>input_sequence_74180
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-------------------------------ATGTGGCCGCTACCCCCGAGTAGAGGAGGCGGAGCGAACATGTCGTCGC
TACCGAGCCACATCTTCCTCCTCACCGCCGCCGCCCTCTTATTCCTGCCGCCCCCGGCGATGTCCTCCACCGGCGCCATC
ATCCGGCTCCCTTACGGCGACGACATCATCGCCGAGACCTGCCAGAGATGCGGCGAGAACAACCACAACGTGGACTACGC
CCTTTGCGTCGCCTCCCTCTCAGCCGACCCCACCGGCCGCGACGCCGACCTCCACGGGCTCGCGCTCATCTCGGCCAAGC
TGGTGCGGGCGGGGGTGGCGGGCATGGACTCCGGCATGGCAGCGCTCCGGGGCAAGGAGGCAACGAGGTCGACAAGGTGG
TCCTGCCTCAACGCCTGCATAGACGTGTTCCGGGACGCCATGGTCGACCTCGACGACGCCATCGCCGCCATCGAGGATGG
AAGTTATTCTGACGCCAAGATGAAGATGGCCGCCACCACCGACGCGCCAGTGACCTGCAACGACGAGTTCAAGGAGCAGG
GATTGCAGCCGCCCATGGAAGGGGAGGGCCGGCGCCTGTTCCAGCACGCCGTCATCTCCCTCGCCATCATCTCATTAATC
TGA-----------------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G013500
CTCCGCGGGGATCCACGGGCTGGCGGTGCTGGCCACGCGGATCGCCGTCGACCACGCCGCCAGCACGGAGGCCAAGATCG
AGGACCTGGCGGAGCTCGAGGCGGAGG---CCGAGGGCGCCGCCTCGCGCGCGCGGTTCGAGCACTGCCTGGAGCAGTAC
GGCGGCGCCGCCGACCTGCTCCGCGACGCGCTGGACAACCTGCAGGCCAACGTGTACGGGCTGGCCATGCAGCAGCTGAT
GGCGGCGCTGGGCGCGTCCCGGAGCTGCGAGGACGCCTGGAGGGGCGCCCCGGCCCGCGCCGTCCCCGTCGCCGCCCACG
ACCGCGAGTACGAGCGCCTCGCCCACATCGCCATCGGCTTCACCCACGCCGCCGCCAAATGATCCATCATGCATCGTCGC
CGCCGCCATGGATCAGATCAGATCATCGTCGTCGTCTTCTTCTTTGCATGGATCGGATTGGATTGG--ATTTCCTCGTCA
GCATCATCCATCGTTCATTATTGATTGATTATTACCATTAATTATTACATATAATCAGGTGTAGTAGTTGGAACCCCATC
TTCTTCTTCTTCTTCTTCTTTTTTTTACGTTTTCGATCGATTGTCCATAAAAGCGAATATTGTAGGCCATGATTTACTGA
TCACCATCAAATAATAAATAAAGCAATGATAATAACAAGATGAATTCACTCATCACATCTGTTTTC--TTTCTGTCTGTA
CAAAGATGAATTTGTGTACTGTGTATCTAATT--------TAAT------------------------------------
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-----------------------GGGGATTTTTTACTACTACTACTACTACTGA--------------------------
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---------TCTAGAAACAAATCGATCCCGGCA--------GAGATTCAGATGATTTTGCCCTGAGAATCTCTGAATTTG
ACAGGAAGAGTAGCTTAACGGACTAGCCTTCGGTTTCAGTTGCAAGCCACAGCCTAAAACCTGCAACTCCGTCTTCCTCA
CACGCTTCACCAACCAGCCACACCCATTTCCTCCTTCAACCTA----------------------------------TAT
CTTCCTCTCACTATATGTATAGCAGAAAACAATGTGGCCGCTACCCCCGAGTAGAGGAGGCGGAGCGAACATGTCGTCGC
TACCGAGCCACATCTTCCTCCTCACCGCCGCCGCCCTCTTATTCCTGCCGCCCCCGGCGATGTCCTCCACCGGCGCCATC
ATCCGGCTCCCTTACGGCGACGACATCATCGCCGAGACCTGCCAGAGATGCGGCGAGAACAACCACAACGTGGACTACGC
CCTTTGCGTCGCCTCCCTCTCAGCCGACCCCACCGGCCGCGACGCCGACCTCCACGGGCTCGCGCTCATCTCGGCCAAGC
TGGTGCGGGCGGGGGTGGCGGGCATGGACTCCGGCATGGCAGCGCTCCGGGGCAAGGAGGCAACGAGGTCGACAAGGTGG
TCCTGCCTCAACGCCTGCATAGACGTGTTCCGGGACGCCATGGTCGACCTCGACGACGCCATCGCCGCCATCGAGGATGG
AAGTTATTCTGACGCCAAGATGAAGATGGCCGCCACCACCGACGCGCCAGTGACCTGCAACGACGAGTTCAAGGAGCAGG
GATTGCAGCCGCCCATGGAAGGGGAGGGCCGGCGCCTGTTCCAGCACGCCGTCATCTCCCTCGCCATCATCTCATTAATC
