>input_sequence_74227
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-----------------------------------------------------------ATGTCGCCCTCTTCCCCTACG
CAACACGCTCCAGGAACCACAGCGTCGTCGTCG---------TCATCGTGCTTCGCTCTAGCATGGCACGTGTGGAGCCT
ATGCGCGCTCCACATCGCCCTCGTCCTCTCCTCCGTGGCCGCGGCCGCCCTCATCGTCGTGCTGCTCCCCTTCGCCTGCG
CGGCCGCCTCCCTCTGCCTCGTCTGCGCGATCACGGCGCGGTTCCTCTCGTGCCCCGCCTCCTTTGCGCCACTGGATCGG
ACGGCGGCACAGAGCGCCGGCGCCGACGGTGACGCGTACTCATGGGAGGAGGAGGAGGAGCACGGCGGGGGAGCAGAGCT
AGAAACACGCAGCCGGGAGTGCACCGCTGCTTACATCGATGGAGCCCATGAGTCCATCGATCCTTACGCTGATGAGCAAG
ATCGTCGGTTTTTGTTGGCGGAAACTGGGAACTACTACTACTGCAAAAAAGTGAGTGAGCATTTCTTCTCTATCCATGCG
CTCTGTTTTCGGCTGTTGTTCGTG---CTATCGGCTTAGTTAACTGGACTGGACCGTGTGCATGCAGTTCTACGATCTCC
TGGCTTTCTGGAGACGCAAAGAGAGAGACTGGAGAGGG---TGA------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr5A_1_TraesCS5A01G251300
CCTGATAACTTGCATACAAATATCATGGTAACTTTCTCCTGAGAAGAAATCATGTGGTAGACGTGAAGAAGTGACAGTTT
TCTCGGGGGTGAGCGTCCGAGATGTGCGGGAGAAGCAGATTTCTCAGGCGAGCTTGCGGGGTCATTTGGGAAGAGGCGAG
GTCAAAGAACGAAGGGATCGTATAGTACTTTAAAATGAAAGAAATAGAGGTGTGGCAGTTTTGCTTATATGGCACACGTG
TGCCAAATATCACAGTCATTTTCCTTTTACCCTTTTCTTTTTCCTGTTTGTCCTTTTTCCTTTTTAATTTTTTACTTTGT
TTTGCTAACTTTTTTTTTCAAAAAAATCAATATTTTTTCCATCGAATTCATCTTTTT---ATCAATATTTAAAAAATGTT
CATCAAATTCAAAGTGTGTTCATGAAACTAAAAAATCTTTTATGTAACTCTACATTTTATTCATCTTTGTCAAAAAATGT
TCATCGATTTCTAAAAAATTTCATCAAATTCAAATTTTATTCGTCCATTTTTTTTAAAAGTTCATAGTGTTCAAAATTTG
GTCAGCGTAACTTTTTAAAATGGTCATCAAATTCAAAATATGTTCATTCATCTTTCAAAAAGTTCATCCTTATT------
------TTGTTGAATGGAGAATTTTTTTCATCAAGCTTAAAAAATGTTCATCAAATTCATGGCCCAAACGCCATCTTCCT
GCCAAGAAGTCCCGGCCA----TGACGGCCGACAGTTCTTATACGCTAAAAAGAATGACAGCCGGCAGTGGGCCCGCCAC
GTGGAGCCACTCCCTCTCGCGGAGCAATACACGTATTTCAGCTGTCTTCAATGCAAACCGCATCACTGAAGTTCTACATG
CCCGAACCTACACGCGTTGCACGCGAAGGATCGTTGCAGCAAAACTCCACGTAGCCAAGGTCGAAAGAGAAATCTTACTC
GTCCACAGGCCTCGCGGCAGTCGCATCAACTGGCGCCATCTTTCAGAGCCTCAAGTCCCATGTCGCCCTCTTCCCCTACG
CAACACGCTCCAGGAACCACAGCGTCGTCGTCG---------TCATCGTGCTTCGCTCTAGCATGGCACGTGTGGAGCCT
ATGCGCGCTCCACATCGCCCTCGTCCTCTCCTCCGTGGCCGCGGCCGCCCTCATCGTCGTGCTGCTCCCCTTCGCCTGCG
CGGCCGCCTCCCTCTGCCTCGTCTGCGCGATCACGGCGCGGTTCCTCTCGTGCCCCGCCTCCTTTGCGCCACTGGATCGG
ACGGCGGCACAGAGCGCCGGCGCCGACGGTGACGCGTACTCATGGGAGGAGGAGGAGGAGCACGGCGGGGGAGCAGAGCT
AGAAACACGCAGCCGGGAGTGCACCGCTGCTTACATCGATGGAGCCCATGAGTCCATCGATCCTTACGCTGATGAGCAAG
ATCGTCGGTTTTTGTTGGCGGAAACTGGGAACTACTACTACTGCAAAAAAGTGAGTGAGCATTTCTTCTCTATCCATGCG
CTCTGTTTTCGGCTGTTGTTCGTG---CTATCGGCTTAGTTAACTGGACTGGACCGTGTGCATGCAGTTCTACGATCTCC
TGGCTTTCTGGAGACGCAAAGAGAGAGACTGGAGAGGG---TGAACAGTACACACGATGGCACATACAGGTTCAGGCGCT
CAGGGTAGTGTGATTACGATGTGCTTATCCGCAAAGACTGCACTGGGCTGCAAGGTTCGATTGTTCTGGGCCACACGAAC
