGTAAATTTTGACATATTATAGAACGGAGAATTAAGAAACTAGACTTGTCATGCACCAT
AAATTAAAATTGCCATGATACATGCACTTAAAATTGCCATGGTTCATGCAAAAAAATATTTTTATGGTCAAAATACTGGA
ATTGCCATCATCAAAAACTAAAATTGTCATGATCTACAAACTAAAATTGCCACATGGCAACTTTAGTTTAAGCATCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGC--AAAAAG-AACATTCGTCGAAACATATCAATACGGGGTCTAGTT
TTGAAGATCTCGTCGAGACGGATTTAATGGTGAAAATGGATTTTTAATTCACTTTTTTAATTAGGAGATAAAATAT-TAT
TAAGCCGAAAACCAAAAAGATTTCTGCTGATATCATCTGTTCATACGTGACAAAATGAGTGGTGATGAAGGCGTGTGGGC
GATGTGCAAACGCCCACACGTGTGGGCATTAGTTTTTCCGTTTTGTTTTGGGG---------------------------
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>chrUn_6
-----GTTTTCACCATTAAATCCCTTGCGACGAGATCTTCAAAACTAGATCTCATATCAATATATTTCGACGAAATTTT-
TTTTG-GGTTAAAAGTTGCCATGTCTATTGCACATGAATTGCCATGATGTTTACACTAAAGTTGCCATGTTATGTTTCGG
CTATTTTCTTCTATATTAAAAAGTAAATTTTGACATATTATAAAATGGAGAATTAAGAAACTAGACTTGCCATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATAGTTCATGCAAAAAAA-ATATTCATGGTCGAAGTACTGGA
ATTGCCATCATCAAAAACTAAAATTGTCATGATCTAAAAATTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGC--AAAAAAAAA-TTTCATCGAAACATATCAACATGGGGTCTAGTT
TTGAGGATCTCGTCGAGACGGACTTAATGGTGAAAACAGATTTTTAATTCACTTTTTTAATTAGGAGATAAAACAT-TTT
TAAGCCAAAAACTAAAAAAAATTCTGCTAATGTCATCTGTTCATACGTGGCAAAATGAGTGGTGATGGAGGCGTGTGGGC
GATGTGCAAACGCCCACACGTGTGTGTGTTAGTTTTTCCGT---------------------------------------
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>chrUn_6
-----GTTTTCACCATTAAATCCCTTGCGACGAGATCTTCAAAACTAGATCTCATATCAATATATTTCGACGAAATTTT-
TTTTG-GGTTAAAAGTTGCCATGTCTATTGCACATGAATTGCCATGATGTTTACACTAAAGTTGCCATGTTATGTTTCGG
CTATTTTCTTCTATATTAAAAAGTAAATTTTGACATATTATAAAATGGAGAATTAAGAAACTAGACTTGCCATGCACCAT
AAACTAAAATTGCCATGATACATGCACTTAAAATTGCCATAGTTCATGCAAAAAAA-ATATTCATGGTCGAAGTACTGGA
ATTGCCATCATCAAAAACTAAAATTGTCATGATCTAAAAATTAAAATTGCCACATGGCAACTTTAGTTTAAGCACCATGG
CAACTACAGTGTAAACATCATGGCAACTTTTGGGC--AAAAAAAAA-TTTCATCGAAACATATCAACATGGGGTCTAGTT
TTGAGGATCTCGTCGAGACGGACTTAATGGTGAAAACAGATTTTTAATTCACTTTTTTAATTAGGAGATAAAACAT-TTT
TAAGCCAAAAACTAAAAAAAATTCTGCTAATGTCATCTGTTCATACGTGGCAAAATGAGTGGTGATGGAGGCGTGTGGGC
GATGTGCAAACGCCCACACGTGTGTGTGTTAGTTTTTCCGT---------------------------------------
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>chr2B_675
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----------------------------------------TTTGTTTTTGGGGAAGATACTTTGCTTGTCATATAGGCAA
ACACCCGGTCGTTTTCTTTAAATTTTGGAAAAAGTGTGGTTGATTTTTCTGGTAAGCCGATGATATGCC-----------
-----TACAGTATCTAGCTACCACGCACCGTGCCCATATTTGGTGTACCAACTTCCTGATTGATGTGCTACGATTCTCAA
GGCACCCTACTCTCTGTCTGTCTCTCTGTCGGCTCCCTATATATGGCATGCACAGGTGGATCGAACTCTCAACACCAGCT
CCCCACTGCTCTACACAAAGTTCGGTTTTTACACTGGTAATTAATAGTTGCGCCGACAACAATGCAAGGCCTCGCGGCAT
CTTCCATGCTGTCTCTGACCGTC---GTTGTCGCTGTGTTCCTGAT---------CGGCAT---GGCCGACCACTCCGAC
GGCCGGAGGAGGGTCATCTCCAGCAGCTCCAACGAACCGTGCAAGGAGATGACGCTCTACCTCCACGACATCCTCTATAA
TGG---TGCCAACAACAGCGCGAACGCGACTTCGGCAGCCGCGACCAAGCCGACGGCGCT---------------GAGCA