TGAACAACAGATTATATATATTGAGCAAACGTCACCAGTATATATTGCTCTATTCGGCATACATCGCTATATTCATCAAG
TATGTAATGATATGACTCTTTTATCATCTAGTGCTCCATGTTGCAATCGACAGAGGAAGCATGCAGTATGTATACACATA
TCAAGATACCTGGTTACAGTCGTGGAAACGAACGTGCCAATGTAGCTGGCATGTTACTTAATCTTTGTATCA----AGCT
ACAGAACTAGTTTCGCATCTCAAATATATACACCA-AAAAATGCCGAGAGCTCTTGGATAAACTTTTTTACACACATTCA
GCCTTCAGGAATCATGCCGGACCGGTTCGCCTCAGACGCTCCAATCACCCTTCGAGATCAACGGCCCACAA-TCGTGTTA
CAAGTCATTCTTTGGTTAATTTCAGGCGTGGCACAATGTTCATCGACTGCAGTTCCTGAAAAAGATGGCCAGGCGACACA
ATGAGAGTTCGTTCACCATACACGACAGGGTTCAAGCGTC--------------CTAGAAATAATGTTTCAGAATCTAAT
AAGGTTTCAGAACTACTTTGTTTG------------------------GGTATGTATGGGCAACGAAAATTTCTGCAGGT
TGATTTACAAATAAGGTTTTTCAGAGGTGCACAAGCAACTTGAAAGGAAATGAGGATTATCGGAGCAACAAAAAATTAGG
CAAACGGACCGGCGTCATGACCTTAACTTAACTAGGAGAGGGTAAGCAAAATCCCAAGAAAACAATTAATAATGGTCACG
AAAAGAACCATTCTCGCTTCCCCCTTCTGCGGTACCTGAAACAAAAGCTTGCAGGCATATGGCATCGTCACTTGGGCCAT
GTTTTCCCCATTTTTGCAGAATGAACAGAAGGATGTCTTGAGTTTATGGTTGTAGTAGCCCAACAAACCGCATGTTCCGC
AAACCTGGAGAACGTGAGCAGCCACAAATAAGACCGTCGACAATCTTTCAGAGTTCTGGGATGCAACTACTCTTTGCTTT
TGATGCC
>chr6D_1
CTCCGCCGGGATCCACGGCCTGGCGGTGCTGGCCACGAGGATCGCCGTCGACCACGCCGCCAGCACGGAGGCCAAGATCG
AGGACCTGGCGGAGCTCGAGGCCGAGG---GCGCCGAC---------CGCGCCCGGTTCGACCACTGCCTGGAGCAGTAC
GGCGGCGCCGCCGACCTGCTCCGCGACGCGCTGGACAACCTGCAGGCCAAAGTGTACGGCCTCGCCATGCAGCAGCTCAT
GGCGGCGCTGGGCGCGTCCCGGAGCTGCGAGGACGCCTGGAGGGGCGCCCCGCCGCGCGCCATCCCCGTCGCCGCCCACG
ACCGCGAGTACGAGCGCCTCGCCCACATCGCCATCGGCTTCACCCACGCCGCCGCCAAATGA----TCATGCGTCGTCGC
CTCGCCTCCATG---GATCAGATCATCGTCGCCGTCTTCTTCTTGCAT------GGATCACCATCAATATTTCCTCGTCA
CCATCACTCATCGTTCATTATTGATG----ATTACCATTGTTATATATGATTAATCAGGTGT---AGTTGGGACCCCATT
TTCTTTTTCTTCTCTTTTTTTTTACGTTT-------TCGATTGTCCATAAAAGCGAATATTGTAGACCATGATTTACTGA
TCGCCATCAGATAATAAATAAAGCAATGATAATAACAAGATGAATTCACTCATCACATCTGTTTTTTTTTTCTGTATGTA
CAAAGAAAAATTTGTATACTGTGTATCTCATATTCTCATGTAAT------------------------------------
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-----------------------GGGGATC-TTTTTTATTATCACTTCTGATTTGATTGGTGAAACCAGAATTAATGTGT
GTGGGCAATGACACACAACCAGGTATGCAAATCATAGTTCTTTGCAGGGAAATTTCCCGATGATTTAGTTCGTCGAAAAA
ATCCTGACAGAAATCATC--ATCGATCCCTCCATTGGACGTGAGATTCAGATGATTT-GCCCTGAGAATCTCTGAATTTG
ACAGCAAGAGTAGCATAACGGACTAGCCTTCGGTTTCAGTTGCAAGCCACAGCCTCAAACCTGCAACTCCATCTTCCTCA
CACGCTTCACCAACCAGCCACACCCATTTCCTCCTTCAACCTA----------------------------------TCT
CTTGCTCTCACTATATGTATAGCAGAAAACAATGTGGCCGCTACCCCCGAGTAGAGGAGGCGAAGCGAAGATGCCATCGC
TGCCTAGCTACATCTTCCTCCTCACCTCTGTCACCCTCTTCCTTCTGCCCCAACCGGCGATGTCCTCCACCGACGCCATC
ATCCGGCTCCCTTATGGCGACGATATCATCGCCGAGACCTGCCAGAGATGTGGCGAGAACAACCAGAACGTCGACTACGC