CTGAGAAAAACGGGGT--GTGTGGTTCTGCCCTGGTCCAGGCCCATTAGGGAACCGCTCTGATCTCTAGGTTTTTCTTGA
AATCACTAATT-AAGGAGTACTCATTGCAAAGAACACTCCACTTTCTCAAGTCGTGACAAGTGGCGTACATGCAGCACGT
CACTTGTCGCAACCTAGGAGTTTTTCTTTTTTCG--TAGATTTG-TTTATTCAAAATGTTTTATCTCTTAAACCGTGCGT
CCAAATCTCGAACCGTTTTCATCATTGAATTCCTCGCGTCGAGATCTTTAAAACTAGATCCCATGTTGATAGATTTTGAC
GAACTTTTTTCC-ACGAAAAAA-AACCGGACAAAAAGACCGGGCGAAAAAACAGAACCGGGATCACGG-TTTTTTCCTTT
TTCGAAAGAGGCACGTCCATGCCTCTCGCGAAATCACAACTGTGTCTCTCGTGAAAGTAAAACCGTGACTCGTAAAAGG-
----AAAAAAACAGAAAACATGTT--TTTC--TTTCGTTTCTGAGAGGCACGGCCGTGACTCTCGCGAAGGCACAACCGT
GCCTCTCGCGAAAGCAAAACCGTGACTCTCGCGAAAAG-AAAAAA--CAGAAAGCGCGTATTTTTTTCCCTTTCCTAGAG
GCATGGCCGTGAATTTCACGAAAGCACAACTGTGCCTCTCGCGAAAGCAAAACCGTGACTCCCACAAAAG-AAAAAAAAA
--GAAAACGCATTTTGTTTTTCCCTTTTCTAGAGACACGGTCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCATGACTTTCATGAAAGAA--AAAAAAACAGAATACGCGTTT-TGTTTTTTCCTTTTTCGAGTGGCACGGCCG
TGACTCTCGCAAAAGCACAACCGTGCCTCTC
>chr5B_349
AATATTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTTATATCGAATTCATTTTTTGTTGATCAAGATTTAAAAAATGTT
AACCATATTCAAAGTTTGTTCATGACACTAAAAAATGGTTTATGAAACTCGAAATTTG-TTCATCTTTTTCAAAAAATGT
TCATCGATTTCTTAAAAAAAT-ATCAAATTCAAATTTTATTCATCCATTTTTTTAAATGTTTATC-GTGTTCAATATTTG
GTTAGCATAACGTTTTAAAATGTTCATCAAATTCAAAATGTTTTCATTCATCTTTCAAAAAGTTCATATGATTTTGTAAA
AAAAAATTGTTGAATGAAGAATTTTTCA-ATCAAGTTTAAAAAATGTTCATCTAATTCATGGCCCAAACGCCATCTTCCT
GCCAAGAAGTCCCGCCCA----TGACGGCCGACAGTTTTTATACGCTAAAGA-AATGACAGCCGACAGTGG--CCGCCAC
GTGGAGCCTCTCCCTCTCGCGGAGCAATACACGTATTTCAGTTGTCTTTAATGCAAACTGCACCACTCCAGTTCTACGTA
CCCGAACCTACACGTGTTGCGCGCGAAGGATCGTTGCAGCAAAACTCGACGCAACCAAAGTCCAAAGAGAAATCTTGCTC
GTCCATAGGCCTCGCGGCAGTCGCATCAACTGGTGCCATCTTTCAGAGTCTGAAGCCCCATGTCGCCTTCTTCCCCTACG
CTAGACGCTCCGGGAACCACAGCGTCGTCGTCGTCGTCGTCATCATCGTGCTTCGCTCTAGCATGGCACATGTGGAGCCT
ATGCGCGCTCCACGTCGCCCTCGTCCTCTCCTCCGTGGCCGCCGCCGCCCTCATCGTCGTGCTCCTCCCCTTCGCCTGCA
CGGCCGCCTCCCTCTGCCTCGTCTGCGCGATCGCGGCGCGGCTTCTCTCGTGCTCCGCCTCCTTCGCAACGCTGGATCGG
ACGGCGGCACAGAGCGACGGCGCCGACGGTGACGCGTACCCGTATGAA---GAGGAGGAGGATGGCGGGGGAGCAGAGCT
GGAAACACGCGGCCGAGAGTGCACGGCTGCTTACATCGATGGAGCCCATGAGTCCATCGATCCATACGGTGATGAGCAAG
ATCGTCGGTTCGTGTTGGCGGAAACTGGGAACTACTACTACTGCAGAAAAGTGAGTGAGCATTTCTTCTCTTCCCCTGCA
CTCTGTTTTCGTCAGTGGTTCGTG---CTATCGGCTTAGTTAACTGGACTCGACCGTGTGCATGCAGTTCTATGATCTCC
TGGCTTTCTGGAGACGCAAGGAGAGAGACTGGAGAAGGGGGTGAACAGTA------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr5D_677
CAAACTG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------CATGGCCCAATCGCTATCTTCCT
GCCAAGAAGTCCCGCCCATGACTGACGGCCGACAGTTCTTATACGCTAAAAA-AATGACAGCCGACAGTGGCCCCGCCAC