CTACGCACTGGAAGAACGGCACCTTCTTCGGCACGCTCGTGGTGTTCAATGACCCCGTGACTGTCGGGAAGGCACTGCCC
GT---GGCGGAGGCGGGGGACGAGCCGGCG--ATACGCGCTCAGGGGTTTTACTTCTATGACAAGAA---GGAGTCGTAC
AATGCGTGGTTCGGCTTCTCCATCGTCTTCAACTCGACGGCCGCCACGGGCACCATCAACCTCATGGGCGCGGACCTCAT
GTACGAGGTCACGAGGGACATCTCTGTGGTCGGCGGCACGGGCGACTTCTTCATGACGCGCGGCATCGCCACCCTCCGCC
TTGACGCCTACGAGGGAACAGTGTACTTCCGGCTGCAGATGGACATCAAGCTCTACGAGTGCTACATCTGAT--------
------------AACTTACTCCTCAAGTTTACATTGAGCCAC---AATAAGGAGTGATGTGCCGTTGTTGTTGGCAAAGC
ACGGGCCTTCGTTTGGATTGTGTGTGTGTGTGTGTGTGTGTGTTTTGCGGGGATTTGGATTTTGTGTTGTGGCCTTTCCA
GCTTCTATGTGTGCCCATAACAGTTTCAATAGTGTGACACTATTTGTTTCACATAACTATATATTTGTATTATGTCTAAA
TAAACATATGGGTGATATACAGGTGAGGTGACCTACATTTCACTTATGCCCAAAAATATTAAATATTCATGTGTTTTTTA
AATGTGCTTTGTATGTGAAAAAATGTCAAATGATCTTAAAAGAGAGATGTTCATGTGGTGAAAAAAGTGTTCATCAACTC
ATCAATATCTCTTCCAGAATCAAATCAGGTAGGAGTTCCCGAAAGCTTTGCCCTTCCCCTCAGCCCCGCGCCGCCA-CCC
CGCAGGCGGCTCGGAT-GGCGCCGCCATTCCCCGTCTTTAGCTGTTGTCCCTCGTCCCCACCCCACCCTCCCCCGCCGAT
GGCCGGAGCCGCCAAGGCAAAGCCCCTGCGATGGCTGGCGGCGGGGGCTTCTTCCTCCTCCGCTCGGATCCGGGCAACGC
GGGGTGGCCCGCCCGTC-GGAGGCGTCAGGCGCGCACGGTGCCTGGCGGCGCTGCGGCGGTGTCTCCGGTCGGCGACGTG
CCGCAGCACGTTGGCGTCCTGGCA---------------------GCTGCGTGCCCGTGGCCACGTCCTGGATCAGATCT
GGGCATCAGTGGGCTGCGGGTGGCTCGGGAGGACCTCCGTCGGTCTTCTCCAGCTCTGGTTGGTTCTCTGGGGGCGGTTG
GTGGCGGC-GGAGCAAGGGCTTCGGGTGGTCGCGTGCCCGGCCAGGTCTCACGGATGGAATCCGGCGGGCGGCGTGGGTT
GGGGCAGTGGCCGTGGGCGGCCGCGGTGCTGT--ATGGTCCATGCAGCGGCCATCCGGCGACGCAGC
>chr2D_982
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------------------------------------------AAGAGTTGCACTGACAACAATGCAAGGCCTCGCGGCAT
CTTCCAAGCTGTCGCTGACCGTAGTGGTCGTCGCGGTGTTTCTGCT---------CGGCTT---GGCGGGCGCCGCCCAC
GGCAGGAGGAAGCTCGTCTCCAGCGCCAACGACGAGCCGTGCAAGAAGATGACGCTCTACTACCACGACATCCTCTACGA
CGG---CGGCAACAACACGGCGAACGCCACGTCGGCAGCGGCCACGGAGCCGACGGCGCT---------------GAGCA
ATA---------------GCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCCATGACCAAAAGGAAGGCGCTGCCC
GT---TGGAAA------TGAGCTGCCCACG--GCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAA---AGGGTCCTTG
AACTCGTGGTTCGCTTTCTCACTCGTGTTCAACTCCACGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCAT
GGGCGAGAGAACGCGGGACATCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGCA
CCGACGCCATGGAGGGCTTGTACTACTTCCGCT-----ATGGACATCAAACTCTACGAGTGCTATGTCTGAT--------
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>chr2B_993
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-----------------------------------------------------CGATAACAATGCAAGGCCTCGCGGCAG
CTTCAAGGGT---------CGTC---GTGCTCGCGACGTTTTTCCTGATCGGTTTCGGCGT------GGCCGCCGCCGAC
GGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCTTGCAGGCAGATGACGCTCTTCTACCACGACATCCTCCACGA
CGG---CGCCAACAACACGGCCAACGCGACGTCGGCGGCCGCGACGAGCCCACCGGCGCT---------------GAGC-
--------------AACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGCCAGGCGCTGCCC
GTCGGGGCCGA------GGAGGAGCCGGCG--GCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGG---TTCTTC
AACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAACCTCATGGGCGCCGACCTCAT
GGGCGAGGAGACGCGGGACATCTCCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCAACCATCCGCA
CGGACGCCATCGAGGGCCTCTACTACTTCCGCTTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA---------
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>chr2A_993
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-----------------------------------------------------CGACGACAATGCAAGGCCTCGCGGCAT
CTTCAAGGGC---------CGTC---ATGCTCGCGACGTTTCTCCTGATCGGTTTCGGCGT---CGCCGCCGCCGCCGAC
GGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGATGACGCTCTACTACCACGACATCCTCCACGA
CGG---CGCCAACAACACGGCCAACGCGACGTCAGCGGCCGCGACGAGCCCGCCGGCGCT---------------GAGC-
--------------AACGACACCTACTTCGGCATGCTGGTGGTGTTCGATGACCCGGTGACGGTGGGGCAGGCGCTGCCC
GCCGGGGCCGA------GGAGGAGCCCGCG--GCGCGCGCACAGGGGTTCTACTTCTACGACGGGAAGGGG---TCCTTC
AACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCACAGGGGCACCCTCAATCTCATGGGCGCCGACCTCAT
GGGCGAGGAGACGCGGGACATCTCCGTCGTCGGCGGCACCGGCGATTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGCA
CCGACGCCGTCGAGGGGTTGCTCTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA---------
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>chr2A_996
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--------------------------------------------------------CAACAATGCAAGGCCCCACGGCAT
CTTTCAGGGTGTCTTTGTCCATC---GTGGTCGCGGTGTTTCTCTT---------GGGCTCATCGGCGGCCGCTGCCCAC
GGCCTGAGGAGGGTCGTCTCCAGCAGCTCCGACGAGCCGTGCAACGAGATGACGCTCTACTACCACGACATCCTCTACAA
CGG---CGTCAACAACACGCGGAACGCGACGTCCGCGGCGGCCACCAAGCCCACGGCGCT---------------GAGCA
CGACCCACTGGAAGAACGGCACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCATTGACGGTGGGGAAGGCGCTACCC
GT---GGCCGG------GGAGGAGCCCGCG--GCGCGCGCCCAGGGGTTCTACTTCTACGACAAGCA---GGAGTCGTAC
ACCTCCTGGTTTGGCTTCTCCATCGTCTTCAACTCCACGGCGCACAAGGGCACCATGAACCTCGTCGGCGCGGACCTCAT
GGACGACAAGACGCGGGACCTCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCCACGCTCCGCC
TTGACGCCTCCGAGGGAGCCGTCTACTTCCGTCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA---------
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>chr2A_997
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---------------------------------------------------------AACAATGCAAGGCCTCGCGCCAT
CTTCCAAGCTGCCTCTGACCATC---GTGGTCGTGGTGTTTCTCCT---------CGGCAT---GGCGGGCGCCGCCCAC
GGCCTGACGAGGGTCGTCGCCAACAGCCCCGACGAGCCGTGCATGAACATGACGCTCTACTACCACGACATCCTCTACAA
CGG---C---AACAACACGGCCAACGCGACGACGGCGGCGGCCACCAAGCCCACGGTGCT---------------GGCCA
AGACCTACAGGAAGAACAGCACCTACTTCGGCGCGCTGATGGTGTTCAACGACCCCATGACGGTGGGGAAGGCGCTGCCC
CT---GGCCGG------GGAGGAGCCAGCGGCGCGCGCGCGCAGGGGTTCTACTTCTACGACAAGCA---GGAGTCGCTG
ACCTCCTGGTTCGGCTTCTCCATCGTGTTCAACTCGACGGCGCACAAGGGCACGCTCATCCTCGTCGGCGCCGACCTCAT
GGGCGACGCCACGCGGGACTTCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCACAACCATCCGCA
CTGACGCCATCGAGGGCCTCTACTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACCTCTGA---------
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>chr2D_998
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----------------------------------------------------------ACAATGCAAGGCCTCGCGCCAT
CTTCAAGGGT---------TGTC---GTGCTCGCGACGTTTTTCCTGATCGGTTTCGGCGT------GGCCGCCGCCGAC
GGCCGGAGGAGGCTCGTCTCCGGCAGCCCCGACGAGCCGTGCAGGCAGATGACGCTCTACTACCACGACATCCTCCACGA
CGGGGCC---AACAACACGGCCAACGCGACGTCGGCGGCGGCGACGAGCCCGCCGGCGCT---------------GAGC-
--------------AACGACACCTACTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGCCAGGCGCTGCCC
GCCGGGGCCGA------GGAGGAGCCGGCG--GCGCGCGCGCAGGGGTTCTACTTCTACGACGGGAAGGGG---TCGTTC
AACGCGTGGTTCGCCTTCTCGCTCGTGTTCAACTCCACGGCGCGCAGGGGCACCCTCAACCTCATGGGCGCCGACCTCAT
GGGCGAGGAGACGCGGGACATCTCCGTCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCCACGCTCCGCA
CCGACGCCGTCGAGGGGTTGCTCTACTTCCGCCTGCAGATGGACATCAAGCTCTACGAGTGCTACGTCTGA---------
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>chr2D_1080
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---------------------------------------------------------------------------CCGAC
AGCCGTAGGAGGCACATCTCCAGCAGCCCTGACGAGCCGTGCAAGAAGATGACGCTCTACCTCCACGACATCCTCTACAA
CGGTGTC---AACAACAGTGCCAACGCGACGGCGGCGCCGGCGACCAAGCCGACGGACCTGAGCACAACGCACTGGAGC-
--------------AACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCCGGTGACGGAGGGGACGGCGCTGCCC
ATCGGGC---A------GGAGGAGCCGGCG--GCGCGCGCGCAGGGGTTCTACTTCTACGACAAGAA---GGAGTCGTAC
AGCGGGTGGTTCTCCTTCTCGCTCGTGTTCAACTCAAAGGCATGCAGGGGCACCCTCAACCTCATGGGCGCCGATCCCAT
GGACGCGGAGACGCGTGACTTTTCCGTCGTCGGGGGCACCGGCGACTTCTTCATGGCGCGCGGCGTCGCGACGATCCACA
CCGACGCCACCGAAGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCT-----------
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>chr2B_1082
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-----------------------------------------------------------------------------GAC
AGCCGTAGGAGGCACATCTCCAGCAGCCCTGAC-------GCAAGAAGATGACGCTGTACCTCCACGACATCCTCTACAA
CGG---CGTCAACAACACCGCCAACGCGACCGCCGCGCCGGTCACCAAGCCGACGGACCTGAGCACGTCGCACTGGAGC-
--------------AACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTGACGGAGGGGACGGCGCTGCCG
GT---CGGGGA------CGAGGAGCCGGCG--GCGCGCGCGCAGGGCTTCTACTTCTACGACAAGGA---G---TCGTAC
AGCGGGTGGTTCTCCTTCTCACTCGTGTTCAACTCAAAGGCATACAGGGGCACGCTCAACCTCATGGGCGCCGATCCCAT
GGACGAGGAGACTCGTGACTTCTCCATCGTCGGCGGCACCGGCGACTTCTTCATGGCGCGCGGCATCGCGACTATCCGCA
CCGACGCCACCT-GGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAT--------
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>chr2D_1086
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-GCCGGAGGAGGCTCGTCTCCAGCAGCTCCGACGAGCCGTGCAAGCAGATGACGCTCTACCTCCACGACATCCTCTACAA
CGG---CGTCAACAACACTGCCAACGCGACGGCGGCGCCGGCCACCAAGCCGACGGACCTGAGCACGTCGCACTGGAGC-