CCTCTGCGTCGCCTCCCTCTCGGCCGACCCCTCAAGCCACGACGCCAGCCTCCACGGGCTCGCCCTCATCTCCGCCAAGC
TGGTGCAGGCCGGGGTGGCAGGCATGGACTCCGGAATGGCAGCGCTCCAGGGCAAGGAGACAACGAGGTCGACAAGGTGG
TCCTGCCTCAACGCCTGCATCGACGTGTTCCGCGACGCCATGGCCGACCTCGACGACTCCATCGCCGCCATCGAGGACGG
GAGGTACGCCGATGCCGAGACGAAGATGACCGCCACCACCGACGCACCGGTTACCTGCAACGACGAGTTCAAGGAGCAGG
GATTGCAGCCGCCCATGGAAGGGGAGAGTCGGCGCCTGTTCCAGCACGGCGTCATCTCCCTCGCCATCATCTCATTACTC
TGAATAACAGATTATAT----TGAGCAAATGTCACTAGCATATATTGCTCTATTCGGCATACGTTGCTCTAT---AAAAG
TATGTA---ATATGACTCTTTTATCATCTA---CTCCATGTTGCAAGCGACAG---------GCAGTATGTATACACATA
TCAAGATACCTG-TTACAGTCGTGGAAACGAAGGTGCCAATGTAACTGACATGTTACTTATTCTTCATATCAAGACAGCT
ACAGAACTAATTTCGCATCTCAAATATATACAACA-AAGAATGCCAAGAGCTATCGTGTAAACTTTTTTATACACATTCA
GCCTTCAGGAATCATGGCGGACCGGTTCACCTCATACACTCCAATCACCCTTCGAGATCAACGGTCCACAA-TCGTGTTA
CGAGTCATTCTTTGGTTAATTTCAGGCGTGGTACAACGTTCATCGATTGCAGTTCCTGAAAAAGATGGCCAGACGACACA
ATGAGACAGGGTTCAACATATACGACAGGATTCAAGCATGCAGCAGCACTGGTTCTAGAGATAAT---------------
---GTTTCAGAACTACTTTGTTTG------------------------GGTATGTATGGGCAACGAAAATTTCTGCAGGT
AGATTTATAAATAAGGTTTCTCAGAGATGCACTAGCAACTTGAAAGGATATGAGGATTATCTGAGCAAC-AAAAATTAGG
CAAACGGTCCGGCTTCATGCCCTC-----AACTAGGAGAGGGTAAGTAAAATCCCAAGAAAACAATTAATAATGGTCATG
AAAAGAACCATTCTCGCTTCCCCCTTCTGCAGTACCTGAAACAAAAGCTTGCAGGCATATGGCATCGTCACTTGGGCCAT
ATTTTCCCCATTTTTGCAGAATGAACAGAAGGATGTCTTGAGTTTATGGTTGTAGTAGCCTAACAAACCGCATGTTCCGC
AAACCTGGAGAACATGAGCAGCCACAAATAAGACAGTCGACAATCTTTCAGAGTTCTCGGATGCAACTATTCTTTGCTTT
TGATGCC
>chr6A_2
-TCCGCCGGGATCCACGGCCTGGCGGTGCTGGCCACGAGGATCGCCGTGGACCACGCCGCCAGCACGGAGGCCAAGATCG
AGGACCTGGCGGAGCTCGAGGCCGAGGCCGGCGCCGAC---------CGCGCCCGGTTCGACCACTGCCTGGAGCAGTAC
GGCGGCGCCGCCGACCTGCTCCGCGACGCGCTGGACAACCTGCAGGCCAACGTGTACGGCCTGGCCATGCAGCAGCTCAT
GGCGGCGCTGGGCGCGTCCCGGAGCTGCGAGGACGCCTGGAGGGGCGCCCCCGCGCGCGCCGTCCCCGTCGCCGCCCACG
ACCGCGAGTACGAGCGCCTCGCCCACATCGCCATCGGCTTCACCCACGCCGCCGCCAAATGA----TCATGCATCGTCGC
CTCGCCTCCATG---GATCGGATCGTCGTCGTCGTCTTCTTCTTGCAT------GGATTGGATTGG--ATTTCATCGTCA
CCATCACTCATCGTTCAATATTGAT----TATTACCATTATTAATTACATATAATCAGGTGT---AGTTG-AACCCCATT
TTCTTTTTCTTCTCTTCACATC---------TTCGATCGATTGTCCATAAAAGCAAATATTGTAGACCATGTTTCAC---
TCATCATCAGATAATAAATAAAGCAATTATAATAACAAGATGGATTCACTCATCACCTCTGTTTT------CTCTCTGTA
CAAAGATGAACTTGTGTACTGTGTATCTCATTCAAGGTTTTGGTTACCAGTCGAAATTTCAAGATTTCCCATGATTATCG
TGTATTTCCGTGCCCCTCGATTAATCGCCATACCGAGCAAAAAATATCATTTTTTTAATTTTTTGAATTTAAACACTCGA
TTTACAGTAAAGTATGTAGGATCTAATTAATGCAATAAGAGTTGGTTATGGCATGTTGGTAGCAACCTAGTTTCTGTTTT
GAGAGGTCTCTGTTTTGAATATTCGTTCATTCACTTATTTGAATTCAAAATTCAACTATAAAATTTGCTCGAAATATTCT
CGGTATTTGTCGGTATTTCTCGATAACCGTGGTAACCACATTTATCAGTCCCCCTCAGTTAAATTACCTCATTCGGTAAC
CAAAACCTTGATCTCATTCAGTGGGGAATTTTTTTTTACTACTACTTCTGATTTGATTGGTGAAACCAGAATGTGTGTCG