GTGGAGCCACTCCCTCTTGCGGAGCAATACACGTATTTCAGTTGTCTTTAATTCGAACTGCGTCACTGCAGTTCTACGTA
CCCGAACCTACACGTGTTGCGCGCGAAGGATCGTTGCAGCAAAACTCCACGCAACCAAAGTCCGAAGAGAAATCTTACTC
GTCCATAGGCCTCGCGGCAGTCGCATCAACTGGGG-CATCTTTCAGAGTCTGAAGTCCCATGTCGCCCTCTTCCCCTACG
CTAGACGCTCCGGGAACCGCAGCGGCGTCGTCGTCG------TCGTCGTGCTTCGCTCTAGCATGGCACGTATGGAGCGT
ATGCGCGCTCCACGTCGCGCTCGTCCTCTCCTCCGTGGCCGCCGCCGCCCTCATCGTCGTGCTCCTCCCCTTCGCCTGCA
CGGCCGCCTCCCTCTGGCTCGTCTGCGCGATCGCGGCGCGGTTCCTCTCGTGCTCCGCCTCCTTCGCGCCGCTGGATTGG
ACGGC---ACAGCACGCCGACGGCGAC---GACGCGTACTCGTGTGAAGAGGGGGAGGAGCAAGGCGGGGGAGCGGAGCT
GGAAACACGCGGCCGAGAGTGCGCCGCTGCTTACATCGATGGAGCCCACGAGTCCATCGATCCTTACATTGATGAGCAAG
ATCGTCGGTTTCTGTTGGTGGACACTGGGAACTACTACTACTGCAAAAAGGTGAGCGAGCATTTCTTATCGATCCCTGCA
ATCTGTTTTCGGCTGTTGTTCGTAGTACTATTGGCTTAGTT-ACTGGACTGGACCGTGTGCATGCAGTTCTACGATCTCC
TGGCTTTCTGGAGACGCAAAGAGAGAGACTGGAGAAGG---TGAACAGTACACGCGATGGCACATACAGGTTCAGGCGCC
CAGGGTAGTGTGATTACGATGTGCTTATCTGCAAAGACTGCAATGGGCTGCAAGGTCCGATTGTTCTGGTGCAGACTGCA
AGCAAGGTCCGGTTGTGGGTGTGCTTCTGCCCGGGTCCAGGCCCATTTGGGAACCGCTCTGATCTCTAGTTTT-------
--------------------------------------------------------------------------------
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-------------------------------
>chr5A_1793
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GGTTCTTCCCGA
AATCACTAATT-AAGGAGTACTCGTTGCAAAGAACACTCCACTTTCCCAGGTCGCGACAAGTGGCGCACATGCAGCGCGC
CACTTGTCGCAACCTGGGAGTTTTCCCTTTTTT-CGTAGATCCG-TTTATTCAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATCTTGAACTGTTTTCACCTTTGGATTTCTCACGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGAT
GAACTTTTTTTT-CACGAAAAAAATCGGACGAAAAAAACCGGGCGAAAAAACCGAACCGGGAGCATGG-TTTTTTTCCTT
TCCGAAAGAGGCACGTCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGGAAGCAAAACCGTGACTCTCGTGGAAG
GA--AAAAAAACAGAAAACACGTT--TTTT--TTTCGTTTCCGAGAAGCACGGCCGTGACTCTCGCGAAAGCACAACCAT
GCCTCTCGCGAAAGCAAAACCGTGACTCCCGCGAAAGAAAAAAAA--CAGAAAACACGTAT-TTTTTCCCTTTCTAATAG
GCACGGCCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTACCGAAAG-AAAAAAAAA
CAGAAAACACGTTTTGTTTTTCCCTTTCTGAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACTGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCGCGAAAGAA--AAAAAA-CAGAAAACGCA-TT-TTTTTCG----TTTCCGAAAGGCACGGCCG
TGACTCTCGCTAAAGCACAACCGTGCCTCTC
>chr1D_1802
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------TGA
AATCACTAATT-AAGGAGTACTCGTTGCAAAGAACACTTCACTTTCCAAGGTCGTGACAAATGGCGCACATGCAGCGCGC
CACTTGTCGCAACCTGGGAGTTTTTCCTTTTTT-CGTAGATTCA-TTTATTCAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATCTCGAACCGTTTTCACTATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGAC
GAACTTTTCTTTTCAC-AAAAAAACCGGATGAAAAATACCGGGCGAAAAACCCGAACCGGGAGCACGG-TTTTTTTCCTT
TTCGAAAGAGGCACGCCCATGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGGAAGCAAAACCGTGACTCTCGTGGAAG
GA--AAAAAAC---AGAAAACGCC--TTTT--TTCCGTTTCCGAGAGGCACGACCGTG-CTCTCGCGAAAGCACAACCGT
GCCTCTCGCGAAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAA--CAGAAAACGCGTATTTTTTTCCCTTTCCGAGAG
GCACGACCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGAAAGCAAAACCGTGACTCTCATGAAAG-AAAAAAAAA
CAGAAAACGTGTTTTGTTTTTCCCTTTCCGAGAGGCACGGCCGTGACTCTCGCAAAAGCACAACCGTGCCTCTCGTGGAA
ACAAAACCGTGACTCTCGCGAAAGAA--AAAAAAACAGAAAACGCGTTT-TTTTTCG----TTTCCGAAAGGCACGGCCG
TGACTCTCGCGGAAGAAAAACCGTGACTTTC
>chr5A_1803
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATCACTAATT-AAGGAGTACTCGTTGCAAAGAACACTCCACTTTCCCAGGTCGCGACAAATGGCGCACATGCAGCACAC
CACTTGCCGCAACCTGGGAGTTTTCCCTTTTTT-CGTAGATCCG-TTTATTTAAAACGTTTTATCTCTTAAACCATGCGT
CCAAATCTCGAACCGTTTTCACCATTGGATTCCTCGCGTCGATATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGAC
GAACTTTTTTTT-CACGAAAAAAACTGAACGAAAAAAACCGAGCGAATAAACCAAACCGGGAGCACGATTTTTTTTCGTT
TTCGAAAAAGGCACGCCCGTGCCTCTCACAAAATCACAACCGTGCCTCTCGTGAAAGCAAAATTGTGACTCTCATGGAAG
GA--AAAAA-C---AGAAAACACG--TTTT--TTTCGTTTCCGAGAGGCACGGCCGTGACTCTCGCGAAGGCACAGCCGT
GCCTCTTGCAAAAGCAAAACTGTGACTCTCGCGAAATAAAAAAA---CAGAAAACACGTATTTTTTCCCCTTTCCTAGAG
GCACAGCCATGACTTTCGCGAAAGCACAACCGTACCTCTCGCGGAAGCAAAACCGTGACTCTCATGAAAG-AAAAAAA--
CAGATAACGCGTTTTGTTTTTCCCTTTCCTAGAGGCATGTTCGTGACTTTCGCAAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCACGAAAGAA--AAAAAAACAGAAAACGCGTTT-TGTTTTTCCCTTTTCTGAGAGGCACGGCCG
TGACACTCGCAAAAGCACAACCGTGCCTCTC
>chr1A_1803
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATCACTAATT-AAGGAGTACTCGTTGCAAAGAACACTCTACTTTCTCAGGTCGCGACAAATGGCGTACATGCAGTGCGC
CACTTGTCGCAACATAGGAGTTTTTCTTTTTTCG--TAGATTCA-TTTATTTAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATTTTAAACCGTTTTCATCATTGAATTTCTCACGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGAC
-AAATTTTTTTT-CACGAAAAAATTCGGACGAAAATAACAGGGCGAAAAAACCGAACCAGGAGCACGA-TTTTTTCCCTT
TCCGAAAGAGGCACACCCGTGCCTCTCGCGAAATCACAATCGTGCCTCTCGTGAAAGCAAAACCGTGACTCTCGTGGAAG
GA--AAAAAAT---AGAAAACACGT-TTTT--TTTCGTTTCTGAGAGGCACGGCCGTGACTCTCGCGAAGGCACAACCGT
GCCTCTCGCGAAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAAAACAAAAAACGCATATTTTTTTTTCTTTCCTAGAG
GCACGGCCGTGACTTTCGCGAAAGCACAACCGTGTCTTTCGCAGAAGCAAAACCGTGACTCTCACGAAAG-AAAAAAA-A
-AGAAAACACGTTTTGTTTTTCCCTTTCCTAAAGGCACGGTCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCACGAAA--------AAAACAGAAAACACGTTT-TGTTTTTCCCTTTTCCGAGAGGCACGGCCG
TGACTCTCGCAAAAGCACAACCGTGCCTCTC
>chr4A_1803