--------------AACGGCACCTTCTTCGGCATGCTGGTGGTGTTCGACGACCTGGTCACGGAGGGGACGGCGCTGCCG
GT---GGGGGA------CGAGGAGCCGGCG--GCGCGCGCGCAGGGCTTCTACTTCTACGACAAGAA---GGAGTCGTAC
AACGCGTGGTTCACCTTCTCCCTCGTGTTCGACTCCAAGGCGTACAAGGGCACCCTCAACCTCATGGGCGCCGACCTCAT
GGACGACGAGACGCGCGACCTCTCCGTCGTGGGCGGCACCGGCGACTTCTTCATGGCGCGTGGCATCGCCACCATCCGCA
CCGACGCCACCGAGGGCTACTTCTACTTCCGCCTCAAGATGGACATCAAGCTCTACGAGTGCTACGTCTGAT--------
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-------------------------------------------------------------------
>chr6A_2069
CCCTCT--------------------------------------------------------------------------
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------------------------------------------------------------CACCCTCGCGCCGCCACCCC
CACGGGCGGCTCGGGT-GGCGCCACCGTGCCCCGCCTCTAACC------CCCTCCCCTCGCTCCTCCCCCCGCCGCCGCC
GGCCAAATCCGCTAGGGCAAAGCCCCTGCGGTGGCTGGTGGCGGGGGCTTCTTCCTCTTTCACTCGGATCTGGGCGACGC
GGGGTGGCCCGCCCGTC-GGAGGCGTCAGGCGCGCATGGGGCCTGGCGGCGCTATGGCGGTGGCTCCGGTCGGCGTCGTG
CCGCGGCTCAGCGGCGTCCTGGCGGCTGCAGCCCGCAATGCGGCGGCTGCATGCCCGTGGCTGCATCCTGGATCAGATCT
GGGCGTCGGTGGGCTGCGGGCGGCTCGGGGGGACCTCCATCGGTCTTCTCCAGCTCCGGTTGGTTCTCTGGGGGCGGATG
GTGGCGGC-GGAGCTGAGGCTTCGGGTGGTCGCGTGCCCGGCCTGGTCTCATGGCTGGATTCCGGCGGGCGGCGCGGGGT
GGGGCAGTGGCC-------------------------------------------------------
>chr6B_2077
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---------------------------------------------------------------CCCCGCGCAGCCACCCC
CGCGGGCGGCTCGGGT-GGCGCCGCCGTCCACCGCCTCTAACC------CCCTTCCCTCGCTCCTCCCCCCGCCGCCGCC
GGCCGGATCCGCCAGGGCAAAGCCCCTGCGGTGGCTGGCGGCGGGGACTTCTTCCTCCTCCGCTCGGATCTGGGCGACGC
GGGGTGGCCCGCCTGTTTGGGGGCGTCAGGCACGCGTGGGGCCTGGCGGTGCTGCGGCGGTGGCTCCGGTCGGCGTCGTG
CCGCGGCTCGGCGGCGTCCTGGCGGCTGCTGCCCGCAACGCGGCGGCTGCGTGCCCGTGGCCGCGTCCTGGATCAGATCT
GGGCGTCGGTGGGCTGCGGGCGGCTCGGGAGGACCTCCGTCGATCTTCTCCAGCTCTGGTTGGTTCTCTGGGGGCGGATG
GTGGCGGC-GGAGCAGTGGCTTCAGGTGGTCGCATGCCCGGCCTGGTCTCATGGCTGGAATCCGGCGTGAGGCACGGGGT
GGGGCAGTGGCC-------------------------------------------------------
>chr3B_2077
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---------------------------------------------------------------CCCCGCGCCGCCTCCCC
CGCGGGCGGCTCGGGCGGGCGCCGCCGTCCCCCGCCTCTAACCT-----CCCTTTCCTCGCTCCTCCCCCCGCCGCCGCC
GGCCGGATCCGCCAGGGCAAAGCCCCTGCGGTGGCTGGCGGTGGGGGCTTCTTCCTCCTCCGCTCGGATCTGGGCGACGC
GGGGTGGACCGCCCGTC-GGAGGCGTCAGGCGCGCGTGGGGCCTGGCGGCGCTGTGGCGGTGGCTCCGGTCGGCGTCGTG
CCGCGGCTCGGCGGCGTCCTGGCGGCTGCAGCTTGCAACGCGGCGGCTGCGTGCCCGTGGCCGCGTCCTGGGTCAGATCT
GGGCGTCGGTGGGCCGCGGGCGGCTCGGGAGGACCTCCGTCGATCTTCTCCAGCTCTGGTTGGTTCTCTGGGGGCGGATG
GTGGCGGC-GGAGCAGAGGCTTCGGGTGGTCGCGTGCCCGGCCTGGTCTCATGGCTGGATTCCGGCGGGCGGCGCGGGGT
GGGGTAGTAGCC-------------------------------------------------------
>chr7B_2077
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---------------------------------------------------------------CCCCGCGCCGCCTCCCC