GCGCGCAGACCGT----------TATACGGATCGTACTTCTTTGCAGGGAAATCTTCA-ATGATTGAGTTCGTCGAAAAA
ATCCTGACCTCTAGAAACAAATCCTGACAA--A--------GAGATTCAGATGATTT-GCCTTGGGAATATCTGAATTTG
ACAGGAAGAGTAGCATAACGGACTAGCCTTTGGTTTCAGTTGCAAGCCACAGCCTCAAACCTGCAACTCCGTCTTCCTCA
CACGCTTCACCAACC----------ATTTCCTCCTTCAACTTGATTCCTCCACCCCTGTCCCTTCCTCCCTCTCTCTTCT
CTTCCTCTCACTATATGTATAGCAGAAAACAATGTGGCCGCTACCCCCGAGTAGAGGCGGCGAAGCCAAGATGTCGTCGC
TGCCTAGCTGCATCTTCCTCCTCACCTCCGTCGCCCTCTCCTTCCTGCCGCACCCGGCGATGTCCTCCACCGTCGCCATC
ATCCGACTCCCTTACGGCGACGATATCATCGCCGAGACCTGCCAGAGATGCGGCGAGAACAACCATAACGTGGACTACGC
TCTCTGCGTCGCTTCCCTCTCGGCAGACCCCTCCAGCCGCGACGCCAGCCTCCACGGGCTCGCCCTCATCTCGGCCAAGC
TGGTGCAGGCAGGGGTGGAGGGCATGGACTCCGGCATTGCAGCACTCCGGGCCAAGGAGGCAACGCAGTCGACAAGGTGG
TCCTGCCTCAACGCCTGCATGGACGTGTTCCGCAACGCCATGGCCGACCTCGACGACGCCATCGCCGCCATCGAGGACGG
GAGGTTCACCGAAGCCAAGACGAAGATGACCGCCACCACCGACGCACCTGTGACCTGCAACGACGAGTTCAAGGAGCAGG
GATTGCAGCCGCCCATGGAAGGGGATAGTCGGCGCCTGTTCCAGCACGCCGTCATCTCCCTCGCCATCATCTCATTACTC
TGAATAACAAATTATTA------AGCAAATGTCACTAGTACATATTGCTCTATTCAGCATACATTGCTCTAT---TCAAG
TATGTA---ATGTGACTCTTTTATCATCTG--------TGTTGCAAGCGACAGAGGATTTATGCAGTATGTATACACATA
TCAAGTTACCTG-TTACAGTCGTGGAAACAAACATGCCAATGTAACTGACATGTTACTTAATCTTCATATCAAGGCAGCT
ACAGAACTAATTTCGCATCTCAAATATATACAACAAAAAAATGCCAAGATGTCTCAGGCAAACTTTTTTATACACATTCA
GCCTTCAAGAATCACGCCGGACCGGTTCACCTCAGACGCTCCAATCACCCTTCGAGATCAACGGTCCACAAATCGTGTTA
CAAGTCATTCTTTGGTTAATTTCAGGCGTGGTACAACGTTCATCGATTGCAGTTCCTGAAAAAGATGGCCAGACGACACA
ATGAGATGGGGTTCACCATATACGACAGGACTCAAGCGTGCAGTAACACTGGTTCTAGAAATAATGTTTCAGAATCTAAT
AAGGTTTCAGAACTACTCCCTCCGTAAAGAAATATAAGAGCGTATAGAGGTATGTATGGGCAACGAAAATTTCTGCAGGT
AGATTTACAAATAAGGTTTTTCAGAGGTGCACAAGCAACTTAAAAGGAGATGAGGGTTATCGGAGCAAC-AAAAATTAGG
CAAACGGTCCAGCTTCATGCCCT-----TAACTAGGAGAGGGTAAGTAAAATCACAAGAAAACACTTAATAATGGTCACG
AAAAGAACCATTCTCGCTTCCCTCTTCCGCAGTACCTGAAACAAAAGCTTGCAGGCATATGGCATGGTCAGTTGGGCCAT
ATTTTCCCCATTTTTGCAGAATGAACAAAATGATATCTTGAGTTTATGGTTGTAGTAGCCCAACAAACCGCATGTTCCGC
AGACCTGGAGAACATGAGCAACCACAAATAAGACAGTCGACAATCTTTCAGAGTTCTCAGACGCAATTATTCTTTGCTTT
TAATGCC
>SNPs
------S-----------S------------------S------------------------------------------
----------------------S-------S--SS-S-SSSSSSSSS-----S--------S------------------
-----------------------------------------------------------S-----------------S--
------------------------------------------------------S-------------------------
--------------------------------------------------------------SSSS--------------
-S-SS-SSSSSSSSS-----------------------------SSSSSSSSSS--------------------------
S-----SS-----------------SSSS-----------S-S-------------------SSS--------------S
-----S-------SS--S-----SSSSSSSS----------------------------------S--------------