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATCACTAATT-AAGGAGTACTCATTGCAAAGAACACTCCACTTTCCCAGGTCGCGACAAGTGGCGCACATGTAGCGCGC
CACTTGTCGCAACCAGGGAGTTTTCCTTTTTTT-CATAGATTCG-TTTATTCAAAACGTTTTATCTCTTAAACCGTGCAT
CCAAATCTCGAACCGTTTTCACCACTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCTCATGTTGATAGGTTTTGAC
GAACTTTTTTTT-AACGAAAAA-ATCAGACGAAAAAAACCGGGTGAAAAAACCGAACAGGGAGCACGG-TTTTTTCCCTT
TCCAAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGAAAACAAAACCGTGACTCTCGTGGAAG
AAGAAAAAA-C---AGAAAACATG--TTTT--TTTCGTTTCCGAGAGGCACGACCGTGACTCTCGCGAAGGCACAACCGT
GCCTCTCGCGAAAGCAAAACCGTGACTCTCGGGAAAGAAAAAAAG--CAGAAAACACGTA--TTTTTCCCTTTCCTAGAG
GCACGGCCGTGACTTTCACGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAA----AAAAA-C
-AGAAAATGTGTTTTGTTTTTCCCTTTCCTAGAGGCACGGTCGTGACTTTCACGAAAGCACAACCGTGCCTCTCACAGAA
GCAAAACCGTGACTCTCACGAAAGAA--AAAAAA-CAGAAAACACGTTT-TGTTTTTCCCTTTTCCGAGAGGCACGGCCG
TGACTCTTGCAAAAGCACAACCGTGCCTCTC
>chr2D_1803
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATCACTAATT-AAGGAGTACTCATTGCAAAAAACACTTCACTTTCTCATGTCGCGAGAAGTGGCGCACATGCAGCGCGC
CACTTGTCGCAACCTGGGAGTTTTCCCTTTTCT-CGTAGATCCG-TTTATTCAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATCTCGAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTTAAAACTAGATCCCATGTTGATAGGTTTTGAC
GAACTTTTTTTC-CACGAAAAA-AACCGGCCGAAAAAACCGGGTAAAAAAACCGAACCGGGAGCATGGGTTTTTTCCCTT
TCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGGAAGCAAAACCGTGACTCTCGTGGAAG
AA--AAAAAAC---AGAAAACGCGTTTTTT--TTTCGTTTCCGAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGT
GCCTCTCGCGAAAGCAAAACCGTAACTCTCGCGGAAGAAAAAAAA--CAAAAAACACGTA-TTTTTTCCCTTTTCGAGAG
GCACGGCCGTGACTTTCGCGTAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAG-AAAAAAG-A
CAGAAAACGCGTTTTGTTTTTCCCTTTCCGAGAGGCATGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCGCGAAAGAA--AAAAAAACAGAAAACGCGTTT-TTTTTCG----TTTCTGAAAGGCACGGCCG
TGACTCTCGATAAAGCACAACCATGCCTCT-
>chr3D_1803
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATCACTAATT-AAGGAGTACTCGATGCAAAGAACACTCCACTTTCCTAGGTCGCGACAAGTGGCGCACATGCAGCGCGC
CACTTGTCGTAACCTGGGAGTTTTCCCTTTTTT-CGTAGATCCGTTTTATTCAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATCTTGAACCGTTTTCACCATTGGATTCTTCGCGTCGAGATCTTCAAAAATAGATCCCATGTTGATAGGTTCTGAC
GAACTTTTTTTT-CACGAAAAA-AACGGACGAAAAAACCGGGGCGAAAAAACTGAACCGAGAGCACGGTTTTTTTCCTTT
TCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGGAAGCAAAATCTTGACTCCCGTGGAAG
GA--AAAAAAC---AGAAAACGCGT-TTTT--TTTCGTTTCCGAGAGGCATGGCCGTGACTCTCGCGAAAGTACAACCGT
GCCTCCTGCGAAAGCAAAACCGTGACTCTCACGAAAGAAAAAAA---CAGAAAACGCGTATTTTTTTCCCTTTCCGAGAG
GCACGGCCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAT-CGTGACTCTCACGAAAGAAAAAACA-A