CGCGGGCGGCTCGGGCGGGCGCCGCCGTTCCCCGCCTCTAACCT-----CCTTTCCCTCGCTCCTCCCCCCGCCGCTGCC
GACCGGATCCGCCAGGGCAAAGCCCCTGCGGTGGCTGGCGGCGGGGGCTTCTTCCTTCTCCGCTCGGATCTGGGCGACGC
GGGGTGGCCCGCCCGTC-GGAGGCGCCTGGCGCGCGTGGGGCCTGGCGGCGTTGTGGCGGTGGCTTCGGTCGGCGTCGTG
CCGCGGCTCGGCGGCGTCCTGGCGGCTGCAGCCCGCAACGCGGCGGCTGCGTGCCCGTGGCCGCGTCCTGGGAAAGATCT
GGGCGTCGGTGGGATGCGGGCGGCTTGGGAGGACCTTCGTCGGTCTTCTCCAGCTCTGGTTGATTCTCTGGGGGTGGATG
GTGGCGGC-GGAGCAGAGGCTTCGGGTGGTCGCGT-CCCGGCCTGGTCTCATGGCTGGATTCCAGCGGGCGGTGCGGGGT
GGGGTAGTGGCC-------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
-----S-------------------------------------S------------------------------------
----------------------------S------------S--------------------------S-----------
---------S-------S--------------------------------------------------------------
----------------------------S-----------------S------------------S--------------
----------------------------------S-S-------S-----------------------------------
----------------------------S---------------------------------------------------
----S------------------------------S---------------------------S----------------
--S--------------------S-----------------------------------------------S--------
-------------------------------------------------------------------S-SSSSSSSSSSS
SSSSS-----------------------S-------------------------S-------------------------
-------S-----------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------S-------------------------------------------------------------
----------------------------S-------------------------------------------SSSSSSSS
SSSSSSSSSSSS-----------------S------------SSS-----------------------------------
------------S-------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S---S------------------------------------------------
-----------------------------------S--------S----------------------------S------
-----------------------------S---------------------------------------S----------
----------------------------------------------------------------------------S---
---S-SS-S-S----------------------------------S----------------------------------
-------------------------------S-SSSS---------------------------------------S---
-------SS----------------------------------S------------------------------------
-------------------S------------SS-------S-------------------------
>forward_888
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TACGATTCTCAA
GGCACCCC------------------------------------------------------------------------
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>reverse_2604
--------------------------------------------------------------------------------
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-------------------------------------------GGGTCTCACGGATGGAATCC-----------------
-------------------------------------------------------------------