---------S-------------------------------------------------------S--------------
----------------------------S---------------------------------------------------
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----------------------------------SS----------S--SS-SS--------------------------
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-----------------------------SS--------------------------S----------------------
--------------S----------------------------------------S------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------S------S----------
-S--S---S-----------------S---S---------S----------S--------------------S-------
-----------------------S-----------------------------------------S--------------
---S-----------------S---------S--S-----------SS---------------S----------------
------S---S---------------------------------------------------------------------
--------------------S-----------S----------S---------------------------------S--
S--S--SS-S--S-------S-------S----------------S--S-------------------------------
--------------------------S-S------------------------------------------------S--
----S------------SSSS--------S-----S----------------------------S---S---SSS-----
------SSS---------------------SSS-------------S----------SSS--------------------
------------S-------------------------------S---S----------------SS-------------
---------S----------------------S------------S--------S--S------------S---------
----------------------------S-----------------------------------S---------------
-------------------------------S----S---------S-------------------------S-------
------SSSS----------S--------S---------S----------------------------------------
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S-----------------------------------------------S--------------------S----------
-------S-----S-----S---SSSSS------------------S---------------------------------
------------------------------S-------------------------------------------------
S-------------------------------------------------------------------------------
-------------S--------------------S----------------------S-----------S----------
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>forward_1416
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------------------------------------CAGTTGCAAGCCACAGCCTA------------------------
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>reverse_2287
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----------------------------------------------TCGACAGAGGAAGCATGCAG--------------
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