CAGAAAACGTGTTTTGTTTTTCCCTTTCCGAGAGGCACGGTCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCGCGAAAGAA--AAAAAA-CAGAAAACGCGTTT-TTTTTCG----TTTTCGAAAGGCACGGCCG
TGACTCTCGCTAAAGCACAACCGTGCCTCTC
>chr3D_1807
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--TCACTAATTAAAGTAGTACTCTTTGCAAAGAACACTTTATTTTTCCAGGTCGCGACAGGTGGCGCACATGCAGCGCGC
CACTTGTCGCAACCTGGGAGTTTTCCTTTTTTTT--AAGATCCG-TTTATTCAAAACGTTTTATCTCTTAAACCGTGCGT
CCAAATCTCGAACCATTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGAT
GAACTTTTTTTCTCACGAAAAA-AACCGGACGAAAAAACCGTGCAAAAAACACGAACCGGAAGTAC-GGTTTTTTCCCTT
TCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCTCTCGTGGAAGCAAAACCGTGACTCTCGTGGAAG
GA--AAAAAAC---AGAAAACACGT-TTTTTATTTCGTTTCCGAGAGGCACGGGCGTGACTCTCGCGAAAGCACAACCGT
GCCTTTCGCGAAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAA--CAGAAAACGCGTA-TTTTTTTCCTTTCCTAGAG
GCACGGTCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAG-AAAAAAA-A
CAGAAAACGCGTTTTGTTTTTCCCTTTCCGAGAGGCACGGCCGTGACTTTCGCGAAAGCACAACCGTGCCTCTCGCGGAA
GCAAAACCGTGACTCTCGCGCAAGAAGGAAAAAA-CAGAAAACGCGTTTGTTTTTCG----TTTCCGAAAGGCACGGCCG
TGACTCTCGCTAAAGCACAACCGTGCCTCTC
>chr3A_1813
--------------------------------------------------------------------------------
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--------ATT-AAGGAGTACTTGTTGCAAAGAACATTCCACTTTCACAGGTCGTGACAAGTGGCGCACATGCAGCGCGC
CACTTGTCGCGACCTGGGAGTTTTCCCTTTTTTTCGTAGATTTG-TTTATTCAAAACGTGTTATCTCTTAAACCGTGCGT
CTAAATCTCGAACCGTTTTCACCATTGGATTCCTCACGTCGAGATCTTCAAAACTAGATCCCATATTGATAGGTTTTGAC
GAA--TTTTTTTTCACGAAAAA-AACCGGACAAAAAAACCGGGCGAAAAAACCGAACCGGGAGCACGGTTTTTTTCCCTT
TCCGAAAGAGGCATGCCCGTGCCTCTCGCGAAATCACAACCGTACCTCTCGTGAAAGCAAAACCGTGACTCTCGTGGAAG
GA--AAAAA-C---AGAAAACACGT-TTTTTTTTTCGTTTCCAAGAGGCACGGCCGTGACTCTCGCGAAGGCACAACCGT
GCCTCTTGTGAAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAA---CAGAAAACACGTATTTTTTTCCCTTTCCTAGAG
GCACGGCCGTGACTTTCACGAAAGTACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCCCACGAAAGAAAAAAAA-A
CAGAAAACGCGTTTTGTTTTTCCCTTTCCTAGAGGCACGGTCATGACTTTCGCGAAAGCACAACCGTGCGTCTCGCGGAA
GCAAAACCGTGACTCTCACGAAAGAA--AAAA-A-CAGAATACGCGTTT-TGTTTTTCCTTTTTCCGAGAGGCATGGCCG
TGACTCTCGCAAAAGCACAACCGTGCCTCTC
>SNPs
-S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS-----------S----S--------S--------------
S-S--S---------S---------S----------SS------S-----S-S----SS---------S-----------
------------S-----SS-S--------------------S-----------S--SSS--SSSS--------S-----
--S---S----S----------S----------------S-S-------------------------SSSSS--------
----------------S---------SSS------S----------------S---------------------------
--------------S-------------------------------------S-----------S------S--------
-----------------------------------------S------S---------S---------S--------S-S
--------------S-----S------------------------------S-S----S---S-----------------
-----S---------------------------S--------------S--S----------------------------
-S-S-------S--------------------------------------------------------------------
-------------S----------------------------S--------------------S---------------S
--------------------------------S--------------------S----------S-----S---------
-----------------------------------------S--S--S--------------S-----------------
S---------S----S----------------------------------------------------S-----------
-----------S---------------------------------------------------------------S---S
--------------------------------------------------------------------------------
-----------------------------------S-----------------S-------------------------S
-----------------------------S------------S-------------S------------SS--S--SSSS
SSS-SSSSSSS-SS---------S--------S--------------S----------------------------S---
-------------------------------------------------S-----------------------------S
--------------------------------------------------------S-----------------------
------------------------------------------------------------------------S-------
----------S---SSS-------------------S---------------S---------S-----------------
----------------------------------------S---S------------S-------------SS-SSSSS-
--------------------S--------S--------------------------------------------------
------------------------------------SS---------------S--------------------------
---S--------S-----------------S----------------------------------S--------------
----------S----------------S------S---------------------------------------------
--------S-----S---S--------------------------------------S-----------S----------
-------------------------------
>forward_162
--------------------------------------------------------------------------------
--------------------------------------------------------------CATTTGGGAAGAGGCGAG
GT------------------------------------------------------------------------------
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-------------------------------
>reverse_1808
--------------------------------------------------------------------------------
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-----------------------------------------------AGGGAACCGCTCTGATCTCT-------------
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-------------------------------
